Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0977
(730 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 161 6e-40
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 157 9e-39
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 157 9e-39
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 157 9e-39
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 82 4e-16
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 80 2e-15
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 77 2e-14
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 77 2e-14
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 62 3e-10
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 59 3e-09
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 56 2e-08
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 53 2e-07
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 53 2e-07
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 53 2e-07
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 53 2e-07
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 53 2e-07
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 53 2e-07
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 53 2e-07
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 52 3e-07
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 52 4e-07
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 52 5e-07
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 52 5e-07
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 51 7e-07
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 51 7e-07
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 50 2e-06
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 50 2e-06
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 49 4e-06
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 48 5e-06
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 47 1e-05
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 47 1e-05
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 47 1e-05
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 46 3e-05
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 45 4e-05
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 45 6e-05
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 44 1e-04
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 44 1e-04
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 44 1e-04
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 44 1e-04
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 42 3e-04
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 42 3e-04
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 42 3e-04
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 42 3e-04
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 42 3e-04
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 42 3e-04
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 42 4e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 42 6e-04
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 42 6e-04
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 41 7e-04
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 41 0.001
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 41 0.001
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 41 0.001
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 40 0.001
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 40 0.001
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 40 0.001
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 40 0.002
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 39 0.003
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 39 0.003
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 39 0.003
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 39 0.004
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 39 0.004
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 38 0.005
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 38 0.005
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 38 0.005
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 38 0.005
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 38 0.007
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 38 0.007
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 38 0.007
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 38 0.007
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 37 0.012
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 37 0.012
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 37 0.016
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 37 0.016
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 37 0.016
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 36 0.021
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 36 0.021
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 36 0.028
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 36 0.028
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 36 0.028
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 36 0.028
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 36 0.028
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 36 0.028
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 36 0.036
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 36 0.036
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 36 0.036
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 36 0.036
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 35 0.048
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 35 0.048
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 35 0.064
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 34 0.084
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 34 0.084
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 34 0.084
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 34 0.084
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 34 0.084
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 34 0.084
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 34 0.11
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 34 0.11
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 34 0.11
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 34 0.11
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 33 0.15
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 33 0.15
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 33 0.15
At5g05570.1 68418.m00605 transducin family protein / WD-40 repea... 33 0.15
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 33 0.15
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 33 0.15
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 33 0.15
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 33 0.19
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 33 0.26
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 33 0.26
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 33 0.26
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 33 0.26
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 33 0.26
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 32 0.34
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 32 0.34
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 32 0.34
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 32 0.34
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 32 0.45
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 32 0.45
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 32 0.45
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 32 0.45
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 32 0.45
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 32 0.45
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 31 0.59
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 31 0.59
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 31 0.59
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 31 0.78
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 31 0.78
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 31 0.78
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 31 0.78
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 31 1.0
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 31 1.0
At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repe... 31 1.0
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 31 1.0
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 31 1.0
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 31 1.0
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 30 1.4
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 30 1.4
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 30 1.4
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 30 1.4
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 30 1.4
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 30 1.8
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 30 1.8
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 30 1.8
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 29 2.4
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 29 2.4
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 29 2.4
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 29 2.4
At5g39760.1 68418.m04816 zinc finger homeobox protein-related / ... 29 2.4
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 29 2.4
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 29 2.4
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 29 3.2
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 29 3.2
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 29 4.2
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 29 4.2
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 29 4.2
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 29 4.2
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 29 4.2
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 29 4.2
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 28 5.5
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 28 5.5
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 28 5.5
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 28 5.5
At5g23070.1 68418.m02697 thymidine kinase, putative similar to t... 28 7.3
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 28 7.3
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 28 7.3
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 28 7.3
At4g13630.1 68417.m02121 expressed protein contains Pfam profile... 27 9.6
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 27 9.6
At3g04660.1 68416.m00499 F-box family protein contains F-box dom... 27 9.6
At2g25800.1 68415.m03096 expressed protein 27 9.6
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 161 bits (390), Expect = 6e-40
Identities = 75/199 (37%), Positives = 114/199 (57%), Gaps = 4/199 (2%)
Frame = +2
Query: 71 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV 250
M+P++++GH+R +T ++YNR GDLLFS AKD P VW++ NGERLGT+ GH G +WC D+
Sbjct: 28 MRPILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDI 87
Query: 251 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPC 430
S LITG D + +LWD+++GK + T K + R+ +FS + A TTD +G
Sbjct: 88 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTSS 147
Query: 431 EVFVID-TRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTG 607
+ V ++ V +L+ K+ +WG L++TI++G E + WD TG
Sbjct: 148 AIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWDAETG 207
Query: 608 KKIHSVKE---HTHQITDM 655
K + E H IT +
Sbjct: 208 KLLKQSDEEVGHKEAITSL 226
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 654 CNFSRDGTMFITASKDHTAKLF 719
C+ SRD + IT S D TAKL+
Sbjct: 85 CDISRDSSRLITGSADQTAKLW 106
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 143 LFSAAKDSKPNVWWSLNGERLGTFN---GHGGVIWCLDVDWQSINLITGGGDSSCRLWDL 313
+ S +D+ +W + G+ L + GH I L + +TG D + +LWD+
Sbjct: 190 IVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDM 249
Query: 314 ET 319
T
Sbjct: 250 RT 251
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 157 bits (380), Expect = 9e-39
Identities = 76/200 (38%), Positives = 114/200 (57%), Gaps = 5/200 (2%)
Frame = +2
Query: 71 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV 250
M+P++++GH+R +T ++YNREGDLLFS AKD P +W++ NGERLGT+ GH G +WC DV
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 251 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPC 430
S LITG D + +LWD+++GK + T K N+ R+ +F+ A TTD +
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTA 120
Query: 431 EVFVIDTRTIDETVSGQAPILKWEITDSK--VTSMIWGSLDETIITGHEAGDLIQWDLRT 604
+ V E ++ +L D K + +WG L++TI++G E + WD T
Sbjct: 121 AIHVKRIAEDPEEQDAES-VLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAET 179
Query: 605 GKKIHSVKE---HTHQITDM 655
GK + E H IT +
Sbjct: 180 GKLLKQSDEEVGHKKDITSL 199
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 654 CNFSRDGTMFITASKDHTAKLF 719
C+ SRD + IT S D TAKL+
Sbjct: 58 CDVSRDSSRLITGSADQTAKLW 79
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 157 bits (380), Expect = 9e-39
Identities = 76/200 (38%), Positives = 114/200 (57%), Gaps = 5/200 (2%)
Frame = +2
Query: 71 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV 250
M+P++++GH+R +T ++YNREGDLLFS AKD P +W++ NGERLGT+ GH G +WC DV
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 251 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPC 430
S LITG D + +LWD+++GK + T K N+ R+ +F+ A TTD +
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTA 120
Query: 431 EVFVIDTRTIDETVSGQAPILKWEITDSK--VTSMIWGSLDETIITGHEAGDLIQWDLRT 604
+ V E ++ +L D K + +WG L++TI++G E + WD T
Sbjct: 121 AIHVKRIAEDPEEQDAES-VLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAET 179
Query: 605 GKKIHSVKE---HTHQITDM 655
GK + E H IT +
Sbjct: 180 GKLLKQSDEEVGHKKDITSL 199
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 654 CNFSRDGTMFITASKDHTAKLF 719
C+ SRD + IT S D TAKL+
Sbjct: 58 CDVSRDSSRLITGSADQTAKLW 79
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 157 bits (380), Expect = 9e-39
Identities = 76/200 (38%), Positives = 114/200 (57%), Gaps = 5/200 (2%)
Frame = +2
Query: 71 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV 250
M+P++++GH+R +T ++YNREGDLLFS AKD P +W++ NGERLGT+ GH G +WC DV
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 251 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPC 430
S LITG D + +LWD+++GK + T K N+ R+ +F+ A TTD +
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTA 120
Query: 431 EVFVIDTRTIDETVSGQAPILKWEITDSK--VTSMIWGSLDETIITGHEAGDLIQWDLRT 604
+ V E ++ +L D K + +WG L++TI++G E + WD T
Sbjct: 121 AIHVKRIAEDPEEQDAES-VLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAET 179
Query: 605 GKKIHSVKE---HTHQITDM 655
GK + E H IT +
Sbjct: 180 GKLLKQSDEEVGHKKDITSL 199
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 654 CNFSRDGTMFITASKDHTAKLF 719
C+ SRD + IT S D TAKL+
Sbjct: 58 CDVSRDSSRLITGSADQTAKLW 79
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 81.8 bits (193), Expect = 4e-16
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Frame = +2
Query: 77 PLMLQGHQRAITQIKYNR---EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 247
PL+ GH R + + Y+ +G L SA+KDS P + G+ +GTF GH G +W
Sbjct: 4 PLVCHGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCS 63
Query: 248 VDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHP 427
+D +I + D + ++W+ TG + + + VR C FS ++ M
Sbjct: 64 LDKNAIRAASASADFTAKIWNALTGDELHSFEHKHIVRACAFSEDTHR---LLTGGMEKI 120
Query: 428 CEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITG-HEAGDLIQWDLRT 604
+F ++ G +P + ++ W D TI++ + GD+ WD+R+
Sbjct: 121 LRIFDLNRPDAPPKEVGNSP--------GSIRTVEWLHSDNTILSSCTDTGDIRLWDIRS 172
Query: 605 GKKIHSVK 628
K +H+++
Sbjct: 173 DKIVHTLE 180
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 79.8 bits (188), Expect = 2e-15
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 4/188 (2%)
Frame = +2
Query: 77 PLMLQGHQRAITQIKYNR---EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 247
PL+ GH R + + Y+ +G L SA+KDS+P + G+ +GTF GH G +W
Sbjct: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 248 VDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHP 427
+D ++ + D S +LWD TG + + + VR C FS Y
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS---QDTKYLITGGFEKI 125
Query: 428 CEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITG-HEAGDLIQWDLRT 604
VF D +D AP + + + + ++ W D+TI++ + G + WD+R+
Sbjct: 126 LRVF--DLNRLD------APPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWDVRS 177
Query: 605 GKKIHSVK 628
GK + +++
Sbjct: 178 GKIVQTLE 185
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 299 RLWDLETGKNIATLKSNSSVRTCNFS 376
RLWD+ +GK + TL++ S V + S
Sbjct: 171 RLWDVRSGKIVQTLETKSPVTSAEVS 196
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 76.6 bits (180), Expect = 2e-14
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Frame = +2
Query: 77 PLMLQGHQRAITQIKYNR---EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 247
P + GH R + + Y+ +G L SA+KDS P + G+ +GTF GH G +W
Sbjct: 9 PQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 248 VDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHP 427
+D ++ + D S +LWD TG + + + VR C FS ++ T G
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDT-KSLLTG----GFE 123
Query: 428 CEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITG-HEAGDLIQWDLRT 604
