Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0966
         (812 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    29   0.13 
AF457557-1|AAL68787.1|   90|Anopheles gambiae hypothetical prote...    24   6.4  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   8.5  

>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 29.5 bits (63), Expect = 0.13
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +1

Query: 31  GKDGSVDKECPWKYDSGNLAQCYPQYSCKCQDAKNNTYACIRHI 162
           GK  +  KEC  +  +G    C    SCK  + K+N ++ ++H+
Sbjct: 93  GKSSTKGKECRTR--AGEKGHCTRYQSCKGPELKDNVWSVLQHL 134


>AF457557-1|AAL68787.1|   90|Anopheles gambiae hypothetical protein
           10 protein.
          Length = 90

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 393 LNFLSITTIPELMWV-VVKFVNYED 464
           + FLS+ T+  L+WV V   VN ED
Sbjct: 1   MRFLSVLTVGLLVWVGVFATVNAED 25


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +1

Query: 19   YYGEGKDGSVDKECPWKYDSGNLAQCYPQYSCKCQD 126
            YYG  +DG    +C      G  +QC     C C D
Sbjct: 976  YYGFSEDGCHACDCDPSGSKG--SQCNQYGQCPCND 1009


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,051
Number of Sequences: 2352
Number of extensions: 15500
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)