Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0979
(578 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 250 4e-67
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 248 2e-66
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 99 1e-21
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 93 2e-19
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 93 2e-19
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 79 2e-15
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 71 6e-13
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 71 8e-13
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 49 2e-06
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 44 6e-05
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 44 6e-05
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 34 0.084
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 34 0.084
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 34 0.084
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 34 0.084
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 34 0.084
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 34 0.084
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 34 0.084
U58753-1|AAC24437.2| 814|Caenorhabditis elegans Hypothetical pr... 32 0.26
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 30 1.0
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 30 1.0
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 30 1.0
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 30 1.0
U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical pr... 30 1.0
AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion transpo... 30 1.0
AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion transpo... 30 1.0
AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate perme... 30 1.0
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 30 1.4
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 30 1.4
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 30 1.4
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 30 1.4
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 30 1.4
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 29 1.8
AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical... 29 1.8
U29244-11|AAC71092.1| 201|Caenorhabditis elegans Hypothetical p... 29 2.4
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z75527-4|CAA99779.2| 316|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 29 3.2
DQ178236-1|ABA18178.1| 316|Caenorhabditis elegans putative low ... 29 3.2
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 28 5.5
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 28 5.5
AF016417-1|AAK68335.1| 241|Caenorhabditis elegans Hypothetical ... 28 5.5
AC024881-5|AAK71415.1| 668|Caenorhabditis elegans Na/ca exchang... 28 5.5
U64837-9|AAB04843.2| 309|Caenorhabditis elegans Hypothetical pr... 27 7.3
U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical pr... 27 7.3
U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical pr... 27 7.3
D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein. 27 7.3
D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein. 27 7.3
AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical ... 27 7.3
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 27 9.6
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z68159-4|CAA92285.1| 323|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z50027-2|CAA90335.1| 188|Caenorhabditis elegans Hypothetical pr... 27 9.6
U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical pr... 27 9.6
U40797-14|AAB37544.2| 200|Caenorhabditis elegans Hypothetical p... 27 9.6
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 27 9.6
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 27 9.6
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 250 bits (613), Expect = 4e-67
Identities = 117/172 (68%), Positives = 143/172 (83%)
Frame = +2
Query: 59 QFKLFTMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDL 238
QF P + +E R KA YR+KL E +++E +LK+ R + ++TKQ+DKSEND+
Sbjct: 5 QFSNMVEPTGPAIVEDERTKALNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDI 64
Query: 239 KALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTI 418
K+LQSVGQIVGEVLKQL+EEKFIVKATNGPRYVVGCRR ++K +LK GTRV+LDMTTLTI
Sbjct: 65 KSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTI 124
Query: 419 MRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
MR LPREVDPLVY MSHEDPG+++YS +GGL EQIR+LREV+ELPL+NPELF
Sbjct: 125 MRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELF 176
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 248 bits (607), Expect = 2e-66
Identities = 115/165 (69%), Positives = 141/165 (85%)
Frame = +2
Query: 80 PASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVG 259