+ V D +D AP + + + + ++ W D+TI++ + G + WD+R+
Sbjct: 124 KILRVFDMNRLD------APPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRS 177
Query: 605 GKKIHSVK 628
GK + +++
Sbjct: 178 GKIVQTLE 185
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +2
Query: 128 REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 307
+ G+ + +D V+ GE +G GH G + C+ ++ +G D + R+W
Sbjct: 238 KSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 299 RLWDLETGKNIATLKSNSSVRTCNFS 376
RLWD+ +GK + TL++ S V + S
Sbjct: 171 RLWDVRSGKIVQTLETKSPVTSAEVS 196
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 76.6 bits (180), Expect = 2e-14
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Frame = +2
Query: 77 PLMLQGHQRAITQIKYNR---EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 247
P + GH R + + Y+ +G L SA+KDS P + G+ +GTF GH G +W
Sbjct: 9 PQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 248 VDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHP 427
+D ++ + D S +LWD TG + + + VR C FS ++ T G
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDT-KSLLTG----GFE 123
Query: 428 CEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITG-HEAGDLIQWDLRT 604
+ V D +D AP + + + + ++ W D+TI++ + G + WD+R+
Sbjct: 124 KILRVFDMNRLD------APPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRS 177
Query: 605 GKKIHSVK 628
GK + +++
Sbjct: 178 GKIVQTLE 185
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +2
Query: 128 REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 307
+ G+ + +D V+ GE +G GH G + C+ ++ +G D + R+W
Sbjct: 238 KSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 299 RLWDLETGKNIATLKSNSSVRTCNFS 376
RLWD+ +GK + TL++ S V + S
Sbjct: 171 RLWDVRSGKIVQTLETKSPVTSAEVS 196
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 62.5 bits (145), Expect = 3e-10
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 5/199 (2%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE--RLGTFNGHGGVIWCLDVD 253
++L GH A+ +K+N G L+ S + D + +W ++G+ GH I LD+
Sbjct: 47 MLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLW-RVHGDCKNFMVLKGHKNAI--LDLH 103
Query: 254 WQS--INLITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNFSYSAYQAAYTTDKAMGH 424
W S +++ D + R WD+ETGK I + +SS V +C G
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSC------------CPTRRGP 151
Query: 425 PCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRT 604
P + D T Q ++ ++T++ + + I TG D+ WDLR
Sbjct: 152 PLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRK 211
Query: 605 GKKIHSVKEHTHQITDMQL 661
G+ +++ H IT M L
Sbjct: 212 GEATMTLEGHQDTITGMSL 230
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +2
Query: 107 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGG 286
IT + ++ D +F+ D+ VW GE T GH I + + L+T G
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 287 DSSCRLWDL 313
D+ +WD+
Sbjct: 243 DNKLCVWDM 251
Score = 33.9 bits (74), Expect = 0.11
Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 9/107 (8%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW----WSLNGERLGTFNGHGGVIW--C 241
+ L+GHQ IT + + +G L + D+K VW ++ + F GH
Sbjct: 216 MTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNL 275
Query: 242 LDVDW--QSINLITGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNF 373
L W + G D +WD + + I L ++ SV C F
Sbjct: 276 LKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVF 322
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/93 (27%), Positives = 50/93 (53%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 259
L+ +GH R++ I + ++G L S DS VW G + F GH ++ ++
Sbjct: 375 LLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPN 434
Query: 260 SINLITGGGDSSCRLWDLETGKNIATLKSNSSV 358
+L +GG D+ CR+WDL K++ + +++++
Sbjct: 435 GYHLASGGEDNQCRIWDLRMRKSLYIIPAHANL 467
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 268
+GH + ++ ++ G L + + D +W G L GH ++ +
Sbjct: 336 EGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGAL 395
Query: 269 LITGGGDSSCRLWDLETGKNIATLKSN-SSVRTCNFSYSAYQAA 397
+ G DS R+WDL TG++I + + V + NFS + Y A
Sbjct: 396 AASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLA 439
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 83 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 259
++ H ++Q+KY +EG L +A+ D K N+W + + + GH + LD+
Sbjct: 460 IIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITAD 519
Query: 260 SINLITGGGDSSCRLW 307
S + T D + +LW
Sbjct: 520 SSCIATVSHDRTIKLW 535
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/87 (27%), Positives = 47/87 (54%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 271
GH+ I+ + ++ + + SA+ D +W G + T GH +C++ + QS +
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 272 ITGGGDSSCRLWDLETGKNIATLKSNS 352
++G D + R+WD+ TGK + L ++S
Sbjct: 129 VSGSFDETVRIWDVTTGKCLKVLPAHS 155
Score = 48.0 bits (109), Expect = 6e-06
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWW--SLN---GERLGTFNGHGGVIWCLDV 250
L H RA++ +K++ +G LL SA+ D + ++N E + F GH I +
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 251 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC-NFS 376
+ +++ D + +LWD+ETG I TL +++ C NF+
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFN 122
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/190 (18%), Positives = 78/190 (41%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L GH + +N + +++ S + D +W G+ L H + +D +
Sbjct: 109 LIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGS 168
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVI 445
+++ D CR+WD TG + TL + + +S + + + ++ I
Sbjct: 169 LIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSP-NGKFILVGTLDNTLRLWNI 227
Query: 446 DTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSV 625
+ +T +G + + S S+ G + I++G E + W+L + K + +
Sbjct: 228 SSAKFLKTYTGH---VNAQYCISSAFSVTNG---KRIVSGSEDNCVHMWELNSKKLLQKL 281
Query: 626 KEHTHQITDM 655
+ HT + ++
Sbjct: 282 EGHTETVMNV 291
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/160 (17%), Positives = 70/160 (43%), Gaps = 2/160 (1%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGT-FNGHGGVIWCLDVDWQ 259
+L H +T + +NR+G L+ S++ D +W S G + T + + +
Sbjct: 150 VLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPN 209
Query: 260 SINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC-NFSYSAYQAAYTTDKAMGHPCEV 436
++ G D++ RLW++ + K + T + + + C + ++S + + +
Sbjct: 210 GKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHM 269
Query: 437 FVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETI 556
+ ++++ + + + G + + GSLD+T+
Sbjct: 270 WELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTV 309
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 53.2 bits (122), Expect = 2e-07
Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Frame = +2
Query: 107 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGG 286
+T + +N EG LL + + D + +W +LNGE + T + H G I+ L + + L+TG
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIW-TLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSV 385
Query: 287 DSSCRLWDLETGKNIATLKSNSS-VRTCNFSYSAYQAAYTTDKAMGHPCEVFVIDTRTID 463
D + +WD++ + + +S ++ + A +TD +M + C++
Sbjct: 386 DRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTD-SMIYLCKIGETRPAKTF 444
Query: 464 ETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQ 643
G+ +KW+ T S + S S D T W+++ +H ++EHT +
Sbjct: 445 TGHQGEVNCVKWDPTGSLLASC---SDDSTAKI---------WNIKQSTFVHDLREHTKE 492
Query: 644 I 646
I
Sbjct: 493 I 493
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 143 LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETG 322
L SA+ DS +W + G+ L +FNGH ++ L + +G D S +W ++ G
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG 573
Query: 323 KNIATLKSNSSV 358
K + T N +
Sbjct: 574 KIVKTYTGNGGI 585
Score = 37.5 bits (83), Expect = 0.009
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ-S 262
L H+ I +K+N++GD L + + D VW E F H G LDVDW+ +
Sbjct: 361 LSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGP--TLDVDWRNN 418
Query: 263 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 367
++ T DS L + + T + C
Sbjct: 419 VSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNC 453
Score = 36.7 bits (81), Expect = 0.016
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 13/158 (8%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL--------- 244
GHQ + +K++ G LL S + DS +W + H I+ +
Sbjct: 446 GHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGT 505
Query: 245 DVDWQSINLITGGGDSSCRLWDLETGKNIATLKSN-SSVRTCNFSYSA-YQAAYTTDKAM 418
+ + + L + DS+ +LWD E GK + + + V + FS + Y A+ + DK++
Sbjct: 506 NNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSI 565
Query: 419 GHPCEVFVIDTRTIDETVSGQAPILK--WEITDSKVTS 526
++ I I +T +G I + W +K+ +
Sbjct: 566 ----HIWSIKEGKIVKTYTGNGGIFEVCWNKEGNKIAA 599
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 53.2 bits (122), Expect = 2e-07
Identities = 46/193 (23%), Positives = 75/193 (38%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 262
+LQGH + + ++ + + + D +W G T GH G + L V +
Sbjct: 165 VLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRH 224
Query: 263 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFV 442
+ + G D + WDLE K I + + C + T + C V+
Sbjct: 225 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGR--DSVCRVWD 282
Query: 443 IDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHS 622
I T+ Q +L DS V S++ D +ITG + WDLR GK + +
Sbjct: 283 IRTKM-------QIFVLP---HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMAT 332
Query: 623 VKEHTHQITDMQL 661
+ H + M L
Sbjct: 333 ITNHKKTVRAMAL 345
Score = 51.6 bits (118), Expect = 5e-07
Identities = 27/93 (29%), Positives = 45/93 (48%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 259
L L GH + + + +FSA D + W + + +++GH ++CL +
Sbjct: 206 LTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPT 265
Query: 260 SINLITGGGDSSCRLWDLETGKNIATLKSNSSV 358
++TGG DS CR+WD+ T I L +S V
Sbjct: 266 LDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDV 298
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 268
+GH R I+ I++ +G + S D+ VW G+ L F H G I LD
Sbjct: 139 KGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFL 198
Query: 269 LITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNF 373
L TG D + + WDLET + I + + ++ VR+ F
Sbjct: 199 LATGSADRTVKFWDLETFELIGSTRPEATGVRSIKF 234
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 271
GH+ + ++++ G+ L S + D+ +W + T+ GH I + +
Sbjct: 98 GHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWV 157
Query: 272 ITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNF 373
++GG D+ ++WDL GK + K + +R+ +F
Sbjct: 158 VSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDF 192
Score = 35.1 bits (77), Expect = 0.048
Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 259
+ L GH A+ + ++ L+ + A +W + + F GH C V++
Sbjct: 52 MSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSN--CSAVEFH 109
Query: 260 SIN--LITGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNFS 376
L +G D++ ++WD+ I T K +S + T F+
Sbjct: 110 PFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFT 151
Score = 32.7 bits (71), Expect = 0.26
Identities = 34/174 (19%), Positives = 65/174 (37%), Gaps = 2/174 (1%)
Frame = +2
Query: 140 LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLET 319
L + D K N+W L + GH + + D + ++ G +LWD+E
Sbjct: 30 LFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEE 89
Query: 320 GKNIATLKSN-SSVRTCNF-SYSAYQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPIL 493
K + + S+ F + + A+ ++D + +++ I + +T G + +
Sbjct: 90 AKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANL----KIWDIRKKGCIQTYKGHSRGI 145
Query: 494 KWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQITDM 655
++ G LD + WDL GK +H K H I +
Sbjct: 146 STIRFTPDGRWVVSGGLDNVVKV---------WDLTAGKLLHEFKFHEGPIRSL 190
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 194 GERLGTFNGHGGVIWCLDVDWQSINL-ITGGGDSSCRLWDLETGKNIATLKSNSS 355
G +L F H + CL + ++ L ITGG D LW + ++ +L ++S
Sbjct: 5 GYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTS 59
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 53.2 bits (122), Expect = 2e-07
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 12/182 (6%)
Frame = +2
Query: 89 QGHQRAITQIKY--NREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 262
+GH+ ++ +++ N + SA+ D VW N + T GH G + + V
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG 206
Query: 263 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFV 442
+GG D LWDL GK + +L++NS + FS + Y T+ H +++
Sbjct: 207 SLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATE----HGIKIWD 262
Query: 443 IDTRTI--DETVSGQAPILKWE-----ITDSKV---TSMIWGSLDETIITGHEAGDLIQW 592
+++++I D V +A K + T KV TS+ W + T+ +G+ G + W
Sbjct: 263 LESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVW 322
Query: 593 DL 598
+
Sbjct: 323 GI 324
Score = 33.1 bits (72), Expect = 0.19
Identities = 37/189 (19%), Positives = 75/189 (39%), Gaps = 5/189 (2%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L GH + + + +G S + D + +W G F GH + + +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSNSS-----VRTCNFSYSAYQAAYTTDKAMGHPC 430
+++ D + +LW+ G+ T+ V FS + Q + +
Sbjct: 119 QIVSASRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVS-ASWDKTV 176
Query: 431 EVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGK 610
+V+ + + T++G + S V GSL +G + G ++ WDL GK
Sbjct: 177 KVWNLSNCKLRSTLAGHTGYV------STVAVSPDGSL---CASGGKDGVVLLWDLAEGK 227
Query: 611 KIHSVKEHT 637
K++S++ ++
Sbjct: 228 KLYSLEANS 236
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 268
+GH R I+ I+++ +G + S D+ VW G+ L F H G I LD
Sbjct: 88 KGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFL 147
Query: 269 LITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNF 373
L TG D + + WDLET + I T + ++ VR F
Sbjct: 148 LATGSADRTVKFWDLETFELIGTTRPEATGVRAIAF 183
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 271
GH+ + ++++ G+ L S + D+ VW + + T+ GH I ++ +
Sbjct: 47 GHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWV 106
Query: 272 ITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNF 373
++GG D+ ++WDL GK + K + +R+ +F
Sbjct: 107 VSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDF 141
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 259
+ L GH + + +N E L+ + A +W + + F GH C V++
Sbjct: 1 MSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSN--CSAVEFH 58
Query: 260 SIN--LITGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNFS 376
L +G D++ R+WD I T K ++ + T FS
Sbjct: 59 PFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFS 100
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/80 (27%), Positives = 44/80 (55%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L GHQ+ + + ++ +G + SA+ D +W + G+ + F GH G ++ + S
Sbjct: 356 LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSR 415
Query: 266 NLITGGGDSSCRLWDLETGK 325
L++G DS+ ++W++ T K
Sbjct: 416 LLLSGSKDSTLKIWEIRTKK 435
Score = 46.8 bits (106), Expect = 1e-05
Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 5/197 (2%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW--Q 259
+ GH A+ + ++ +G L S + D+ +W L T GH W L V W
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKN--WVLTVAWSPD 162
Query: 260 SINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVF 439
+L++G W+ + G+ + + S+ + PC F
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVH--------LSSPCRRF 214
Query: 440 VIDTRTIDE---TVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGK 610
V ++ D ++ + I+ VT + WG D I TG + + W+ GK
Sbjct: 215 VTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGG-DGIIYTGSQDCTIKMWETTQGK 273
Query: 611 KIHSVKEHTHQITDMQL 661
I +K H H I + L
Sbjct: 274 LIRELKGHGHWINSLAL 290
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 262
+ +GH + Q+ ++ + LL S +KDS +W + GH ++ +D
Sbjct: 397 VFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDG 456
Query: 263 INLITGGGDSSCRLW 307
+++GG D +LW
Sbjct: 457 EKVVSGGKDRVLKLW 471
Score = 38.3 bits (85), Expect = 0.005
Identities = 35/147 (23%), Positives = 54/147 (36%)
Frame = +2
Query: 209 TFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAY 388
T GH + C+ L +G GD++ RLWDL T + T K + + ++S
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKN-WVLTVAWSPD 162
Query: 389 QAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGH 568
+ G C ++G KW IT + S +T
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGELEGSPLTGHK---KW-ITGISWEPVHLSSPCRRFVTSS 218
Query: 569 EAGDLIQWDLRTGKKIHSVKEHTHQIT 649
+ GD WD+ K I + HT +T
Sbjct: 219 KDGDARIWDITLKKSIICLSGHTLAVT 245
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/92 (25%), Positives = 45/92 (48%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 259
+ L GH A+T +K+ +G ++++ ++D +W + G+ + GHG I L + +
Sbjct: 235 ICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE 293
Query: 260 SINLITGGGDSSCRLWDLETGKNIATLKSNSS 355
+ L TG D + R + K A + N +
Sbjct: 294 YV-LRTGAFDHTGRQYPPNEEKQKALERYNKT 324
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 268
+GH R + +++ +G + S +D+ VW G+ L F H G I LD
Sbjct: 233 KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFL 292
Query: 269 LITGGGDSSCRLWDLET 319
L TG D + + WDLET
Sbjct: 293 LATGSADKTVKFWDLET 309
Score = 44.0 bits (99), Expect = 1e-04
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 3/190 (1%)
Frame = +2
Query: 95 HQRAITQIKYNREGD-LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 271
H A+ +K R+ +L + +D K N+W + + GH I + D +
Sbjct: 108 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 167
