Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0972
(639 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-2377|AAS64833.1| 827|Drosophila melanogaster CG33455-P... 34 0.19
AY071154-1|AAL48776.1| 176|Drosophila melanogaster RE18415p pro... 33 0.43
AE014297-2125|AAF55257.1| 176|Drosophila melanogaster CG5516-PA... 33 0.43
BT029951-1|ABM92825.1| 415|Drosophila melanogaster IP17244p pro... 31 1.00
BT029920-1|ABM92794.1| 535|Drosophila melanogaster IP03029p pro... 31 1.00
AJ344344-1|CAC87637.1| 532|Drosophila melanogaster inwardly rec... 31 1.00
AE014298-2794|AAF48911.1| 668|Drosophila melanogaster CG14190-P... 31 1.00
AE014297-3286|AAF56107.1| 532|Drosophila melanogaster CG6747-PA... 31 1.00
AY044166-1|AAK98804.1| 422|Drosophila melanogaster potassium in... 31 1.3
AY058540-1|AAL13769.1| 861|Drosophila melanogaster LD24267p pro... 29 5.3
AL121806-14|CAB58099.1| 861|Drosophila melanogaster EG:33C11.2 ... 29 5.3
AE014298-169|AAF45598.1| 861|Drosophila melanogaster CG11403-PA... 29 5.3
AY069804-1|AAL39949.1| 2555|Drosophila melanogaster SD04476p pro... 29 7.0
AY061453-1|AAL29001.1| 985|Drosophila melanogaster LD39136p pro... 29 7.0
AF032870-1|AAC38820.1| 2559|Drosophila melanogaster Shar pei/DRh... 29 7.0
AE013599-2404|AAF57915.2| 2205|Drosophila melanogaster CG9635-PE... 29 7.0
AE013599-2403|AAM68490.2| 2559|Drosophila melanogaster CG9635-PF... 29 7.0
AE013599-2402|AAM68489.1| 2559|Drosophila melanogaster CG9635-PD... 29 7.0
AE013599-1040|AAF58831.2| 985|Drosophila melanogaster CG18011-P... 29 7.0
AF031930-1|AAB88816.1| 2559|Drosophila melanogaster putative gua... 28 9.3
>AE013599-2377|AAS64833.1| 827|Drosophila melanogaster CG33455-PA
protein.
Length = 827
Score = 33.9 bits (74), Expect = 0.19
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 143 EDLTSPSSDERMDTGSESFRSQDTPNSALSS-DCDEREPDTVLRLQNPQTILRFSD 307
EDL S DE E F S D PN+ S D + P T L N ++ ++FSD
Sbjct: 148 EDLHSDEEDEEYTFKEEDFHSDDDPNTTASDFDSNPCTPQTPL-TANEESPIKFSD 202
>AY071154-1|AAL48776.1| 176|Drosophila melanogaster RE18415p
protein.
Length = 176
Score = 32.7 bits (71), Expect = 0.43
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2
Query: 131 RTNEEDLTSPSSDERMDTGSESFRSQDTPNSALSSDCDERE 253
+T++ +S SS + D+ SES S ++ +S+ SSD D+ E
Sbjct: 94 KTSKSSSSSSSSSDSSDSSSESGSSSESDSSSSSSDSDDEE 134
>AE014297-2125|AAF55257.1| 176|Drosophila melanogaster CG5516-PA
protein.
Length = 176
Score = 32.7 bits (71), Expect = 0.43
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2
Query: 131 RTNEEDLTSPSSDERMDTGSESFRSQDTPNSALSSDCDERE 253
+T++ +S SS + D+ SES S ++ +S+ SSD D+ E
Sbjct: 94 KTSKSSSSSSSSSDSSDSSSESGSSSESDSSSSSSDSDDEE 134
>BT029951-1|ABM92825.1| 415|Drosophila melanogaster IP17244p
protein.
Length = 415
Score = 31.5 bits (68), Expect = 1.00
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 146 DLTSPSSDERMDTGSESFRSQDTPNSALSSDCD 244
D P+SDE +D+G RS PN L+S+ +
Sbjct: 272 DHLDPASDESLDSGRLQIRSHSIPNGVLASELE 304
>BT029920-1|ABM92794.1| 535|Drosophila melanogaster IP03029p
protein.
Length = 535
Score = 31.5 bits (68), Expect = 1.00
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 146 DLTSPSSDERMDTGSESFRSQDTPNSALSSDCD 244
D P+SDE +D+G RS PN L+S+ +
Sbjct: 392 DHLDPASDESLDSGRLQIRSHSIPNGVLASELE 424
>AJ344344-1|CAC87637.1| 532|Drosophila melanogaster inwardly
rectifying K+ channelprotein protein.
Length = 532
Score = 31.5 bits (68), Expect = 1.00
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 146 DLTSPSSDERMDTGSESFRSQDTPNSALSSDCD 244
D P+SDE +D+G RS PN L+S+ +
Sbjct: 389 DHLDPASDESLDSGRLQIRSHSIPNGVLASELE 421
>AE014298-2794|AAF48911.1| 668|Drosophila melanogaster CG14190-PA
protein.
Length = 668
Score = 31.5 bits (68), Expect = 1.00
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +2
Query: 128 IRTNEEDLTSPSSDER----MDTGSESFRSQDTPNSALSSDCDEREPDTVLRLQNPQTIL 295
I NE+++ PS +E MDT + S T N E+EP +V+ ++ P TI+
Sbjct: 190 ISQNEQNINDPSVNENPQMIMDTSTFSTNDASTTNVVYV----EQEPTSVVMVEQPNTII 245
Query: 296 RFSDH 310
D+
Sbjct: 246 ELVDY 250
>AE014297-3286|AAF56107.1| 532|Drosophila melanogaster CG6747-PA
protein.
