Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0979
(578 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 229 8e-61
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 229 8e-61
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 99 2e-21
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 98 4e-21
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 82 3e-16
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 82 3e-16
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 80 1e-15
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 79 2e-15
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 78 4e-15
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 48 6e-06
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 47 8e-06
At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)... 43 2e-04
At5g03340.1 68418.m00286 cell division cycle protein 48, putativ... 41 5e-04
At3g53230.1 68416.m05865 cell division cycle protein 48, putativ... 41 5e-04
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 36 0.020
At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochond... 35 0.045
At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochond... 33 0.10
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 33 0.10
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 33 0.18
At2g34450.1 68415.m04227 high mobility group (HMG1/2) family pro... 32 0.24
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 32 0.32
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 32 0.32
At1g50140.1 68414.m05623 AAA-type ATPase family protein contains... 31 0.42
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 31 0.42
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 31 0.73
At5g60070.1 68418.m07532 ankyrin repeat family protein contains ... 30 0.97
At3g49840.1 68416.m05449 proline-rich family protein contains pr... 30 1.3
At2g33793.1 68415.m04145 expressed protein 30 1.3
At3g19670.1 68416.m02492 FF domain-containing protein / WW domai... 29 1.7
At1g51940.1 68414.m05855 protein kinase family protein / peptido... 29 1.7
At3g19740.1 68416.m02499 AAA-type ATPase family protein contains... 29 2.2
At1g78700.1 68414.m09173 brassinosteroid signalling positive reg... 29 2.2
At3g61130.1 68416.m06841 glycosyl transferase family 8 protein c... 29 3.0
At5g53450.2 68418.m06643 protein kinase family protein contains ... 28 3.9
At5g53450.1 68418.m06642 protein kinase family protein contains ... 28 3.9
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 28 3.9
At3g47460.1 68416.m05161 SMC2-like condensin, putative similar t... 28 3.9
At1g62130.1 68414.m07010 AAA-type ATPase family protein contains... 28 3.9
At5g48660.1 68418.m06022 expressed protein ; expression supporte... 28 5.2
At5g11260.1 68418.m01315 bZIP protein HY5 (HY5) identical to HY5... 28 5.2
At1g68780.1 68414.m07862 leucine-rich repeat family protein cont... 28 5.2
At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR ... 28 5.2
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 27 6.8
At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zi... 27 6.8
At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zi... 27 6.8
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 27 6.8
At5g52330.1 68418.m06494 meprin and TRAF homology domain-contain... 27 9.0
At5g47820.2 68418.m05908 kinesin-like protein (FRA1) identical t... 27 9.0
At5g47820.1 68418.m05907 kinesin-like protein (FRA1) identical t... 27 9.0
At4g36150.1 68417.m05145 disease resistance protein (TIR-NBS-LRR... 27 9.0
At2g45550.1 68415.m05664 cytochrome P450 family protein 27 9.0
At2g28650.1 68415.m03483 exocyst subunit EXO70 family protein co... 27 9.0
At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transfera... 27 9.0
