BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0965 (629 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P50239 Cluster: Ecdysone-inducible protein E75; n=17; E... 146 3e-34 UniRef50_Q0JRL0 Cluster: Ecdysone-induced protein 75C; n=8; Coel... 136 5e-31 UniRef50_P13055 Cluster: Ecdysone-induced protein 75B isoform B;... 134 1e-30 UniRef50_Q3I5Q8 Cluster: E75 nuclear receptor; n=1; Gecarcinus l... 119 5e-26 UniRef50_O77245 Cluster: Nuclear hormone receptor E75; n=9; Coel... 118 1e-25 UniRef50_Q9XUK7 Cluster: Nuclear hormone receptor family member ... 79 9e-14 UniRef50_Q4RW38 Cluster: Chromosome 9 SCAF14991, whole genome sh... 78 2e-13 UniRef50_P20393 Cluster: Orphan nuclear receptor NR1D1; n=25; Th... 77 3e-13 UniRef50_Q6TNS3 Cluster: Nuclear receptor subfamily 1, group D, ... 76 6e-13 UniRef50_Q4RXZ3 Cluster: Chromosome 11 SCAF14979, whole genome s... 76 6e-13 UniRef50_UPI0000F1EFB0 Cluster: PREDICTED: similar to Rev-Erb be... 73 4e-12 UniRef50_Q90Z65 Cluster: Rev-Erb beta 1; n=5; Euteleostomi|Rep: ... 73 4e-12 UniRef50_Q1L684 Cluster: Rev-erbgamma-A; n=7; Clupeocephala|Rep:... 73 4e-12 UniRef50_Q14995 Cluster: Orphan nuclear receptor NR1D2; n=48; Eu... 73 4e-12 UniRef50_Q90Z63 Cluster: Rev-Erb beta; n=3; Euteleostei|Rep: Rev... 72 1e-11 UniRef50_UPI00004D0DA7 Cluster: Orphan nuclear receptor NR1D2 (R... 68 2e-10 UniRef50_A7LC92 Cluster: Nuclear receptor; n=2; Onchocercidae|Re... 68 2e-10 UniRef50_UPI0000588E36 Cluster: PREDICTED: similar to peroxisome... 66 7e-10 UniRef50_Q4H2X6 Cluster: Nuclear receptor; n=3; Ciona intestinal... 64 2e-09 UniRef50_UPI0000D55BCD Cluster: PREDICTED: similar to CG18023-PA... 64 3e-09 UniRef50_P45447 Cluster: Ecdysone-induced protein 78C; n=5; Dipt... 64 3e-09 UniRef50_A7MAD3 Cluster: Ecdysone-induced protein 78C; n=3; Endo... 63 5e-09 UniRef50_Q4H2V7 Cluster: Nuclear receptor; n=1; Ciona intestinal... 63 6e-09 UniRef50_P51449 Cluster: Nuclear receptor ROR-gamma; n=34; Amnio... 63 6e-09 UniRef50_P35398 Cluster: Nuclear receptor ROR-alpha; n=84; Eutel... 62 8e-09 UniRef50_Q2LYQ2 Cluster: GA14768-PA; n=1; Drosophila pseudoobscu... 62 1e-08 UniRef50_P41828 Cluster: Nuclear hormone receptor family member ... 62 1e-08 UniRef50_Q4RV24 Cluster: Chromosome 15 SCAF14992, whole genome s... 62 1e-08 UniRef50_A1DYE6 Cluster: Nuclear receptor-like protein; n=1; Tri... 62 1e-08 UniRef50_P37231 Cluster: Peroxisome proliferator-activated recep... 62 1e-08 UniRef50_UPI0000F21513 Cluster: PREDICTED: hypothetical protein;... 61 2e-08 UniRef50_Q1L678 Cluster: RORgamma-B; n=13; Euteleostomi|Rep: ROR... 61 2e-08 UniRef50_UPI0000F2CB6C Cluster: PREDICTED: similar to beta-1,4-N... 61 2e-08 UniRef50_P31396 Cluster: Probable nuclear hormone receptor HR3; ... 61 2e-08 UniRef50_UPI0000584695 Cluster: PREDICTED: similar to ecdysone-i... 60 3e-08 UniRef50_Q90Z66 Cluster: Peroxisome proliferator-activated recep... 60 3e-08 UniRef50_Q0KFU8 Cluster: HR3 isoform B1; n=3; Blattella germanic... 60 3e-08 UniRef50_Q967S3 Cluster: Nuclear receptor nhr-7A; n=4; Onchocerc... 60 4e-08 UniRef50_UPI0000E481C8 Cluster: PREDICTED: similar to nuclear ho... 59 8e-08 UniRef50_Q9BWQ7 Cluster: Peroxisome proliferator-activated recep... 59 8e-08 UniRef50_Q07869 Cluster: Peroxisome proliferator-activated recep... 59 8e-08 UniRef50_UPI0000EB467C Cluster: UPI0000EB467C related cluster; n... 58 1e-07 UniRef50_Q90Y02 Cluster: Peroxisome proliferator-activated recep... 