BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0979 (578 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 229 8e-61 At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 229 8e-61 At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 99 2e-21 At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 98 4e-21 At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 82 3e-16 At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 82 3e-16 At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 80 1e-15 At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 79 2e-15 At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 78 4e-15 At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 48 6e-06 At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 47 8e-06 At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)... 43 2e-04 At5g03340.1 68418.m00286 cell division cycle protein 48, putativ... 41 5e-04 At3g53230.1 68416.m05865 cell division cycle protein 48, putativ... 41 5e-04 At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 36 0.020 At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochond... 35 0.045 At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochond... 33 0.10 At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 33 0.10 At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 33 0.18 At2g34450.1 68415.m04227 high mobility group (HMG1/2) family pro... 32 0.24 At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 32 0.32 At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 32 0.32 At1g50140.1 68414.m05623 AAA-type ATPase family protein contains... 31 0.42 At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 31 0.42 At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 31 0.73 At5g60070.1 68418.m07532 ankyrin repeat family protein contains ... 30 0.97 At3g49840.1 68416.m05449 proline-rich family protein contains pr... 30 1.3 At2g33793.1 68415.m04145 expressed protein 30 1.3 At3g19670.1 68416.m02492 FF domain-containing protein / WW domai... 29 1.7 At1g51940.1 68414.m05855 protein kinase family protein / peptido... 29 1.7 At3g19740.1 68416.m02499 AAA-type ATPase family protein contains... 29 2.2 At1g78700.1 68414.m09173 brassinosteroid signalling positive reg... 29 2.2 At3g61130.1 68416.m06841 glycosyl transferase family 8 protein c... 29 3.0 At5g53450.2 68418.m06643 protein kinase family protein contains ... 28 3.9 At5g53450.1 68418.m06642 protein kinase family protein contains ... 28 3.9 At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 28 3.9 At3g47460.1 68416.m05161 SMC2-like condensin, putative similar t... 28 3.9 At1g62130.1 68414.m07010 AAA-type ATPase family protein contains... 28 3.9 At5g48660.1 68418.m06022 expressed protein ; expression supporte... 28 5.2 At5g11260.1 68418.m01315 bZIP protein HY5 (HY5) identical to HY5... 28 5.2 At1g68780.1 68414.m07862 leucine-rich repeat family protein cont... 28 5.2 At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR ... 28 5.2 At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 27 6.8 At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zi... 27 6.8 At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zi... 27 6.8 At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 27 6.8 At5g52330.1 68418.m06494 meprin and TRAF homology domain-contain... 27 9.0 At5g47820.2 68418.m05908 kinesin-like protein (FRA1) identical t... 27 9.0 At5g47820.1 68418.m05907 kinesin-like protein (FRA1) identical t... 27 9.0 At4g36150.1 68417.m05145 disease resistance protein (TIR-NBS-LRR... 27 9.0 At2g45550.1 68415.m05664 cytochrome P450 family protein 27 9.0 At2g28650.1 68415.m03483 exocyst subunit EXO70 family protein co... 27 9.0 At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transfera... 27 9.0 At2g16890.1 68415.m01943 UDP-glucoronosyl/UDP-glucosyl transfera... 27 9.0 At1g66120.1 68414.m07504 acyl-activating enzyme 11 (AAE11) simil... 27 9.0 At1g62740.1 68414.m07081 stress-inducible protein, putative simi... 27 9.0 At1g56660.1 68414.m06516 expressed protein 27 9.0 At1g03000.1 68414.m00271 AAA-type ATPase family protein contains... 