P + +E R KA YR+KL E +++E +LK+ R + ++TKQ+DKSEND+K+LQSVG
Sbjct: 4 PTGPAIVEDERTKALNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVG 63
Query: 260 QIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPRE 439
QIVGEVLKQL+EEKFIVKATNGPRYVVGCRR ++K +LK GTRV+LDMTTLTIMR LPRE
Sbjct: 64 QIVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPRE 123
Query: 440 VDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
VDPLVY MSHEDPG+++YS +GGL EQIR+LREV+ELPL+NPELF
Sbjct: 124 VDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELF 168
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 99 bits (238), Expect = 1e-21
Identities = 55/149 (36%), Positives = 86/149 (57%)
Frame = +2
Query: 128 DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFI 307
D ++K+ + + RL+ R++L + + +L+ L G VGEV K + ++K +
Sbjct: 40 DAQQKVADKSQNVRRLQAQRNELNTKVRML---KEELQQLHEQGSYVGEVSKAMDKKKVL 96
Query: 308 VKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDV 487
VK +YVV + +D N L G RVAL + + + LP +VDPLV M E D
Sbjct: 97 VKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKVPDS 156
Query: 488 TYSAIGGLQEQIRQLREVIELPLMNPELF 574
TY +GGL +QI++++EVIELP+ +PELF
Sbjct: 157 TYEMVGGLDKQIKEIKEVIELPVKHPELF 185
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 92.7 bits (220), Expect = 2e-19
Identities = 51/128 (39%), Positives = 72/128 (56%)
Frame = +2
Query: 191 QLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNK 370
Q K+L + + ++ L G VGEV K + ++K +VK +Y+V +D +
Sbjct: 53 QQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDIST 112
Query: 371 LKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIEL 550
L GTRVAL I LP +VDPLV M E D TY +GGL QI++++EVIEL
Sbjct: 113 LAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIEL 172
Query: 551 PLMNPELF 574
P+ +PELF
Sbjct: 173 PVKHPELF 180
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 92.7 bits (220), Expect = 2e-19
Identities = 51/128 (39%), Positives = 72/128 (56%)
Frame = +2
Query: 191 QLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNK 370
Q K+L + + ++ L G VGEV K + ++K +VK +Y+V +D +
Sbjct: 74 QQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDIST 133
Query: 371 LKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIEL 550
L GTRVAL I LP +VDPLV M E D TY +GGL QI++++EVIEL
Sbjct: 134 LAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIEL 193
Query: 551 PLMNPELF 574
P+ +PELF
Sbjct: 194 PVKHPELF 201
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 79.4 bits (187), Expect = 2e-15
Identities = 41/128 (32%), Positives = 73/128 (57%)
Frame = +2
Query: 191 QLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNK 370
+ ++L K+ ++ ++K +QSV ++G+ L+ + + IV +T G Y V LD+
Sbjct: 60 ETRNLEKELLHAQEEVKRIQSVPLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDREL 119
Query: 371 LKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIEL 550
LK G VAL + ++ LP E D + + ++ D++Y IGGL Q +++RE +EL
Sbjct: 120 LKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVEL 179
Query: 551 PLMNPELF 574
PL + EL+
Sbjct: 180 PLTHGELY 187
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 70.9 bits (166), Expect = 6e-13
Identities = 33/95 (34%), Positives = 55/95 (57%)
Frame = +2
Query: 293 EEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHE 472
+ ++++ ++VV + ++ G RV +D I LP ++DP V M E
Sbjct: 110 DPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVE 169
Query: 473 DPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFV 577
+ DVTYS +GG ++QI +LREV+E PL++PE +V
Sbjct: 170 EKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYV 204
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 70.5 bits (165), Expect = 8e-13
Identities = 36/146 (24%), Positives = 76/146 (52%)
Frame = +2
Query: 137 KKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKA 316
+++ ++ +E + +++LK ++ ++ + L+ VG + + + ++ IV
Sbjct: 69 ERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVST 128
Query: 317 TNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYS 496
G + V +DK +L+ G V L+ ++ L + DP+V M E TY+
Sbjct: 129 NVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYA 188
Query: 497 AIGGLQEQIRQLREVIELPLMNPELF 574
+GGL +QI++++E +ELPL +PE +
Sbjct: 189 DVGGLDQQIQEIKEAVELPLTHPEYY 214
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/91 (29%), Positives = 47/91 (51%)
Frame = +2
Query: 305 IVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGD 484
++K + Y + +D ++LK G V ++ + I+ LP E D V M ++
Sbjct: 114 VIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPT 173
Query: 485 VTYSAIGGLQEQIRQLREVIELPLMNPELFV 577
YS IGG +QI++L E + LP+ + + FV
Sbjct: 174 EQYSDIGGCDKQIQELIEAVVLPMTHKDRFV 204
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +2
Query: 437 EVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
E DP+ E D+ Y +GG+++Q+ Q++E++ELPL +P+LF