58 1e-07 UniRef50_Q4RVW1 Cluster: Chromosome 9 SCAF14991, whole genome sh... 58 1e-07 UniRef50_Q4H2V2 Cluster: Nuclear receptor; n=2; Ciona intestinal... 58 1e-07 UniRef50_O02643 Cluster: Hormone receptor 3C; n=1; Choristoneura... 58 2e-07 UniRef50_Q2TUU3 Cluster: Ecdysone-induced protein E78; n=3; Schi... 58 2e-07 UniRef50_Q4SHA3 Cluster: Chromosome 19 SCAF14584, whole genome s... 57 4e-07 UniRef50_UPI0000E494CA Cluster: PREDICTED: similar to peroxisome... 54 4e-06 UniRef50_Q4SGI2 Cluster: Chromosome undetermined SCAF14594, whol... 53 7e-06 UniRef50_UPI0000586F42 Cluster: PREDICTED: similar to GA17350-PA... 52 9e-06 UniRef50_UPI00005864C9 Cluster: PREDICTED: similar to E75 nuclea... 52 9e-06 UniRef50_Q66MI8 Cluster: COUP-TF1 nuclear orphan receptor; n=2; ... 52 1e-05 UniRef50_UPI0000E4819E Cluster: PREDICTED: similar to Nr1h3 prot... 51 2e-05 UniRef50_Q1W404 Cluster: RAR-like nuclear receptor; n=5; Schisto... 51 2e-05 UniRef50_P13631 Cluster: Retinoic acid receptor gamma-1; n=5; Co... 51 2e-05 UniRef50_Q4REU2 Cluster: Chromosome 13 SCAF15122, whole genome s... 50 3e-05 UniRef50_P10589 Cluster: COUP transcription factor 1; n=130; Eum... 49 8e-05 UniRef50_P16376 Cluster: Steroid receptor seven-up, isoform A; n... 49 8e-05 UniRef50_Q611B9 Cluster: Putative uncharacterized protein CBG171... 49 1e-04 UniRef50_A7S1X4 Cluster: Predicted protein; n=1; Nematostella ve... 49 1e-04 UniRef50_P10276 Cluster: Retinoic acid receptor alpha; n=207; Eu... 49 1e-04 UniRef50_UPI0000F2CA65 Cluster: PREDICTED: similar to DNA (cytos... 48 2e-04 UniRef50_Q26641 Cluster: COUP transcription factor; n=2; Strongy... 48 2e-04 UniRef50_UPI0000EB22C7 Cluster: UPI0000EB22C7 related cluster; n... 47 3e-04 UniRef50_Q173C6 Cluster: Expressed protein; n=1; Aedes aegypti|R... 47 3e-04 UniRef50_Q8I748 Cluster: Retinoid X receptor; n=1; Suberites dom... 47 4e-04 UniRef50_Q52ZN9 Cluster: Nuclear receptor usp/RXR; n=2; Coelomat... 46 6e-04 UniRef50_A1ZA01 Cluster: CG16801-PB, isoform B; n=5; Endopterygo... 46 6e-04 UniRef50_Q4H2W2 Cluster: Nuclear receptor; n=4; Ascidiacea|Rep: ... 46 7e-04 UniRef50_Q4H2U9 Cluster: Nuclear receptor; n=9; Coelomata|Rep: N... 46 7e-04 UniRef50_Q9Y5X4 Cluster: Photoreceptor-specific nuclear receptor... 46 7e-04 UniRef50_Q24142 Cluster: Nuclear hormone receptor HR78; n=4; Sop... 46 7e-04 UniRef50_UPI0000D8B087 Cluster: UPI0000D8B087 related cluster; n... 46 0.001 UniRef50_P13056 Cluster: Orphan nuclear receptor TR2; n=78; Eute... 46 0.001 UniRef50_UPI000065F8EB Cluster: Homolog of Gallus gallus "Nuclea... 45 0.001 UniRef50_O77230 Cluster: Nuclear hormone receptor; n=1; Brugia p... 45 0.002 UniRef50_UPI0000DB6D60 Cluster: PREDICTED: similar to Orphan nuc... 44 0.002 UniRef50_UPI00006A05FD Cluster: Orphan nuclear receptor TR4 (Orp... 44 0.002 UniRef50_Q7Q2K7 Cluster: ENSANGP00000003675; n=1; Anopheles gamb... 44 0.002 UniRef50_A7TAF5 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.002 UniRef50_A7MAD8 Cluster: Hormone receptor-like in 4; n=3; Aedes ... 44 0.002 UniRef50_O76202 Cluster: Protein ultraspiracle homolog; n=5; Dit... 44 0.002 UniRef50_Q9W539 Cluster: Hormone receptor 4; n=2; Pancrustacea|R... 44 0.002 UniRef50_Q95WG3 Cluster: Nuclear receptor AmNR2; n=2; Hexacorall... 44 0.003 UniRef50_Q4KXQ1 Cluster: TR4/TR2; n=11; Eumetazoa|Rep: TR4/TR2 -... 44 0.003 UniRef50_Q17K29 Cluster: Nuclear hormone receptor; n=2; Culicida... 44 0.003 UniRef50_O61227 Cluster: Nuclear receptor; n=1; Tenebrio molitor... 