27 9.0 >At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a) gb|AAF22524.1 Length = 399 Score = 229 bits (561), Expect = 8e-61 Identities = 104/156 (66%), Positives = 133/156 (85%) Frame = +2 Query: 110 REKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQL 289 R A +YRKKL++HKE+ESR++ R+ L+ K+++K+E+DLK+LQSVGQI+GEVL+ L Sbjct: 11 RTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPL 70 Query: 290 TEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSH 469 E+ IVKA++GPRYVVGCR ++DK KL GTRV LDMTTLTIMR LPREVDP+VYNM H Sbjct: 71 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 130 Query: 470 EDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFV 577 EDPG+++YSA+GGL +QIR+LRE IELPLMNPELF+ Sbjct: 131 EDPGNISYSAVGGLGDQIRELRESIELPLMNPELFL 166 >At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit p42D, putative similar to 26S proteasome regulatory complex subunit p42D [Drosophila melanogaster] gi|6434958|gb|AAF08391 Length = 399 Score = 229 bits (561), Expect = 8e-61 Identities = 105/156 (67%), Positives = 132/156 (84%) Frame = +2 Query: 110 REKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQL 289 R A DYRKKL+ HKE+ESR++ R+ L+ K+++K+E+DLK+LQSVGQI+GEVL+ L Sbjct: 11 RTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPL 70 Query: 290 TEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSH 469 E+ IVKA++GPRYVVGCR ++DK KL GTRV LDMTTLTIMR LPREVDP+VYNM H Sbjct: 71 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 130 Query: 470 EDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFV 577 EDPG+++YSA+GGL +QIR+LRE IELPLMNPELF+ Sbjct: 131 EDPGNISYSAVGGLGDQIRELRESIELPLMNPELFL 166 >At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) Length = 419 Score = 99.1 bits (236), Expect = 2e-21 Identities = 57/164 (34%), Positives = 87/164 (53%) Frame = +2 Query: 83 ASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQ 262 A+ E L++ Q + + ++ + L Q +L + +L+ LQ G Sbjct: 24 AAAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGS 83 Query: 263 IVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREV 442 VGEV+K + + K +VK +YVV + +D K+ TRVAL + + LP +V Sbjct: 84 YVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKV 143 Query: 443 DPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELF 574 DPLV M E D TY IGGL +QI++++EVIELP+ +PELF Sbjct: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELF 187 >At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, putative almost identical to 26S proteasome AAA-ATPase subunit RPT6a GI:6652888 from [Arabidopsis thaliana]; almost identical to a member of conserved Sug1 CAD family AtSUG1 GI:13537115 from [Arabidopsis thaliana] Length = 419 Score = 97.9 bits (233), Expect = 4e-21 Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 1/150 (0%) Frame = +2 Query: 128 DYRKKLMEHKEVE-SRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKF 304 D ++L K +RL+ R++L + +L+ LQ G VGEV+K + + K Sbjct: 41 DELQRLQREKSYNLNRLEAQRNELNSRVRML---REELQLLQEPGSYVGEVVKVMGKNKV 97 Query: 305 IVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGD 484 +VK +YVV + +D KL TRVAL + + LP +VDPLV M E D Sbjct: 98 LVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPD 157 Query: 485 VTYSAIGGLQEQIRQLREVIELPLMNPELF 574 TY IGGL +QI++++EVIELP+ +PELF Sbjct: 158 STYDMIGGLDQQIKEIKEVIELPIKHPELF 187 >At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a) almost identical to 26S proteasome AAA-ATPase subunit RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila melanogaster 26S proteasome subunit 4 ATPase, PID:g1066065 Length = 443 Score = 81.8 bits (193), Expect = 3e-16 Identities = 42/146 (28%), Positives = 83/146 (56%) Frame = +2 Query: 137 KKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKA 316 +++ ++ +E +++LK ++ ++ + + L+ VG + + + E IV + Sbjct: 69 ERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSS 128 Query: 317 TNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYS 496 + GP Y VG +DK++L+ G + + L+++ L EVDP+V M E +Y+ Sbjct: 129 SVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYA 188 Query: 497 AIGGLQEQIRQLREVIELPLMNPELF 574 IGGL+ QI++++E +ELPL +PEL+ Sbjct: 189 DIGGLEAQIQEIKEAVELPLTHPELY 214 >At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4, putative similar to Swiss-Prot:P48601 26S protease regulatory subunit 4 (P26S4) [Drosophila melanogaster] Length = 443 Score = 81.8 bits (193), Expect = 3e-16 Identities = 42/146 (28%), Positives = 83/146 (56%) Frame = +2 Query: 137 KKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKA 316 +++ ++ +E +++LK ++ ++ + + L+ VG + + + E IV + Sbjct: 69 ERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSS 128 Query: 317 TNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYS 496 + GP Y VG +DK++L+ G + + L+++ L EVDP+V M E +Y+ Sbjct: 129 SVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYA 188 Query: 497 AIGGLQEQIRQLREVIELPLMNPELF 574 IGGL+ QI++++E +ELPL +PEL+ Sbjct: 189 DIGGLEAQIQEIKEAVELPLTHPELY 214 >At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3) identical to 26S proteasome AAA-ATPase subunit RPT3 GI:6652882 from [Arabidopsis thaliana] Length = 408 Score = 79.8 bits (188), Expect = 1e-15 Identities = 47/166 (28%), Positives = 90/166 (54%) Frame = +2 Query: 77 MPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSV 256 M ST+D E L + R+ +E +++ +D+ K+L ++ +++ ++K +QSV Sbjct: 20 MDLSTADEEDLYGRLKSLERQ--LEFTDIQEEYV--KDEQKNLKRELLRAQEEVKRIQSV 75 Query: 257 GQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPR 436 ++G+ ++ + + IV +T G Y V +++ LK VAL + ++ LP Sbjct: 76 PLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPP 135 Query: 437 EVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELF 574 E D + +S + DV+Y+ IGG Q +++RE +ELPL + EL+ Sbjct: 136 EADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELY 181 >At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, putative similar to 26S proteasome AAA-ATPase subunit RPT1 SP:Q41365 from [Spinacia oleracea] Length = 464 Score = 79.4 bits (187), Expect = 2e-15 Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 1/103 (0%) Frame = +2 Query: 272 EVLKQLTEE-KFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDP 448 +++ TE+ K++V +YVVG + ++ G RV +D I LP ++DP Sbjct: 130 QIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDP 189 Query: 449 LVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFV 577 V M+ E+ D TYS IGG +EQI ++REV+ELP+++PE FV Sbjct: 190 SVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFV 232 >At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a) similar to 26S proteasome ATPase subunit GI:1395190 from [Spinacia oleracea] Length = 426 Score = 78.2 bits (184), Expect = 4e-15 Identities = 37/103 (35%), Positives = 64/103 (62%), Gaps = 1/103 (0%) Frame = +2 Query: 272 EVLKQLTEE-KFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDP 448 +++ TE+ K+++ ++VVG ++ ++ G RV +D I LP ++DP Sbjct: 93 KIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDP 152 Query: 449 LVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFV 577 V M+ E+ DVTY+ +GG +EQI ++REV+ELP+++PE FV Sbjct: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFV 195 >At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a) identical to GB:AAF22525 GI:6652886 from [Arabidopsis thaliana] Length = 424 Score = 47.6 bits (108), Expect = 6e-06 Identities = 26/73 (35%), Positives = 41/73 (56%) Frame = +2 Query: 356 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 535 +D + LK G V ++ + I+ LP E D V M ++ Y+ IGGL++QI++L Sbjct: 125 VDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 184 Query: 536 EVIELPLMNPELF 574 E I LP+ + E F Sbjct: 185 EAIVLPMTHKERF 197 >At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, putative identical to SP:O04019 from [Arabidopsis thaliana] Length = 423 Score = 47.2 bits (107), Expect = 8e-06 Identities = 26/73 (35%), Positives = 41/73 (56%) Frame = +2 Query: 356 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 535 +D + LK G V ++ + I+ LP E D V M ++ Y+ IGGL++QI++L Sbjct: 124 VDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183 Query: 536 EVIELPLMNPELF 574 E I LP+ + E F Sbjct: 184 EAIVLPMTHKEQF 196 >At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A) (CDC48) identical to SP|P54609 Cell division cycle protein 48 homolog {Arabidopsis thaliana} Length = 809 Score = 42.7 bits (96), Expect = 2e-04 Identities = 16/31 (51%), Positives = 26/31 (83%) Frame = +2 Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574 DV Y +GG+++Q+ Q+RE++ELPL +P+LF Sbjct: 203 DVGYDDVGGVRKQMAQIRELVELPLRHPQLF 233 Score = 31.5 bits (68), Expect = 0.42 Identities = 12/31 (38%), Positives = 23/31 (74%) Frame = +2 Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574 +V+++ IGGL+ R+L+E ++ P+ +PE F Sbjct: 476 NVSWNDIGGLENVKRELQETVQYPVEHPEKF 506 >At5g03340.1 68418.m00286 cell division cycle protein 48, putative / CDC48, putative very strong similarity to SP|P54609 Cell division cycle protein 48 homolog {Arabidopsis thaliana}; contains Pfam profiles PF00004: ATPase AAA family, PF02359: Cell division protein 48 (CDC48) N-terminal domain; supporting cDNA gi|26449351|dbj|AK117125.1| Length = 810 Score = 41.1 bits (92), Expect = 5e-04 Identities = 15/31 (48%), Positives = 26/31 (83%) Frame = +2 Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574 +V Y +GG+++Q+ Q+RE++ELPL +P+LF Sbjct: 203 EVGYDDVGGVRKQMAQIRELVELPLRHPQLF 233 Score = 31.1 bits (67), Expect = 0.56 Identities = 12/31 (38%), Positives = 22/31 (70%) Frame = +2 Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574 +V++ IGGL+ R+L+E ++ P+ +PE F Sbjct: 476 NVSWEDIGGLENVKRELQETVQYPVEHPEKF 506 >At3g53230.1 68416.m05865 cell division cycle protein 48, putative / CDC48, putative very strong similarity to SP|P54609 Cell division cycle protein 48 homolog {Arabidopsis thaliana}; contains Pfam profiles PF00004: ATPase AAA family, PF02359: Cell division protein 48 (CDC48) N-terminal domain Length = 815 Score = 41.1 bits (92), Expect = 5e-04 Identities = 15/31 (48%), Positives = 26/31 (83%) Frame = +2 Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574 +V Y +GG+++Q+ Q+RE++ELPL +P+LF Sbjct: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLF 234 Score = 31.1 bits (67), Expect = 0.56 Identities = 12/31 (38%), Positives = 22/31 (70%) Frame = +2 Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574 +V++ IGGL+ R+L+E ++ P+ +PE F Sbjct: 477 NVSWEDIGGLENVKRELQETVQYPVEHPEKF 507 >At1g05910.1 68414.m00620 cell division cycle protein 48-related / CDC48-related similar to SP|P54609 Cell division cycle protein 48 homolog {Arabidopsis thaliana}; contains Pfam profiles PF00004: ATPase AAA family, PF00439: Bromodomain Length = 1210 Score = 35.9 bits (79), Expect = 0.020 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +2 Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574 D+ + IGGL E I L+E++ PL+ PE F Sbjct: 377 DINFDDIGGLSEYINDLKEMVFFPLLYPEFF 407 >At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochondrial sorting protein, putative similar to Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4) [Saccharomyces cerevisiae]; contains Pfam domain, PF00004: ATPase, AAA family Length = 398 Score = 34.7 bits (76), Expect = 0.045 Identities = 17/44 (38%), Positives = 27/44 (61%) Frame = +2 Query: 443 DPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELF 574 D + ++ + D DV + +IGGL+ + L E++ LPL PELF Sbjct: 67 DVIACDVINPDHIDVEFGSIGGLETIKQALYELVILPLKRPELF 110 >At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochondrial sorting protein, putative similar to Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4) [Saccharomyces cerevisiae]; contains Pfam domain, PF00004: ATPase, AAA family Length = 403 Score = 33.5 bits (73), Expect = 0.10 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +2 Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574 DV + +IGGL+ + L E++ LPL PELF Sbjct: 83 DVEFGSIGGLESIKQALYELVILPLKRPELF 113 >At4g24860.1 68417.m03559 AAA-type ATPase family protein contains Pfam profile PF00004: ATPase, AAA family Length = 1122 Score = 33.5 bits (73), Expect = 0.10 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +2 Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574 DVT+ IG L++ L+E++ LPL PELF Sbjct: 816 DVTFDDIGALEKVKDILKELVMLPLQRPELF 846 >At4g28000.1 68417.m04016 AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family Length = 726 Score = 32.7 bits (71), Expect = 0.18 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = +2 Query: 485 VTYSAIGGLQEQIRQLREVIELPLMNPELF 574 VT++ IG L E L+E++ LPL P+LF Sbjct: 411 VTFADIGSLDETKESLQELVMLPLRRPDLF 440 >At2g34450.1 68415.m04227 high mobility group (HMG1/2) family protein similar to HMG protein [Arabidopsis thaliana] GI:2832361; contains Pfam profile PF00505: HMG (high mobility group) box Length = 151 Score = 32.3 bits (70), Expect = 0.24 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = +2 Query: 194 LKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEK 301 L D KQY + D+K+++ +G+ GE K +T E+ Sbjct: 74 LDDFRKQYQEENPDVKSMREIGKTCGEKWKTMTYEE 109 >At1g64110.2 68414.m07264 AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family Length = 829 Score = 31.9 bits (69), Expect = 0.32 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +2 Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574 +VT+ IG L E L+E++ LPL P+LF Sbjct: 517 NVTFKDIGALDEIKESLQELVMLPLRRPDLF 547 >At1g64110.1 68414.m07263 AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family Length = 824 Score = 31.9 bits (69), Expect = 0.32 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +2 Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574 +VT+ IG L E L+E++ LPL P+LF Sbjct: 512 NVTFKDIGALDEIKESLQELVMLPLRRPDLF 542 >At1g50140.1 68414.m05623 AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family