At2g16890.1 68415.m01943 UDP-glucoronosyl/UDP-glucosyl transfera... 27 9.0
At1g66120.1 68414.m07504 acyl-activating enzyme 11 (AAE11) simil... 27 9.0
At1g62740.1 68414.m07081 stress-inducible protein, putative simi... 27 9.0
At1g56660.1 68414.m06516 expressed protein 27 9.0
At1g03000.1 68414.m00271 AAA-type ATPase family protein contains... 27 9.0
>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
gb|AAF22524.1
Length = 399
Score = 229 bits (561), Expect = 8e-61
Identities = 104/156 (66%), Positives = 133/156 (85%)
Frame = +2
Query: 110 REKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQL 289
R A +YRKKL++HKE+ESR++ R+ L+ K+++K+E+DLK+LQSVGQI+GEVL+ L
Sbjct: 11 RTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPL 70
Query: 290 TEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSH 469
E+ IVKA++GPRYVVGCR ++DK KL GTRV LDMTTLTIMR LPREVDP+VYNM H
Sbjct: 71 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 130
Query: 470 EDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFV 577
EDPG+++YSA+GGL +QIR+LRE IELPLMNPELF+
Sbjct: 131 EDPGNISYSAVGGLGDQIRELRESIELPLMNPELFL 166
>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
p42D, putative similar to 26S proteasome regulatory
complex subunit p42D [Drosophila melanogaster]
gi|6434958|gb|AAF08391
Length = 399
Score = 229 bits (561), Expect = 8e-61
Identities = 105/156 (67%), Positives = 132/156 (84%)
Frame = +2
Query: 110 REKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQL 289
R A DYRKKL+ HKE+ESR++ R+ L+ K+++K+E+DLK+LQSVGQI+GEVL+ L
Sbjct: 11 RTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPL 70
Query: 290 TEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSH 469
E+ IVKA++GPRYVVGCR ++DK KL GTRV LDMTTLTIMR LPREVDP+VYNM H
Sbjct: 71 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 130
Query: 470 EDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFV 577
EDPG+++YSA+GGL +QIR+LRE IELPLMNPELF+
Sbjct: 131 EDPGNISYSAVGGLGDQIRELRESIELPLMNPELFL 166
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 99.1 bits (236), Expect = 2e-21
Identities = 57/164 (34%), Positives = 87/164 (53%)
Frame = +2
Query: 83 ASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQ 262
A+ E L++ Q + + ++ + L Q +L + +L+ LQ G
Sbjct: 24 AAAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGS 83
Query: 263 IVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREV 442
VGEV+K + + K +VK +YVV + +D K+ TRVAL + + LP +V
Sbjct: 84 YVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKV 143
Query: 443 DPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
DPLV M E D TY IGGL +QI++++EVIELP+ +PELF
Sbjct: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELF 187
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 97.9 bits (233), Expect = 4e-21
Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
Frame = +2
Query: 128 DYRKKLMEHKEVE-SRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKF 304
D ++L K +RL+ R++L + +L+ LQ G VGEV+K + + K
Sbjct: 41 DELQRLQREKSYNLNRLEAQRNELNSRVRML---REELQLLQEPGSYVGEVVKVMGKNKV 97
Query: 305 IVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGD 484
+VK +YVV + +D KL TRVAL + + LP +VDPLV M E D
Sbjct: 98 LVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPD 157
Query: 485 VTYSAIGGLQEQIRQLREVIELPLMNPELF 574
TY IGGL +QI++++EVIELP+ +PELF
Sbjct: 158 STYDMIGGLDQQIKEIKEVIELPIKHPELF 187
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 81.8 bits (193), Expect = 3e-16
Identities = 42/146 (28%), Positives = 83/146 (56%)
Frame = +2
Query: 137 KKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKA 316
+++ ++ +E +++LK ++ ++ + + L+ VG + + + E IV +
Sbjct: 69 ERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSS 128