Length = 532
Score = 31.5 bits (68), Expect = 1.00
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 146 DLTSPSSDERMDTGSESFRSQDTPNSALSSDCD 244
D P+SDE +D+G RS PN L+S+ +
Sbjct: 389 DHLDPASDESLDSGRLQIRSHSIPNGVLASELE 421
>AY044166-1|AAK98804.1| 422|Drosophila melanogaster potassium
inwardly rectifyingchannel DIR protein.
Length = 422
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 146 DLTSPSSDERMDTGSESFRSQDTPNSALSSD 238
D P+SDE +D+G RS PN L+S+
Sbjct: 389 DHLDPASDESLDSGRLQIRSHSIPNGVLASE 419
>AY058540-1|AAL13769.1| 861|Drosophila melanogaster LD24267p
protein.
Length = 861
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 266 ERCLAPARRSLRTEPS*ECPVTGKIRSLCPF 174
ERCL A + R PS + +T + S CPF
Sbjct: 244 ERCLDMATKKARPNPSKKSRLTAEANSRCPF 274
>AL121806-14|CAB58099.1| 861|Drosophila melanogaster EG:33C11.2
protein.
Length = 861
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 266 ERCLAPARRSLRTEPS*ECPVTGKIRSLCPF 174
ERCL A + R PS + +T + S CPF
Sbjct: 244 ERCLDMATKKARPNPSKKSRLTAEANSRCPF 274
>AE014298-169|AAF45598.1| 861|Drosophila melanogaster CG11403-PA
protein.
Length = 861
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 266 ERCLAPARRSLRTEPS*ECPVTGKIRSLCPF 174
ERCL A + R PS + +T + S CPF
Sbjct: 244 ERCLDMATKKARPNPSKKSRLTAEANSRCPF 274
>AY069804-1|AAL39949.1| 2555|Drosophila melanogaster SD04476p protein.
Length = 2555
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 131 RTNEEDLTSPSSDERMDTGSESFRSQDTPNSALSSDCDEREPDT 262
+T++ L+S +DE++D G + + NS+LSS P T
Sbjct: 1384 KTSDPSLSSRPNDEQLDLGLSNATYVGSSNSSLSSAGGSESPST 1427
>AY061453-1|AAL29001.1| 985|Drosophila melanogaster LD39136p
protein.
Length = 985
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -1
Query: 627 VFGEIPNCSLTYSSAAKRNVARSSSILERLRSFSS 523
++G P C LT+S+ + N + ++++ R F S
Sbjct: 394 IYGSCPECKLTFSNILQYNKHSCAHVIKKKRGFRS 428
>AF032870-1|AAC38820.1| 2559|Drosophila melanogaster Shar pei/DRhoGEF2
protein.
Length = 2559
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 131 RTNEEDLTSPSSDERMDTGSESFRSQDTPNSALSSDCDEREPDT 262
+T++ L+S +DE++D G + + NS+LSS P T
Sbjct: 1388 KTSDPSLSSRPNDEQLDLGLSNATYVGSSNSSLSSAGGSESPST 1431
>AE013599-2404|AAF57915.2| 2205|Drosophila melanogaster CG9635-PE,
isoform E protein.
Length = 2205
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 131 RTNEEDLTSPSSDERMDTGSESFRSQDTPNSALSSDCDEREPDT 262
+T++ L+S +DE++D G + + NS+LSS P T
Sbjct: 1034 KTSDPSLSSRPNDEQLDLGLSNATYVGSSNSSLSSAGGSESPST 1077
>AE013599-2403|AAM68490.2| 2559|Drosophila melanogaster CG9635-PF,
isoform F protein.
Length = 2559
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 131 RTNEEDLTSPSSDERMDTGSESFRSQDTPNSALSSDCDEREPDT 262
+T++ L+S +DE++D G + + NS+LSS P T
Sbjct: 1388 KTSDPSLSSRPNDEQLDLGLSNATYVGSSNSSLSSAGGSESPST 1431
>AE013599-2402|AAM68489.1| 2559|Drosophila melanogaster CG9635-PD,
isoform D protein.
Length = 2559
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 131 RTNEEDLTSPSSDERMDTGSESFRSQDTPNSALSSDCDEREPDT 262
+T++ L+S +DE++D G + + NS+LSS P T
Sbjct: 1388 KTSDPSLSSRPNDEQLDLGLSNATYVGSSNSSLSSAGGSESPST 1431
>AE013599-1040|AAF58831.2| 985|Drosophila melanogaster CG18011-PA
protein.
Length = 985
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -1
Query: 627 VFGEIPNCSLTYSSAAKRNVARSSSILERLRSFSS 523
++G P C LT+S+ + N + ++++ R F S
Sbjct: 394 IYGSCPECKLTFSNILQYNKHSCAHVIKKKRGFRS 428
>AF031930-1|AAB88816.1| 2559|Drosophila melanogaster putative guanine
nucleotide exchangefactor RhoGEF2 protein.
Length = 2559
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 131 RTNEEDLTSPSSDERMDTGSESFRSQDTPNSALSSDCDEREPDT 262
+T++ L+S +DE++D G + + NS+LSS P T
Sbjct: 1388 KTSDPSLSSRPNDEQLDLGLSNATYVGSSNSSLSSAGGTESPST 1431
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,650,450
Number of Sequences: 53049
Number of extensions: 552261
Number of successful extensions: 2172
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2172
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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