Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0966
(812 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 38 0.006
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 31 0.98
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 30 2.3
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 30 2.3
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 29 3.0
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe... 29 4.0
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe... 29 4.0
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty... 29 4.0
AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protei... 29 5.2
AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A prot... 29 5.2
AC024753-6|AAF60458.2| 407|Caenorhabditis elegans Hypothetical ... 28 6.9
Z68337-9|CAA92751.2| 334|Caenorhabditis elegans Hypothetical pr... 28 9.1
AC006742-6|AAF60498.1| 778|Caenorhabditis elegans Hypothetical ... 28 9.1
AC006742-3|AAF60501.1| 778|Caenorhabditis elegans Hypothetical ... 28 9.1
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/72 (33%), Positives = 31/72 (43%)
Frame = +1
Query: 112 CKCQDAKNNTYACIRHIAERIDKKYCLFADNENFSEMYNIADDPYELENIVNHVFPAVKY 291
C CQ+ NNTY C+R E + YC F F Y+ DP +L N V + V
Sbjct: 603 CFCQNCNNNTYWCLRTKNETHNFLYCEFV--TEFISFYDFNTDPDQLINAVYSLDIGVLE 660
Query: 292 WYREILTRMLTC 327
E L + C
Sbjct: 661 QLSEQLRNLRKC 672
Score = 30.7 bits (66), Expect = 1.3
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 15/124 (12%)
Frame = +1
Query: 34 KDGSVDKECP---WKYDS--GNLAQCYPQYS-----CKCQDAKNNTYACI--RHIAERID 177
K+ + KEC W+ D G L +CY KC+D ++ +C R I+ D
Sbjct: 427 KENRLSKECKRRKWQRDCVHGQLWKCYYTVEDRWRIYKCRDNWSDQCSCRKKREISNYDD 486
Query: 178 K---KYCLFADNENFSEMYNIADDPYELENIVNHVFPAVKYWYREILTRMLTCSGAHNCD 348
++ +AD ENFSE + +E V + R IL++ CS + N
Sbjct: 487 DDIDEFLTYADRENFSEGHEWYQGEFEDSGEVGEELDGHRS-KRGILSK---CSCSRNVS 542
Query: 349 HPLE 360
HP++
Sbjct: 543 HPIK 546
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 31.1 bits (67), Expect = 0.98
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 110 VASVKTPKTIHTPVSDTSRSESTRNIASSLTMRTSVK 220
+A+VKTPKT TP + RS+S N + T S++
Sbjct: 332 IAAVKTPKTPTTPKTSKGRSKSPANTTAYFTADESLE 368
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 31.1 bits (67), Expect = 0.98
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 110 VASVKTPKTIHTPVSDTSRSESTRNIASSLTMRTSVK 220
+A+VKTPKT TP + RS+S N + T S++
Sbjct: 332 IAAVKTPKTPTTPKTSKGRSKSPANTTAYFTADESLE 368
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
Frame = +1
Query: 58 CPWKYDSGNLAQCYPQYSC--------KCQDAKNN-TYACIRHIAERIDKKYCLFADNEN 210
CP+ N +C P+ C +C+D K+ T +C +DK+ C ADN
Sbjct: 1423 CPFGEQLVNKTKCEPENECLDSSSCSQRCKDEKHGFTCSCDEGYELDVDKRTCKVADNVK 1482
Query: 211 FSEMY 225
+ +Y
Sbjct: 1483 DTRIY 1487
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
Frame = +1
Query: 58 CPWKYDSGNLAQCYPQYSC--------KCQDAKNN-TYACIRHIAERIDKKYCLFADNEN 210
CP+ N +C P+ C +C+D K+ T +C +DK+ C ADN
Sbjct: 1423 CPFGEQLVNKTKCEPENECLDSSSCSQRCKDEKHGFTCSCDEGYELDVDKRTCKVADNVK 1482
Query: 211 FSEMY 225
+ +Y
Sbjct: 1483 DTRIY 1487
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 298 CTSTSPPETRDSQCSPIRKDRLLCCTFH*SSHCQRRGNISCRFAP 164
C +T+P +T S P+++ L T + CQ+ I C AP
Sbjct: 56 CQNTAPVQTSCSCAQPVQQQTYLVPTSQCAPACQQSCQIHCHSAP 100
>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying
defective protein 19,isoform a protein.