Query: 317 TNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYS 496
+ GP Y VG +DK++L+ G + + L+++ L EVDP+V M E +Y+
Sbjct: 129 SVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYA 188
Query: 497 AIGGLQEQIRQLREVIELPLMNPELF 574
IGGL+ QI++++E +ELPL +PEL+
Sbjct: 189 DIGGLEAQIQEIKEAVELPLTHPELY 214
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 81.8 bits (193), Expect = 3e-16
Identities = 42/146 (28%), Positives = 83/146 (56%)
Frame = +2
Query: 137 KKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKA 316
+++ ++ +E +++LK ++ ++ + + L+ VG + + + E IV +
Sbjct: 69 ERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSS 128
Query: 317 TNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYS 496
+ GP Y VG +DK++L+ G + + L+++ L EVDP+V M E +Y+
Sbjct: 129 SVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYA 188
Query: 497 AIGGLQEQIRQLREVIELPLMNPELF 574
IGGL+ QI++++E +ELPL +PEL+
Sbjct: 189 DIGGLEAQIQEIKEAVELPLTHPELY 214
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 79.8 bits (188), Expect = 1e-15
Identities = 47/166 (28%), Positives = 90/166 (54%)
Frame = +2
Query: 77 MPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSV 256
M ST+D E L + R+ +E +++ +D+ K+L ++ +++ ++K +QSV
Sbjct: 20 MDLSTADEEDLYGRLKSLERQ--LEFTDIQEEYV--KDEQKNLKRELLRAQEEVKRIQSV 75
Query: 257 GQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPR 436
++G+ ++ + + IV +T G Y V +++ LK VAL + ++ LP
Sbjct: 76 PLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPP 135
Query: 437 EVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
E D + +S + DV+Y+ IGG Q +++RE +ELPL + EL+
Sbjct: 136 EADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELY 181
>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
putative similar to 26S proteasome AAA-ATPase subunit
RPT1 SP:Q41365 from [Spinacia oleracea]
Length = 464
Score = 79.4 bits (187), Expect = 2e-15
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +2
Query: 272 EVLKQLTEE-KFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDP 448
+++ TE+ K++V +YVVG + ++ G RV +D I LP ++DP
Sbjct: 130 QIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDP 189
Query: 449 LVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFV 577
V M+ E+ D TYS IGG +EQI ++REV+ELP+++PE FV
Sbjct: 190 SVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFV 232
>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
similar to 26S proteasome ATPase subunit GI:1395190 from
[Spinacia oleracea]
Length = 426
Score = 78.2 bits (184), Expect = 4e-15
Identities = 37/103 (35%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Frame = +2
Query: 272 EVLKQLTEE-KFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDP 448
+++ TE+ K+++ ++VVG ++ ++ G RV +D I LP ++DP
Sbjct: 93 KIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDP 152
Query: 449 LVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFV 577
V M+ E+ DVTY+ +GG +EQI ++REV+ELP+++PE FV
Sbjct: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFV 195
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 47.6 bits (108), Expect = 6e-06
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +2
Query: 356 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 535
+D + LK G V ++ + I+ LP E D V M ++ Y+ IGGL++QI++L
Sbjct: 125 VDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 184
Query: 536 EVIELPLMNPELF 574
E I LP+ + E F
Sbjct: 185 EAIVLPMTHKERF 197
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 47.2 bits (107), Expect = 8e-06
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +2
Query: 356 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLR 535
+D + LK G V ++ + I+ LP E D V M ++ Y+ IGGL++QI++L
Sbjct: 124 VDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