Query: 272 ITGGGDSSCRLWDLETGKNIATLKSN-SSVRTCNF-SYSAYQAAYTTDKAMGHPCEVFVI 445
G + +LWDLE K + TL + S+ + NF + + A+ + D + +++ I
Sbjct: 168 AAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNL----KIWDI 223
Query: 446 DTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSV 625
+ T G V + + I++G E + WDL GK +H
Sbjct: 224 RKKGCIHTYKGHT---------RGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEF 274
Query: 626 KEHTHQITDM 655
K H +I +
Sbjct: 275 KSHEGKIQSL 284
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/88 (23%), Positives = 40/88 (45%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L GH+ + ++ G+ S + D+ +W + T+ GH + L
Sbjct: 190 LTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 249
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSN 349
+++GG D+ ++WDL GK + KS+
Sbjct: 250 WIVSGGEDNVVKVWDLTAGKLLHEFKSH 277
Score = 35.5 bits (78), Expect = 0.036
Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 1/146 (0%)
Frame = +2
Query: 212 FNGHGGVIWCLDVDWQSIN-LITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAY 388
F H + CL + +S L+TGG D LW + I +L +SS + ++ A
Sbjct: 105 FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS-GIDSVTFDAS 163
Query: 389 QAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGH 568
+ A G +++ ++ + T++G S S+ + E +G
Sbjct: 164 EGLVAAGAASG-TIKLWDLEEAKVVRTLTGHR---------SNCVSVNFHPFGEFFASGS 213
Query: 569 EAGDLIQWDLRTGKKIHSVKEHTHQI 646
+L WD+R IH+ K HT +
Sbjct: 214 LDTNLKIWDIRKKGCIHTYKGHTRGV 239
Score = 31.1 bits (67), Expect = 0.78
Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 259
L L GH I + ++ L+ + A +W + + T GH C+ V++
Sbjct: 146 LSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSN--CVSVNFH 203
Query: 260 SIN--LITGGGDSSCRLWDLETGKNIATLKSNS 352
+G D++ ++WD+ I T K ++
Sbjct: 204 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT 236
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 259
L L GH + + + +FSA D + W + + +++GH ++CL +
Sbjct: 212 LTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPT 271
Query: 260 SINLITGGGDSSCRLWDLETGKNIATLKSNSS 355
L+TGG DS CR+WD+ T I L + +
Sbjct: 272 LDVLLTGGRDSVCRVWDIRTKMQIFALSGHDN 303
Score = 51.6 bits (118), Expect = 5e-07
Identities = 43/193 (22%), Positives = 74/193 (38%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 262
++QGH + + ++ + + + D +W G T GH + L V +
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRH 230
Query: 263 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFV 442
+ + G D + WDLE K I + + S C + T + C V+
Sbjct: 231 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGR--DSVCRVWD 288
Query: 443 IDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHS 622
I T+ +SG D+ V S+ D ++TG + WDLR GK + +
Sbjct: 289 IRTKMQIFALSGH---------DNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMST 339
Query: 623 VKEHTHQITDMQL 661
+ H + M L
Sbjct: 340 LTHHKKSVRAMTL 352
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 52.0 bits (119), Expect = 4e-07
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 4/191 (2%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHG---GVIWCLDVD 253
M GH +T + +G L+ + + D+ VW E + GH + CLD++
Sbjct: 192 MFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDIN 251
Query: 254 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNFSYSAYQAAYTTDKAMGHPC 430
S I+G D S + ++ TGK +++L S++ SV FS S+ M
Sbjct: 252 SNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGM---- 307
Query: 431 EVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGK 610
D + I + P E + VTS+ W + + TG G + WD G
Sbjct: 308 -----DKKLIIWDLQHSTPRFICEHEEG-VTSLTWIGTSKYLATGCANGTVSIWDSLLGN 361
Query: 611 KIHSVKEHTHQ 643
+H+ H HQ
Sbjct: 362 CVHTY--HGHQ 370
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 1/154 (0%)
Frame = +2
Query: 191 NGERLGTFNGHGGVIWCLDVDWQSINLI-TGGGDSSCRLWDLETGKNIATLKSNSSVRTC 367
N + + TF GH G ++ L L+ TGGGD LW + G A L + +C
Sbjct: 59 NDDSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSC 118
Query: 368 NFSYSAYQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLD 547
++S Y + ++F + T+ + G ++W + W
Sbjct: 119 -LAFS-YDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEW---------VRWHPRG 167
Query: 548 ETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQIT 649
++ G E L W+ ++ H +T
Sbjct: 168 HIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVT 201
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/89 (22%), Positives = 43/89 (48%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 262
+L G I ++++ G ++ + ++D +W + L F+GH + C D
Sbjct: 150 VLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDG 209
Query: 263 INLITGGGDSSCRLWDLETGKNIATLKSN 349
+ TG D+S +W+ +T ++I +K +
Sbjct: 210 KLICTGSDDASLIVWNPKTCESIHIVKGH 238
Score = 33.5 bits (73), Expect = 0.15
Identities = 39/191 (20%), Positives = 69/191 (36%)
Frame = +2
Query: 131 EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWD 310
+ L+ + D K +W NG+ GH + CL + L +GG D +++D
Sbjct: 82 DATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFD 141
Query: 311 LETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPI 490
+G TLK + + A C +++ + +A +
Sbjct: 142 ASSG----TLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWN-------ADKEAYL 190
Query: 491 LKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQITDMQLFS* 670
+ + VT + + I TG + LI W+ +T + IH VK H + +
Sbjct: 191 NMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDI 250
Query: 671 RHNVYNCFQGS 703
N GS
Sbjct: 251 NSNSSLAISGS 261
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/87 (18%), Positives = 40/87 (45%)
Frame = +2
Query: 77 PLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW 256
P + H+ +T + + L + + ++W SL G + T++GH + + V
Sbjct: 321 PRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVST 380
Query: 257 QSINLITGGGDSSCRLWDLETGKNIAT 337
+ +++ D++ R+++ +N T
Sbjct: 381 NTDFIVSVSVDNTARVFESSEFQNKVT 407
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 268
+GH R + +++ +G + S +D+ VW G+ L F H G I LD
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFL 199
Query: 269 LITGGGDSSCRLWDLET 319
L TG D + + WDLET
Sbjct: 200 LATGSADRTVKFWDLET 216
Score = 42.3 bits (95), Expect = 3e-04
Identities = 38/188 (20%), Positives = 72/188 (38%), Gaps = 1/188 (0%)
Frame = +2
Query: 95 HQRAITQIKYNREGD-LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 271
H A+ +K R+ +L + +D K N+W + + GH I + D + +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 272 ITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVIDT 451
G + +LWDLE K + TL + S + + + + ++ +++ I
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRS-NCISVDFHPF-GEFFASGSLDTNLKIWDIRK 132
Query: 452 RTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKE 631
+ T G V + + +++G E + WDL GK + K
Sbjct: 133 KGCIHTYKGHT---------RGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS 183
Query: 632 HTHQITDM 655
H QI +
Sbjct: 184 HEGQIQSL 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/88 (23%), Positives = 40/88 (45%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L GH+ + ++ G+ S + D+ +W + T+ GH + L
Sbjct: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 156
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSN 349
+++GG D+ ++WDL GK + KS+
Sbjct: 157 WVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Score = 36.7 bits (81), Expect = 0.016
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 1/150 (0%)
Frame = +2
Query: 200 RLGTFNGHGGVIWCLDVDWQSIN-LITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFS 376
+L F H + CL + +S L+TGG D LW + I +L +SS + +
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS-GIDSVT 66
Query: 377 YSAYQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETI 556
+ A + A G +++ ++ I T++G S S+ + E
Sbjct: 67 FDASEVLVAAGAASG-TIKLWDLEEAKIVRTLTGHR---------SNCISVDFHPFGEFF 116
Query: 557 ITGHEAGDLIQWDLRTGKKIHSVKEHTHQI 646
+G +L WD+R IH+ K HT +
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGV 146
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 259
L L GH I + ++ L+ + A +W + + T GH C+ VD+
Sbjct: 53 LSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSN--CISVDFH 110
Query: 260 SIN--LITGGGDSSCRLWDLETGKNIATLKSNS 352
+G D++ ++WD+ I T K ++
Sbjct: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT 143
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 268
+GH R + +++ +G + S +D+ VW G+ L F H G I LD
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFL 199
Query: 269 LITGGGDSSCRLWDLET 319
L TG D + + WDLET
Sbjct: 200 LATGSADRTVKFWDLET 216
Score = 42.3 bits (95), Expect = 3e-04
Identities = 38/188 (20%), Positives = 72/188 (38%), Gaps = 1/188 (0%)
Frame = +2
Query: 95 HQRAITQIKYNREGD-LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 271
H A+ +K R+ +L + +D K N+W + + GH I + D + +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 272 ITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVIDT 451
G + +LWDLE K + TL + S + + + + ++ +++ I
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRS-NCISVDFHPF-GEFFASGSLDTNLKIWDIRK 132
Query: 452 RTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKE 631
+ T G V + + +++G E + WDL GK + K
Sbjct: 133 KGCIHTYKGHT---------RGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS 183
Query: 632 HTHQITDM 655
H QI +
Sbjct: 184 HEGQIQSL 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/88 (23%), Positives = 40/88 (45%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L GH+ + ++ G+ S + D+ +W + T+ GH + L
Sbjct: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 156
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSN 349
+++GG D+ ++WDL GK + KS+
Sbjct: 157 WVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Score = 36.7 bits (81), Expect = 0.016
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 1/150 (0%)
Frame = +2
Query: 200 RLGTFNGHGGVIWCLDVDWQSIN-LITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFS 376
+L F H + CL + +S L+TGG D LW + I +L +SS + +
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS-GIDSVT 66
Query: 377 YSAYQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETI 556
+ A + A G +++ ++ I T++G S S+ + E
Sbjct: 67 FDASEVLVAAGAASG-TIKLWDLEEAKIVRTLTGHR---------SNCISVDFHPFGEFF 116
Query: 557 ITGHEAGDLIQWDLRTGKKIHSVKEHTHQI 646
+G +L WD+R IH+ K HT +
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGV 146
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 259
L L GH I + ++ L+ + A +W + + T GH C+ VD+
Sbjct: 53 LSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSN--CISVDFH 110
Query: 260 SIN--LITGGGDSSCRLWDLETGKNIATLKSNS 352
+G D++ ++WD+ I T K ++
Sbjct: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT 143
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/72 (36%), Positives = 34/72 (47%)
Frame = +2
Query: 95 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLI 274
H ++ +K+ R LFS KD W + E L T GH IWCL + + L+
Sbjct: 623 HGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLV 682
Query: 275 TGGGDSSCRLWD 310
TG D S R WD
Sbjct: 683 TGSHDRSMRRWD 694
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/90 (25%), Positives = 44/90 (48%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L+GH+ +T + + G L S++KD VW + +GH +W +D D +
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEER 203
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSNSS 355
++TG D R + ++ + +L S+S+
Sbjct: 204 YVVTGSADQELRFYAVKEYSSNGSLVSDSN 233
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +2
Query: 95 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLI 274
H+ A+T ++YN+ G +L S +KD+ +W + L GH + L L+
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV 164
Query: 275 TGGGDSSCRLWDLET 319
+ D R+WDLET
Sbjct: 165 SSSKDKFLRVWDLET 179
Score = 35.5 bits (78), Expect = 0.036
Identities = 20/96 (20%), Positives = 44/96 (45%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 259
L L GH+ + I + +G+L+ + ++D +W G+ + HG + +
Sbjct: 576 LSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRN 635
Query: 260 SINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 367
+ L + G D + WD + +++ TL+ + + C
Sbjct: 636 THYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWC 671
Score = 30.7 bits (66), Expect = 1.0
Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 1/156 (0%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 271
G A+T I + L+ D +W + G FN H G + L + L
Sbjct: 63 GPSLAVTSIA-SSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSML 121
Query: 272 ITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVIDT 451
+G D+ LWD+ + L+ + T + ++ K V+ ++T
Sbjct: 122 ASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSK--DKFLRVWDLET 179
Query: 452 RTIDETVSGQAPILKWEI-TDSKVTSMIWGSLDETI 556
+ + VSG + W + TD + ++ GS D+ +
Sbjct: 180 QHCMQIVSGHHSEV-WSVDTDPEERYVVTGSADQEL 214
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +2
Query: 518 VTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQITDM 655
VT++ + + + +G + D+I WD+ + ++ H Q+TD+
Sbjct: 109 VTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDL 154
Score = 27.9 bits (59), Expect = 7.3
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 16/158 (10%)
Frame = +2
Query: 221 HGGVIWCLDVDWQSINLITGGGDSSCRLWDLE----TGK--------NIATLKSNSSVRT 364
HGG IW + +T D + W+ + +GK N+ ++K N V
Sbjct: 486 HGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDDVLA 545
Query: 365 CNFSYSAYQAAYTTDKAMGHPCEVFVIDTRTIDETVSG-QAPILKWEITDSKVTSMIWGS 541
S A A + +VF +D+ ++ G + P++ +I+ S ++ GS
Sbjct: 546 VAISPDAKHIAVA---LLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDIS-SDGELIVTGS 601
Query: 542 LDETI-ITGHEAGDLIQWDLRTGKKIHSVK--EHTHQI 646
D+ + I G + GD + G + VK +TH +
Sbjct: 602 QDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYL 639
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +2
Query: 92 GHQRAITQIKY-NREGDLLFSAAKDSKPNVWWSLN-GERLGTFNGHGGVIWCLDVDWQSI 265
GH + ++ I++ ++G LL SA D K +W N G+ + T+ GH + +
Sbjct: 280 GHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGS 339
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKS 346
+T G D + + WD ETG+ I+T +
Sbjct: 340 KFLTAGYDKNIKYWDTETGQVISTFST 366
Score = 33.1 bits (72), Expect = 0.19
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 8/176 (4%)
Frame = +2
Query: 131 EGDLLFSAAKDSKPNVWWSLNGERL-GTFNGHG-GVIWCLDVDWQSINLITGGGDSSCRL 304
+G A KD+K N +RL T++GH GV Q L++ G D ++
Sbjct: 250 QGRSWIEAPKDAKANNDHCYIPKRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKI 309
Query: 305 WDL-ETGKNIATLKSNS-SVRTCNFSYSAYQAAYTTDKAMGHPCEVFVIDTRT---IDET 469
WD+ +GK + T ++ +VR FS + + T G+ + DT T I
Sbjct: 310 WDVYNSGKCMRTYMGHAKAVRDICFSNDG--SKFLT---AGYDKNIKYWDTETGQVISTF 364
Query: 470 VSGQAP-ILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEH 634
+G+ P ++K D K ++ G D+ I+ QWD+ TG+ +H
Sbjct: 365 STGKIPYVVKLNPDDDKQNILLAGMSDKKIV---------QWDINTGEVTQEYDQH 411
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/192 (19%), Positives = 79/192 (41%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
+ H+ I + LF+ +D +W + +G + + G G I + V +
Sbjct: 227 IHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNK 286
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVI 445
++I ++ +WD+ +G+ TL ++ + C S + + + A +++ +
Sbjct: 287 SVIAATSSNNLFVWDVSSGRVRHTLTGHTD-KVCAVDVSKFSSRHVVSAAYDRTIKLWDL 345
Query: 446 DTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSV 625
TV + S ++ T+ +GH G+L WD++TGK + V
Sbjct: 346 HKGYCTNTV----------LFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEV 395
Query: 626 KEHTHQITDMQL 661
H+ +T + L
Sbjct: 396 AGHSSAVTSVSL 407
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVI---W---CLDVD 253
GH A+T + +R G+ + ++ +D+ NV+ + E GT G + W C+ D
Sbjct: 397 GHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPD 456
Query: 254 WQSINLITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNFS 376
+ G D S +W L G ++ LK +S + C++S
Sbjct: 457 DDYV--AAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWS 496
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = +2
Query: 131 EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWD 310
+G +FS D +W G+ L GH + + + ++T G D+ ++D
Sbjct: 368 DGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFD 427
Query: 311 LETGKNIATLKSNSSVRTCNFSYS 382
T + TL+++ + N+S S
Sbjct: 428 TRTLEICGTLRASGNRLASNWSRS 451
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +2
Query: 545 DETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQI--TDMQLFS*RHNV 682
++++I + +L WD+ +G+ H++ HT ++ D+ FS RH V
Sbjct: 285 NKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVV 332
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/89 (24%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNG-ERLGTFNGHGGVIWCLDVDWQSI 265
+GH I+ + ++ + SA+ D +W + + E L GH ++C++ + S
Sbjct: 82 EGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSN 141
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSNS 352
+++G D + R+W+++TGK + +K++S
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L+GH AI+ +K++ +G+LL SA+ D +W + N + + GH I D+ W S
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGI--SDLAWSSD 96
Query: 266 NLITGGGDSSC--RLWD 310
+ T C R+WD
Sbjct: 97 SHYTCSASDDCTLRIWD 113
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/91 (21%), Positives = 41/91 (45%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 262
+L+GH + + +N +L+ S + D +W G+ + H I + +
Sbjct: 123 VLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDG 182
Query: 263 INLITGGGDSSCRLWDLETGKNIATLKSNSS 355
+++ D SC++WD + G + TL + S
Sbjct: 183 SLIVSASHDGSCKIWDAKEGTCLKTLIDDKS 213
Score = 34.3 bits (75), Expect = 0.084
