Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0976
         (689 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16IZ7 Cluster: Putative uncharacterized protein; n=1; ...    76   9e-13
UniRef50_Q7KVF6 Cluster: CG33228-PA; n=1; Drosophila melanogaste...    53   6e-06
UniRef50_A2EHC3 Cluster: Putative uncharacterized protein; n=1; ...    37   0.53 
UniRef50_P34968 Cluster: 5-hydroxytryptamine receptor 2C; n=9; E...    35   2.2  
UniRef50_A6EJ66 Cluster: Sensor protein; n=1; Pedobacter sp. BAL...    33   6.6  
UniRef50_Q22DJ7 Cluster: Insect antifreeze protein; n=3; Tetrahy...    33   8.7  

>UniRef50_Q16IZ7 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 221

 Score = 75.8 bits (178), Expect = 9e-13
 Identities = 40/149 (26%), Positives = 83/149 (55%), Gaps = 1/149 (0%)
 Frame = +3

Query: 246 QDRWREMDNVSKRWKLIYRAPMDNVLNFVXXXXXXXXXXI-GLSGLYYGMFVFDQADLNN 422
           ++R+R+ DNV + +++IYRAPM+  L+            + G++   YG ++ D   ++ 
Sbjct: 50  EERYRKKDNVPEEYRIIYRAPMEYYLSACNLATTFSFAAVAGITA--YG-YLHDYHTMSV 106

Query: 423 PVLLGDNVVIANDPIECIVYLGSFIAFHVAVKVLLSKYVIRLYQDGDDYLAVFRGHIYNS 602
           P  +    +  N+  + I++LG F   +V ++V++++YV+R+Y++ DDY+A+F G    +
Sbjct: 107 PFEIDYGSLTVNEN-DLIIFLGFFFLANVMIRVMVNRYVLRIYRNEDDYIAIFEGRFPFT 165

Query: 603 IKKHKFHLNEFKKLNPTFVVTWGDGRFSL 689
            ++ +F       +    +V W D RF +
Sbjct: 166 RRELRFKRGNVVPVPEGGIVPWQDARFKI 194


>UniRef50_Q7KVF6 Cluster: CG33228-PA; n=1; Drosophila
           melanogaster|Rep: CG33228-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 229

 Score = 53.2 bits (122), Expect = 6e-06
 Identities = 29/132 (21%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
 Frame = +3

Query: 267 DNVSKRWKLIYRAPMDNVLNFVXXXXXXXXXXIGLSGLYYGMFVFDQADLNNPVLLGDNV 446
           D +   +KLIYRAP+++ + +           +     Y+     +  D+   +   D  
Sbjct: 65  DRLPDNYKLIYRAPIESYVTWTKNISTATTTVLAAVAAYHYATTINYLDMVQKM---DIA 121

Query: 447 VIANDPIECIVYLGSFIAFHVAVKVLLSKYVIRLYQDGDDYLAVFRGHIYNSIKKHKF-- 620
           ++ +   +   ++G F+  ++A++  ++KY +R+Y+  + Y+AV+   +     KH F  
Sbjct: 122 ILVSQESDLYYFVGGFLLINLAIRAFVAKYPLRIYKSSEKYVAVYGSQLPIGTVKHYFER 181

Query: 621 -HLNEFKK-LNP 650
             + E+K  LNP
Sbjct: 182 GQIAEYKNFLNP 193


>UniRef50_A2EHC3 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 809

 Score = 36.7 bits (81), Expect = 0.53
 Identities = 16/66 (24%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
 Frame = +3

Query: 390 MFVF-DQADLN-NPVLLGDNVVIANDPIECIVYLGSFIAFHVAVKVLLSKYVIRLYQDGD 563
           +F+F ++ DL+ +P +L + + + + PI+CI+  G+FI + +  ++  S ++  +  + +
Sbjct: 351 LFIFINKFDLDFDPNVLIERINVIDSPIKCIIAKGNFIRYVIKKEICDSDFIQAILNENN 410

Query: 564 DYLAVF 581
            YL ++
Sbjct: 411 SYLLIY 416


>UniRef50_P34968 Cluster: 5-hydroxytryptamine receptor 2C; n=9;
           Euteleostomi|Rep: 5-hydroxytryptamine receptor 2C - Mus
           musculus (Mouse)
          Length = 459

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = +3

Query: 426 VLLGDNVVIANDPIECIVYLGSFIAFHVAVKVLLSKYVIRLYQDGDDYLAVFRGHIYNSI 605
           V + +   + NDP    V +GSF+AF + + +++  Y + +Y      L + RGH    +
Sbjct: 201 VFVNNTTCVLNDPN--FVLIGSFVAFFIPLTIMVITYFLTIYVLRRQTLMLLRGHTEEEL 258

Query: 606 K 608
           +
Sbjct: 259 R 259


>UniRef50_A6EJ66 Cluster: Sensor protein; n=1; Pedobacter sp.
           BAL39|Rep: Sensor protein - Pedobacter sp. BAL39
          Length = 1437

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 22/57 (38%), Positives = 31/57 (54%)
 Frame = +3

Query: 375 GLYYGMFVFDQADLNNPVLLGDNVVIANDPIECIVYLGSFIAFHVAVKVLLSKYVIR 545
           G  YG+ VFD   L N VLL DN  ++ND I  ++  G   A  ++    LSKY ++
Sbjct: 573 GTNYGLNVFDPYHLTNEVLLSDN-GLSNDAIGAVIGDGRG-AVWISTNKGLSKYNLK 627


>UniRef50_Q22DJ7 Cluster: Insect antifreeze protein; n=3;
           Tetrahymena thermophila SB210|Rep: Insect antifreeze
           protein - Tetrahymena thermophila SB210
          Length = 807

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 387 GMFVF-DQADLNNPVLLGDNVVIANDPIECIVYLGSFI 497
           G FVF D + LN     GD ++  N+P++ I YLG+ I
Sbjct: 137 GQFVFFDASTLNTIPATGDQLLNTNNPLDIIQYLGNLI 174


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,561,675
Number of Sequences: 1657284
Number of extensions: 13566097
Number of successful extensions: 30024
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30016
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)