Query: 536 EVIELPLMNPELF 574
E I LP+ + E F
Sbjct: 184 EAIVLPMTHKEQF 196
>At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)
(CDC48) identical to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}
Length = 809
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +2
Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
DV Y +GG+++Q+ Q+RE++ELPL +P+LF
Sbjct: 203 DVGYDDVGGVRKQMAQIRELVELPLRHPQLF 233
Score = 31.5 bits (68), Expect = 0.42
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +2
Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
+V+++ IGGL+ R+L+E ++ P+ +PE F
Sbjct: 476 NVSWNDIGGLENVKRELQETVQYPVEHPEKF 506
>At5g03340.1 68418.m00286 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain; supporting cDNA
gi|26449351|dbj|AK117125.1|
Length = 810
Score = 41.1 bits (92), Expect = 5e-04
Identities = 15/31 (48%), Positives = 26/31 (83%)
Frame = +2
Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
+V Y +GG+++Q+ Q+RE++ELPL +P+LF
Sbjct: 203 EVGYDDVGGVRKQMAQIRELVELPLRHPQLF 233
Score = 31.1 bits (67), Expect = 0.56
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
+V++ IGGL+ R+L+E ++ P+ +PE F
Sbjct: 476 NVSWEDIGGLENVKRELQETVQYPVEHPEKF 506
>At3g53230.1 68416.m05865 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain
Length = 815
Score = 41.1 bits (92), Expect = 5e-04
Identities = 15/31 (48%), Positives = 26/31 (83%)
Frame = +2
Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
+V Y +GG+++Q+ Q+RE++ELPL +P+LF
Sbjct: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLF 234
Score = 31.1 bits (67), Expect = 0.56
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
+V++ IGGL+ R+L+E ++ P+ +PE F
Sbjct: 477 NVSWEDIGGLENVKRELQETVQYPVEHPEKF 507
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
D+ + IGGL E I L+E++ PL+ PE F
Sbjct: 377 DINFDDIGGLSEYINDLKEMVFFPLLYPEFF 407
>At4g27680.1 68417.m03980 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 398
Score = 34.7 bits (76), Expect = 0.045
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 443 DPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
D + ++ + D DV + +IGGL+ + L E++ LPL PELF
Sbjct: 67 DVIACDVINPDHIDVEFGSIGGLETIKQALYELVILPLKRPELF 110
>At5g53540.1 68418.m06653 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 403
Score = 33.5 bits (73), Expect = 0.10
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
DV + +IGGL+ + L E++ LPL PELF
Sbjct: 83 DVEFGSIGGLESIKQALYELVILPLKRPELF 113
>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains
Pfam profile PF00004: ATPase, AAA family
Length = 1122
Score = 33.5 bits (73), Expect = 0.10
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
DVT+ IG L++ L+E++ LPL PELF
Sbjct: 816 DVTFDDIGALEKVKDILKELVMLPLQRPELF 846
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 485 VTYSAIGGLQEQIRQLREVIELPLMNPELF 574
VT++ IG L E L+E++ LPL P+LF
Sbjct: 411 VTFADIGSLDETKESLQELVMLPLRRPDLF 440
>At2g34450.1 68415.m04227 high mobility group (HMG1/2) family
protein similar to HMG protein [Arabidopsis thaliana]
GI:2832361; contains Pfam profile PF00505: HMG (high
mobility group) box
Length = 151
Score = 32.3 bits (70), Expect = 0.24
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 194 LKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEK 301
L D KQY + D+K+++ +G+ GE K +T E+
Sbjct: 74 LDDFRKQYQEENPDVKSMREIGKTCGEKWKTMTYEE 109
>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 829
Score = 31.9 bits (69), Expect = 0.32
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
+VT+ IG L E L+E++ LPL P+LF
Sbjct: 517 NVTFKDIGALDEIKESLQELVMLPLRRPDLF 547
>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 824
Score = 31.9 bits (69), Expect = 0.32
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
+VT+ IG L E L+E++ LPL P+LF