Length = 1783
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 459 EDAIV*RPQKRKPVKMTNFITK*IKQFIKLT*NITISKIHHSIWQLK 599
+DA RP +RKP++ TN + + + + L+ N I K+ SI + K
Sbjct: 42 QDATKKRPAQRKPLRQTNVVERSERSLLCLSLNNPIRKLCISIVEWK 88
>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying
defective protein 19,isoform b protein.
Length = 1877
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 459 EDAIV*RPQKRKPVKMTNFITK*IKQFIKLT*NITISKIHHSIWQLK 599
+DA RP +RKP++ TN + + + + L+ N I K+ SI + K
Sbjct: 42 QDATKKRPAQRKPLRQTNVVERSERSLLCLSLNNPIRKLCISIVEWK 88
>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
calcium channelalpha 1 subunit protein.
Length = 1783
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 459 EDAIV*RPQKRKPVKMTNFITK*IKQFIKLT*NITISKIHHSIWQLK 599
+DA RP +RKP++ TN + + + + L+ N I K+ SI + K
Sbjct: 42 QDATKKRPAQRKPLRQTNVVERSERSLLCLSLNNPIRKLCISIVEWK 88
>AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protein 1
protein.
Length = 1908
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -2
Query: 160 CV*YRRMYCFWRLDTCNCT-EDSIERDYRYHTSKDILYPQIRPCLR-RSIQ 14
C+ R YC W + +CT E+S ER+ HTS+ L Q C R RS++
Sbjct: 507 CLSSRDPYCGWCVSNNHCTQEESCEREVP-HTSRGWLDFQNSKCPRIRSVK 556
>AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A
protein.
Length = 1951
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -2
Query: 160 CV*YRRMYCFWRLDTCNCT-EDSIERDYRYHTSKDILYPQIRPCLR-RSIQ 14
C+ R YC W + +CT E+S ER+ HTS+ L Q C R RS++
Sbjct: 513 CLSSRDPYCGWCVSNNHCTQEESCEREVP-HTSRGWLDFQNSKCPRIRSVK 562
>AC024753-6|AAF60458.2| 407|Caenorhabditis elegans Hypothetical
protein Y23H5B.4 protein.
Length = 407
Score = 28.3 bits (60), Expect = 6.9
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -1
Query: 515 KICHFYWFSFLWSLHNGIFIINKFYYYPH*LW 420
++CH ++FSF W+++ + I + + LW
Sbjct: 90 ELCHPWYFSFPWAIYTKFYAIFSVFVHSCSLW 121
>Z68337-9|CAA92751.2| 334|Caenorhabditis elegans Hypothetical
protein M7.13 protein.
Length = 334
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 509 KFYYKINKTVHKINLKYNNIKNTSQY 586
K YYKIN+ +K++L+ +N+++ Y
Sbjct: 230 KTYYKINELTNKVSLRTSNLQSQLLY 255
>AC006742-6|AAF60498.1| 778|Caenorhabditis elegans Hypothetical
protein Y38C1AB.2 protein.
Length = 778
Score = 27.9 bits (59), Expect = 9.1
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Frame = -3
Query: 255 LQFVRIVCYVVHFTEVLIVSEE---AIFLVDSLRDVSDTG---VCIVFGVL--TLATVLR 100
L F R+ + T VL V++E +FLV S +DVS G V I+ +L L T+
Sbjct: 338 LAFSRVALVIT--TLVLEVAQEFVFPVFLVKSSKDVSYKGWPIVPIILEILYCVLFTIAT 395
Query: 99 IALSEITAIILPRTFFIH------RSVLAFAVVF 16
++ + FFIH ++VL F V+F
Sbjct: 396 VSTLRFFEFMKSLGFFIHILKKMIKTVLMFVVIF 429
>AC006742-3|AAF60501.1| 778|Caenorhabditis elegans Hypothetical
protein Y38C1AB.6 protein.
Length = 778
Score = 27.9 bits (59), Expect = 9.1
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Frame = -3
Query: 255 LQFVRIVCYVVHFTEVLIVSEE---AIFLVDSLRDVSDTG---VCIVFGVL--TLATVLR 100
L F R+ + T VL V++E +FLV S +DVS G V I+ +L L T+
Sbjct: 338 LAFSRVALVIT--TLVLEVAQEFVFPVFLVKSSKDVSYKGWPIVPIILEILYCVLFTIAT 395
Query: 99 IALSEITAIILPRTFFIH------RSVLAFAVVF 16
++ + FFIH ++VL F V+F
Sbjct: 396 VSTLRFFEFMKSLGFFIHILKKMIKTVLMFVVIF 429
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,291,875
Number of Sequences: 27780
Number of extensions: 370110
Number of successful extensions: 1108
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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