Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0970
         (510 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   2.8  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   3.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   4.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   6.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   6.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.4  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 355 ILVLCLDDIFVALIVTHY 408
           ILVLCL  + + L V H+
Sbjct: 5   ILVLCLATLALGLFVPHF 22


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -1

Query: 291 LDNVQTHLDPYDIDQDY*VLLSSLKYTAVLFKSVILVEQSPDR 163
           LDN Q  L P D++     +L +   +    +++ L+++S  R
Sbjct: 483 LDNQQLELKPIDLNSGDLSMLETNNLSETFTQNLSLMDESEGR 525


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 219 SMNSRVPNSLDRYHT 263
           S+N R P+ L+ +HT
Sbjct: 248 SLNFRTPSCLETFHT 262


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 146 KADPVPIASTNKITVPSWKCV 84
           K+ P P    + +TV SW+ V
Sbjct: 224 KSRPSPATIISNVTVISWQAV 244


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 146 KADPVPIASTNKITVPSWKCV 84
           K+ P P    + +TV SW+ V
Sbjct: 224 KSRPSPATIISNVTVISWQAV 244


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 146 KADPVPIASTNKITVPSWKCV 84
           K+ P P    + +TV SW+ V
Sbjct: 544 KSRPSPATIISNVTVISWQAV 564


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,651
Number of Sequences: 336
Number of extensions: 2193
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)