Sbjct: 191 EGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLF 236
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +2
Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELFV 577
+ T+S IGGLQ R+L+E+++ P+ +PE ++
Sbjct: 479 NTTWSDIGGLQNVKRELQELVQYPVEHPEKYL 510
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +2
Query: 437 EVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
E DP+ E +V Y +GG+++Q+ Q++E++ELPL +P+LF
Sbjct: 190 EGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLF 235
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +2
Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELFV 577
+ T+S IGGLQ R+L+E+++ P+ +PE ++
Sbjct: 478 NTTWSDIGGLQNVKRELQELVQYPVEHPEKYL 509
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +2
Query: 437 EVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
E DP+ E +V Y +GG+++Q+ Q++E++ELPL +P+LF
Sbjct: 190 EGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLF 235
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +2
Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELFV 577
+ T+S IGGLQ R+L+E+++ P+ +PE ++
Sbjct: 478 NTTWSDIGGLQNVKRELQELVQYPVEHPEKYL 509
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 37.5 bits (83), Expect = 0.007
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Frame = +2
Query: 197 KDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPR--YVVGCRRQLDKNK 370
+ L Q + + +++L+ + V + +EK V G R + V +DK+
Sbjct: 76 RPLAVQKRREQQLVQSLRGTPTTLARVHELFDDEKHAVVVVEGSRREWYVPILSIVDKDL 135
Query: 371 LKGGTRVALDMTTL------TIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQL 532
L+ V + + I+ L ++D E T+ IGG + QI++L
Sbjct: 136 LRLNALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQEL 195
Query: 533 REVIELPLMNPELF 574
+E +ELPL +PE +
Sbjct: 196 KESVELPLTHPEYY 209
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 33.9 bits (74), Expect = 0.084
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +2
Query: 356 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 535
+ + +L+ + +D T ++DP+ + S V + +GGL I+ L+
Sbjct: 351 MTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSS------VGFDQVGGLGHHIQSLK 404
Query: 536 EVIELPLMNPELF 574
EV+ P++ PE+F
Sbjct: 405 EVVLFPMLYPEVF 417
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 33.9 bits (74), Expect = 0.084
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +2
Query: 356 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 535
+ + +L+ + +D T ++DP+ + S V + +GGL I+ L+
Sbjct: 349 MTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSS------VGFDQVGGLGHHIQSLK 402
Query: 536 EVIELPLMNPELF 574
EV+ P++ PE+F
Sbjct: 403 EVVLFPMLYPEVF 415
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 33.9 bits (74), Expect = 0.084
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +2
Query: 356 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 535
+ + +L+ + +D T ++DP+ + S V + +GGL I+ L+
Sbjct: 351 MTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSS------VGFDQVGGLGHHIQSLK 404
Query: 536 EVIELPLMNPELF 574
EV+ P++ PE+F
Sbjct: 405 EVVLFPMLYPEVF 417
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 33.9 bits (74), Expect = 0.084
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +2
Query: 356 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 535
+ + +L+ + +D T ++DP+ + S V + +GGL I+ L+
Sbjct: 351 MTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSS------VGFDQVGGLGHHIQSLK 404
Query: 536 EVIELPLMNPELF 574
EV+ P++ PE+F
Sbjct: 405 EVVLFPMLYPEVF 417
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 33.9 bits (74), Expect = 0.084
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +2
Query: 356 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 535
+ + +L+ + +D T ++DP+ + S V + +GGL I+ L+
Sbjct: 349 MTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSS------VGFDQVGGLGHHIQSLK 402
Query: 536 EVIELPLMNPELF 574
EV+ P++ PE+F
Sbjct: 403 EVVLFPMLYPEVF 415
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 33.9 bits (74), Expect = 0.084
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +2
Query: 356 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 535
+ + +L+ + +D T ++DP+ + S V + +GGL I+ L+
Sbjct: 351 MTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSS------VGFDQVGGLGHHIQSLK 404
Query: 536 EVIELPLMNPELF 574
EV+ P++ PE+F
Sbjct: 405 EVVLFPMLYPEVF 417
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 33.9 bits (74), Expect = 0.084
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +2
Query: 356 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 535
+ + +L+ + +D T ++DP+ + S V + +GGL I+ L+
Sbjct: 351 MTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSS------VGFDQVGGLGHHIQSLK 404
Query: 536 EVIELPLMNPELF 574
EV+ P++ PE+F
Sbjct: 405 EVVLFPMLYPEVF 417
>U58753-1|AAC24437.2| 814|Caenorhabditis elegans Hypothetical
protein W03B1.2 protein.