Sbjct: 512 NVTFKDIGALDEIKESLQELVMLPLRRPDLF 542
>At1g50140.1 68414.m05623 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 640
Score = 31.5 bits (68), Expect = 0.42
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 15/186 (8%)
Frame = +2
Query: 62 FKLFTMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLK 241
+KLFT P E + ++K+L E + R+ R + +L K ++ E
Sbjct: 201 YKLFTNVMRLHP--PKEEDTLRLFKKQLGEDR----RIVISRSNINELLKALEEHELLCT 254
Query: 242 ALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIM 421
L V G +L + EK I A N Y+ C L K R +L+++ +
Sbjct: 255 DLYQVNTD-GVILTKQKAEKAIGWAKN--HYLASCPVPLVKGGRLSLPRESLEISIARLR 311
Query: 422 RHLPREVDPL--VYNMSHED-----------PGD--VTYSAIGGLQEQIRQLREVIELPL 556
+ + P + N++ ++ PG+ V + IG L++ + L E++ LP+
Sbjct: 312 KLEDNSLKPSQNLKNIAKDEYERNFVSAVVAPGEIGVKFEDIGALEDVKKALNELVILPM 371
Query: 557 MNPELF 574
PELF
Sbjct: 372 RRPELF 377
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]
Length = 1252
Score = 31.5 bits (68), Expect = 0.42
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 485 VTYSAIGGLQEQIRQLREVIELPLMNPELF 574
V++S IG L+ L+E++ LPL PELF
Sbjct: 947 VSFSDIGALENVKDTLKELVMLPLQRPELF 976
>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to Spastin
(Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment)
(Swiss-Prot:Q9QYY8) [Mus musculus]; similar to
mitochondrial sorting protein 1 (MSP1) protein
(TAT-binding homolog 4) (Swiss-Prot:P28737)
[Saccharomyces cerevisiae]
Length = 1265
Score = 30.7 bits (66), Expect = 0.73
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 485 VTYSAIGGLQEQIRQLREVIELPLMNPELF 574
V++ IG L+ L+E++ LPL PELF
Sbjct: 960 VSFDDIGALENVKETLKELVMLPLQRPELF 989
>At5g60070.1 68418.m07532 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 548
Score = 30.3 bits (65), Expect = 0.97
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +2
Query: 155 KEVESRLKEGRDQLKD-LTKQYDKSENDLKALQSVG--QIVGEVLKQLTEEKFIVKATNG 325
KE+ S E D+L+D L KQ E L G +V E++K E KA NG
Sbjct: 49 KEILSNHMESEDELRDLLRKQNQCGETALYVAAEYGDADVVAELIKYYDLEDAETKARNG 108
Query: 326 --PRYVVGCRRQLDKNKLKGGTRVALDMT 406
P ++ + +LD ++ L MT
Sbjct: 109 FDPFHIAAKQGELDVLRVLMEEHPELSMT 137
>At3g49840.1 68416.m05449 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 606
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Frame = +2
Query: 65 KLFTMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQ-LKDLTKQYDK--SEND 235
KL T+P S SD+ P + R+KL + +E++ KE + LK+L ++ S ++
Sbjct: 383 KLRTVPLSESDIFPSSFHKTPEGRRKLTK-EELQKFTKESTENALKELVSSPEEGSSGSE 441
Query: 236 LKALQSVGQIVGEVLKQLTEEKFIVKATNGP 328
+A + + VGE K+ +++ K N P
Sbjct: 442 KQAARGTSEPVGECTKK-KKQRVRYKERNKP 471
>At2g33793.1 68415.m04145 expressed protein
Length = 212
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 92 SDMEPLREKAFQDYRKKLMEH-KEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIV 268
S ++ REKA +D RKK E V + +K D+LK +K + +N KAL +
Sbjct: 45 SALQQFREKAHEDGRKKKEESISSVSTEVKSKIDELK--SKLEKERQNFSKALSKSSKEC 102
Query: 269 GEVLK 283
+LK
Sbjct: 103 ENILK 107
>At3g19670.1 68416.m02492 FF domain-containing protein / WW
domain-containing protein weak similarity to
huntingtin-interacting protein HYPA/FBP11 [Homo sapiens]
GI:3341980; contains Pfam profiles PF01846: FF domain,
PF00397: WW domain
Length = 960
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +2
Query: 86 STSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEN 232
ST E R++ F+DY L KE +R+K+ + +D+ +++DK +
Sbjct: 797 STIGDESFRKRCFEDYVSLL---KEQSNRIKQNKKVPEDVREEHDKGRD 842
>At1g51940.1 68414.m05855 protein kinase family protein /
peptidoglycan-binding LysM domain-containing protein
contains protein kinases ATP-binding region signature,
PROSITE:PS00107
Length = 651
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = -3