44 0.003 UniRef50_A7S286 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.003 UniRef50_UPI0000E479AD Cluster: PREDICTED: similar to MGC79469 p... 44 0.004 UniRef50_Q703I8 Cluster: Zinc finger transcription factor; n=2; ... 44 0.004 UniRef50_P90892 Cluster: Defective fasciculation of axons protei... 44 0.004 UniRef50_P18102 Cluster: Protein tailless; n=10; Diptera|Rep: Pr... 44 0.004 UniRef50_Q15406 Cluster: Orphan nuclear receptor NR6A1; n=53; Eu... 44 0.004 UniRef50_Q90WV5 Cluster: Photoreceptor-specific nuclear receptor... 43 0.005 UniRef50_A5HL80 Cluster: Retinoid X receptor alpha 2; n=2; Clupe... 43 0.005 UniRef50_Q16IX1 Cluster: Putative uncharacterized protein; n=1; ... 43 0.005 UniRef50_UPI000051A33D Cluster: PREDICTED: similar to photorecep... 43 0.007 UniRef50_UPI000065FDEF Cluster: Homolog of Gallus gallus "Nuclea... 43 0.007 UniRef50_Q95WG1 Cluster: Nuclear receptor AmNR4 isoform A; n=3; ... 43 0.007 UniRef50_Q617F2 Cluster: Putative uncharacterized protein CBG149... 43 0.007 UniRef50_Q4H3F3 Cluster: Nuclear receptor; n=1; Ciona intestinal... 43 0.007 UniRef50_P28702 Cluster: Retinoic acid receptor RXR-beta; n=240;... 43 0.007 UniRef50_Q9XVV3 Cluster: Nuclear hormone receptor family member ... 43 0.007 UniRef50_P41830 Cluster: Steroid hormone receptor family member ... 43 0.007 UniRef50_UPI0000DB6EB1 Cluster: PREDICTED: similar to Nuclear Ho... 42 0.009 UniRef50_Q9NCL0 Cluster: Tailless ortholog; n=3; Coelomata|Rep: ... 42 0.009 UniRef50_Q95WF8 Cluster: Nuclear receptor AmNR6; n=2; Astrocoeni... 42 0.009 UniRef50_Q8WSJ4 Cluster: Hormone receptor 4; n=3; Obtectomera|Re... 42 0.009 UniRef50_Q26622 Cluster: Orphan steroid hormone receptor 2; n=7;... 42 0.009 UniRef50_P13054 Cluster: Knirps-related protein; n=2; Sophophora... 42 0.009 UniRef50_UPI00015B573C Cluster: PREDICTED: similar to thr4; n=1;... 42 0.012 UniRef50_UPI0000588887 Cluster: PREDICTED: similar to GA10225-PA... 42 0.012 UniRef50_Q4T0V6 Cluster: Chromosome undetermined SCAF10841, whol... 42 0.012 UniRef50_Q4RXK2 Cluster: Chromosome 11 SCAF14979, whole genome s... 42 0.012 UniRef50_Q4U1Y2 Cluster: Steroid hormone receptor 3; n=1; Strong... 42 0.012 UniRef50_Q0IGD6 Cluster: Tailless; n=1; Aedes aegypti|Rep: Taill... 42 0.012 UniRef50_A7S012 Cluster: Predicted protein; n=1; Nematostella ve... 42 0.012 UniRef50_P49116 Cluster: Orphan nuclear receptor TR4; n=13; Eume... 42 0.012 UniRef50_P43354 Cluster: Orphan nuclear receptor NR4A2; n=77; Eu... 42 0.012 UniRef50_Q10902 Cluster: Nuclear hormone receptor family member ... 42 0.012 UniRef50_UPI00015B4A62 Cluster: PREDICTED: similar to nuclear re... 42 0.016 UniRef50_UPI0000DB771B Cluster: PREDICTED: similar to Hormone re... 42 0.016 UniRef50_Q98ST8 Cluster: Ff1c; n=6; Clupeocephala|Rep: Ff1c - Da... 42 0.016 UniRef50_Q7ZZY9 Cluster: Vitamin D receptor; n=1; Petromyzon mar... 42 0.016 UniRef50_Q4SD43 Cluster: Chromosome 1 SCAF14643, whole genome sh... 42 0.016 UniRef50_Q49MA6 Cluster: Nuclear receptor 2DBD-gamma; n=3; Bilat... 42 0.016 UniRef50_Q1RPY8 Cluster: Nuclear receptor; n=2; Ciona intestinal... 42 0.016 UniRef50_Q92570 Cluster: Orphan nuclear receptor NR4A3; n=26; Eu... 42 0.016 UniRef50_Q9Y466 Cluster: Orphan nuclear receptor NR2E1; n=38; Eu... 42 0.016 UniRef50_P15370 Cluster: Protein embryonic gonad; n=2; Sophophor... 42 0.016 UniRef50_UPI0000E47369 Cluster: PREDICTED: similar to ROR-alpha ... 37 0.018 UniRef50_Q7PUT9 Cluster: ENSANGP00000017626; n=12; Endopterygota... 41 0.021 UniRef50_A0NCV2 Cluster: ENSANGP00000031834; n=2; Culicidae|Rep:... 41 0.021 UniRef50_P10827 Cluster: Thyroid hormone receptor alpha; n=186; ... 