Length = 814
Score = 32.3 bits (70), Expect = 0.26
Identities = 15/39 (38%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 188 DQLKDLTKQYDKSENDLKALQSVGQIVGEVL-KQLTEEK 301
++LKDL YDK +D +AL+ +G+ + + L K++ EE+
Sbjct: 711 EKLKDLVNNYDKDVDDEEALKKLGKEIKKFLAKEIGEER 749
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 134 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQS-VGQIVGEVLKQLTEEKFIV 310
+K L+E +ESRLKE Q +L +K + KAL+ + ++ ++ K +V
Sbjct: 977 QKLLLEKNSIESRLKELEAQGLELEDSGNKLSKEKKALEERCEDLSSRLIDEVERSKQLV 1036
Query: 311 KA 316
KA
Sbjct: 1037 KA 1038
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 134 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQS-VGQIVGEVLKQLTEEKFIV 310
+K L+E +ESRLKE Q +L +K + KAL+ + ++ ++ K +V
Sbjct: 977 QKLLLEKNSIESRLKELEAQGLELEDSGNKLSKEKKALEERCEDLSSRLIDEVERSKQLV 1036
Query: 311 KA 316
KA
Sbjct: 1037 KA 1038
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 134 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQS-VGQIVGEVLKQLTEEKFIV 310
+K L+E +ESRLKE Q +L +K + KAL+ + ++ ++ K +V
Sbjct: 977 QKLLLEKNSIESRLKELEAQGLELEDSGNKLSKEKKALEERCEDLSSRLIDEVERSKQLV 1036
Query: 311 KA 316
KA
Sbjct: 1037 KA 1038
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 95 DMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKAL-QSVGQIVG 271
D+E E+ Q +K L++ V+ RL+ ++L +L YDK + + L + V +
Sbjct: 953 DLEEQLEQEEQARQKLLLDKTNVDQRLRNLEERLVELQDAYDKLLKEKRLLEEKVEGLTT 1012
Query: 272 EVLKQLTEEKFIVKA 316
++L K VKA
Sbjct: 1013 QLLDHEERAKHGVKA 1027
>U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical
protein C17G10.2 protein.
Length = 419
Score = 30.3 bits (65), Expect = 1.0
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 65 KLFTMPASTSDMEPLR--EKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDL 238
K+F TSD L EK F D + L K VE LKE RD+ K ++ ++E+
Sbjct: 195 KIFAFTKETSDTPDLTDDEKKFIDQLETLRV-KSVELSLKEERDKRKSRAEERKETESKK 253
Query: 239 KALQSV 256
+ L ++
Sbjct: 254 QLLDAL 259
>AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion
transporter SULP-1b protein.
Length = 729
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 397 KGNSCSSFKLVLVKLPTTANNVARAISSFY 308
+G+ C S V + LP T +NV R + FY
Sbjct: 207 RGHDCKSTSAVGILLPNTTDNVKRVLQCFY 236
>AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion
transporter SULP-1a protein.
Length = 729
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 397 KGNSCSSFKLVLVKLPTTANNVARAISSFY 308
+G+ C S V + LP T +NV R + FY
Sbjct: 207 RGHDCKSTSAVGILLPNTTDNVKRVLQCFY 236
>AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate permease
family protein 1 protein.