Length = 640 Score = 31.5 bits (68), Expect = 0.42 Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 15/186 (8%) Frame = +2 Query: 62 FKLFTMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLK 241 +KLFT P E + ++K+L E + R+ R + +L K ++ E Sbjct: 201 YKLFTNVMRLHP--PKEEDTLRLFKKQLGEDR----RIVISRSNINELLKALEEHELLCT 254 Query: 242 ALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIM 421 L V G +L + EK I A N Y+ C L K R +L+++ + Sbjct: 255 DLYQVNTD-GVILTKQKAEKAIGWAKN--HYLASCPVPLVKGGRLSLPRESLEISIARLR 311 Query: 422 RHLPREVDPL--VYNMSHED-----------PGD--VTYSAIGGLQEQIRQLREVIELPL 556 + + P + N++ ++ PG+ V + IG L++ + L E++ LP+ Sbjct: 312 KLEDNSLKPSQNLKNIAKDEYERNFVSAVVAPGEIGVKFEDIGALEDVKKALNELVILPM 371 Query: 557 MNPELF 574 PELF Sbjct: 372 RRPELF 377 >At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family; similar to mitochondrial sorting protein 1 (MSP1) (TAT-binding homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae] Length = 1252 Score = 31.5 bits (68), Expect = 0.42 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = +2 Query: 485 VTYSAIGGLQEQIRQLREVIELPLMNPELF 574 V++S IG L+ L+E++ LPL PELF Sbjct: 947 VSFSDIGALENVKDTLKELVMLPLQRPELF 976 >At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family; similar to Spastin (Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment) (Swiss-Prot:Q9QYY8) [Mus musculus]; similar to mitochondrial sorting protein 1 (MSP1) protein (TAT-binding homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae] Length = 1265 Score = 30.7 bits (66), Expect = 0.73 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +2 Query: 485 VTYSAIGGLQEQIRQLREVIELPLMNPELF 574 V++ IG L+ L+E++ LPL PELF Sbjct: 960 VSFDDIGALENVKETLKELVMLPLQRPELF 989 >At5g60070.1 68418.m07532 ankyrin repeat family protein contains ankyrin repeat domains, Pfam:PF00023 Length = 548 Score = 30.3 bits (65), Expect = 0.97 Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Frame = +2 Query: 155 KEVESRLKEGRDQLKD-LTKQYDKSENDLKALQSVG--QIVGEVLKQLTEEKFIVKATNG 325 KE+ S E D+L+D L KQ E L G +V E++K E KA NG Sbjct: 49 KEILSNHMESEDELRDLLRKQNQCGETALYVAAEYGDADVVAELIKYYDLEDAETKARNG 108 Query: 326 --PRYVVGCRRQLDKNKLKGGTRVALDMT 406 P ++ + +LD ++ L MT Sbjct: 109 FDPFHIAAKQGELDVLRVLMEEHPELSMT 137 >At3g49840.1 68416.m05449 proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965 Length = 606 Score = 29.9 bits (64), Expect = 1.3 Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%) Frame = +2 Query: 65 KLFTMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQ-LKDLTKQYDK--SEND 235 KL T+P S SD+ P + R+KL + +E++ KE + LK+L ++ S ++ Sbjct: 383 KLRTVPLSESDIFPSSFHKTPEGRRKLTK-EELQKFTKESTENALKELVSSPEEGSSGSE 441 Query: 236 LKALQSVGQIVGEVLKQLTEEKFIVKATNGP 328 +A + + VGE K+ +++ K N P Sbjct: 442 KQAARGTSEPVGECTKK-KKQRVRYKERNKP 471 >At2g33793.1 68415.m04145 expressed protein Length = 212 Score = 29.9 bits (64), Expect = 1.3 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Frame = +2 Query: 92 SDMEPLREKAFQDYRKKLMEH-KEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIV 268 S ++ REKA +D RKK E V + +K D+LK +K + +N KAL + Sbjct: 45 SALQQFREKAHEDGRKKKEESISSVSTEVKSKIDELK--SKLEKERQNFSKALSKSSKEC 102 Query: 269 GEVLK 283 +LK Sbjct: 103 ENILK 107 >At3g19670.1 68416.m02492 FF domain-containing protein / WW domain-containing protein weak similarity to huntingtin-interacting protein HYPA/FBP11 [Homo sapiens] GI:3341980; contains Pfam profiles PF01846: FF domain, PF00397: WW domain Length = 960 Score = 29.5 bits (63), Expect = 1.7 Identities = 15/49 (30%), Positives = 28/49 (57%) Frame = +2 Query: 86 STSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEN 232 ST E R++ F+DY L KE +R+K+ + +D+ +++DK + Sbjct: 797 STIGDESFRKRCFEDYVSLL---KEQSNRIKQNKKVPEDVREEHDKGRD 842 >At1g51940.1 68414.m05855 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein contains protein kinases ATP-binding region signature, PROSITE:PS00107 Length = 651 Score = 29.5 bits (63), Expect = 1.7 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Frame = -3 Query: 234 SFSLLSYCLVKSFSWSRPSLSLDSTSLCS--MSFFL*SWKAFSLNGSMSDVL 85 +F + L+ SFS S+P D+T LCS ++F ++FS+ SM DVL Sbjct: 4 TFYIFFLSLLPSFSSSKPMNCSDTTRLCSSFLAFKPNQNQSFSVIQSMFDVL 55 >At3g19740.1 68416.m02499 AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family Length = 439 Score = 29.1 bits (62), Expect = 2.2 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = +2 Query: 476 PGD--VTYSAIGGLQEQIRQLREVIELPLMNPELF 574 PG+ V + IG L+ + L E++ LP+ PELF Sbjct: 142 PGEIGVKFDDIGALEHVKKTLNELVILPMRRPELF 176 >At1g78700.1 68414.m09173 brassinosteroid signalling positive regulator-related contains similarity to BZR1 protein [Arabidopsis thaliana] gi|20270971|gb|AAM18490 Length = 325 Score = 29.1 bits (62), Expect = 2.2 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +2 Query: 272 EVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVA 394 EVLK L E + +G Y GC R +++ ++ GG+ A Sbjct: 50 EVLKALCNEAGWIVEPDGTTYRKGCSRPVERMEIGGGSATA 90 >At3g61130.1 68416.m06841 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 8 Length = 673 Score = 28.7 bits (61), Expect = 3.0 Identities = 13/51 (25%), Positives = 30/51 (58%) Frame = +2 Query: 155 KEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFI 307 +E+++RLK+ + L + T D + + L+++GQ++ + QL + K + Sbjct: 245 QELQARLKDSQRVLGEATSDADLPRSAHEKLRAMGQVLAKAKMQLYDCKLV 295 >At5g53450.2 68418.m06643 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 590 Score = 28.3 bits (60), Expect = 3.9 Identities = 21/68 (30%), Positives = 33/68 (48%) Frame = +2 Query: 101 EPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVL 280 E L EK + KK++ KE S L K ++ + + + N + S G ++GEV Sbjct: 489 EGLAEKLETEKWKKVVPFKEFPSSLPVA----KLVSGEIEVTMNMNDHIDSPGSVIGEVR 544 Query: 281 KQLTEEKF 304 KQ+ E F Sbjct: 545 KQIPPEMF 552 >At5g53450.1 68418.m06642 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 670 Score = 28.3 bits (60), Expect = 3.9 Identities = 21/68 (30%), Positives = 33/68 (48%) Frame = +2 Query: 101 EPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVL 280 E L EK + KK++ KE S L K ++ + + + N + S G ++GEV Sbjct: 569 EGLAEKLETEKWKKVVPFKEFPSSLPVA----KLVSGEIEVTMNMNDHIDSPGSVIGEVR 624 Query: 281 KQLTEEKF 304 KQ+ E F Sbjct: 625 KQIPPEMF 632 >At5g48600.1 68418.m06011 structural maintenance of chromosomes (SMC) family protein similar to SP|P50532 Chromosome assembly protein XCAP-C {Xenopus laevis}; contains Pfam profiles PF02483: SMC family C-terminal domain, PF02463: RecF/RecN/SMC N terminal domain Length = 1241 Score = 28.3 bits (60), Expect = 3.9 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 5/74 (6%) Frame = +2 Query: 125 QDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ----SVGQIVGEVLKQLT 292 +D + + K++E +L++ ++ D+TK+ + S N + LQ + +++ + K+L Sbjct: 344 EDLKHVKQKIKKLEDKLEKDSSKIGDMTKESEDSSNLIPKLQENIPKLQKVLLDEEKKLE 403 Query: 293 EEKFIVKA-TNGPR 331 E K I K T G R Sbjct: 404 EIKAIAKVETEGYR 417 >At3g47460.1 68416.m05161 SMC2-like condensin, putative similar to SMC2-like condensin (TITAN3) [Arabidopsis thaliana] GI:14279543; contains Pfam profiles PF02483: SMC family C-terminal domain, PF02463: RecF/RecN/SMC N terminal domain Length = 1171 Score = 28.3 bits (60), Expect = 3.9 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = +2 Query: 137 KKLMEH-KEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVK 313 K + +H K E RLK+ +K L + S DLK ++V + + + +T+E+ +K Sbjct: 773 KSIKDHDKNREGRLKDLEKNIKTLKARIQASSKDLKGHENVRERLVMEQEAVTQEQSYLK 832 Query: 314 A 316 + Sbjct: 833 S 833 >At1g62130.1 68414.m07010 AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family Length = 1025 Score = 28.3 bits (60), Expect = 3.9 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 Query: 485 VTYSAIGGLQEQIRQLREVIELPLMNPELF 574 VT+ IG L+ L+E++ LP PELF Sbjct: 732 VTFDDIGALENVKDTLKELVMLPFQWPELF 761 >At5g48660.1 68418.m06022 expressed protein ; expression supported by MPSS Length = 219 Score = 27.9 bits (59), Expect = 5.2 Identities = 12/53 (22%), Positives = 30/53 (56%) Frame = +2 Query: 92 SDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 250 ++++ EKA ++ ++ ++ + RLK+ + K+ K+ + +E + ALQ Sbjct: 137 TELKEKEEKASKEIKQLQVKLSSITERLKKAETESKEKEKKLETAETHVTALQ 189 >At5g11260.1 68418.m01315 bZIP protein HY5 (HY5) identical to HY5 protein GI:2251085 from [Arabidopsis thaliana] Length = 168 Score = 27.9 bits (59), Expect = 5.2 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +2 Query: 173 LKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEK 301 L E +++KDL + + E L LQ+ Q++ +LK T K Sbjct: 113 LSELENRVKDLENKNSELEERLSTLQNENQMLRHILKNTTGNK 155 >At1g68780.1 68414.m07862 leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to disease resistance protein [Lycopersicon esculentum] gi|3894383|gb|AAC78591 Length = 432 Score = 27.9 bits (59), Expect = 5.2 Identities = 19/59 (32%), Positives = 34/59 (57%) Frame = +2 Query: 395 LDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPEL 571 LD++ + LPRE++ L N++ D + S GGL ++I+++ ++EL L N L Sbjct: 248 LDLSNNYLEGKLPRELESLK-NLTLLDLRNNRLS--GGLSKEIQEMTSLVELVLSNNRL 303 >At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein. Length = 893 Score = 27.9 bits (59), Expect = 5.2 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 3/88 (3%) Frame = +2 Query: 110 REKAFQDYRKKLMEHKEVE-SRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQ 286 R +D L+ ++VE RL R K+LT Y ++ L+ V ++ GEV Sbjct: 75 RVATVEDIIITLLRDRDVEIQRLCLCRFCSKNLTTSYRYGKSVFLRLREVEKLKGEVFGV 134 Query: 287 LTEEKFIVKATNGPRY--VVGCRRQLDK 364 +TE+ P +VG ++ LDK Sbjct: 135 ITEQASTSAFEERPLQPTIVGQKKMLDK 162 >At3g54670.1 68416.m06049 structural maintenance of chromosomes (SMC) family protein similar to SMC1 protein [Bos taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC protein) [Xenopus laevis] GI:3328231; contains Pfam profiles PF02483: SMC family C-terminal domain, PF02463: RecF/RecN/SMC N terminal domain Length = 1257 Score = 27.5 bits (58), Expect = 6.8 Identities = 12/33 (36%), Positives = 22/33 (66%) Frame = +2 Query: 158 EVESRLKEGRDQLKDLTKQYDKSENDLKALQSV 256 ++++R+ E DQL DLT + ++E D + Q+V Sbjct: 478 KLKTRIAELEDQLSDLTAERYENERDSRLTQAV 510 >At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zinc finger domain-containing protein contains Pfam domains PF03469: XH domain, PF03468: XS domain and PF03470: XS zinc finger domain Length = 647 Score = 27.5 bits (58), Expect = 6.8 Identities = 17/55 (30%), Positives = 30/55 (54%) Frame = +2 Query: 137 KKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEK 301 K + E E E+R +E Q +L + ++ + D+K ++ + + E L QL EEK Sbjct: 251 KTIAELTEEEARKQELLVQ--NLRQLVEEKKKDMKEIEELCSVKSEELNQLMEEK 303 >At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zinc finger domain-containing protein contains Pfam domains PF03469: XH domain, PF03468: XS domain and PF03470: XS zinc finger domain Length = 647 Score = 27.5 bits (58), Expect = 6.8 Identities = 17/55 (30%), Positives = 30/55 (54%) Frame = +2 Query: 137 KKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEK 301 K + E E E+R +E Q +L + ++ + D+K ++ + + E L QL EEK Sbjct: 251 KTIAELTEEEARKQELLVQ--NLRQLVEEKKKDMKEIEELCSVKSEELNQLMEEK 303 >At1g64330.1 68414.m07290 myosin heavy chain-related similar to myosin heavy chain (GI:1850913) [Entamoeba histolytica]; similar to Intracellular protein transport protein USO1 (Swiss-Prot:P25386) [Saccharomyces cerevisiae] Length = 555 Score = 27.5 bits (58), Expect = 6.8 Identities = 15/55 (27%), Positives = 28/55 (50%) Frame = +2 Query: 149 EHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVK 313 EH+E+ +LKE + +L + +K ++ K L ++ GE L ++ VK Sbjct: 154 EHQEILKKLKESDEICGNLRVETEKLTSENKELNEKLEVAGETESDLNQKLEDVK 208 >At5g52330.1 68418.m06494 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain Length = 397 Score = 27.1 bits (57), Expect = 9.0 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = +3 Query: 117 RPSRITERNSWSIRKSSQDSKK 182 +PS + +N+W I+K SQ SK+ Sbjct: 13 KPSELYGKNTWKIKKFSQISKR 34 >At5g47820.2 68418.m05908 kinesin-like protein (FRA1) identical to kinesin-like protein [Arabidopsis thaliana] GI:27260890; contains Pfam profile PF00225: Kinesin motor domain Length = 1035 Score = 27.1 bits (57), Expect = 9.0 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 5/141 (3%) Frame = +2 Query: 140 KLMEHKEVESRLKEGRD-QLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKA 316 ++ + E + K R+ +L L K+ KSE + LQ++ Q VL++ TEE A Sbjct: 636 RMKQEAEQFRQWKASREKELLQLRKEGRKSEYERHKLQALNQRQKMVLQRKTEE--AAMA 693 Query: 317 TNGPRYVVGCRRQLDKNKLKGGTRVALDMTT--LTIMRHLPREVDPL--VYNMSHEDPGD 484 T + ++ R+ + G + T ++ R L E++ + V+ + HE Sbjct: 694 TKRLKELLEARKSSPREHSAGTNGFGTNGQTNEKSLQRWLDHELEVMVNVHEVRHEYEKQ 753 Query: 485 VTYSAIGGLQEQIRQLREVIE 547 A L E++ LR+V E Sbjct: 754 SHVRA--ALAEELAVLRQVDE 772 >At5g47820.1 68418.m05907 kinesin-like protein (FRA1) identical to kinesin-like protein [Arabidopsis thaliana] GI:27260890; contains Pfam profile PF00225: Kinesin motor domain Length = 1035 Score = 27.1 bits (57), Expect = 9.0 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 5/141 (3%) Frame = +2 Query: 140 KLMEHKEVESRLKEGRD-QLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKA 316 ++ + E + K R+ +L L K+ KSE + LQ++ Q VL++ TEE A Sbjct: 636 RMKQEAEQFRQWKASREKELLQLRKEGRKSEYERHKLQALNQRQKMVLQRKTEE--AAMA 693 Query: 317 TNGPRYVVGCRRQLDKNKLKGGTRVALDMTT--LTIMRHLPREVDPL--VYNMSHEDPGD 484 T + ++ R+ + G + T ++ R L E++ + V+ + HE Sbjct: 694 