41 0.021 UniRef50_Q9N4B8 Cluster: Nuclear hormone receptor family member ... 41 0.021 UniRef50_UPI0000F1FFCD Cluster: PREDICTED: neural orphan nuclear... 41 0.028 UniRef50_UPI0000D55997 Cluster: PREDICTED: similar to Knirps-rel... 41 0.028 UniRef50_UPI0000D556F1 Cluster: PREDICTED: similar to CG9019-PA;... 41 0.028 UniRef50_UPI0000584A1E Cluster: PREDICTED: similar to nuclear re... 41 0.028 UniRef50_UPI000051A1CD Cluster: PREDICTED: similar to Knirps-rel... 41 0.028 UniRef50_Q4RI46 Cluster: Chromosome 8 SCAF15044, whole genome sh... 41 0.028 UniRef50_Q2M0D5 Cluster: GA17924-PA; n=1; Drosophila pseudoobscu... 41 0.028 UniRef50_O96562 Cluster: Retinoic acid X receptor; n=1; Tripedal... 41 0.028 UniRef50_Q20765 Cluster: Nuclear hormone receptor family member ... 41 0.028 UniRef50_O45666 Cluster: Nuclear hormone receptor family member ... 41 0.028 UniRef50_P33244 Cluster: Nuclear hormone receptor FTZ-F1; n=4; C... 41 0.028 UniRef50_UPI0000E4A84F Cluster: PREDICTED: similar to retinoic X... 40 0.037 UniRef50_Q90Y24 Cluster: Thyroid hormone receptor alpha small is... 40 0.037 UniRef50_Q4RI90 Cluster: Chromosome 8 SCAF15044, whole genome sh... 40 0.037 UniRef50_Q9NB03 Cluster: Nuclear receptor FTZ-F1 protein; n=2; A... 40 0.037 UniRef50_Q4H333 Cluster: Nuclear receptor; n=2; Coelomata|Rep: N... 40 0.037 UniRef50_Q3I5Q0 Cluster: RXRc nuclear hormone receptor; n=4; Dec... 40 0.037 UniRef50_UPI0000E460D2 Cluster: PREDICTED: similar to orphan nuc... 40 0.049 UniRef50_UPI0000DB6F53 Cluster: PREDICTED: similar to nuclear re... 40 0.049 UniRef50_Q9Y1J4 Cluster: Retinoid X receptor RXR-2; n=10; Bilate... 40 0.049 UniRef50_Q9Y0D1 Cluster: Fushi tarazu-factor 1; n=4; Pancrustace... 40 0.049 UniRef50_Q8ST32 Cluster: Nuclear receptor RXR; n=1; Dirofilaria ... 40 0.049 UniRef50_Q2TUU9 Cluster: Two-DBD-nuclear receptor; n=3; Schistos... 40 0.049 UniRef50_Q4SGI3 Cluster: Chromosome undetermined SCAF14594, whol... 40 0.065 UniRef50_A7RX15 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.065 UniRef50_P20153 Cluster: Protein ultraspiracle; n=6; Schizophora... 40 0.065 UniRef50_Q9U2R6 Cluster: Nuclear hormone receptor family member ... 40 0.065 UniRef50_P41829 Cluster: Nuclear hormone receptor family member ... 40 0.065 UniRef50_UPI0000587672 Cluster: PREDICTED: similar to tailless; ... 39 0.086 UniRef50_Q49MV3 Cluster: Nuclear receptor 2DBD-beta; n=2; Schist... 39 0.086 UniRef50_P49869 Cluster: Probable nuclear hormone receptor HR38;... 39 0.086 UniRef50_O42554 Cluster: ReverbB; n=2; Danio rerio|Rep: ReverbB ... 39 0.11 UniRef50_O45117 Cluster: Ultraspiracle; n=3; Endopterygota|Rep: ... 39 0.11 UniRef50_Q8T7Y2 Cluster: Nuclear orphan receptor; n=1; Bombyx mo... 38 0.15 UniRef50_O77154 Cluster: Nuclear receptor 1; n=2; Ciona intestin... 38 0.15 UniRef50_A7J001 Cluster: Rxr1; n=1; Oikopleura dioica|Rep: Rxr1 ... 38 0.15 UniRef50_O17611 Cluster: Nuclear hormone receptor family member ... 38 0.15 UniRef50_P10734 Cluster: Zygotic gap protein knirps; n=10; Schiz... 38 0.15 UniRef50_P49867 Cluster: Nuclear hormone receptor FTZ-F1; n=4; E... 38 0.15 UniRef50_UPI00015B6336 Cluster: PREDICTED: similar to zinc finge... 38 0.20 UniRef50_UPI0000F21183 Cluster: PREDICTED: similar to Hnf4a prot... 38 0.20 UniRef50_UPI0000DB74D6 Cluster: PREDICTED: similar to nuclear re... 38 0.20 UniRef50_UPI0000DB7437 Cluster: PREDICTED: similar to Knirps-rel... 38 0.20 UniRef50_UPI0000DB7436 Cluster: PREDICTED: similar to Knirps-rel... 38 0.20 UniRef50_Q5RZV7 Cluster: Thyroid hormone receptor beta; n=7; Eut... 38 0.20 UniRef50_Q8MXH2 Cluster: Nuclear hormone receptor family protein... 