Length = 729
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 397 KGNSCSSFKLVLVKLPTTANNVARAISSFY 308
+G+ C S V + LP T +NV R + FY
Sbjct: 207 RGHDCKSTSAVGILLPNTTDNVKRVLQCFY 236
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 29.9 bits (64), Expect = 1.4
Identities = 27/88 (30%), Positives = 41/88 (46%)
Frame = +2
Query: 116 KAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTE 295
KA +Y K L + +E E +K+L K + EN K LQSV ++VGE+ +
Sbjct: 2989 KANLEYSKILEKIAPLEG---EKNKLVKNLKKAEKQMENLSKGLQSVDEVVGEL-----K 3040
Query: 296 EKFIVKATNGPRYVVGCRRQLDKNKLKG 379
KF V + V R+ D ++ G
Sbjct: 3041 RKFEVLMKEATQIKVDLDREQDTIRIAG 3068
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 149 EHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 250
E ++E R++E D+L + + DK+END+ L+
Sbjct: 1096 EKDDLERRIRELEDELSQIGRGNDKTENDITELK 1129
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 149 EHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 250
E ++E R++E D+L + + DK+END+ L+
Sbjct: 1169 EKDDLERRIRELEDELSQIGRGNDKTENDITELK 1202
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 149 EHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 250
E ++E R++E D+L + + DK+END+ L+
Sbjct: 1169 EKDDLERRIRELEDELSQIGRGNDKTENDITELK 1202
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/74 (24%), Positives = 37/74 (50%)
Frame = +2
Query: 101 EPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVL 280
E +EK ++ +KL+ ++ +KE +++K ++ K E LKA + ++ E +
Sbjct: 885 EKCKEKEAEEENEKLIPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVEKEKV 944
Query: 281 KQLTEEKFIVKATN 322
K E+ + K N
Sbjct: 945 KAEEEKVKVEKERN 958
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/52 (21%), Positives = 27/52 (51%)
Frame = +2
Query: 419 MRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
++H + L+ + ++ ++ + GL+ + LRE++ LP P++F
Sbjct: 291 LKHFDENIISLIESEIMSVNNEIGWADVAGLEGAKKALREIVVLPFKRPDVF 342
>AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical
protein Y41D4B.11 protein.
Length = 349
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/87 (22%), Positives = 46/87 (52%)
Frame = +2
Query: 134 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVK 313
RKK E +E+E+++KE R + + ++ ++ E + ++ + + E L++ EE+ +
Sbjct: 142 RKKEQEKREIENKIKEARKKREQEARRLEEVEKLKEQKKAEKRKMKEALEKEEEEESFDE 201
Query: 314 ATNGPRYVVGCRRQLDKNKLKGGTRVA 394
+ R +++K+ KGG+ A
Sbjct: 202 DEVSEK-----RAKIEKSTEKGGSEKA 223
>U29244-11|AAC71092.1| 201|Caenorhabditis elegans Hypothetical
protein ZK1248.11 protein.
Length = 201
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 92 SDMEPLREKAFQD-YRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 250
SD P EKA ++ Y K HK V+ + +D +K + + EN+++ +Q
Sbjct: 77 SDEVP-NEKALEELYEKAKKTHKNVKGERQYFKDIIKSIRDESKNDENEMEVMQ 129
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 128 DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIV 268
D + E KE E L E + + +D + K +N+L G+I+
Sbjct: 776 DMAPVIQERKEAEHTLAEIQKETRDFASKSQKLQNELSKYDDAGEIL 822
Score = 27.9 bits (59), Expect = 5.5
Identities = 18/77 (23%), Positives = 40/77 (51%)
Frame = +2
Query: 107 LREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQ 286
L+++ ++Y K EVE +++E RD+++ + ++ DL A + E +++
Sbjct: 290 LQDETKKEYAKNRAARTEVEKKIQEFRDEVEVQDAEIAEAREDLDAKKRKVLEFEEKIRE 349
Query: 287 LTEEKFIVKATNGPRYV 337
E+ I K T+ +Y+
Sbjct: 350 C--EQSIRKKTSEKKYM 364
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 86 STSDMEPLREKAFQDYRKKLMEHKEVE-SRLKEGRDQLKDLTKQYDKSENDLKALQSVGQ 262
++ D + REK + +++ +++ K+ +RLK + + ++K+Y++ E K + Q
Sbjct: 300 ASEDSDDAREK--RAFKQMMLDKKQAYLARLKRWESRERQMSKRYEREERKEKDRKKTLQ 357
Query: 263 IVGEVLKQLTEE 298
G+ LK E+
Sbjct: 358 KEGKRLKLFLED 369
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 86 STSDMEPLREKAFQDYRKKLMEHKEVE-SRLKEGRDQLKDLTKQYDKSENDLKALQSVGQ 262
++ D + REK + +++ +++ K+ +RLK + + ++K+Y++ E K + Q
Sbjct: 300 ASEDSDDAREK--RAFKQMMLDKKQAYLARLKRWESRERQMSKRYEREERKEKDRKKTLQ 357
Query: 263 IVGEVLKQLTEE 298
G+ LK E+
Sbjct: 358 KEGKRLKLFLED 369
>Z75551-3|CAA99936.2| 547|Caenorhabditis elegans Hypothetical
protein W04D2.6b protein.
