BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0975 (342 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 27 0.047 DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 22 1.8 DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 5.4 DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 5.4 AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 5.4 M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 20 9.5 DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 20 9.5 >AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase beta-3 protein. Length = 832 Score = 27.5 bits (58), Expect = 0.047 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%) Frame = -1 Query: 246 IGIVGELGRPFY---ILLDAVDDMHVLDLHHVTFQFVFS*RAF 127 +G + E+ R FY + ++ V + + D HVTF+ F RAF Sbjct: 145 MGQIREVARHFYHKELQIELVREEILFDTVHVTFKLTFDNRAF 187 >DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain protein protein. Length = 448 Score = 22.2 bits (45), Expect = 1.8 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Frame = -3 Query: 109 RWEISRFHTRC--LGKLSS*SCSPVSARGRCLRE*LQQ 2 RW++ +FH C +G S S V A GR E Q+ Sbjct: 186 RWDLGKFHRVCTQIGS-SMKSVGEVMAIGRKFEEAFQK 222 >DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase isoform B protein. Length = 931 Score = 20.6 bits (41), Expect = 5.4 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +2 Query: 269 LLSLEKYLAMDQCIILATD 325 LLSLEK D C +LA+D Sbjct: 439 LLSLEKTYERDTC-LLASD 456 >DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase isoform A protein. Length = 969 Score = 20.6 bits (41), Expect = 5.4 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +2 Query: 269 LLSLEKYLAMDQCIILATD 325 LLSLEK D C +LA+D Sbjct: 477 LLSLEKTYERDTC-LLASD 494 >AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase protein. Length = 1143 Score = 20.6 bits (41), Expect = 5.4 Identities = 6/13 (46%), Positives = 8/13 (61%) Frame = +3 Query: 279 WRNISRWISALSW 317 WRN +R I + W Sbjct: 120 WRNATRCIGRIQW 132 >M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-containing gene,partial cds, clone H17. ). Length = 79 Score = 19.8 bits (39), Expect = 9.5 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +2 Query: 242 PIKPQS*QSLLSLEKYLAMDQCIILA 319 P P + Q LLSLEK Q + +A Sbjct: 12 PRTPFTTQQLLSLEKKFREKQYLTIA 37 >DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein protein. Length = 486 Score = 19.8 bits (39), Expect = 9.5 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = +1 Query: 43 PVNNFNLTAYQGI 81 PVNN NL Q I Sbjct: 76 PVNNINLILLQNI 88 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 91,670 Number of Sequences: 438 Number of extensions: 1768 Number of successful extensions: 7 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 50 effective length of database: 124,443 effective search space used: 7839909 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 39 (20.8 bits)
- SilkBase 1999-2023 -