38 0.20 UniRef50_Q91766 Cluster: Hepatocyte nuclear factor 4-alpha; n=5;... 38 0.20 UniRef50_P49698 Cluster: Hepatocyte nuclear factor 4-alpha; n=41... 38 0.20 UniRef50_P41235 Cluster: Hepatocyte nuclear factor 4-alpha; n=63... 38 0.20 UniRef50_Q2TUT9 Cluster: Nuclear hormone receptor 4A4-like prote... 38 0.26 UniRef50_O61228 Cluster: Thr4 protein; n=2; Tenebrionidae|Rep: T... 38 0.26 UniRef50_O16890 Cluster: Nuclear hormone receptor family protein... 38 0.26 UniRef50_O00482 Cluster: Orphan nuclear receptor NR5A2; n=68; De... 38 0.26 UniRef50_Q4RQL5 Cluster: Chromosome 2 SCAF15004, whole genome sh... 37 0.35 UniRef50_Q9GUI3 Cluster: Nuclear hormone receptor family protein... 37 0.35 UniRef50_Q23038 Cluster: Putative uncharacterized protein; n=1; ... 37 0.35 UniRef50_A7L5U9 Cluster: Thyroid hormone receptor; n=2; Branchio... 37 0.35 UniRef50_Q17771 Cluster: Nuclear hormone receptor family member ... 37 0.35 UniRef50_UPI0000E4834A Cluster: PREDICTED: similar to hormone re... 37 0.46 UniRef50_Q7QCB4 Cluster: ENSANGP00000002992; n=1; Anopheles gamb... 37 0.46 UniRef50_A7SBF2 Cluster: Predicted protein; n=1; Nematostella ve... 37 0.46 UniRef50_P79926 Cluster: Hepatocyte nuclear factor 4-beta; n=7; ... 37 0.46 UniRef50_UPI000155BF1B Cluster: PREDICTED: similar to hepatocyte... 36 0.61 UniRef50_UPI00015A41AD Cluster: UPI00015A41AD related cluster; n... 36 0.61 UniRef50_Q966H7 Cluster: Putative uncharacterized protein; n=3; ... 36 0.61 UniRef50_Q29PL1 Cluster: GA21482-PA; n=1; Drosophila pseudoobscu... 36 0.61 UniRef50_Q17589 Cluster: Putative uncharacterized protein nhr-17... 36 0.61 UniRef50_O96680 Cluster: Dissatisfaction; n=2; Drosophila melano... 36 0.61 UniRef50_O45910 Cluster: Putative uncharacterized protein nhr-23... 36 0.61 UniRef50_O16884 Cluster: Putative uncharacterized protein; n=1; ... 36 0.61 UniRef50_A7MAD6 Cluster: PNR-like; n=2; Aedes aegypti|Rep: PNR-l... 36 0.61 UniRef50_Q9BJK5 Cluster: Nuclear hormone receptor family member ... 36 0.61 UniRef50_Q17370 Cluster: Nuclear hormone receptor family member ... 36 0.61 UniRef50_UPI00015B458D Cluster: PREDICTED: similar to GA10225-PA... 36 0.80 UniRef50_A5WYG8 Cluster: Pregnane X receptor; n=5; Danio rerio|R... 36 0.80 UniRef50_Q95XH8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.80 UniRef50_Q7PQN6 Cluster: ENSANGP00000012911; n=2; Culicidae|Rep:... 36 0.80 UniRef50_Q61KE7 Cluster: Putative uncharacterized protein CBG093... 36 0.80 UniRef50_Q06AL0 Cluster: Estrogen receptor-related receptor; n=1... 36 0.80 UniRef50_A5Z0M1 Cluster: UNC-55a isoform; n=8; Caenorhabditis|Re... 36 0.80 UniRef50_O18141 Cluster: Nuclear hormone receptor family member ... 36 0.80 UniRef50_Q25604 Cluster: Nuclear hormone receptor-like 1; n=1; O... 36 0.80 UniRef50_UPI000155C258 Cluster: PREDICTED: similar to photorecep... 36 1.1 UniRef50_UPI00015A74A9 Cluster: nuclear receptor subfamily 2, gr... 36 1.1 UniRef50_Q617F3 Cluster: Putative uncharacterized protein CBG149... 36 1.1 UniRef50_Q4H3L1 Cluster: Nuclear receptor; n=1; Ciona intestinal... 36 1.1 UniRef50_Q2TUU6 Cluster: Thyroid hormone receptor beta; n=2; Sch... 36 1.1 UniRef50_Q18392 Cluster: Putative uncharacterized protein C33G8.... 36 1.1 UniRef50_Q14EL7 Cluster: FTZ-F1-alpha; n=10; Eumetazoa|Rep: FTZ-... 36 1.1 UniRef50_A5JPH1 Cluster: Estrogen receptor; n=1; Branchiostoma f... 36 1.1 UniRef50_A1ZA02 Cluster: CG16801-PA, isoform A; n=1; Drosophila ... 