TKRLKELLEARKSSPREHSAGTNGFGTNGQTNEKSLQRWLDHELEVMVNVHEVRHEYEKQ 753 Query: 485 VTYSAIGGLQEQIRQLREVIE 547 A L E++ LR+V E Sbjct: 754 SHVRA--ALAEELAVLRQVDE 772 >At4g36150.1 68417.m05145 disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Length = 1179 Score = 27.1 bits (57), Expect = 9.0 Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Frame = +2 Query: 170 RLKEGRDQLKDLTKQYDKSENDLKAL-QSVGQIVGEVLKQLTEE 298 +L + + LKD+ K+ + +++ +S+ QIVGEV+K L+ + Sbjct: 140 KLDKWKQALKDVPKKLGFTLSEMSDEGESINQIVGEVIKVLSSD 183 >At2g45550.1 68415.m05664 cytochrome P450 family protein Length = 511 Score = 27.1 bits (57), Expect = 9.0 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -3 Query: 264 ICPTLCRAFRSFSLLSYCLVKSFSWSRPS 178 ICP L A ++ SL+ L+ SF W P+ Sbjct: 449 ICPGLPLAVKTVSLMLASLLYSFDWKLPN 477 >At2g28650.1 68415.m03483 exocyst subunit EXO70 family protein contains Pfam domain PF03081: Exo70 exocyst complex subunit Length = 573 Score = 27.1 bits (57), Expect = 9.0 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +2 Query: 68 LFTMPASTSDMEPLREKAFQDYRKKLMEH 154 LFT+ ++S L++ + Q + + LMEH Sbjct: 3 LFTLSTTSSSSSKLKQHSHQSFSESLMEH 31 >At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase Length = 478 Score = 27.1 bits (57), Expect = 9.0 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%) Frame = +2 Query: 65 KLFTMPASTSDMEPLREKAFQ-------DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDK 223 +LFT P S SD EP+ F D+ E +E + L+ DQ+K T + Sbjct: 163 ELFTEPESKSDTEPVTVPDFPWIKVKKCDFDHGTTEPEESGAALELSMDQIKSTTTSHGF 222 Query: 224 SENDLKALQS 253 N L+S Sbjct: 223 LVNSFYELES 232 >At2g16890.1 68415.m01943 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase Length = 312 Score = 27.1 bits (57), Expect = 9.0 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%) Frame = +2 Query: 65 KLFTMPASTSDMEPLREKAFQ-------DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDK 223 +LFT P S SD EP+ F D+ E +E + L+ DQ+K T + Sbjct: 163 ELFTEPESKSDTEPVTVPDFPWIKVKKCDFDHGTTEPEESGAALELSMDQIKSTTTSHGF 222 Query: 224 SENDLKALQS 253 N L+S Sbjct: 223 LVNSFYELES 232 >At1g66120.1 68414.m07504 acyl-activating enzyme 11 (AAE11) similar to AMP-binding protein GI:1903034 from [Brassica napus]; contains Pfam AMP-binding domain PF00501; identical to cDNA acyl-activating enzyme 11 (At1g66120) GI:29893230, acyl-activating enzyme 11 [Arabidopsis thaliana] GI:29893231 Length = 572 Score = 27.1 bits (57), Expect = 9.0 Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 3/56 (5%) Frame = +2 Query: 122 FQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSV---GQIVGEVL 280 +QD KL EH+++E + ++G +++LT D + K L+SV G+ +GE++ Sbjct: 345 WQDEWNKLPEHQQIELQQRQG---VRNLTLA-DVDVKNTKTLESVPRDGKTMGEIV 396 >At1g62740.1 68414.m07081 stress-inducible protein, putative similar to sti (stress inducible protein) [Glycine max] GI:872116; contains Pfam profile PF00515 TPR Domain Length = 571 Score = 27.1 bits (57), Expect = 9.0 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%) Frame = +2 Query: 113 EKAFQDYRKKLMEHKEVES--RLKEGRDQLKDLTKQ--YDKSEND 235 E Q Y+K L EH+ E+ RL E K+L +Q YD + D Sbjct: 339 EPVIQTYQKALTEHRNPETLKRLNEAERAKKELEQQEYYDPNIGD 383 >At1g56660.1 68414.m06516 expressed protein Length = 522 Score = 27.1 bits (57), Expect = 9.0 Identities = 16/62 (25%), Positives = 31/62 (50%) Frame = +2 Query: 116 KAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTE 295 K +D +K + K+V+ + +++ KD + K ND+ L++ + E + L E Sbjct: 447 KMTEDEEEKKDDSKDVKIEGSKAKEEKKDKDVKKKKGGNDIGKLKTKLAKIDEKIGALME 506 Query: 296 EK 301 EK Sbjct: 507 EK 508 >At1g03000.1 68414.m00271 AAA-type ATPase family protein contains Pfam domain, PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with diverse cellular 'A'ctivities) Length = 941 Score = 27.1 bits (57), Expect = 9.0 Identities = 9/31 (29%), Positives = 21/31 (67%) Frame = +2 Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574 +V + +GGL++ + + ++LPL++ +LF Sbjct: 654 NVKWDDVGGLEDVKTSILDTVQLPLLHKDLF 684 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,597,406 Number of Sequences: 28952 Number of extensions: 226472 Number of successful extensions: 829 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 796 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 829 length of database: 12,070,560 effective HSP length: 77 effective length of database: 9,841,256 effective search space used: 1131744440 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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