Query: 234 SFSLLSYCLVKSFSWSRPSLSLDSTSLCS--MSFFL*SWKAFSLNGSMSDVL 85
+F + L+ SFS S+P D+T LCS ++F ++FS+ SM DVL
Sbjct: 4 TFYIFFLSLLPSFSSSKPMNCSDTTRLCSSFLAFKPNQNQSFSVIQSMFDVL 55
>At3g19740.1 68416.m02499 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 439
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 476 PGD--VTYSAIGGLQEQIRQLREVIELPLMNPELF 574
PG+ V + IG L+ + L E++ LP+ PELF
Sbjct: 142 PGEIGVKFDDIGALEHVKKTLNELVILPMRRPELF 176
>At1g78700.1 68414.m09173 brassinosteroid signalling positive
regulator-related contains similarity to BZR1 protein
[Arabidopsis thaliana] gi|20270971|gb|AAM18490
Length = 325
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 272 EVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVA 394
EVLK L E + +G Y GC R +++ ++ GG+ A
Sbjct: 50 EVLKALCNEAGWIVEPDGTTYRKGCSRPVERMEIGGGSATA 90
>At3g61130.1 68416.m06841 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 673
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/51 (25%), Positives = 30/51 (58%)
Frame = +2
Query: 155 KEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFI 307
+E+++RLK+ + L + T D + + L+++GQ++ + QL + K +
Sbjct: 245 QELQARLKDSQRVLGEATSDADLPRSAHEKLRAMGQVLAKAKMQLYDCKLV 295
>At5g53450.2 68418.m06643 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 590
Score = 28.3 bits (60), Expect = 3.9
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 101 EPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVL 280
E L EK + KK++ KE S L K ++ + + + N + S G ++GEV
Sbjct: 489 EGLAEKLETEKWKKVVPFKEFPSSLPVA----KLVSGEIEVTMNMNDHIDSPGSVIGEVR 544
Query: 281 KQLTEEKF 304
KQ+ E F
Sbjct: 545 KQIPPEMF 552
>At5g53450.1 68418.m06642 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 670
Score = 28.3 bits (60), Expect = 3.9
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 101 EPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVL 280
E L EK + KK++ KE S L K ++ + + + N + S G ++GEV
Sbjct: 569 EGLAEKLETEKWKKVVPFKEFPSSLPVA----KLVSGEIEVTMNMNDHIDSPGSVIGEVR 624
Query: 281 KQLTEEKF 304
KQ+ E F
Sbjct: 625 KQIPPEMF 632
>At5g48600.1 68418.m06011 structural maintenance of chromosomes
(SMC) family protein similar to SP|P50532 Chromosome
assembly protein XCAP-C {Xenopus laevis}; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 28.3 bits (60), Expect = 3.9
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Frame = +2
Query: 125 QDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ----SVGQIVGEVLKQLT 292
+D + + K++E +L++ ++ D+TK+ + S N + LQ + +++ + K+L
Sbjct: 344 EDLKHVKQKIKKLEDKLEKDSSKIGDMTKESEDSSNLIPKLQENIPKLQKVLLDEEKKLE 403
Query: 293 EEKFIVKA-TNGPR 331
E K I K T G R
Sbjct: 404 EIKAIAKVETEGYR 417
>At3g47460.1 68416.m05161 SMC2-like condensin, putative similar to
SMC2-like condensin (TITAN3) [Arabidopsis thaliana]
GI:14279543; contains Pfam profiles PF02483: SMC family
C-terminal domain, PF02463: RecF/RecN/SMC N terminal
domain
Length = 1171
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 137 KKLMEH-KEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVK 313
K + +H K E RLK+ +K L + S DLK ++V + + + +T+E+ +K
Sbjct: 773 KSIKDHDKNREGRLKDLEKNIKTLKARIQASSKDLKGHENVRERLVMEQEAVTQEQSYLK 832
Query: 314 A 316
+
Sbjct: 833 S 833
>At1g62130.1 68414.m07010 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 1025
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 485 VTYSAIGGLQEQIRQLREVIELPLMNPELF 574
VT+ IG L+ L+E++ LP PELF
Sbjct: 732 VTFDDIGALENVKDTLKELVMLPFQWPELF 761
>At5g48660.1 68418.m06022 expressed protein ; expression supported
by MPSS
Length = 219
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/53 (22%), Positives = 30/53 (56%)
Frame = +2
Query: 92 SDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 250