36 1.1 UniRef50_O02235 Cluster: Nuclear hormone receptor family member ... 36 1.1 UniRef50_UPI00015B595D Cluster: PREDICTED: similar to CG16801-PA... 35 1.4 UniRef50_UPI0000DC039A Cluster: Steroidogenic factor 1 (STF-1) (... 35 1.4 UniRef50_Q9GTC9 Cluster: Nuclear receptor NHR-88; n=3; Caenorhab... 35 1.4 UniRef50_Q7QKA0 Cluster: ENSANGP00000013419; n=3; Culicidae|Rep:... 35 1.4 UniRef50_Q61XA5 Cluster: Putative uncharacterized protein CBG040... 35 1.4 UniRef50_Q61AX8 Cluster: Putative uncharacterized protein CBG135... 35 1.4 UniRef50_Q4H3G7 Cluster: Nuclear receptor; n=1; Ciona intestinal... 35 1.4 UniRef50_Q1RLF6 Cluster: Nuclear receptor; n=2; Ciona intestinal... 35 1.4 UniRef50_A7SVT5 Cluster: Predicted protein; n=2; Actiniaria|Rep:... 35 1.4 UniRef50_A7SD88 Cluster: Predicted protein; n=4; Eumetazoa|Rep: ... 35 1.4 UniRef50_P18119 Cluster: Thyroid hormone receptor beta-B; n=19; ... 35 1.4 UniRef50_Q13285 Cluster: Steroidogenic factor 1; n=59; Euteleost... 35 1.4 UniRef50_O02151 Cluster: Nuclear hormone receptor family member ... 35 1.4 UniRef50_P41999 Cluster: Nuclear hormone receptor family member ... 35 1.4 UniRef50_Q6Q6F3 Cluster: Estrogen-related receptor delta; n=3; D... 35 1.9 UniRef50_O42550 Cluster: PPARG; n=12; Clupeocephala|Rep: PPARG -... 35 1.9 UniRef50_Q9VI12 Cluster: CG10296-PA; n=2; Sophophora|Rep: CG1029... 35 1.9 UniRef50_Q9GTG3 Cluster: Nuclear receptor NHR-50; n=2; Caenorhab... 35 1.9 UniRef50_Q95YJ6 Cluster: Nuclear receptor 1; n=1; Ciona savignyi... 35 1.9 UniRef50_Q61R49 Cluster: Putative uncharacterized protein CBG067... 35 1.9 UniRef50_Q21700 Cluster: Putative uncharacterized protein nhr-20... 35 1.9 UniRef50_Q1RL97 Cluster: Nuclear receptor; n=2; Ciona intestinal... 35 1.9 UniRef50_A7S8Y8 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.9 UniRef50_A7LPI6 Cluster: Putative uncharacterized protein; n=2; ... 35 1.9 UniRef50_Q94407 Cluster: Nuclear hormone receptor family member ... 35 1.9 UniRef50_Q9XTJ4 Cluster: Nuclear hormone receptor family member ... 35 1.9 UniRef50_Q800U8 Cluster: Ff1d; n=5; Clupeocephala|Rep: Ff1d - Da... 34 2.4 UniRef50_O73631 Cluster: TFZR1; n=3; Euteleostei|Rep: TFZR1 - On... 34 2.4 UniRef50_Q6VA69 Cluster: EcRA; n=12; Pancrustacea|Rep: EcRA - Ae... 34 2.4 UniRef50_O16664 Cluster: Putative uncharacterized protein T27B7.... 34 2.4 UniRef50_P11473 Cluster: Vitamin D3 receptor; n=61; Euteleostomi... 34 2.4 UniRef50_O45460 Cluster: Nuclear hormone receptor family member ... 34 2.4 UniRef50_Q21006 Cluster: Nuclear hormone receptor family member ... 34 2.4 UniRef50_O45521 Cluster: Nuclear hormone receptor family member ... 34 2.4 UniRef50_P34021 Cluster: Ecdysone receptor; n=44; Coelomata|Rep:... 34 2.4 UniRef50_P49881 Cluster: Ecdysone receptor; n=4; Bombyx mori|Rep... 34 2.4 UniRef50_UPI0000E4899F Cluster: PREDICTED: hypothetical protein,... 34 3.2 UniRef50_UPI0000D56354 Cluster: PREDICTED: similar to photorecep... 34 3.2 UniRef50_Q95Y09 Cluster: Nuclear hormone receptor family protein... 34 3.2 UniRef50_Q5XTR0 Cluster: Estrogen receptor-related receptor long... 34 3.2 UniRef50_Q4H2N0 Cluster: Nuclear receptor; n=1; Ciona intestinal... 34 3.2 UniRef50_Q2TUU7 Cluster: Thyroid hormone receptor alpha; n=5; Sc... 34 3.2 UniRef50_Q16IU3 Cluster: Estrogen-related receptor; n=1; Aedes a... 34 3.2 UniRef50_O97120 Cluster: Retinoic acid receptor RXR; n=1; Schist... 34 3.2 UniRef50_O16961 Cluster: Nuclear hormone receptor family protein... 