Length = 547
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 86 STSDMEPLREKAFQDYRKKLMEHKEVE-SRLKEGRDQLKDLTKQYDKSENDLKALQSVGQ 262
++ D + REK + +++ +++ K+ +RLK + + ++K+Y++ E K + Q
Sbjct: 142 ASEDSDDAREK--RAFKQMMLDKKQAYLARLKRWESRERQMSKRYEREERKEKDRKKTLQ 199
Query: 263 IVGEVLKQLTEE 298
G+ LK E+
Sbjct: 200 KEGKRLKLFLED 211
>Z75527-4|CAA99779.2| 316|Caenorhabditis elegans Hypothetical
protein C15C8.4 protein.
Length = 316
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 122 FQDYRKKLMEHKEVESRLKEGRDQL-KDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEE 298
F+ KK+ HKE SRL+E ++ KD ++ Y+ E +K + + + L++ EE
Sbjct: 251 FESQLKKIEFHKEEVSRLQEDAEERGKDKSQVYENLELSIKH-EKLNR-KARKLEKYIEE 308
Query: 299 KFIV 310
K I+
Sbjct: 309 KIII 312
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
protein W08D2.7 protein.
Length = 1026
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = +2
Query: 134 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSV 256
R+K +E + +E+ RD +KDL KQ+++ ++ +K L ++
Sbjct: 781 REKSLEGR-LETHSMTKRDNMKDLKKQFEQKQDAVKELNAL 820
>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 128 DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIV 268
D + E KE E L E + + +D + K +N+L G+I+
Sbjct: 776 DMAPVIQERKEAEHTLAEIQKETRDFASKSQKLQNELSKYDDAGEIL 822
Score = 27.9 bits (59), Expect = 5.5
Identities = 18/77 (23%), Positives = 40/77 (51%)
Frame = +2
Query: 107 LREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQ 286
L+++ ++Y K EVE +++E RD+++ + ++ DL A + E +++
Sbjct: 290 LQDETKKEYAKNRAARTEVEKKIQEFRDEVEVQDAEIAEAREDLDAKKRKVLEFEEKIRE 349
Query: 287 LTEEKFIVKATNGPRYV 337
E+ I K T+ +Y+
Sbjct: 350 C--EQSIRKKTSEKKYM 364
>DQ178236-1|ABA18178.1| 316|Caenorhabditis elegans putative low
density lipoproteinreceptor associated protein (37.4 kD)
protein.
Length = 316
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 122 FQDYRKKLMEHKEVESRLKEGRDQL-KDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEE 298
F+ KK+ HKE SRL+E ++ KD ++ Y+ E +K + + + L++ EE
Sbjct: 251 FESQLKKIEFHKEEVSRLQEDAEERGKDKSQVYENLELSIKH-EKLNR-KARKLEKYIEE 308
Query: 299 KFIV 310
K I+
Sbjct: 309 KIII 312
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 128 DYRKKLMEHKE-VESRLKEGRDQLKDLTKQYDKSENDLKALQS 253
+++ K+ E KE +E +KE DQ+ +L +Q++ + LQS
Sbjct: 998 EWKAKIEEEKEQLEQHVKELEDQVAELMEQHETHFRQAQLLQS 1040
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +2
Query: 95 DMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKAL 247
D E RE+ DY K+ + KE + ++ + + K++ K+++K + + +
Sbjct: 194 DYERDRERRKDDYEKEKSKRKESDRDNEKEKQREKEVEKEHEKDRKEKRKI 244
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein
F36F2.3a protein.