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +2
Query: 104 AITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN---LI 274
A++ K++ G + A DS + G+ L + GH ++C+ + N ++
Sbjct: 215 AVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIV 274
Query: 275 TGGGDSSCRLWDLETGKNIATLKSNS 352
+G D+ LWDL+ + L+ ++
Sbjct: 275 SGSEDNCVYLWDLQARNILQRLEGHT 300
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 262
+L+GH+ A+ ++N +G+ + KD +W G + T+ HG + + V +
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDN 72
Query: 263 INLITGGGDSSCRLWDLETGKNIATLKS-NSSVRTCNFSYSA 385
+ GGD WD+ TG+ I + + V F+ S+
Sbjct: 73 AKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSS 114
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/74 (22%), Positives = 30/74 (40%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 268
+ H R + + + S D + W G + F GH G + + + S
Sbjct: 57 KSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSV 116
Query: 269 LITGGGDSSCRLWD 310
+++ G D S R+WD
Sbjct: 117 VVSAGFDRSLRVWD 130
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 48.4 bits (110), Expect = 5e-06
Identities = 41/178 (23%), Positives = 73/178 (41%), Gaps = 9/178 (5%)
Frame = +2
Query: 92 GHQRAITQIKY--NREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
GH+ ++ +++ N + SA+ D VW N + T GH G + + V
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGS 206
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAM-------GH 424
+GG D LWDL GK + +L++ S + + FS + Y T+ ++
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKS 266
Query: 425 PCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDL 598
E +D + E G I + TS+ W + T+ +G+ G + W +
Sbjct: 267 VVEDLKVDLKAEAEKTDGSTGIGN-KTKVIYCTSLNWSADGNTLFSGYTDGVIRVWGI 323
Score = 36.3 bits (80), Expect = 0.021
Identities = 36/184 (19%), Positives = 75/184 (40%), Gaps = 3/184 (1%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
+ GH + + + +G S + D + +W GE F GH + + +
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 266 NLITGGGDSSCRLWDL--ETGKNIATLKSNSSVRTC-NFSYSAYQAAYTTDKAMGHPCEV 436
+++ D + +LW+ E I+ + +C FS + + + +V
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVS-ASWDKTVKV 177
Query: 437 FVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKI 616
+ + + T++G + L + V GSL +G + G ++ WDL GKK+
Sbjct: 178 WNLQNCKLRNTLAGHSGYL------NTVAVSPDGSL---CASGGKDGVILLWDLAEGKKL 228
Query: 617 HSVK 628
+S++
Sbjct: 229 YSLE 232
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L+GH+R I ++++ + +A+ D +W +G L TF GH +
Sbjct: 537 LKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGT 596
Query: 266 NLITGGGDSSCRLWDLETGKNIAT 337
++ G D +LW++ T + IAT
Sbjct: 597 QFVSCGADGLLKLWNVNTSECIAT 620
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 268
+GH ++ + + +G S D +W E + T++ H +W L V ++
Sbjct: 580 EGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEM 639
Query: 269 LITGGGDSSCRLWDLETGKN 328
+ TGGGD+ LW T +
Sbjct: 640 IATGGGDAVINLWHDSTASD 659
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL--DVDWQS 262
+GH+ + + + G LL +A D K VW G F GH GV+ + D
Sbjct: 99 KGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNK 158
Query: 263 INLITGGGDSSCRLWDL 313
LI+G D++ R+WDL
Sbjct: 159 NILISGSDDATVRVWDL 175
Score = 37.9 bits (84), Expect = 0.007
Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 1/175 (0%)
Frame = +2
Query: 65 LNMKPL-MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWC 241
+N+K ++ H + I + R L+ + ++D ++W + + T GH I+
Sbjct: 487 INLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFS 546
Query: 242 LDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMG 421
++ ++T GD + ++W + G + T + ++S S +A++ TD
Sbjct: 547 VEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTS--------SVLRASFITDGTQF 598
Query: 422 HPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLI 586
C D V+ I ++ + KV ++ G E I TG GD +
Sbjct: 599 VSCGA---DGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATG--GGDAV 648
Score = 35.9 bits (79), Expect = 0.028
Identities = 39/198 (19%), Positives = 85/198 (42%), Gaps = 10/198 (5%)
Frame = +2
Query: 83 MLQGHQRAITQIK--YNREGDLLF-SAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVD 253
+L GH+ + + + G++L + +KD +W + + +G GH G I +
Sbjct: 396 VLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFA 455
Query: 254 WQSIN-LITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTD-KAMGHP 427
+S + ++G GD + ++W L+ S S N + AA+ D ++
Sbjct: 456 KKSFSFFVSGSGDRTLKVWSLDG-------ISEDSEEPINLKTRSVVAAHDKDINSVAVA 508
Query: 428 CEVFVIDTRTIDETVS-GQAPILKWEIT----DSKVTSMIWGSLDETIITGHEAGDLIQW 592
++ T + D T S + P L +T ++ S+ + ++D+ ++T + W
Sbjct: 509 RNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIW 568
Query: 593 DLRTGKKIHSVKEHTHQI 646
+ G + + + HT +
Sbjct: 569 AISDGSCLKTFEGHTSSV 586
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
++G +T + + + LLFSA + VW + + ++ GH G + +
Sbjct: 56 IEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGG 115
Query: 266 NLITGGGDSSCRLWDLETG 322
L T G D +WD++ G
Sbjct: 116 LLATAGADRKVLVWDVDGG 134
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 181
+++ H A+T I + +G LFSA +D N+W
Sbjct: 187 IMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 259
L QGH + + Y+ + LL + A D+K VW ++G TF H + L
Sbjct: 343 LKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMAD 402
Query: 260 SINLITGGGDSSCRLWDLETGKNIAT 337
+ +L++ D + R WD + KN T
Sbjct: 403 NHSLLSASLDGTVRAWDFKRYKNYKT 428
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGD-LLFSAAKDSKPNVW-WSLNGERLGTFNGHGGVIWCLDVDW 256
+L ++ +T +N G+ L F AK + VW W L GH + C+
Sbjct: 301 LLSISRQKLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQ-QGHYFDVNCVTYSP 359
Query: 257 QSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRT 364
S L TG D+ ++W++ +G T +++ T
Sbjct: 360 DSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVT 395
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 259
L QGH + + Y+ + LL + A D+K VW ++G TF H + L
Sbjct: 383 LKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMAD 442
Query: 260 SINLITGGGDSSCRLWDLETGKNIAT 337
+ +L++ D + R WD + KN T
Sbjct: 443 NHSLLSASLDGTVRAWDFKRYKNYKT 468
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGD-LLFSAAKDSKPNVW-WSLNGERLGTFNGHGGVIWCLDVDW 256
+L ++ +T +N G+ L F AK + VW W L GH + C+
Sbjct: 341 LLSISRQKLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQ-QGHYFDVNCVTYSP 399
Query: 257 QSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRT 364
S L TG D+ ++W++ +G T +++ T
Sbjct: 400 DSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVT 435
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 46.0 bits (104), Expect = 3e-05
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 7/195 (3%)
Frame = +2
Query: 98 QRAITQIKYNREGDLLF-SAAKDSKPNVWW-SLNGERL-GTFNGHGGVIWCLDVDWQSIN 268
+R + + +RE F S + D +W SL G L T GH G + + D I
Sbjct: 854 RREVCDLVGDREDAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAISSDRGKI- 912
Query: 269 LITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVID 448
++G D S +WD +T + + LK + S +C S + H V + D
Sbjct: 913 -VSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGERVL-----TAAHDGTVKMWD 966
Query: 449 TRTIDETVSG----QAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKI 616
RT D V+ + IL E DS T ++ + +T+ WD+R+GK++
Sbjct: 967 VRT-DMCVATVGRCSSAILSLEYDDS--TGILAAAGRDTVAN--------IWDIRSGKQM 1015
Query: 617 HSVKEHTHQITDMQL 661
H +K HT I +++
Sbjct: 1016 HKLKGHTKWIRSIRM 1030
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/89 (24%), Positives = 40/89 (44%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L+GH ++ +K G+ + +AA D +W + T I L+ D +
Sbjct: 935 LKGHDSQVSCVKM-LSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTG 993
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSNS 352
L G D+ +WD+ +GK + LK ++
Sbjct: 994 ILAAAGRDTVANIWDIRSGKQMHKLKGHT 1022
Score = 34.7 bits (76), Expect = 0.064
Identities = 23/90 (25%), Positives = 41/90 (45%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L+GH + I +R G ++ S + D VW + L GH + C+ +
Sbjct: 895 LKGHTGTVRAISSDR-GKIV-SGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKM-LSGE 951
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSNSS 355
++T D + ++WD+ T +AT+ SS
Sbjct: 952 RVLTAAHDGTVKMWDVRTDMCVATVGRCSS 981
Score = 32.3 bits (70), Expect = 0.34
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L+GH + I I+ D L + + D VW G H G + ++
Sbjct: 1018 LKGHTKWIRSIRMVE--DTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDK 1075
Query: 266 NLITGGGDSSCRLWDLETG-----KNIATLKSNS 352
+ITG D R W+ + G KNI TL S+S
Sbjct: 1076 GIITGSADGLLRFWENDEGGIKCVKNI-TLHSSS 1108
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSL--NGE-----RLG-TFNGHGGVIW 238
+L GH + + ++++ D+LFS + D+ VWWS +GE LG + NGH +W
Sbjct: 158 VLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVW 217
Query: 239 CLDVDWQSINLITGGGDSSCRLWDLETGK 325
+ + ++T D + ++W + K
Sbjct: 218 SISFNAAGDKMVTCSDDLTLKIWGTDIAK 246
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 74 KPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW--WSLNGERLGTFNGHGGVIWCLD 247
K ++ + H R + ++ G LL +A+ D +W + E + T GH + +
Sbjct: 66 KTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVS 125
Query: 248 VDWQSINLITGGGDSSCRLWDLETG 322
+ L T D S +W++ G
Sbjct: 126 WNASGSCLATCSRDKSVWIWEVLEG 150
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +2
Query: 92 GHQRAITQIKY--NREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
GH+ ++ +++ N + SA+ D VW N + + GH G + + V
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGS 206
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAM 418
+GG D LWDL GK + +L++ S + + FS + Y T+ ++
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSI 257
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/75 (20%), Positives = 31/75 (41%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L GH + + + +G S + D + +W GE F GH + + +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 266 NLITGGGDSSCRLWD 310
+++ D + +LW+
Sbjct: 119 QIVSASRDRTIKLWN 133
Score = 32.3 bits (70), Expect = 0.34
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L GH + + + +G L S KD +W G++L + G +I L +
Sbjct: 189 LVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-GSIIHSLCFS-PNR 246
Query: 266 NLITGGGDSSCRLWDLETGKNIATLK 343
+ ++S R+WDLE+ + LK
Sbjct: 247 YWLCAATENSIRIWDLESKSVVEDLK 272
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/82 (18%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW--CLDVDWQSI 265
GH + + + ++ + + SA++D +W +L + G G W C+ ++
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTL 162
Query: 266 --NLITGGGDSSCRLWDLETGK 325
+++ D + ++W+L+ K
Sbjct: 163 VPTIVSASWDKTVKVWNLQNCK 184
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREG-DLLFSAAKDSKPNVWWSLN------GERLGTFNGHGGVIWC 241
+++ H +T I + D++ +A++D K + W L G GH +
Sbjct: 10 IMRAHTDIVTAIATPIDNSDIIVTASRD-KSIILWKLTKDDKSYGVAQRRLTGHSHFVED 68
Query: 242 LDVDWQSINLITGGGDSSCRLWDLETGK 325
+ + ++G D RLWDL TG+
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLATGE 96
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW-QSIN 268
GH + + ++ LL S KD +W + +G L + +GH ++ L V W Q+ N
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIV--LSVKWNQNGN 323
Query: 269 -LITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFV 442
L+T D +L+D+ T K + + + ++ T + ++ + + + G C V
Sbjct: 324 WLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIV 382
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L GH+ + +K+N+ G+ L +A+KD ++ + L +F GH + L W
Sbjct: 306 LHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSL--AWHPC 363
Query: 266 N---LITGGGDSSCRLW 307
+ ++G D S W
Sbjct: 364 HEEYFVSGSSDGSICHW 380
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +2
Query: 518 VTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQITDM 655
V S+ W ++T + + +D+RT K++ S + HT +T +
Sbjct: 313 VLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSL 358
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG-TFNGHGGVIWCLDVDWQS 262
LQ H I + + L +A+ D +W +L+G +L GH +W D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIW-NLDGFKLEKVLTGHERWVWDCDFSMDG 271
Query: 263 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 367
L+T D++ RLW + GK +++ C
Sbjct: 272 EYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVC 306
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 654 CNFSRDGTMFITASKDHTAKLF 719
C+FS DG +TAS D TA+L+
Sbjct: 265 CDFSMDGEYLVTASSDTTARLW 286
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWC 241
+L GH+R + ++ +G+ L +A+ D+ +W G+ + H C
Sbjct: 254 VLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVC 306
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +2
Query: 77 PLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW 256
P + +GH+ ++ + N G +L S + VW G + GH + L +D
Sbjct: 206 PTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDS 265
Query: 257 QSINLITGGGDSSCRLWDLETGKNIATLKSNSS---VRTCNFSYS 382
++G DS RLWDL + + T ++ CN S+S
Sbjct: 266 TGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 1/122 (0%)
Frame = +2
Query: 74 KPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER-LGTFNGHGGVIWCLDV 250
K + L+GH + + + G S + DS + W L +R L T+ H +W L
Sbjct: 247 KSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRL-WDLGQQRCLHTYAVHTDSVWALAC 305
Query: 251 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPC 430
+ ++ +GG D L DL T +++ ++ ++ A T P
Sbjct: 306 NPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQLALQDNSIWVATTDSSVERWPA 365
Query: 431 EV 436
EV
Sbjct: 366 EV 367
Score = 36.3 bits (80), Expect = 0.021
Identities = 38/177 (21%), Positives = 72/177 (40%), Gaps = 2/177 (1%)
Frame = +2
Query: 143 LFSAAKDSKPNVWWSLN-GERLGTFNGHGGVIWCLDVDWQSINLITGGG-DSSCRLWDLE 316
L S + D+ W L+ G T H + CL V ++ N++ GG +WD+E
Sbjct: 98 LVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIE 157
Query: 317 TGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPILK 496
+ T ++++ + S + T+ + +G + V + + G P +
Sbjct: 158 AALSPVTKPNDANEDS---SSNGANGPVTSLRTVGSSNNISVQSSPS-----HGYTPTIA 209
Query: 497 WEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQITDMQLFS 667
+S V ++ +++G L WD RTG K ++ HT + + L S
Sbjct: 210 KGHKES-VYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDS 265
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +2
Query: 77 PLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW 256
P + +GH+ ++ + N G +L S + VW G + GH + L +D
Sbjct: 206 PTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDS 265
Query: 257 QSINLITGGGDSSCRLWDLETGKNIATLKSNSS---VRTCNFSYS 382
++G DS RLWDL + + T ++ CN S+S
Sbjct: 266 TGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 1/122 (0%)
Frame = +2
Query: 74 KPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER-LGTFNGHGGVIWCLDV 250
K + L+GH + + + G S + DS + W L +R L T+ H +W L
Sbjct: 247 KSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRL-WDLGQQRCLHTYAVHTDSVWALAC 305
Query: 251 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPC 430
+ ++ +GG D L DL T +++ ++ ++ A T P
Sbjct: 306 NPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQLALQDNSIWVATTDSSVERWPA 365
Query: 431 EV 436
EV
Sbjct: 366 EV 367
Score = 36.3 bits (80), Expect = 0.021
Identities = 38/177 (21%), Positives = 72/177 (40%), Gaps = 2/177 (1%)
Frame = +2
Query: 143 LFSAAKDSKPNVWWSLN-GERLGTFNGHGGVIWCLDVDWQSINLITGGG-DSSCRLWDLE 316
L S + D+ W L+ G T H + CL V ++ N++ GG +WD+E
Sbjct: 98 LVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIE 157
Query: 317 TGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPILK 496
+ T ++++ + S + T+ + +G + V + + G P +
Sbjct: 158 AALSPVTKPNDANEDS---SSNGANGPVTSLRTVGSSNNISVQSSPS-----HGYTPTIA 209
Query: 497 WEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQITDMQLFS 667
+S V ++ +++G L WD RTG K ++ HT + + L S
Sbjct: 210 KGHKES-VYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDS 265
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG-TFNGHGGVIWCLDVDW 256
L L GH+ +I +I ++ +G + S + D +W + E +G GH +W D
Sbjct: 229 LRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVW--DCCI 286
Query: 257 QSINLITGGGDSSCRLWDLETGKNIATLKSN 349
++T G D +CR+W ++ G + +K +
Sbjct: 287 SDSLIVTAGEDCTCRVWGVD-GTQLEVIKEH 316
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG-TFNGHGGVIWCLDVDW 256
L L GH+ +I +I ++ +G + S + D +W + E +G GH +W D
Sbjct: 229 LRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVW--DCCI 286
Query: 257 QSINLITGGGDSSCRLWDLETGKNIATLKSN 349
++T G D +CR+W ++ G + +K +
Sbjct: 287 SDSLIVTAGEDCTCRVWGVD-GTQLEVIKEH 316
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 42.3 bits (95), Expect = 3e-04
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 4/176 (2%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG---TFNGHGGVIWCLDVDW 256
L GH + +T +K+ + DL+ +A+ D +W + T N H + + V
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHP 319
Query: 257 QSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTD-KAMGHPCE 433
+ ++ D + +DL +G +A + +S N Y+A AA+ D +G
Sbjct: 320 TNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSK----NVDYTA--AAFHPDGLILGTGTS 373
Query: 434 VFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLR 601
V+ + D V QA + K++ +VT++ + + T E G + WDLR
Sbjct: 374 QSVV--KIWD--VKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRL-WDLR 424
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 42.3 bits (95), Expect = 3e-04
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 4/176 (2%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG---TFNGHGGVIWCLDVDW 256
L GH + +T +K+ + DL+ +A+ D +W + T N H + + V