34 3.2 UniRef50_A7S1X5 Cluster: Predicted protein; n=1; Nematostella ve... 34 3.2 UniRef50_A7RZU0 Cluster: Predicted protein; n=1; Nematostella ve... 34 3.2 UniRef50_O95718 Cluster: Steroid hormone receptor ERR2; n=108; C... 34 3.2 UniRef50_P11474 Cluster: Steroid hormone receptor ERR1; n=19; Eu... 34 3.2 UniRef50_UPI0000D5787F Cluster: PREDICTED: similar to CG10296-PA... 33 4.3 UniRef50_Q8WS79 Cluster: Estrogen-related receptor splice varian... 33 4.3 UniRef50_O01448 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3 UniRef50_O45436 Cluster: Nuclear hormone receptor family member ... 33 4.3 UniRef50_UPI0000D5764D Cluster: PREDICTED: similar to CG11783-PA... 33 5.7 UniRef50_Q95Y05 Cluster: Nuclear hormone receptor family protein... 33 5.7 UniRef50_Q86PK8 Cluster: Nuclear receptor NHR-32; n=2; Caenorhab... 33 5.7 UniRef50_Q61UK4 Cluster: Putative uncharacterized protein CBG052... 33 5.7 UniRef50_Q611G9 Cluster: Putative uncharacterized protein CBG170... 33 5.7 UniRef50_Q2L3W9 Cluster: Nuclear receptor; n=9; Arthropoda|Rep: ... 33 5.7 UniRef50_O44337 Cluster: AamEcRA1; n=2; Amblyomma americanum|Rep... 33 5.7 UniRef50_A4F2F2 Cluster: Ecdysone receptor A1; n=11; Arthropoda|... 33 5.7 UniRef50_Q0D1T2 Cluster: Valyl-tRNA synthetase, mitochondrial; n... 33 5.7 UniRef50_Q18192 Cluster: Nuclear hormone receptor family member ... 33 5.7 UniRef50_Q9DFH3 Cluster: Xenobiotic receptor; n=4; Amniota|Rep: ... 33 7.5 UniRef50_Q95QT4 Cluster: Putative uncharacterized protein nhr-13... 33 7.5 UniRef50_Q18896 Cluster: Nuclear hormone receptor family protein... 33 7.5 UniRef50_Q18150 Cluster: Nuclear hormone receptor family protein... 33 7.5 UniRef50_P91829 Cluster: Nuclear hormone receptor family member ... 33 7.5 UniRef50_Q19345 Cluster: Nuclear hormone receptor family member ... 33 7.5 UniRef50_Q23294 Cluster: Nuclear hormone receptor family member ... 33 7.5 UniRef50_UPI00015B40B5 Cluster: PREDICTED: similar to ENSANGP000... 32 9.9 UniRef50_UPI0000DB70A8 Cluster: PREDICTED: similar to estrogen-r... 32 9.9 UniRef50_O75469-6 Cluster: Isoform 2C of O75469 ; n=10; Tetrapod... 32 9.9 UniRef50_Q5LU25 Cluster: Putative uncharacterized protein; n=2; ... 32 9.9 UniRef50_A3VU60 Cluster: Putative para-aminobenzoate synthase; n... 32 9.9 UniRef50_Q9XZJ5 Cluster: Nuclear hormone receptor of the steroid... 32 9.9 UniRef50_Q9UAN6 Cluster: Nuclear receptor NHR-21a; n=7; Caenorha... 32 9.9 UniRef50_Q9GTC6 Cluster: Nuclear receptor NHR-92; n=5; Caenorhab... 32 9.9 UniRef50_O45905 Cluster: Putative uncharacterized protein nhr-23... 32 9.9 UniRef50_O17991 Cluster: Putative uncharacterized protein nhr-26... 32 9.9 UniRef50_O75469 Cluster: Orphan nuclear receptor PXR; n=32; Ther... 32 9.9 >UniRef50_P50239 Cluster: Ecdysone-inducible protein E75; n=17; Endopterygota|Rep: Ecdysone-inducible protein E75 - Galleria mellonella (Wax moth) Length = 711 Score = 147 bits (355), Expect = 3e-34 Identities = 71/75 (94%), Positives = 73/75 (97%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM QSS++RAHEQAAAAELDD PR Sbjct: 98 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-QSSTTRAHEQAAAAELDDGPR 156 Query: 525 LLARVVRAHLDTCEF 569 LLARVVRAHLDTCEF Sbjct: 157 LLARVVRAHLDTCEF 171 Score = 67.7 bits (158), Expect = 2e-10 Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 1/35 (2%) Frame = +2 Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 SC+ +GFFRRSIQQKIQYRPCTKNQQCSILRINR Sbjct: 63 SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 97 >UniRef50_Q0JRL0 