Length = 1128
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +2
Query: 95 DMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKAL 247
D E RE+ DY K+ + KE + ++ + + K++ K+++K + + +
Sbjct: 959 DYERDRERRKDDYEKEKSKRKESDRDNEKEKQREKEVEKEHEKDRKEKRKI 1009
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 113 EKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEN 232
E+A Q Y +K +KE E + +E + +LKD+ K+ + ++N
Sbjct: 252 ERAQQHYMQK---YKESEQKRREEKRKLKDMEKECNDAKN 288
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 113 EKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEN 232
E+A Q Y +K +KE E + +E + +LKD+ K+ + ++N
Sbjct: 187 ERAQQHYMQK---YKESEQKRREEKRKLKDMEKECNDAKN 223
>AF016417-1|AAK68335.1| 241|Caenorhabditis elegans Hypothetical
protein F17A9.3 protein.
Length = 241
Score = 27.9 bits (59), Expect = 5.5
Identities = 24/91 (26%), Positives = 46/91 (50%)
Frame = +2
Query: 161 VESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVV 340
V + LK +DQ+KD+ + +N+ A +S Q +++ E++ +AT+ R +
Sbjct: 103 VRNELKRKKDQVKDVAYWERRRKNNDAAKRSRDQ------RRMKEDEMAHRATSLERENM 156
Query: 341 GCRRQLDKNKLKGGTRVALDMTTLTIMRHLP 433
R +LD+ + + AL +TT T +P
Sbjct: 157 LLRVELDQLRAETDKLRALILTTPTTSISIP 187
>AC024881-5|AAK71415.1| 668|Caenorhabditis elegans Na/ca exchangers
protein 10 protein.
Length = 668
Score = 27.9 bits (59), Expect = 5.5
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -2
Query: 271 SNYLSNTL*GFQIIFTLVILFG-QIF*LVTTFFES*LDFLMLHEFLSVILEGLFS*RLHV 95
+ Y+S+ L GF + FT+ L G QI ++T + + FL + F S+I +F R V
Sbjct: 581 TTYISDLLIGFGLPFTIACLQGKQIDLIITPVYRLLMLFLAISLFTSLI--AIFVQRFKV 638
Query: 94 R 92
R
Sbjct: 639 R 639
>U64837-9|AAB04843.2| 309|Caenorhabditis elegans Hypothetical
protein T27E4.1 protein.
Length = 309
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -2
Query: 337 NVARAISSFYNKFFFCELF-QDFSNYL 260
NV RA ++ YN+FF C++ ++F N L
Sbjct: 99 NVVRASTTIYNEFFTCKVAPREFKNTL 125
>U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical
protein C35D10.7b protein.
Length = 486
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 137 KKLMEHKEVESRLKEGRDQ-LKDLTKQYDKSE 229
KKL++HK E L +GR+ +K L + K E
Sbjct: 107 KKLLQHKNAEKLLNDGREVFIKTLEEHNQKKE 138
>U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical
protein C35D10.7a protein.
Length = 537
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 137 KKLMEHKEVESRLKEGRDQ-LKDLTKQYDKSE 229
KKL++HK E L +GR+ +K L + K E
Sbjct: 158 KKLLQHKNAEKLLNDGREVFIKTLEEHNQKKE 189
>D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 27.5 bits (58), Expect = 7.3
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 98 MEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEV 277
+E EKA Q + + V SRLKE + + + K + ++ L+ + E
Sbjct: 179 LEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDRLEDELLLEKER 238
Query: 278 LKQLTEE 298
++ LTEE
Sbjct: 239 VRNLTEE 245
>D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 27.5 bits (58), Expect = 7.3
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 98 MEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEV 277
+E EKA Q + + V SRLKE + + + K + ++ L+ + E
Sbjct: 179 LEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDRLEDELLLEKER 238
Query: 278 LKQLTEE 298
++ LTEE
Sbjct: 239 VRNLTEE 245
>AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1e protein.