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHP 319
Query: 257 QSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTD-KAMGHPCE 433
+ ++ D + +DL +G +A + +S N Y+A AA+ D +G
Sbjct: 320 TNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSK----NVDYTA--AAFHPDGLILGTGTS 373
Query: 434 VFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLR 601
V+ + D V QA + K++ +VT++ + + T E G + WDLR
Sbjct: 374 QSVV--KIWD--VKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRL-WDLR 424
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +2
Query: 107 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGG 286
I + + + +F+AA DS W +G+ TF GH + + + ++TG
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 287 DSSCRLWDLETGKNIATLKS 346
D + R+WD +TGK + + S
Sbjct: 222 DGTARIWDCKTGKCVKVIGS 241
Score = 34.3 bits (75), Expect = 0.084
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 242 LDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNS 352
+ VD QS ++ T GDS WD+E+GK T K +S
Sbjct: 165 MSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHS 201
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/97 (22%), Positives = 43/97 (44%)
Frame = +2
Query: 95 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLI 274
H + +T + ++R+G L S + D + +G+ L F GH + +I
Sbjct: 304 HSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRII 363
Query: 275 TGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSA 385
T D + ++WD +T + T K +R + S ++
Sbjct: 364 TASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNS 400
Score = 33.1 bits (72), Expect = 0.19
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Frame = +2
Query: 119 KYNREGDLLFSAAKDSKPNVWWSLNGERLG--------TFNGHGGVIWCLDVDWQSINLI 274
+++ +G L S++ D VW ++G+ +F H + C+D S L
Sbjct: 220 RFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLA 279
Query: 275 TGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNFSYSAYQAAYTT 406
+G D ++W + TG I ++S V + +FS Q T+
Sbjct: 280 SGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTS 324
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 86 LQGHQRAITQIKYNR-EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 262
L+GH + + ++ + +LFS + D N+ + LG+ +GH + +D
Sbjct: 196 LEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDG 255
Query: 263 INLITGGGDSSCRLWDLETGKNIATLKSNS 352
+ TG D + RLWDL+ I T+ +++
Sbjct: 256 GAIATGSSDRTVRLWDLKMRAAIQTMSNHN 285
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ-SIN 268
GH + + + G + S++ DS V+ + +W + + + +I
Sbjct: 58 GHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTIL 117
Query: 269 LITGGGDSSCRLWDLETGKNIATL 340
+ GG +S +LWD + + I+TL
Sbjct: 118 AVAGGSSASVKLWDTASWRLISTL 141
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 41.5 bits (93), Expect = 6e-04
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +2
Query: 74 KPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVD 253
KPL + + +I +N GD F V + + L T H +C+ +D
Sbjct: 141 KPLHRRKFNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSLKPLDTLTAHTAGCYCIAID 200
Query: 254 WQSINLITGGGDSSCRLWDLETGKNIATL-KSNSSVRTCNFSYSA-YQAAYTTD 409
+ G DS LWD+ + T K VRT +F+YS Y A+ + D
Sbjct: 201 PKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASED 254
Score = 38.7 bits (86), Expect = 0.004
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLFSAAKDSKPNVW-WSLNGERLG---TFNGHGGVIWCLDVDW 256
QGH++ + + +N G L S + D +W +G GH + L D
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDP 76
Query: 257 QSINLI-TGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSY 379
+ +L+ T GD S RLWD +GK T + S N +Y
Sbjct: 77 KHSDLVATASGDKSVRLWDARSGK--CTQQVELSGENINITY 116
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFN-GHGGVIWCLDVDWQS 262
L+GHQ + + +N G LL S + D + N+W + + L + + GH I+C ++
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 263 IN--LITGGGDSSCRLWD 310
+ +++G GD+ RL++
Sbjct: 106 SDELVVSGAGDAEVRLFN 123
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/104 (25%), Positives = 47/104 (45%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L+GH+ A+ ++R G + + + D +W L + GH G I L V +
Sbjct: 301 LRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNA 360
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAA 397
+ + D R+W L G I+ L+ ++ T ++S QA+
Sbjct: 361 LVASASNDFVIRVWRLPDGMPISVLRGHTGAVTA-IAFSPRQAS 403
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 268
+GH+ IT + + L+ SA+ D VW +G + GH G + + + +
Sbjct: 344 RGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQAS 403
Query: 269 ---LITGGGDSSCRLWD 310
L++ D +CR+WD
Sbjct: 404 VYQLLSSSDDGTCRIWD 420
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +2
Query: 119 KYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSC 298
K++R +L + +KP+ + + GH ++C D +ITG D
Sbjct: 271 KHHRAPSILSACHAIAKPSTMVQ-KMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLV 329
Query: 299 RLWDLETGKNIATLKSN 349
++W +ET +A+ + +
Sbjct: 330 KIWSMETALCLASCRGH 346
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 101 RAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV-DWQSINLIT 277
R + I ++ + + +A D + VW + +G + GH + LDV + ++
Sbjct: 598 RGVNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMS 657
Query: 278 GGGDSSCRLWDLETG 322
G D +WD+ G
Sbjct: 658 AGYDGKTIIWDIWEG 672
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 65 LNMKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 244
LN + +GH + +++ G S + D +W + L GH
Sbjct: 449 LNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGH-----LS 503
Query: 245 DVDWQ-SINLI-TGGGDSSCRLWDLETGK 325
DVDW + N I TG D + RLWD++TG+
Sbjct: 504 DVDWHPNCNYIATGSSDKTVRLWDVQTGE 532
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/80 (20%), Positives = 33/80 (41%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 271
GH+ + + + +G + S +D +W + GH +W L + L
Sbjct: 539 GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLL 598
Query: 272 ITGGGDSSCRLWDLETGKNI 331
+G D + +LWD+ + +
Sbjct: 599 ASGSADCTVKLWDVTSSTKL 618
Score = 37.1 bits (82), Expect = 0.012
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +2
Query: 71 MKPL-MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 247
++PL ++ GH ++ + ++ + + + + D +W GE + F GH ++ L
Sbjct: 492 IQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLA 548
Query: 248 VDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 382
+ + +G D + +WDL T + I L ++S + SYS
Sbjct: 549 MSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSC-VWSLSYS 592
Score = 33.5 bits (73), Expect = 0.15
Identities = 34/184 (18%), Positives = 71/184 (38%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 262
+L GH + ++ GD + S++ D+ +W + L + GH +W
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFG 472
Query: 263 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFV 442
+ D + R+W ++ + + + + S + + + Y A ++DK + ++
Sbjct: 473 HYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDWHPNCN-YIATGSSDKTV----RLWD 527
Query: 443 IDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHS 622
+ T G S V S+ + +G E G ++ WDL T + I
Sbjct: 528 VQTGECVRIFIGHR---------SMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITP 578
Query: 623 VKEH 634
+ H
Sbjct: 579 LMGH 582
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 181
L GH + + Y+ EG LL S + D +W
Sbjct: 579 LMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 610
Score = 27.5 bits (58), Expect = 9.6
Identities = 32/160 (20%), Positives = 63/160 (39%), Gaps = 3/160 (1%)
Frame = +2
Query: 191 NGERLGTFN-GHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKS-NSSVRT 364
NG R T GH G ++ +++ D++ RLW + N+ K N V
Sbjct: 406 NGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 465
Query: 365 CNFS-YSAYQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGS 541
FS + Y A+ + D+ ++ +D ++G + W + + + GS
Sbjct: 466 AQFSPFGHYFASCSHDRT----ARIWSMDRIQPLRIMAGHLSDVDWHPNCNYIAT---GS 518
Query: 542 LDETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQITDMQL 661
D+T+ WD++TG+ + H + + +
Sbjct: 519 SDKTVRL---------WDVQTGECVRIFIGHRSMVLSLAM 549
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 40.7 bits (91), Expect = 0.001
Identities = 41/195 (21%), Positives = 82/195 (42%), Gaps = 17/195 (8%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH---GGVIWCLDVD 253
+L+GH+ ++ + ++ LLF+ + D + +W ++ + + H GV+
Sbjct: 12 VLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASP 71
Query: 254 WQSIN-LITGGGDSSCRLWDLETG---KNIATLKSNSSVRTCNFSY-----SAYQAAYTT 406
W + +I+ G D + + WD+E G ++ + + C FS ++ Q A +
Sbjct: 72 WLGEDKIISQGRDGTVKCWDIEDGGLSRDPLLILETCAYHFCKFSLVKKPKNSLQEAESH 131
Query: 407 DKAM-----GHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHE 571
+ G C V + D E SG L + ++ T+ + + G +
Sbjct: 132 SRGCDEQDGGDTCNVQIADDSERSEEDSG----LLQDKDHAEGTTFV-------AVVGEQ 180
Query: 572 AGDLIQWDLRTGKKI 616
++ WDL TG KI
Sbjct: 181 PTEVEIWDLNTGDKI 195
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 554 IITGHEAGDLIQWDLRTGK-KIHSVKEHTHQITDMQLFS 667
++ G+E G ++ WD+R K + SVK H+ + + + S
Sbjct: 234 VLAGYEDGSILLWDIRNAKIPLTSVKFHSEPVLSLSVAS 272
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/89 (25%), Positives = 41/89 (46%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L+GH ++ + ++ + D++ S ++D VW + L TF W L V +
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVH-PEM 302
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSNS 352
NL+ G DS ++ LE + L +S
Sbjct: 303 NLLAAGHDSGMIVFKLERERPAFALSGDS 331
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/76 (21%), Positives = 33/76 (43%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L GH I ++++ E + SA+ D +W + + GH + C +
Sbjct: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKED 148
Query: 266 NLITGGGDSSCRLWDL 313
+++ D + R+WD+
Sbjct: 149 LVVSASLDQTVRVWDI 164
Score = 31.1 bits (67), Expect = 0.78
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWW--SLNGERLGTFNGHGGVIWCLDVDW 256
+L+GH R + ++ L+ S A D + +W + T GH + +
Sbjct: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 257 QSINLITGGGDSSCRLWDLETGKNIATLK 343
+ +++ D S R+WD + T +
Sbjct: 259 KQDIIVSNSEDKSIRVWDATKRTGLQTFR 287
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 191 NGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL-ETGKNIATLKSN-SSVRT 364
NG+ +GT GH + + TG D +CR+WD + +++A LK N +VR+
Sbjct: 308 NGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRS 367
Query: 365 CNFS 376
F+
Sbjct: 368 IRFT 371
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 191 NGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL-ETGKNIATLKSN-SSVRT 364
NG+ +GT GH + + TG D +CR+WD + +++A LK N +VR+
Sbjct: 302 NGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRS 361
Query: 365 CNFS 376
F+
Sbjct: 362 IRFT 365
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/93 (25%), Positives = 41/93 (44%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L+GH+ A+ +R G + + + D VW L + GH G I L V +I
Sbjct: 241 LRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNI 300
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSNSSVRT 364
+ + D R+W L G ++ L+ ++ T
Sbjct: 301 FIASASNDCVIRVWRLPDGLPVSVLRGHTGAVT 333
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVD---WQ 259
+GH+ IT + + + SA+ D VW +G + GH G + +
Sbjct: 284 RGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGS 343
Query: 260 SINLITGGGDSSCRLWD 310
L++ D +CR+WD
Sbjct: 344 PYQLLSSSDDGTCRIWD 360
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/51 (21%), Positives = 25/51 (49%)
Frame = +2
Query: 197 ERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSN 349
+ + GH ++C +D +ITG D ++W ++T +A+ + +
Sbjct: 236 QNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGH 286
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 101 RAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV-DWQSINLIT 277
R + I ++ + + +A D + VW + +G + + GH + +DV + ++
Sbjct: 545 RGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMS 604
Query: 278 GGGDSSCRLWDLETG 322
G D +WD+ G
Sbjct: 605 AGYDGKTIVWDIWEG 619
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L+GH ++ + ++ + D++ S ++D VW + + TF W L V I
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVH-PEI 302
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSNS 352
NL+ G D+ ++ LE + L +S
Sbjct: 303 NLLAAGHDNGMIVFKLERERPAFALSGDS 331
Score = 35.1 bits (77), Expect = 0.048
Identities = 16/76 (21%), Positives = 33/76 (43%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L GH I ++++ E + SA+ D +W + + GH + C +
Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
Query: 266 NLITGGGDSSCRLWDL 313
+++ D + R+WD+
Sbjct: 149 LVVSASLDQTVRVWDI 164
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWW--SLNGERLGTFNGHGGVIWCLDVDW 256
+L+GH R + ++ L+ S A D + +W + T GH + +
Sbjct: 199 VLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 257 QSINLITGGGDSSCRLWDLETGKNIATLK 343
+ +++ D S R+WD I T +
Sbjct: 259 KQDIIVSNSEDKSIRVWDATKRTGIQTFR 287
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L+GH+ I +K++ + L S D+K VW + + + F H + +
Sbjct: 288 LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHF 347
Query: 266 NLITGGG---DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 382
L+ GG D R W+ T ++ + +NS V CN +S
Sbjct: 348 GLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQV--CNLVWS 387
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 176 VWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL 313
VW +L T GH + L V ++TG GD + R W++
Sbjct: 406 VWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 149 SAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGK 325
S+ DS VW + F GH + +D +L +GG D+ CR+WDL K
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRK 205
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = +2
Query: 74 KPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVD 253
K ++L+GH+ +T + ++ D + A + W +G L TF G
Sbjct: 98 KIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKTDGTLLQTFKASSGF------- 150
Query: 254 WQSINLITGGGDSSCRLWDLETGKNIATLKSN-SSVRTCNFSYSAYQAA 397
DS R+WDL T +NI + + V + +FS + Y A
Sbjct: 151 -----------DSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLA 188
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 65 LNMKPLM--LQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVI 235
L M+ L+ + H ++Q+KY +E L +A+ D N+W + + + GH +
Sbjct: 201 LRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKV 260
Query: 236 WCLDV 250
LD+
Sbjct: 261 ASLDI 265
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 259
L+ QGH + + + ++ G L S +D++ +W + L H ++ + + Q
Sbjct: 166 LIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQ 225
Query: 260 S-INLITGGGDSSCRLWDLETGKNIATLKS 346
L T D + +W +G++ + +KS
Sbjct: 226 ERYFLATASHDMNVNIW---SGRDFSLVKS 252
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +2
Query: 83 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--VD 253
+ +GH + Q+ +N ++ + SA+ D +W + + T + H + C+D
Sbjct: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 254 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS 352
LITG D + ++WD +T + TL+ ++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
Score = 31.5 bits (68), Expect = 0.59
Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGD--LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 259
L HQ+ + + Y GD L + + D VW + T GH + + +
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
Query: 260 SINLITGGGDSSCRLWDLET 319
+ITG D + R+W T
Sbjct: 241 LPIIITGSEDGTVRIWHATT 260
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 244
L GHQ+ +T I D L++A+KD +W +G+ G N GG + C+
Sbjct: 140 LDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLN-LGGEVGCI 191
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG-TFNGHGGVIWCLDVDWQS 262
LQ H I + + L +A+ D +W +++G +L GH +W
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIW-NVDGFKLEKVLTGHQRWVWDCVFSVDG 265
Query: 263 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 367
L+T D + RLW + GK + + + C
Sbjct: 266 EFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVC 300
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWC 241
+L GHQR + ++ +G+ L +A+ D +W G+ + + GH C
Sbjct: 248 VLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVC 300
Score = 28.3 bits (60), Expect = 5.5
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Frame = +2
Query: 260 SINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDK-AMGHPCEV 436
S+ L T D + R W+ ETG+ T++ S + T DK + C
Sbjct: 5 SVILATASYDHTIRFWEAETGRCYRTIQYPDS--------HVNRLEITPDKHYLAAACNP 56
Query: 437 FVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLR 601
+ R D + P++ ++ + V ++ + + + +G E G + WDLR
Sbjct: 57 HI---RLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLR 108
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 654 CNFSRDGTMFITASKDHTAKLF 719
C FS DG +TAS D TA+L+
Sbjct: 259 CVFSVDGEFLVTASSDMTARLW 280
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW-WSLNGERLGTFNGH-GGVIWCLDVDW- 256
L GH+ + +++N GD+L S + D + +W W +L +GH V + +
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 257 QSINLITGGGDSSCRLWD-LETGK 325
+IT G D RL LE GK
Sbjct: 111 DDRTIITSGADGQVRLGQILENGK 134
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +2
Query: 83 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--VD 253
+ +GH + Q+ +N ++ + SA+ D +W + + T + H + C+D
Sbjct: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTG 196
Query: 254 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS 352
LITG D + ++WD +T + TL+ ++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGD--LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 259