++++ EKA ++ ++ ++ + RLK+ + K+ K+ + +E + ALQ
Sbjct: 137 TELKEKEEKASKEIKQLQVKLSSITERLKKAETESKEKEKKLETAETHVTALQ 189
>At5g11260.1 68418.m01315 bZIP protein HY5 (HY5) identical to HY5
protein GI:2251085 from [Arabidopsis thaliana]
Length = 168
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 173 LKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEK 301
L E +++KDL + + E L LQ+ Q++ +LK T K
Sbjct: 113 LSELENRVKDLENKNSELEERLSTLQNENQMLRHILKNTTGNK 155
>At1g68780.1 68414.m07862 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 432
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +2
Query: 395 LDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPEL 571
LD++ + LPRE++ L N++ D + S GGL ++I+++ ++EL L N L
Sbjct: 248 LDLSNNYLEGKLPRELESLK-NLTLLDLRNNRLS--GGLSKEIQEMTSLVELVLSNNRL 303
>At1g62630.1 68414.m07066 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 893
Score = 27.9 bits (59), Expect = 5.2
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +2
Query: 110 REKAFQDYRKKLMEHKEVE-SRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQ 286
R +D L+ ++VE RL R K+LT Y ++ L+ V ++ GEV
Sbjct: 75 RVATVEDIIITLLRDRDVEIQRLCLCRFCSKNLTTSYRYGKSVFLRLREVEKLKGEVFGV 134
Query: 287 LTEEKFIVKATNGPRY--VVGCRRQLDK 364
+TE+ P +VG ++ LDK
Sbjct: 135 ITEQASTSAFEERPLQPTIVGQKKMLDK 162
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 158 EVESRLKEGRDQLKDLTKQYDKSENDLKALQSV 256
++++R+ E DQL DLT + ++E D + Q+V
Sbjct: 478 KLKTRIAELEDQLSDLTAERYENERDSRLTQAV 510
>At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +2
Query: 137 KKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEK 301
K + E E E+R +E Q +L + ++ + D+K ++ + + E L QL EEK
Sbjct: 251 KTIAELTEEEARKQELLVQ--NLRQLVEEKKKDMKEIEELCSVKSEELNQLMEEK 303
>At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +2
Query: 137 KKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEK 301
K + E E E+R +E Q +L + ++ + D+K ++ + + E L QL EEK
Sbjct: 251 KTIAELTEEEARKQELLVQ--NLRQLVEEKKKDMKEIEELCSVKSEELNQLMEEK 303
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 149 EHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVK 313
EH+E+ +LKE + +L + +K ++ K L ++ GE L ++ VK
Sbjct: 154 EHQEILKKLKESDEICGNLRVETEKLTSENKELNEKLEVAGETESDLNQKLEDVK 208
>At5g52330.1 68418.m06494 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 397
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 117 RPSRITERNSWSIRKSSQDSKK 182
+PS + +N+W I+K SQ SK+
Sbjct: 13 KPSELYGKNTWKIKKFSQISKR 34
>At5g47820.2 68418.m05908 kinesin-like protein (FRA1) identical to
kinesin-like protein [Arabidopsis thaliana] GI:27260890;
contains Pfam profile PF00225: Kinesin motor domain
Length = 1035
Score = 27.1 bits (57), Expect = 9.0
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 5/141 (3%)
Frame = +2
Query: 140 KLMEHKEVESRLKEGRD-QLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKA 316
++ + E + K R+ +L L K+ KSE + LQ++ Q VL++ TEE A
Sbjct: 636 RMKQEAEQFRQWKASREKELLQLRKEGRKSEYERHKLQALNQRQKMVLQRKTEE--AAMA 693
Query: 317 TNGPRYVVGCRRQLDKNKLKGGTRVALDMTT--LTIMRHLPREVDPL--VYNMSHEDPGD 484
T + ++ R+ + G + T ++ R L E++ + V+ + HE
Sbjct: 694 TKRLKELLEARKSSPREHSAGTNGFGTNGQTNEKSLQRWLDHELEVMVNVHEVRHEYEKQ 753
Query: 485 VTYSAIGGLQEQIRQLREVIE 547
A L E++ LR+V E
Sbjct: 754 SHVRA--ALAEELAVLRQVDE 772
>At5g47820.1 68418.m05907 kinesin-like protein (FRA1) identical to
kinesin-like protein [Arabidopsis thaliana] GI:27260890;
contains Pfam profile PF00225: Kinesin motor domain
Length = 1035
Score = 27.1 bits (57), Expect = 9.0
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 5/141 (3%)
Frame = +2
Query: 140 KLMEHKEVESRLKEGRD-QLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKA 316
++ + E + K R+ +L L K+ KSE + LQ++ Q VL++ TEE A
Sbjct: 636 RMKQEAEQFRQWKASREKELLQLRKEGRKSEYERHKLQALNQRQKMVLQRKTEE--AAMA 693