Length = 256
Score = 27.5 bits (58), Expect = 7.3
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 98 MEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEV 277
+E EKA Q + + V SRLKE + + + K + ++ L+ + E
Sbjct: 179 LEVSEEKALQREDSYEEQIRTVSSRLKEAETRAEFAERSVQKLQKEVDRLEDELLLEKER 238
Query: 278 LKQLTEE 298
++ LTEE
Sbjct: 239 VRNLTEE 245
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 27.1 bits (57), Expect = 9.6
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +2
Query: 65 KLFTMPAST---SDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEND 235
K+ P ST SD EP + K M HKEVE + + K +Q + N
Sbjct: 275 KVSIAPVSTNKSSDDEPSTPRVRPQRIKVCMHHKEVEEKSTSEELKAKVAGRQVGQKRNG 334
Query: 236 LKALQSVGQIVGEV-LKQLTEE 298
+ + ++ ++ LK++T++
Sbjct: 335 AQKPEEPKNLLSQIQLKKVTKK 356
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 27.1 bits (57), Expect = 9.6
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +2
Query: 65 KLFTMPAST---SDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEND 235
K+ P ST SD EP + K M HKEVE + + K +Q + N
Sbjct: 275 KVSIAPVSTNKSSDDEPSTPRVRPQRIKVCMHHKEVEEKSTSEELKAKVAGRQVGQKRNG 334
Query: 236 LKALQSVGQIVGEV-LKQLTEE 298
+ + ++ ++ LK++T++
Sbjct: 335 AQKPEEPKNLLSQIQLKKVTKK 356
>Z68159-4|CAA92285.1| 323|Caenorhabditis elegans Hypothetical
protein C33D9.4 protein.
Length = 323
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 376 FKLVLVKLPTTANNVARAISSFYNKFFFCELFQDFSNYLSNTL 248
FK+VL + ++ R I +F + FFC L FS+Y TL
Sbjct: 40 FKIVLTYWKSKNVSMDRHIFTFISINFFCSLSFFFSDYFRITL 82
>Z50027-2|CAA90335.1| 188|Caenorhabditis elegans Hypothetical
protein C39B10.3 protein.
Length = 188
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 155 KEVESRLKEGRDQLKDLTKQYDKSEN---DLKALQSVGQIVGE 274
K+ + L+E RD+ K TK+Y++ E +LK + + G + E
Sbjct: 92 KKYDEELEEKRDENKKATKEYEELEKVAANLKEIMNPGAFMTE 134
>U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical
protein C28G1.4 protein.
Length = 1081
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 134 RKKL-MEHKEVESRLKEGRDQLKDLTKQYDKSEND--LKALQSVGQIVGEVLKQLTEE 298
RKK ++ S +G D L D ++ D E+D ++L S +I +V +++TEE
Sbjct: 18 RKKFTFDYVAAASGKNQGEDDLSDEEEEEDDEEDDDFERSLTSAQRISTKVQEEVTEE 75
>U40797-14|AAB37544.2| 200|Caenorhabditis elegans Hypothetical
protein C28C12.1 protein.
Length = 200
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 80 PASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKD 202
PAS + PL + +K++E K+VE+ K+ + +KD
Sbjct: 41 PASQPALSPLDLTPAKKVEEKVIEEKKVENNPKKEEEPVKD 81
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 128 DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEND 235
D+ + K VE +K ++KDL +Q+ END
Sbjct: 213 DFEVMMKYRKTVEIEMKSVEQRIKDLKEQFVGMEND 248
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 101 EPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKA 244
E +EK ++ +KL+ +E +KE +++K ++ K E LKA
Sbjct: 860 EKRKEKEAEEENEKLIAERERMRAIKEEEERVKAEREKVKKEEERLKA 907
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,341,870
Number of Sequences: 27780
Number of extensions: 243492
Number of successful extensions: 943
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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