L H + + + Y GD L + + D VW + T GH + + +
Sbjct: 181 LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPE 240
Query: 260 SINLITGGGDSSCRLWDLET 319
+ITG D + R+W T
Sbjct: 241 LPIIITGSEDGTVRIWHATT 260
>At1g29320.1 68414.m03584 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to meiotic recombination protein REC14
(GI:11139242) [Homo sapiens]; similar to unknown protein
GI:13623493 [Homo sapiens]
Length = 468
Score = 38.3 bits (85), Expect = 0.005
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 7/182 (3%)
Frame = +2
Query: 98 QRAITQIKYNREGDLLFSAAK--DSKPNVWWSLNGERLGTFNGHG-GVIWCLDVDWQSIN 268
+R+ T + ++GD+ + K D+ N S + T+ G G I VD
Sbjct: 121 ERSCTLLTCTKKGDVSLRSVKFPDAHGN---STDDASPKTWKACGSGEILVGKVDGSENF 177
Query: 269 LITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVID 448
+ GG +WDLE I + K F+ + + +A K H FV
Sbjct: 178 SLFGGKRVEANIWDLEQCTKIWSAKCPPKNNLGIFTPTWFTSATFLSKD-DH--RKFVTG 234
Query: 449 TRT----IDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKI 616
T++ + + + + P+L ++ ++ +TS+ TI G+ + DL +D+RTGK +
Sbjct: 235 TKSHQVRLYDISTQRRPVLSFDFRETAITSIAEDPDGHTIYVGNASADLASFDIRTGKLL 294
Query: 617 HS 622
S
Sbjct: 295 GS 296
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW-WSLNGERLG--TFNGHGGVIWCLDVDW 256
L GH + +T IK+ + DL+ +A+ D +W S +G T H + + V
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHA 319
Query: 257 QSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAY 388
+ ++ DS+ +DL +G +A + +++S N++ +A+
Sbjct: 320 TNKYFVSASLDSTWCFYDLSSGLCLAQV-TDASENDVNYTAAAF 362
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/76 (27%), Positives = 30/76 (39%)
Frame = +2
Query: 110 TQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGD 289
T ++ +G +L + S +W + + F GH G I + L T D
Sbjct: 358 TAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD 417
Query: 290 SSCRLWDLETGKNIAT 337
RLWDL KN T
Sbjct: 418 -GVRLWDLRKLKNFRT 432
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +2
Query: 83 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--VD 253
+ +GH + Q+ +N ++ + SA+ D +W + + T + H + C+D
Sbjct: 137 IFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 254 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS 352
LITG D + ++WD +T + TL ++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +2
Query: 83 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--VD 253
+ +GH + Q+ +N ++ + SA+ D +W + + T + H + C+D
Sbjct: 137 IFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 254 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS 352
LITG D + ++WD +T + TL ++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +2
Query: 83 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--VD 253
+ +GH + Q+ +N ++ + SA+ D +W + + T + H + C+D
Sbjct: 137 IFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 254 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS 352
LITG D + ++WD +T + TL ++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 37.9 bits (84), Expect = 0.007
Identities = 35/171 (20%), Positives = 72/171 (42%), Gaps = 5/171 (2%)
Frame = +2
Query: 95 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTF---NGHGGVIWCLDVDWQSI 265
H + I+Y+ +G + + D K ++ G+++G +GH G I+ + S
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 266 NLITGGGDSSCRLWDL-ETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFV 442
++T D S ++W++ E G + +K+ S + + + D H V +
Sbjct: 110 RVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDMLVGCLWQND----HLITVSL 165
Query: 443 IDTRTIDETVSGQAPILKWEITDSKVTSM-IWGSLDETIITGHEAGDLIQW 592
T ++ P L VTS+ + G +TI++ G +++W
Sbjct: 166 GGTMSLFSADDMDKPPLLLSGHIKNVTSLAVLGENQKTILSCSYDGLIVKW 216
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = +2
Query: 95 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW----CLDVDWQS 262
H A+ I+++ G+LL S A + +W E ++ H + + LD+ W
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 263 IN--LITGGGDSSCRLWDLETG 322
+ LI+G D+SC +WD+ G
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKG 144
Score = 28.3 bits (60), Expect = 5.5
Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 13/148 (8%)
Frame = +2
Query: 242 LDVDWQSIN--LITGGGDSSCRLWDLETG---KNIATLKSNSS-------VRTCNFSYSA 385
L VD+ I+ L T G D +LW + +G K + ++ SS V T FS S
Sbjct: 17 LTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSG 76
Query: 386 YQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQA-PILKWEITDSKVTSMIWGSLDETIIT 562
A D E+F+ + S + L + D V + W D +I+
Sbjct: 77 ELLASGADGG-----ELFIWKLHPSETNQSWKVHKSLSFHRKD--VLDLQWSPDDAYLIS 129
Query: 563 GHEAGDLIQWDLRTGKKIHSVKEHTHQI 646
G I WD+ G + H H +
Sbjct: 130 GSVDNSCIIWDVNKGSVHQILDAHCHYV 157
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = +2
Query: 95 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW----CLDVDWQS 262
H A+ I+++ G+LL S A + +W E ++ H + + LD+ W
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 263 IN--LITGGGDSSCRLWDLETG 322
+ LI+G D+SC +WD+ G
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKG 144
Score = 28.3 bits (60), Expect = 5.5
Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 13/148 (8%)
Frame = +2
Query: 242 LDVDWQSIN--LITGGGDSSCRLWDLETG---KNIATLKSNSS-------VRTCNFSYSA 385
L VD+ I+ L T G D +LW + +G K + ++ SS V T FS S
Sbjct: 17 LTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSG 76
Query: 386 YQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQA-PILKWEITDSKVTSMIWGSLDETIIT 562
A D E+F+ + S + L + D V + W D +I+
Sbjct: 77 ELLASGADGG-----ELFIWKLHPSETNQSWKVHKSLSFHRKD--VLDLQWSPDDAYLIS 129
Query: 563 GHEAGDLIQWDLRTGKKIHSVKEHTHQI 646
G I WD+ G + H H +
Sbjct: 130 GSVDNSCIIWDVNKGSVHQILDAHCHYV 157
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 36.7 bits (81), Expect = 0.016
Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 2/156 (1%)
Frame = +2
Query: 224 GGVIWCLDVDWQSINLITGGG-DSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAY 400
G ++ L +W++ N++ G D ++WD+ TGK T++ + ++ Y
Sbjct: 214 GQTLFFLTFNWENRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKK-----VHAVAWNNY 268
Query: 401 TTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDE-TIITGHEAG 577
T + + + V+ D + SG LKW T++KV + W E + + + G
Sbjct: 269 TPEVLLSGSRDRTVVLKDGRDPSNSG----LKWS-TEAKVEKLAWDPHSEHSFVVSLKDG 323
Query: 578 DLIQWDLRTGKKIHSVKEHTHQITDMQLFS*RHNVY 685
+ +D R S H H D ++ S +N++
Sbjct: 324 TVKGFDTRASDLSPSFIIHAH---DSEVSSISYNIH 356
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 36.7 bits (81), Expect = 0.016
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREG-DLLFSAAKDSKPNVWWSLNGER--LGTFNGH-GGVIWCLDVD 253
+ GH A T + YN +LL + +KD +W N E + T N + GG+ +
Sbjct: 365 INGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSP 424
Query: 254 WQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVR 361
L GG +LWD + N+++ + VR
Sbjct: 425 DNPFLLAMGGVMGELKLWDTLSDTNVSSRYGSREVR 460
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 268
+ H R + + +G L + D ++W E + F GH + CL + +
Sbjct: 219 KNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSE 278
Query: 269 LITGGGDSSCRLWDLE 316
L +G D + ++W++E
Sbjct: 279 LYSGSFDRTVKVWNVE 294
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 36.3 bits (80), Expect = 0.021
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 4/136 (2%)
Frame = +2
Query: 221 HGGV-IWCLDVDWQSINLI--TGGGDSSCRLWDLETGKNIA-TLKSNSSVRTCNFSYSAY 388
HGG IW +D + +LI +G D + ++WD G + T++ C+ + +
Sbjct: 164 HGGRRIWSVDYTLYNGSLIGASGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPF 223
Query: 389 QAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGH 568
+ V+ I R +D P++ + VT + TI+TG
Sbjct: 224 GGSSIAVGCADRNAYVYDI-RRLVD-------PLIVLDGHTKTVTYARFMD-SHTIVTGS 274
Query: 569 EAGDLIQWDLRTGKKI 616
G L QWD+ G+++
Sbjct: 275 TDGSLKQWDIDNGRRV 290
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 36.3 bits (80), Expect = 0.021
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD-VDWQS 262
L GH+ + +K++ + L S D++ VW + + + + H + + QS
Sbjct: 294 LVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQS 353
Query: 263 INLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 382
L +GGG D R W+ G + ++ + S V CN ++S
Sbjct: 354 SLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQV--CNLAWS 393
Score = 30.3 bits (65), Expect = 1.4
Identities = 34/181 (18%), Positives = 67/181 (37%), Gaps = 3/181 (1%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 271
G ++ +++ REG + + VW +R+ T GH L W S L
Sbjct: 213 GPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVL--AWNSRIL 270
Query: 272 ITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVIDT 451
+G D + D+ + + C +S + G+ ++ V +
Sbjct: 271 SSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASG---GNDNQLLVWNN 327
Query: 452 RTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIIT--GHEAGDLIQ-WDLRTGKKIHS 622
+ Q PILK + V ++ W +++ G A I+ W+ G +++S
Sbjct: 328 HS-------QQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNS 380
Query: 623 V 625
+
Sbjct: 381 I 381
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 176 VWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL 313
+W + ++ T GH + L ++TG GD + R W++
Sbjct: 412 LWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 35.9 bits (79), Expect = 0.028
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 203 LGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRT 364
L + GH G + C V Q L +G D + ++WDL T + I TLK ++ T
Sbjct: 251 LTSLEGHSGEVTCFAVGGQM--LYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVT 302
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 218 GHGGVIWCLD-VDWQSINLITGGGDSSCRLWDLETG 322
GH G + C V + +LIT GD +C LWD+ TG
Sbjct: 154 GHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 189
Score = 35.9 bits (79), Expect = 0.028
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLF-SAAKDSKPNVWWSLNGER-LGTFNGHGGVIWCLDVDWQSI 265
GH + + + F S + DS +W + R + TF+GH G + +
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 266 NLITGGGDSSCRLWDLETGKNI 331
TG D +CRL+D+ TG +
Sbjct: 262 RFGTGSDDGTCRLYDIRTGHQL 283
Score = 31.9 bits (69), Expect = 0.45
Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 3/138 (2%)
Frame = +2
Query: 209 TFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNFSYSA 385
T GH G ++ LD + +++ D +W+ T + +K + V TC FS +
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNG 119
Query: 386 YQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTS--MIWGSLDETII 559
A + C +F + + T D+ G P+ + S + D +I
Sbjct: 120 QSVAC---GGLDSVCSIFSLSS-TADK--DGTVPVSRMLTGHRGYVSCCQYVPNEDAHLI 173
Query: 560 TGHEAGDLIQWDLRTGKK 613
T I WD+ TG K
Sbjct: 174 TSSGDQTCILWDVTTGLK 191
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 515 KVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVK 628
KV S+ W I++ + G LI W+ T +K H++K
Sbjct: 67 KVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIK 104
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/78 (21%), Positives = 34/78 (43%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
LQGH + + + E + + SA++D + VW +L ++ +
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQ 120
Query: 266 NLITGGGDSSCRLWDLET 319
++ GG DS C ++ L +
Sbjct: 121 SVACGGLDSVCSIFSLSS 138
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 218 GHGGVIWCLD-VDWQSINLITGGGDSSCRLWDLETG 322
GH G + C V + +LIT GD +C LWD+ TG
Sbjct: 92 GHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 127
Score = 35.9 bits (79), Expect = 0.028
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLF-SAAKDSKPNVWWSLNGER-LGTFNGHGGVIWCLDVDWQSI 265
GH + + + F S + DS +W + R + TF+GH G + +
Sbjct: 140 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 199
Query: 266 NLITGGGDSSCRLWDLETGKNI 331
TG D +CRL+D+ TG +
Sbjct: 200 RFGTGSDDGTCRLYDIRTGHQL 221
Score = 33.5 bits (73), Expect = 0.15
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSA-AKDSKPNVWWSLNGE---RLGTF-NGHGGVIWCLDVDW 256
G +T I ++ G LLF+ A ++ VW +L GE LG + H I CL +
Sbjct: 230 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSA 289
Query: 257 QSINLITGGGDSSCRLW 307
L TG DS+ ++W
Sbjct: 290 DGSALCTGSWDSNLKIW 306
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 509 DSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVK 628
D +V S+ W I++ + G LI W+ T +K H++K
Sbjct: 3 DLQVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIK 42
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 218 GHGGVIWCLD-VDWQSINLITGGGDSSCRLWDLETG 322
GH G + C V + +LIT GD +C LWD+ TG
Sbjct: 154 GHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 189
Score = 35.9 bits (79), Expect = 0.028
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLF-SAAKDSKPNVWWSLNGER-LGTFNGHGGVIWCLDVDWQSI 265
GH + + + F S + DS +W + R + TF+GH G + +
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 266 NLITGGGDSSCRLWDLETGKNI 331
TG D +CRL+D+ TG +
Sbjct: 262 RFGTGSDDGTCRLYDIRTGHQL 283
Score = 33.5 bits (73), Expect = 0.15
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSA-AKDSKPNVWWSLNGE---RLGTF-NGHGGVIWCLDVDW 256
G +T I ++ G LLF+ A ++ VW +L GE LG + H I CL +
Sbjct: 292 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSA 351
Query: 257 QSINLITGGGDSSCRLW 307
L TG DS+ ++W
Sbjct: 352 DGSALCTGSWDSNLKIW 368
Score = 31.9 bits (69), Expect = 0.45
Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 3/138 (2%)
Frame = +2
Query: 209 TFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNFSYSA 385
T GH G ++ LD + +++ D +W+ T + +K + V TC FS +
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNG 119
Query: 386 YQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTS--MIWGSLDETII 559
A + C +F + + T D+ G P+ + S + D +I
Sbjct: 120 QSVAC---GGLDSVCSIFSLSS-TADK--DGTVPVSRMLTGHRGYVSCCQYVPNEDAHLI 173
Query: 560 TGHEAGDLIQWDLRTGKK 613
T I WD+ TG K
Sbjct: 174 TSSGDQTCILWDVTTGLK 191
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 515 KVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVK 628
KV S+ W I++ + G LI W+ T +K H++K
Sbjct: 67 KVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIK 104
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/78 (21%), Positives = 34/78 (43%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
LQGH + + + E + + SA++D + VW +L ++ +
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQ 120
Query: 266 NLITGGGDSSCRLWDLET 319
++ GG DS C ++ L +
Sbjct: 121 SVACGGLDSVCSIFSLSS 138
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 35.9 bits (79), Expect = 0.028
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSL---------NGERL--GTFNGHGGVIW 238
GH R++T + ++ + LL S ++D VW + G L FN H +
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVT 177
Query: 239 CLDVDWQSIN--LITGGGDSSCRLWDLETGK 325
+ +D+ N +I+ D +C++W L GK
Sbjct: 178 DIVIDYGGCNAVIISSSEDRTCKVWSLSRGK 208
Score = 34.7 bits (76), Expect = 0.064
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = +2
Query: 107 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGG 286
I + N EG L +W G+ L ++GH + CL L++G
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 287 DSSCRLWDL 313
D S R+W L
Sbjct: 141 DGSIRVWSL 149
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 35.9 bits (79), Expect = 0.028
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +2
Query: 71 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW-WSLNGERLGTFNGHGGVIWCLD 247
+K L G Q A+ +N EG +L + A+D V+ W L H V CL
Sbjct: 147 IKELRDVGQQLALA---FNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSSVK-CLT 202
Query: 248 VDWQSINLITGGGDSSCRLWDLETGKNIATL--KSNSSVRTCNFS 376
L++ GG CR+WD+ +A+L + + +C FS
Sbjct: 203 FSESGQFLVSLGGPV-CRVWDVNASAAVASLSKEKDEMFASCRFS 246
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 35.5 bits (78), Expect = 0.036
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 12/109 (11%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVW----WSLNGER--LGTFNGHGGVI----WC 241
GH + +K++ G L S D+ ++W S N R L F H + WC
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWC 293
Query: 242 LDVDWQSINLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 382
+Q+ L TGGG D W+ TG + ++++ S V C+ +S
Sbjct: 294 ---PFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQV--CSLLWS 337
Score = 28.7 bits (61), Expect = 4.2
Identities = 37/195 (18%), Positives = 70/195 (35%), Gaps = 7/195 (3%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSK-PNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 268
GH+ + + +N +L + D K N + +GT+ GH + L
Sbjct: 193 GHESRVGSLAWNNH--ILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKK 250
Query: 269 LITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVID 448
L +GG D+ +WD +L S++ R + + AA +
Sbjct: 251 LASGGNDNVVHIWD-------RSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATG 303
Query: 449 TRTIDETV----SGQAPILKWEITDSKVTSMIWGSLDETIITGH--EAGDLIQWDLRTGK 610
D + + L T S+V S++W + +++ H L W +
Sbjct: 304 GGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMV 363
Query: 611 KIHSVKEHTHQITDM 655
K+ + HT ++ M
Sbjct: 364 KMAELNGHTSRVLFM 378
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 35.5 bits (78), Expect = 0.036
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 13/110 (11%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVW-----WSLNGER--LGTFNGHGGVI----W 238
GH + +K++ G L S D+ ++W S N R L F H + W
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAW 275
Query: 239 CLDVDWQSINLITGG--GDSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 382
C +Q+ L TGG GD + W+ TG + ++++ S V C+ +S
Sbjct: 276 C---PFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV--CSLLWS 320
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 35.5 bits (78), Expect = 0.036