Query: 317 TNGPRYVVGCRRQLDKNKLKGGTRVALDMTT--LTIMRHLPREVDPL--VYNMSHEDPGD 484
T + ++ R+ + G + T ++ R L E++ + V+ + HE
Sbjct: 694 TKRLKELLEARKSSPREHSAGTNGFGTNGQTNEKSLQRWLDHELEVMVNVHEVRHEYEKQ 753
Query: 485 VTYSAIGGLQEQIRQLREVIE 547
A L E++ LR+V E
Sbjct: 754 SHVRA--ALAEELAVLRQVDE 772
>At4g36150.1 68417.m05145 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1179
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 170 RLKEGRDQLKDLTKQYDKSENDLKAL-QSVGQIVGEVLKQLTEE 298
+L + + LKD+ K+ + +++ +S+ QIVGEV+K L+ +
Sbjct: 140 KLDKWKQALKDVPKKLGFTLSEMSDEGESINQIVGEVIKVLSSD 183
>At2g45550.1 68415.m05664 cytochrome P450 family protein
Length = 511
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 264 ICPTLCRAFRSFSLLSYCLVKSFSWSRPS 178
ICP L A ++ SL+ L+ SF W P+
Sbjct: 449 ICPGLPLAVKTVSLMLASLLYSFDWKLPN 477
>At2g28650.1 68415.m03483 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit
Length = 573
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 68 LFTMPASTSDMEPLREKAFQDYRKKLMEH 154
LFT+ ++S L++ + Q + + LMEH
Sbjct: 3 LFTLSTTSSSSSKLKQHSHQSFSESLMEH 31
>At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 478
Score = 27.1 bits (57), Expect = 9.0
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Frame = +2
Query: 65 KLFTMPASTSDMEPLREKAFQ-------DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDK 223
+LFT P S SD EP+ F D+ E +E + L+ DQ+K T +
Sbjct: 163 ELFTEPESKSDTEPVTVPDFPWIKVKKCDFDHGTTEPEESGAALELSMDQIKSTTTSHGF 222
Query: 224 SENDLKALQS 253
N L+S
Sbjct: 223 LVNSFYELES 232
>At2g16890.1 68415.m01943 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 312
Score = 27.1 bits (57), Expect = 9.0
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Frame = +2
Query: 65 KLFTMPASTSDMEPLREKAFQ-------DYRKKLMEHKEVESRLKEGRDQLKDLTKQYDK 223
+LFT P S SD EP+ F D+ E +E + L+ DQ+K T +
Sbjct: 163 ELFTEPESKSDTEPVTVPDFPWIKVKKCDFDHGTTEPEESGAALELSMDQIKSTTTSHGF 222
Query: 224 SENDLKALQS 253
N L+S
Sbjct: 223 LVNSFYELES 232
>At1g66120.1 68414.m07504 acyl-activating enzyme 11 (AAE11) similar
to AMP-binding protein GI:1903034 from [Brassica napus];
contains Pfam AMP-binding domain PF00501; identical to
cDNA acyl-activating enzyme 11 (At1g66120) GI:29893230,
acyl-activating enzyme 11 [Arabidopsis thaliana]
GI:29893231
Length = 572
Score = 27.1 bits (57), Expect = 9.0
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +2
Query: 122 FQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSV---GQIVGEVL 280
+QD KL EH+++E + ++G +++LT D + K L+SV G+ +GE++
Sbjct: 345 WQDEWNKLPEHQQIELQQRQG---VRNLTLA-DVDVKNTKTLESVPRDGKTMGEIV 396
>At1g62740.1 68414.m07081 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 571
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +2
Query: 113 EKAFQDYRKKLMEHKEVES--RLKEGRDQLKDLTKQ--YDKSEND 235
E Q Y+K L EH+ E+ RL E K+L +Q YD + D
Sbjct: 339 EPVIQTYQKALTEHRNPETLKRLNEAERAKKELEQQEYYDPNIGD 383
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +2
Query: 116 KAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTE 295
K +D +K + K+V+ + +++ KD + K ND+ L++ + E + L E
Sbjct: 447 KMTEDEEEKKDDSKDVKIEGSKAKEEKKDKDVKKKKGGNDIGKLKTKLAKIDEKIGALME 506
Query: 296 EK 301
EK
Sbjct: 507 EK 508
>At1g03000.1 68414.m00271 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 941
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = +2
Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
+V + +GGL++ + + ++LPL++ +LF
Sbjct: 654 NVKWDDVGGLEDVKTSILDTVQLPLLHKDLF 684
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,597,406
Number of Sequences: 28952
Number of extensions: 226472
Number of successful extensions: 829
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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