Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0975
(342 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68270-5|CAA92570.1| 174|Caenorhabditis elegans Hypothetical pr... 32 0.12
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 29 0.87
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 29 0.87
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 29 0.87
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 29 0.87
AL132948-45|CAD31822.2| 542|Caenorhabditis elegans Hypothetical... 27 4.7
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 27 4.7
Z82280-9|CAB05263.3| 415|Caenorhabditis elegans Hypothetical pr... 26 6.1
Z82275-2|CAC42314.2| 415|Caenorhabditis elegans Hypothetical pr... 26 6.1
Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical pr... 26 6.1
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 26 8.1
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z68014-13|CAA92028.2| 582|Caenorhabditis elegans Hypothetical p... 26 8.1
U41510-6|AAK39382.1| 454|Caenorhabditis elegans Hypothetical pr... 26 8.1
U37430-5|AAB52674.2| 389|Caenorhabditis elegans Set (trithorax/... 26 8.1
U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical pr... 26 8.1
AY887916-1|AAX34428.1| 582|Caenorhabditis elegans anion transpo... 26 8.1
>Z68270-5|CAA92570.1| 174|Caenorhabditis elegans Hypothetical
protein ZC410.5a protein.
Length = 174
Score = 31.9 bits (69), Expect = 0.12
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +1
Query: 73 QGIWYEISKFPNESEKNGK--CSSAEYKLEGDVVKVKNVHIIDGVKKYIEGTAKLTDDAN 246
QG+ ++ F + +N K S+ + +LE +V +VK+ ++ G+K+ ++G L +DA
Sbjct: 36 QGVTSDVGNFFSNQFQNAKDLFSNDQNELEKNVQRVKD--LLTGLKEKVKGLEPLANDAQ 93
Query: 247 KAAKLTVTFKFGEIS 291
K V E+S
Sbjct: 94 KETLKKVDGFLAEVS 108
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 29.1 bits (62), Expect = 0.87
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 22 GTCPELKPVNNFNLTAYQGIWYEIS-KFPNESEKNGKCSSAEYKLE 156
G L P N NL + + +S + PN++ + KCS+ YKLE
Sbjct: 2421 GCAAPLSPPTNLNLASPSNVQVRVSWQAPNQN--SWKCSAIRYKLE 2464
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 29.1 bits (62), Expect = 0.87
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 22 GTCPELKPVNNFNLTAYQGIWYEIS-KFPNESEKNGKCSSAEYKLE 156
G L P N NL + + +S + PN++ + KCS+ YKLE
Sbjct: 2421 GCAAPLSPPTNLNLASPSNVQVRVSWQAPNQN--SWKCSAIRYKLE 2464
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 29.1 bits (62), Expect = 0.87
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 22 GTCPELKPVNNFNLTAYQGIWYEIS-KFPNESEKNGKCSSAEYKLE 156
G L P N NL + + +S + PN++ + KCS+ YKLE
Sbjct: 2421 GCAAPLSPPTNLNLASPSNVQVRVSWQAPNQN--SWKCSAIRYKLE 2464
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 29.1 bits (62), Expect = 0.87
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 22 GTCPELKPVNNFNLTAYQGIWYEIS-KFPNESEKNGKCSSAEYKLE 156
G L P N NL + + +S + PN++ + KCS+ YKLE
Sbjct: 2421 GCAAPLSPPTNLNLASPSNVQVRVSWQAPNQN--SWKCSAIRYKLE 2464
>AL132948-45|CAD31822.2| 542|Caenorhabditis elegans Hypothetical
protein Y39B6A.25 protein.
Length = 542
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 249 FIGIVGELGRPFYILLDAVDDMHVLDLHHVT 157
F I+ E F + + +VD+ H++DL+H T
Sbjct: 206 FKNIIEECQALFRVEIKSVDEPHLIDLYHPT 236
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 190 IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGE 285
+DG+ +E TAK+T D + L VTF+ G+
Sbjct: 16 VDGIN--VECTAKVTSDGVERRSLRVTFENGD 45
>Z82280-9|CAB05263.3| 415|Caenorhabditis elegans Hypothetical
protein R05A10.1 protein.