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 4/176 (2%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNG-HGGVIWCLDVDWQS 262
L+GH IT + YN + + L S + V +G R +G V+ LD S
Sbjct: 131 LKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQVLRLLDYSRSS 190
Query: 263 INL-ITGGGDSSCRLWDLETGKN--IATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCE 433
+L +T G D + LWD TG++ ++ LK +S+ T +S M
Sbjct: 191 RHLLVTAGDDGTVHLWD-TTGRSPKMSWLKQHSA-PTAGVCFSPSNEKIIASVGMDKKLY 248
Query: 434 VFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLR 601
+ +R ++ +AP +S+ +G ++ G G ++ +D+R
Sbjct: 249 TYDSGSRRSSSCIAYEAPF----------SSLAFGDNGYILVAGTSNGRVVFYDIR 294
Score = 33.1 bits (72), Expect = 0.19
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Frame = +2
Query: 104 AITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTF-----NGHGGVIWCLD-VDWQ-- 259
A+ +K+N ++ S +D K ++W NG+ LGT +G CL + +
Sbjct: 45 AVNSVKWNHTNLVVASTGEDKKISLWRK-NGQSLGTVPVTGKDGGDSAEECLSAISFSKK 103
Query: 260 -SINLITGGGDSSCRLWDLETGKNIATLKSNSSVRT 364
S + +GG ++WDL+ I LK ++S T
Sbjct: 104 GSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTIT 139
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 35.5 bits (78), Expect = 0.036
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 269 LITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNF 373
+ TG DSS ++DL +G +A LK +SS VR CN+
Sbjct: 416 IYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNW 451
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 35.1 bits (77), Expect = 0.048
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 170 PNVWWSLNGERLGTFNGHGGVIWCLDVDW-QSINLITGGGDSSCRLWDLETGKNIATLKS 346
P +SL+ + + +F GH + LD+ W +S L++ D + RLWD+ET +
Sbjct: 501 PETVFSLSDKPICSFTGHLDDV--LDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLFAH 558
Query: 347 NSSVRTCNFS 376
N V F+
Sbjct: 559 NDYVTCVQFN 568
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 181
+Q HQ I +K++ + LL SA +D +VW
Sbjct: 407 IQAHQGGIWTMKFSPDSHLLASAGEDCAIHVW 438
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 35.1 bits (77), Expect = 0.048
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +2
Query: 104 AITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGG 283
++ + +G LL ++ + S +G+ + + GH + + L TG
Sbjct: 250 SVNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGN 309
Query: 284 GDSSCRLWDLET-GKNIATLKSN-SSVRTCNFS 376
D++CRLWD+ ++ A LK N ++R F+
Sbjct: 310 QDTACRLWDIRNPSESFAVLKGNMGAIRGLKFT 342
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 34.7 bits (76), Expect = 0.064
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG---TFNGHGGVIWCLDVD 253
+L H+ + ++++ G L +A+ D +W L+ ++ T H + +
Sbjct: 219 ILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWS 278
Query: 254 WQSINLITGGGDSSCRLWDLETGKNIATLKSNSS 355
L+T G +LWD++TG T +N++
Sbjct: 279 PDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNT 312
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = +2
Query: 74 KPLMLQGHQRAITQIKY---NREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 244
+PL GH+++ I+ + + S ++DS+ +W N + L +GH + C
Sbjct: 432 QPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNC- 490
Query: 245 DVDWQSIN---LITGGGDSSCRLW 307
V W N L + D + R+W
Sbjct: 491 -VSWNPKNPRMLASASDDQTIRIW 513
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 34.3 bits (75), Expect = 0.084
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVW-WSLNGER-----LGTFNGHGGVI----WC 241
GH + +K++ G+ S D+ ++W SL + L F H + WC
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWC 309
Query: 242 LDVDWQSINLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 382
+Q+ L TGGG D + W+ TG + ++++ S V + +S S
Sbjct: 310 ---PFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQS 355
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 34.3 bits (75), Expect = 0.084
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Frame = +2
Query: 194 GERLGTFNGHGGVIWCLDVDWQSINLI-TGGGDSSCRLWDLETGKNIATLKSNSSVRTCN 370
GE + + GH + V W ++I + D S R WD+ETGK+ L ++ T +
Sbjct: 262 GEAVTSLVGHTQCV--SSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVD 319
Query: 371 F--SYSAYQAAYTTDKAMGHPCEVFVIDTRTIDETVSG-QAPILKWEITDSKVTSMIW-G 538
SA AA +D + R D G AP+ ++ S +++ W
Sbjct: 320 VGGESSALIAAGGSDPIL-----------RVWDPRKPGTSAPVFQFSSHSSWISACKWHK 368
Query: 539 SLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTHQI 646
S +++ G ++ WDLRT + + H ++
Sbjct: 369 SSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKV 404
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 95 HQRAITQIKYNREGDL-LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 271
H I+ K+++ L SA+ D K +W L + H + D W+ ++
Sbjct: 357 HSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADW-WKGESV 415
Query: 272 ITGGGDSSCRL 304
++GG DS+ R+
Sbjct: 416 VSGGADSNLRI 426
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 34.3 bits (75), Expect = 0.084
Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER----LGTF----NGHGGVIW 238
+L GH + + ++ D+LFS + D+ +W S + + + T NGH +W
Sbjct: 134 VLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVW 193
Query: 239 CLDVDWQSINLITGGGDSSCRLWDLETGK 325
+ + ++T D + ++W + +
Sbjct: 194 SISFNAAGDKMVTCSDDLAVKIWKTDISR 222
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGD-LLFSAAKDSKPNVW--------WSLN-GERLGTFNGHGGVI 235
L+GH + + +N D ++ S + D +W W+ G RLG+F+G+ V
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFDGNTCVW 75
Query: 236 WCLDVDWQSINLITG-GGDSSCRLWDLETGKNIATLKSNSSV 358
D +S++++ G + W+ +G +AT + SV
Sbjct: 76 ENFATDSESVSVLRGHESEVKSVSWN-ASGSLLATCGRDKSV 116
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 34.3 bits (75), Expect = 0.084
Identities = 22/102 (21%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L GH+ + +K++ + L S D++ VW + + + ++ H + +
Sbjct: 331 LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVH 390
Query: 266 NLITGGG---DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 382
L+ GG D R W+ T +++++ + S V CN ++S
Sbjct: 391 GLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQV--CNLAWS 430
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 176 VWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL 313
VW ++ T GH + L V ++TG GD + R W++
Sbjct: 449 VWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 506 TDSKVTSMIWG-SLDETIIT-GHEAGDLIQWDLRTGKKIHSVKEHTHQI 646
T S+V ++ W +++E + T G+ +I W T KI ++ HT+++
Sbjct: 420 TCSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRV 468
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 34.3 bits (75), Expect = 0.084
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 194 GERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLET-GKNIATLKSN-SSVRTC 367
G+ L T +GH + TG D +CR+WD+ K++A L+ N ++R+
Sbjct: 307 GKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSI 366
Query: 368 NFS 376
++
Sbjct: 367 RYT 369
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 34.3 bits (75), Expect = 0.084
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 221 HGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKN 328
H G + L + L++ G DS RLWD+E+G+N
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRN 346
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +2
Query: 149 SAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN---LITGGGDSSCRLWDLE 316
S ++DS+ +W G+ + GH G + C V W N L + D + R+W L+
Sbjct: 506 SGSEDSQVYIWHRSTGKLIVELPGHAGAVNC--VSWSPTNLHMLASASDDGTIRIWGLD 562
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 33.9 bits (74), Expect = 0.11
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +2
Query: 170 PNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGG-DSSCRLWDLETGKNIATLKS 346
P +S + + + + GH I LD+ W L+ D + RLWD+ET K L +
Sbjct: 488 PETVFSFSDKPVCSLKGHLDAI--LDLSWSKSQLLLSSSMDKTVRLWDIET-KTCLKLFA 544
Query: 347 NSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVIDTRTIDE 466
++ TC +S Y ++ ++ I R + E
Sbjct: 545 HNDYVTC-IQFSPVDENYFLSGSLDAKIRIWSIQDRHVVE 583
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 176 VWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDS-SCRLWDLETGKNIATLKSNS 352
VW + + H +W +D L+ G D S +LW + G +I T+K+ +
Sbjct: 560 VWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA 619
Query: 353 SVRTCNF 373
++ F
Sbjct: 620 NICCVQF 626
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 176 VWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDS-SCRLWDLETGKNIATLKSNS 352
VW + + H +W +D L+ G D S +LW + G +I T+K+ +
Sbjct: 560 VWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA 619
Query: 353 SVRTCNF 373
++ F
Sbjct: 620 NICCVQF 626
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE---RLGTFNGHGGVIWCLDVDWQS 262
G AI Q++Y+ G + +A+KD ++ ++ + +G +G V + Q
Sbjct: 172 GVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQR 231
Query: 263 INLITGGGDSSCRLWDLETGKNI 331
+++ G DS+ +LW++ +G+ +
Sbjct: 232 F-VLSSGKDSTVKLWEIGSGRMV 253
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE---RLGTFNGHGGVIWCLDVDWQS 262
G AI Q++Y+ G + +A+KD ++ ++ + +G +G V + Q
Sbjct: 264 GVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQR 323
Query: 263 INLITGGGDSSCRLWDLETGKNI 331
+++ G DS+ +LW++ +G+ +
Sbjct: 324 F-VLSSGKDSTVKLWEIGSGRMV 345
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 95 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTF-NGHGGVIWCLDVDWQSINL 271
H A++ + +R+G LL+S + D +W + + + L +F N H I + + ++ ++
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALS-ENGDI 222
Query: 272 ITGGGDSSCRLW 307
TG D ++W
Sbjct: 223 YTGSSDQRIKVW 234
>At5g05570.1 68418.m00605 transducin family protein / WD-40 repeat
family protein similar to unknown protein (pir||T04661);
contains Pfam PF00400: WD domain, G-beta repeat (4
copies, 2 weak)|8683726|gb|AV524198.1|AV524198
Length = 1124
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 443 IDTRTI-DETVSGQAPILKWEITDSKVTSMIWGSLDETIIT-GHEAGDLIQWDLRTGKK 613
++ +T+ D + + E+ +++S+ W S D +++ G+ GD++ WD G+K
Sbjct: 232 VEGKTVADSLEASHDELSNLELDGKEISSLCWASTDGSVLAVGYVDGDILFWDFSDGQK 290
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 212 FNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGK 325
+ GH G + + D + +G D S R+W++ETG+
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGR 456
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 33.5 bits (73), Expect = 0.15
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Frame = +2
Query: 218 GHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKS--------NSSVRTCNF 373
GH ++ L VD +++G D + R++D + G N + L+S VR+ ++
Sbjct: 175 GHTKIVSSLAVDSAGARVLSGSYDYTVRMYDFQ-GMN-SRLQSFRQIEPSEGHQVRSVSW 232
Query: 374 SYSAYQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGS---- 541
S ++ Q T A ++F D T+ E + G I + T + + G
Sbjct: 233 SPTSGQFLCVTGSAQA---KIFDRDGLTLGEFMKGDMYIRDLKNTKGHICGLTCGEWHPR 289
Query: 542 LDETIITGHEAGDLIQWDL 598
ET++T E G L WD+
Sbjct: 290 TKETVLTSSEDGSLRIWDV 308
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWW----SLNG-ERLGTFN-GHGGVIWC 241
L+L + IT ++++ +G + SA +D K V L G + +F GH I C
Sbjct: 149 LLLSHYCSIITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEFITC 208
Query: 242 LD-VDWQSIN---LITGGGDSSCRLWDLETGKNIAT 337
V + L++G GDS+ RLWD+ +G + T
Sbjct: 209 TAFVSTPELTQGYLMSGSGDSTVRLWDITSGSLLDT 244
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 33.1 bits (72), Expect = 0.19
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Frame = +2
Query: 68 NMKPL-MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE-----RL--GTFNGH 223
NM+ L +L G + +T ++++++G+ L++ + + W + +L T N +
Sbjct: 244 NMELLYVLHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDIRKSVEIVYKLYRATENTN 303
Query: 224 GGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAY 388
V + D++ +L TGG D ++DL+TG ++ ++ S FS+ Y
Sbjct: 304 QRVFF--DIEPCGRHLGTGGQDGLVHMYDLQTGNWVSGYQAASDTVNA-FSFHPY 355
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 32.7 bits (71), Expect = 0.26
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 5/154 (3%)
Frame = +2
Query: 194 GERLGTFNGHGGVIWCLDVDWQSINLI-TGGGDSSCRLWDLETGKNIATLKSNSSVRTCN 370
GE + + GH + V W ++I + D S R WD+ETGK+ L ++ T +
Sbjct: 262 GEAVTSLVGHTQCV--SSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVD 319
Query: 371 F--SYSAYQAAYTTDKAMGHPCEVFVIDTRTIDETVSG-QAPILKWEITDSKVTSMIW-G 538
SA AA +D + R D G AP+ ++ S +++ W
Sbjct: 320 VGGESSALIAAGGSDPIL-----------RVWDPRKPGTSAPVFQFSSHSSWISACKWHK 368
Query: 539 SLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTH 640
S +++ G ++ WDLRT + +HTH
Sbjct: 369 SSWFHLLSASYDGKIMLWDLRTA----VMTKHTH 398
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +2
Query: 134 GDLLFSAAKDSKPNVWW-SLNGE--RLGTFNGHGGVIWCLDVDWQSIN----LITGGGDS 292
G+++ S + D +W + G + G +GH G + CL ++ L +GG D
Sbjct: 328 GEMVCSGSADKSIGLWRREVTGMLCKFGVIHGHEGPVKCLQASPNNVGAGFMLYSGGLDK 387
Query: 293 SCRLWDLETGKNIATLKSN 349
S R+W + N+ KS+
Sbjct: 388 SLRVWWVPKQDNLEEKKSS 406
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 194 GERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLET-GKNIATLKSN-SSVRTC 367
G+ L T +GH + + TG D +CR+WD+ +++ LK N ++R+
Sbjct: 309 GKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSI 368
Query: 368 NFS 376
++
Sbjct: 369 RYT 371
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 497 WEITDSKVTSMIWGSLDETII-TGHEAGDLIQWDLRTGKKIHSVKEHTHQI 646
+E +S + + W +E + + E G L+ WD RT + H VK H ++
Sbjct: 213 YEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREV 263
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLF-SAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVD-WQS 262
+GH+ AI + ++ + + LF SA +D + +W + + H + L + +
Sbjct: 214 EGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNE 273
Query: 263 INLITGGGDSSCRLWDL 313
L T DS+ L+DL
Sbjct: 274 WVLATASSDSTVALFDL 290
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 32.7 bits (71), Expect = 0.26
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 170 PNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 307
P++ L +++ + +GH G +W ++ D + L + G D +LW
Sbjct: 262 PDLEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLW 307
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWS-LNGE 199
L GHQ + Q++++ G L S D +W S LNGE
Sbjct: 276 LSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNLNGE 314
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 32.3 bits (70), Expect = 0.34
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +2
Query: 374 SYSAYQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDET 553
++S+++ Y + ++ + D+ ++ P+ +E S + + W +E
Sbjct: 176 AWSSFKEGYLLSGSQDQRICLWDVSATATDKVLN---PMHVYEGHQSIIEDVAWHMKNEN 232
Query: 554 IITGHEAGD---LIQWDLRTGKKIHSVKEHTHQI 646
I AGD L+ WDLRT + H VK H +I
Sbjct: 233 IFGS--AGDDCQLVIWDLRTNQMQHQVKVHEREI 264
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 32.3 bits (70), Expect = 0.34
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +2
Query: 95 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLI 274
H AI I + + L +A+ D VW + G GH G + + + +L+
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 275 TGGGDSSC-RLWDL 313
G C LWDL
Sbjct: 187 VSGSRDGCFALWDL 200
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/86 (22%), Positives = 38/86 (44%)
Frame = +2
Query: 98 QRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLIT 277
Q AI I ++ +G L + +D ++ + + + G + C L+T
Sbjct: 303 QGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLT 362
Query: 278 GGGDSSCRLWDLETGKNIATLKSNSS 355
GG D ++W +E K +A + ++S
Sbjct: 363 GGEDDLVQVWSMEDRKVVAWGEGHNS 388
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 221 HGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKN 328
H GV+ L + L++ G S RLWD+E+G+N
Sbjct: 311 HYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRN 346
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 31.9 bits (69), Expect = 0.45
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL--DVDWQ 259
L GH++ ++ I D L++ +KD VW +G+ G GG I C+ + W
Sbjct: 147 LDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLK-LGGEIGCVLSEGPWL 205
Query: 260 SINLITGGGDSSCRLWDLET 319
+ G + + W++ET
Sbjct: 206 LV-----GMPNLVKAWNIET 220
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 203 LGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSV 358
L +GH ++ + + S L TG D + R+WD +G+ LK +
Sbjct: 144 LTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEI 195
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 31.9 bits (69), Expect = 0.45
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 12/110 (10%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLFSAAKDSKPNVW----WSLNG--ERLGTFNGHGGVI----W 238
+GH + + +K++ G L S D+ ++W S N + L H + W
Sbjct: 263 RGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW 322
Query: 239 CLDVDWQSINLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 382
C +Q+ L TGGG D + + W+ TG + ++ + S V C+ +S
Sbjct: 323 C---PFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQV--CSLLWS 367
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 31.9 bits (69), Expect = 0.45
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 12/110 (10%)
Frame = +2
Query: 89 QGHQRAITQIKYNREGDLLFSAAKDSKPNVW----WSLNG--ERLGTFNGHGGVI----W 238
+GH + + +K++ G L S D+ ++W S N + L H + W
Sbjct: 253 RGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW 312
Query: 239 CLDVDWQSINLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 382
C +Q+ L TGGG D + + W+ TG + ++ + S V C+ +S
Sbjct: 313 C---PFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQV--CSLLWS 357
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +2
Query: 98 QRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLIT 277
Q +I I ++ +G L + +D ++ L + + + G + C ++T
Sbjct: 303 QGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILT 362
Query: 278 GGGDSSCRLWDLETGKNIATLKSNSS 355
GG D ++W +E K +A + ++S
Sbjct: 363 GGEDDLVQVWSMEDRKVVAWGEGHNS 388
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 31.9 bits (69), Expect = 0.45
Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +2
Query: 89 QGHQRAITQIKYNREG----DLLFSAAKDSKPNVWWSLNGERLGTFN-GHGGVIWCLDVD 253
+GH + QI ++ + +L S + D W + + +++ + G+ I+
Sbjct: 80 KGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFSFSYG 139
Query: 254 WQSINLITGGGDSSCRLWDLETGKNIATLKSN 349
+ NL+ GG LWD K +A L+ +
Sbjct: 140 GAADNLLAGGCKEQVLLWDWRNSKQVACLEES 171
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 31.9 bits (69), Expect = 0.45
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERL----GTFNGHGGVIWCLDVD 253
L+ H+ A+ + N +G +LFS + D VW + G GH I L +
Sbjct: 276 LEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAI--LSLF 333
Query: 254 WQSINLITGGGDSSCRLW 307
S L++G D + R+W
Sbjct: 334 NVSDLLLSGSADRTVRIW 351
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG 208
+Q H+ +I IK++ +G L SA +D +W + ER G
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKG 399
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 497 WEITDSK-VTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEH 634
W I+ K VTS+ W + I G E G + D+ GK + ++K H
Sbjct: 59 WTISPGKPVTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPH 105
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 31.5 bits (68), Expect = 0.59
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +2
Query: 95 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFN---GHGGVIWCLDVDWQSI 265
H + +++ +G + + D K ++ E LG + GH G I+ +
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGK 245
Query: 266 NLITGGGDSSCRLWDL 313
++T D S ++WD+
Sbjct: 246 QVLTVSADKSAKIWDI 261
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 83 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE-RLGTFNGHGGVIWCLDVDWQ 259
+L+ H+ AI+ I+Y+ + + SA + + VW ++ E +L H I CL
Sbjct: 486 VLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPN 545
Query: 260 SINLITGGGDSSCRLWDLE 316
S + TG D+ +++++
Sbjct: 546 STMVATGSLDTCVIVYEVD 564
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 31.1 bits (67), Expect = 0.78
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 143 LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL 313
+FSA+ D +W + + F GH G + L L++ G D + RLW++
Sbjct: 72 IFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNV 128
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 31.1 bits (67), Expect = 0.78
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 452 RTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKK 613
+T D+T S W ++VT + + S + +G +AGD + W+L TGKK
Sbjct: 231 KTEDDTES--CTTFNWH--SAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGKK 280
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +2
Query: 101 RAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITG 280
R+ + I +G+++ D+ + S + L T GH + CL + + L+TG
Sbjct: 2627 RSSSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTG 2686
Query: 281 GGDSSCRLWDLETGKNIATLKSNSS 355
DS+ LW + T S S
Sbjct: 2687 SRDSTVLLWRIHKAFTSRTSVSEPS 2711
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 269 LITGGGDSSCRLWDLET-GKNIATLKSN-SSVRTCNFS 376
L TG D++CRLWD+ +++ LK N ++R F+
Sbjct: 334 LATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFT 371
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER 202
+Q H+ AI +K++ +G L SA +D VW + ER
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDER 285
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER 202
+Q H+ AI +K++ +G L SA +D VW + ER
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDER 285
>At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repeat
(PF00400); 42% similarity to fimbriae-associated protein
Fap1 (gi:3929312) [Streptococcus parasanguinis]
Length = 994
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 491 LKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHT 637
L+ E + S VTS+ + + ++ G+ G + WD++ + EHT
Sbjct: 472 LQGERSQSPVTSVCFNQIGSLLLAGYGDGHVTVWDMQRASIAKVITEHT 520
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 227 GVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNFSYSAY 388
GVI C+ + + L G D C +WD ET ++ N S + S+S Y
Sbjct: 24 GVIKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKY 78
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Frame = +2
Query: 116 IKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN--LITGGGD 289
+ +N G LL + D +W + V W L+ D
Sbjct: 29 VAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVSAAD 88
Query: 290 SSCRLWDLETGKNIA 334
S LWD+ TG+ IA
Sbjct: 89 KSLTLWDVSTGEKIA 103
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG 208
+Q H +I IK++ +G L SA +D ++W + E+ G
Sbjct: 409 IQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKG 449
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 30.7 bits (66), Expect = 1.0
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 5/139 (3%)
Frame = +2
Query: 248 VDWQSIN--LITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMG 421
VDWQ + L G S+ LWDLE + + ++ S S C + + + A G
Sbjct: 1133 VDWQQQSGYLYASGETSTVTLWDLEKEQLVRSVPSESE---CGVTALSASQVHGGQLAAG 1189
Query: 422 H-PCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDET-IITGHEAGDLIQWD 595
+ + D R+ + V P K + V LD +++ +AGD+ D
Sbjct: 1190 FADGSLRLYDVRSPEPLVCATRPHQK---VERVVGLSFQPGLDPAKVVSASQAGDIQFLD 1246
Query: 596 LRTGKKIH-SVKEHTHQIT 649
LRT + + ++ H +T
Sbjct: 1247 LRTTRDTYLTIDAHRGSLT 1265
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 30.3 bits (65), Expect = 1.4
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Frame = +2
Query: 92 GHQRAITQIKYNREGDLLFSAAKDSKPNVW--WSLNGER-----LGTFNGHGGVI----W 238
GH + +K++ G L S + ++W S+ + L F H + W
Sbjct: 247 GHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAW 306
Query: 239 CLDVDWQSINLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 382
C +Q+ L TGGG D + W+ TG + ++++ S V C+ +S
Sbjct: 307 C---PFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV--CSLLWS 351
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 95 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW-QSINL 271
H + + + +G +FS D + +W L+G + T H G I + W +NL
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAM--AWIPGMNL 128
Query: 272 I-TGGGDSSCRLWD 310
+ TG D + + WD
Sbjct: 129 LATGSWDKTLKYWD 142
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +2
Query: 188 LNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 367
++G+RL N + L QS NL+ DS RL+D+E+ L S +++ C
Sbjct: 1 MSGDRLEFENPIEDAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDC 60
Query: 368 NF 373
F
Sbjct: 61 CF 62
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +2
Query: 188 LNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 367
++G+RL N + L QS NL+ DS RL+D+E+ L S +++ C
Sbjct: 1 MSGDRLEFENPIEDAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDC 60
Query: 368 NF 373
F
Sbjct: 61 CF 62
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 215 NGHGGVIWCLDVDWQSINLITGGGDSSCRLW 307
NGH G IW L L TGG D ++W
Sbjct: 195 NGHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 191 NGERLGTFNGHGGVIWCLDVDWQSINLI-TGGGDSSCRLWDLETGKNIATLKSNSSVRT 364
N E + + GH +W D + NL+ TG D WD+ + NS V T
Sbjct: 152 NLETVQEWKGHDFELWTASFDLNNPNLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHT 210
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 29.9 bits (64), Expect = 1.8
Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 9/180 (5%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 265
L GH A+ + L+F++ DS +W G + G I L D +
Sbjct: 158 LYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALAADTKL- 216
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGH--PCEVF 439
L+ GG D W KS +R F + +Q T + GH P
Sbjct: 217 -LVAGGTDGFIHCW-----------KSLDGLRNL-FDLTGFQKEKTEFRLWGHEGPITSL 263
Query: 440 VIDTRTIDETVSGQAPILKWEITDSKV------TSMIWG-SLDETIITGHEAGDLIQWDL 598
+D +I + S + W+ + K + +WG + ET + D+ WD+
Sbjct: 264 ALDMTSI-FSGSWDMSVRIWDRSSMKCVKTLRHSDWVWGLAPHETTLASTSGSDVYIWDV 322
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +2
Query: 188 LNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 367
L+ + G + G W D +N + G+SS + WDL T K + +++ ++ VR
Sbjct: 160 LSKDSAGMLHSLSGGAW----DPHDVNAVAATGESSVQFWDLRTMKKVNSIE-HAHVRGV 214
Query: 368 NFSYSAYQAAYTTDKAMG 421
+++ T + G
Sbjct: 215 DYNPKREHILVTAEDESG 232
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 533 WGSLDETIITGHEAGDLIQWDLRTGKKIHSVKEHTH 640
W D + + WDLRT KK++S+ EH H
Sbjct: 176 WDPHDVNAVAATGESSVQFWDLRTMKKVNSI-EHAH 210
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +2
Query: 116 IKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGV-IWCLDVDW--QSINLITGGG 286
+K++ +G L+ D +V S G L TF+ LD + + + +++G G
Sbjct: 211 VKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSG 270
Query: 287 DSSCRLWDLETGKNI 331
D S W + +GK +
Sbjct: 271 DGSTHAWGVRSGKQV 285
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +2
Query: 116 IKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGV-IWCLDVDW--QSINLITGGG 286
+K++ +G L+ D +V S G L TF+ LD + + + +++G G
Sbjct: 208 VKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSG 267
Query: 287 DSSCRLWDLETGKNI 331
D S W + +GK +
Sbjct: 268 DGSTHAWGVRSGKQV 282
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 95 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL- 271
H + +K++++G L S D ++ G +F V+ + + N+
Sbjct: 204 HNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFK-EDEVVGVVKFHPDNCNVF 262
Query: 272 ITGGGDSSCRLWDLETGK 325
++GG S RLWD+ K
Sbjct: 263 LSGGSKGSLRLWDIRANK 280
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 248 VDWQSINLITGGGDSSCRLWDLETGKN 328
+ W+ +ITGG DS LWD G++
Sbjct: 157 IPWRPWEVITGGLDSKLVLWDFSKGRS 183
>At5g39760.1 68418.m04816 zinc finger homeobox protein-related /
ZF-HD homeobox protein-related predicted proteins,
Arabidopsis thaliana
Length = 334
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 285 PPPVMRLIDCQSTSRHHITPPWPLKVPRRSPFS 187
PPP ++ Q RHH PP P P RSP S
Sbjct: 118 PPPPSTAVEYQPHHRHHPPPP-PPPPPPRSPNS 149
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +2
Query: 80 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 181
+ L+GH+ A+T + ++ + + +A+KD VW
Sbjct: 283 MQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVW 316
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 266 NLITGGGDSSCRLWDLETGKNIATLKSNSSV 358
++ TG GD++ + W L+ G + T+ + SV
Sbjct: 599 HVYTGSGDNTIKAWSLQDGSLLCTMSGHKSV 629
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +2
Query: 116 IKYNREGDLLFSAAKDSKPNVW-WSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDS 292
+ +N++G +L + A+D V+ W L H V L +S + G
Sbjct: 148 LSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHASVK-SLTFS-ESGKFLVSLGAP 205
Query: 293 SCRLWDLETGKNIATL--KSNSSVRTCNFS 376
CR+WD+ IA+L + + +C FS
Sbjct: 206 LCRVWDVNASAAIASLSKEKDEMFASCRFS 235
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +2
Query: 116 IKYNREGDLLFSAAKDSKPNVW-WSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDS 292
+ +N++G +L + A+D V+ W L H V L +S + G
Sbjct: 148 LSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHASVK-SLTFS-ESGKFLVSLGAP 205
Query: 293 SCRLWDLETGKNIATL--KSNSSVRTCNFS 376
CR+WD+ IA+L + + +C FS
Sbjct: 206 LCRVWDVNASAAIASLSKEKDEMFASCRFS 235
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +2
Query: 104 AITQIKYNREGDLLFSAAKDSKPNVWWSLNG-ERLGTFNGHGGVIWCLDVDWQSINLITG 280
A+T I ++ L++ + D N W N + G GH + CL + +G
Sbjct: 302 AVTAIAVDQSATLVYCGSSDGTVNFWERENNMKNGGVLKGHKLAVLCLVAAGNL--MFSG 359
Query: 281 GGDSSCRLW 307
D R+W
Sbjct: 360 SADLGIRVW 368
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 203 LGTFNGHGGVIWCLDVD-WQSINLITGGGDSSCRLWDLETGKNIATLKSN 349
LG + G + W D + L++G D+ +W+L G+NI TLK +
Sbjct: 63 LGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 143 LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 307
L S + D+ VW +NGE + T GH + + +D + I ++ D + + W
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDI--VSSSVDQTLKRW 138
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 137 DLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 307
DL F +A W+L+GE L GH +++ +D + +++ D ++W
Sbjct: 201 DLGFLSASHDGSIRLWALSGEVLLEMVGHTSLVYSVDAHSSGL-IVSASEDRHAKIW 256
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 203 LGTFNGHGGVIWCLDVD-WQSINLITGGGDSSCRLWDLETGKNIATLKSN 349
LG + G + W D + L++G D+ +W+L G+NI TLK +
Sbjct: 63 LGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 143 LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 307
L S + D+ VW +NGE + T GH + + +D + I ++ D + + W
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDI--VSSSVDQTLKRW 138
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 137 DLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 307
DL F +A W+L+GE L GH +++ +D + +++ D ++W
Sbjct: 201 DLGFLSASHDGSIRLWALSGEVLLEMVGHTSLVYSVDAHSSGL-IVSASEDRHAKIW 256
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNG 196
L+GHQ+ +T + ++ ++L S+ DS+ V WS++G
Sbjct: 925 LKGHQKRVTGLAFSNVLNVLVSSGADSQLCV-WSMDG 960
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 86 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNG 196
L+GHQ+ +T + ++ ++L S+ DS+ V WS++G
Sbjct: 925 LKGHQKRVTGLAFSNVLNVLVSSGADSQLCV-WSMDG 960
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +2
Query: 134 GDLLFSAAKDSKPNVWWSLNGER--LGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 307
G LLFS A D K VW + GH G + CL V S GGD L+
Sbjct: 276 GKLLFSGAADKKICVWRREGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLY 335
Query: 308 DLETGKNI 331
K++
Sbjct: 336 SGSLDKSV 343
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +2
Query: 242 LDVDWQSIN--LITGGGDSSCRLWDLETG 322
LD+ W + LI+G D+SC +WD+ G
Sbjct: 57 LDLQWSPDDAYLISGSVDNSCIIWDVNKG 85
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 68 NMKPLM-LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 244
N K +M L+GH + + ++ + +L S + D+ ++W G GH ++
Sbjct: 107 NWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLV--K 164
Query: 245 DVDWQSIN--LITGGGDSSCRLW 307
V W I + + D + +W
Sbjct: 165 GVTWDPIGSFIASQSDDKTVIIW 187
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = +2
Query: 101 RAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITG 280
R+ ++ +G L S D + G+ L GH W + + ++
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVAS 163
Query: 281 GG-DSSCRLWDLETGKNIAT 337
G D RLW+ +TG+ I T
Sbjct: 164 GSLDHEVRLWNAKTGECIRT 183
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = +2
Query: 101 RAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITG 280
R+ ++ +G L S D + G+ L GH W + + ++
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVAS 163
Query: 281 GG-DSSCRLWDLETGKNIAT 337
G D RLW+ +TG+ I T
Sbjct: 164 GSLDHEVRLWNAKTGECIRT 183
>At5g23070.1 68418.m02697 thymidine kinase, putative similar to
thymidine kinase [Oryza sativa] SWISS-PROT:O81263
Length = 282
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 302 LWDLETGKNIATLKSNSSVRTCNFS 376
L + ETGK IA +KSN R C S
Sbjct: 99 LAERETGKRIAIIKSNKDTRYCTES 123
>At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1
significant, 2 weak WD-40 repeats (PF00400); similar to
transducin beta-like 1 protein.(SP:O60907) [Homo
sapiens]
Length = 467
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/73 (24%), Positives = 38/73 (52%)
Frame = +2
Query: 206 GTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSA 385
G N H + + +D + I ++GG D R+W +++G+ ++ K ++SV + +SA
Sbjct: 384 GHVNSHTPIEFGIDPSERFI--LSGGDDCYTRIWSIKSGQLMSENKFSNSVPSV-VCWSA 440
Query: 386 YQAAYTTDKAMGH 424
+ ++GH
Sbjct: 441 DERQRDRKDSIGH 453
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +2
Query: 269 LITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 367
+++G GD + W++E +A ++N V +C
Sbjct: 259 VLSGSGDGTLHAWNIENPSEVARWENNIGVVSC 291
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 227 GVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSN 349
G I+ + VD S ++T G D ++D+E+GK + + K +
Sbjct: 527 GTIYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVRSFKQD 567
>At4g13630.1 68417.m02121 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 581
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 366 HVLTEELDLSVAIFLPVSRSHNLQELSPPPVMRLIDCQSTSRHHITPPW 220
H L +E+D +FL + HN + P + RL + IT PW
Sbjct: 320 HFLEKEVDTYRQMFLETEQPHNTPDSKPAQIERL-----QTPQQITEPW 363
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 269 LITGGGDSSCRLWDLETGKNI 331
LI+G D + R+WDLE+G I
Sbjct: 552 LISGSMDCTIRIWDLESGNVI 572
>At3g04660.1 68416.m00499 F-box family protein contains F-box domain
Pfam:PF00646
Length = 390
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2
Query: 321 PVSRSHNLQELSPPPVMRLIDCQSTSRHH 235
P++ H + L P R+++C+ RHH
Sbjct: 193 PMTEEHQVFTLGPKQKWRMLECKYLHRHH 221
>At2g25800.1 68415.m03096 expressed protein
Length = 996
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 330 IFLPVSRSHNLQELSPPPVMRLIDCQSTSRHHITPPWPL 214
+F +S H+ +E +PPP +S+S PP PL
Sbjct: 4 LFRELSLGHSKRESTPPPPSHSATSRSSSMSSDLPPSPL 42
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,100,995
Number of Sequences: 28952
Number of extensions: 383464
Number of successful extensions: 1782
Number of sequences better than 10.0: 169
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1677
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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