Length = 415
Score = 26.2 bits (55), Expect = 6.1
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = +1
Query: 46 VNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKLEGDVVKVK----NVHIIDGVKKYI 213
++ F + G+ + P E KNGK + E ++ K V+ I+G K+
Sbjct: 28 LHEFQMNNSAGVMSALEMLPKECSKNGKKYQPNEEFEIGNLRYKCQKYGVYTIEGCKRKD 87
Query: 214 EGTAKLTDDA 243
T KL + A
Sbjct: 88 GTTMKLGESA 97
>Z82275-2|CAC42314.2| 415|Caenorhabditis elegans Hypothetical
protein R05A10.1 protein.
Length = 415
Score = 26.2 bits (55), Expect = 6.1
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = +1
Query: 46 VNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKLEGDVVKVK----NVHIIDGVKKYI 213
++ F + G+ + P E KNGK + E ++ K V+ I+G K+
Sbjct: 28 LHEFQMNNSAGVMSALEMLPKECSKNGKKYQPNEEFEIGNLRYKCQKYGVYTIEGCKRKD 87
Query: 214 EGTAKLTDDA 243
T KL + A
Sbjct: 88 GTTMKLGESA 97
>Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical
protein F23A7.7 protein.
Length = 965
Score = 26.2 bits (55), Expect = 6.1
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = +1
Query: 58 NLTAYQGIWYEISKFPNESEKNGKCSSAEY------KLEGDVVKVKNVHIIDGVKKYIEG 219
N+ + GI Y I +PN++ + E K+ G ++ N H+ +KKY
Sbjct: 686 NIVYHDGIRYSI--YPNKNTDDSNIMFFEGIRVRFGKIVGILINKDNTHLRFILKKYCNT 743
Query: 220 TAKLTDDANKAAK 258
L D +NK A+
Sbjct: 744 NEHLLDISNKMAQ 756
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 109 ESEKNGKCSSAEYKLEGDVVKVKNVHIIDGVKKYIE 216
E +GK + K GD V V ++I+ V KY E
Sbjct: 2751 EQSADGKAVTVNLKPNGDEVLVNKDNVIEYVYKYAE 2786
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 109 ESEKNGKCSSAEYKLEGDVVKVKNVHIIDGVKKYIE 216
E +GK + K GD V V ++I+ V KY E
Sbjct: 2751 EQSADGKAVTVNLKPNGDEVLVNKDNVIEYVYKYAE 2786
>Z68014-13|CAA92028.2| 582|Caenorhabditis elegans Hypothetical
protein W04G3.6d protein.
Length = 582
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -1
Query: 147 VFS*RAFAVLLRFVGKFRDFIPDALVSCQVEVVHR 43
+FS ++L F+G++ + +P L+SC V V R
Sbjct: 363 IFSALVLTLVLFFIGQYLEGLPMCLLSCIVIVALR 397
>U41510-6|AAK39382.1| 454|Caenorhabditis elegans Hypothetical
protein ZC449.1 protein.
Length = 454
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 94 SKFPNESEKNGKCSSAEYKLEGDVVKVK 177
S+ + S NG S +YK+ G+ V+V+
Sbjct: 415 SESESSSPSNGGWSECDYKINGETVRVR 442
>U37430-5|AAB52674.2| 389|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 12
protein.
Length = 389
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 162 RGEGQERAYHRRRQEVYRRDGQAH 233
RGE +A H +R + Y++DG H
Sbjct: 126 RGEAITKAEHNKRVKRYKKDGIKH 149
>U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical
protein C18H9.3 protein.
Length = 918
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 79 IWYEISKFPNESEKNGKCSSAEYKLEGDVVKV 174
+W++ F +ES + + + EYK GD+ K+
Sbjct: 399 VWFKAGYFTDESLRVQRGENGEYKTIGDLKKL 430
>AY887916-1|AAX34428.1| 582|Caenorhabditis elegans anion
transporter SULP-7d protein.
Length = 582
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -1
Query: 147 VFS*RAFAVLLRFVGKFRDFIPDALVSCQVEVVHR 43
+FS ++L F+G++ + +P L+SC V V R
Sbjct: 363 IFSALVLTLVLFFIGQYLEGLPMCLLSCIVIVALR 397
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,405,249
Number of Sequences: 27780
Number of extensions: 138264
Number of successful extensions: 442
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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