Cluster: Ecdysone-induced protein 75C; n=8; Coelomata|Rep: Ecdysone-induced protein 75C - Aedes aegypti (Yellowfever mosquito) Length = 1134 Score = 136 bits (328), Expect = 5e-31 Identities = 62/75 (82%), Positives = 69/75 (92%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS+ +R +++A A ELDD PR Sbjct: 315 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGNQRALATELDDQPR 374 Query: 525 LLARVVRAHLDTCEF 569 LLA V+RAH+DTCEF Sbjct: 375 LLAAVLRAHMDTCEF 389 Score = 67.7 bits (158), Expect = 2e-10 Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 1/35 (2%) Frame = +2 Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 SC+ +GFFRRSIQQKIQYRPCTKNQQCSILRINR Sbjct: 280 SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 314 >UniRef50_P13055 Cluster: Ecdysone-induced protein 75B isoform B; n=10; Coelomata|Rep: Ecdysone-induced protein 75B isoform B - Drosophila melanogaster (Fruit fly) Length = 1412 Score = 134 bits (325), Expect = 1e-30 Identities = 62/75 (82%), Positives = 68/75 (90%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS+ +R ++A A ELDD PR Sbjct: 509 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPR 568 Query: 525 LLARVVRAHLDTCEF 569 LLA V+RAHL+TCEF Sbjct: 569 LLAAVLRAHLETCEF 583 Score = 67.7 bits (158), Expect = 2e-10 Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 1/35 (2%) Frame = +2 Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 SC+ +GFFRRSIQQKIQYRPCTKNQQCSILRINR Sbjct: 474 SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 508 >UniRef50_Q3I5Q8 Cluster: E75 nuclear receptor; n=1; Gecarcinus lateralis|Rep: E75 nuclear receptor - Gecarcinus lateralis (Blackback land crab) Length = 828 Score = 119 bits (287), Expect = 5e-26 Identities = 55/75 (73%), Positives = 66/75 (88%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKA+ILAAM QS ++R+ E+A AEL+D R Sbjct: 83 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAKILAAM-QSVNARSQERAVLAELEDDTR 141 Query: 525 LLARVVRAHLDTCEF 569 + A ++RAH+DTC+F Sbjct: 142 VTAAIIRAHMDTCDF 156 Score = 67.7 bits (158), Expect = 2e-10 Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 1/35 (2%) Frame = +2 Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 SC+ +GFFRRSIQQKIQYRPCTKNQQCSILRINR Sbjct: 48 SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 82 >UniRef50_O77245 Cluster: Nuclear hormone receptor E75; n=9; Coelomata|Rep: Nuclear hormone receptor E75 - Metapenaeus ensis (Greasyback shrimp) (Sand shrimp) Length = 606 Score = 118 bits (284), Expect = 1e-25 Identities = 54/75 (72%), Positives = 66/75 (88%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKA+ILAAM QS ++++ E+A AEL+D R Sbjct: 83 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAKILAAM-QSVNAKSQERAVLAELEDDTR 141 Query: 525 LLARVVRAHLDTCEF 569 + A ++RAH+DTC+F Sbjct: 142 VTAAIIRAHMDTCDF 156 Score = 67.7 bits (158), Expect = 2e-10 Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 1/35 (2%) Frame = +2 Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 SC+ +GFFRRSIQQKIQYRPCTKNQQCSILRINR Sbjct: 48 SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 82 >UniRef50_Q9XUK7 Cluster: Nuclear hormone receptor family member nhr-85; n=3; Caenorhabditis|Rep: Nuclear hormone receptor family member nhr-85 - Caenorhabditis elegans Length = 514 Score = 79.0 bits (186), Expect = 9e-14 Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 6/98 (6%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 NRCQ CRLKKC+AVGMSRDAVRFGRVPKREKAR+ MQ+++ +Q A + ++ Sbjct: 164 NRCQCCRLKKCLAVGMSRDAVRFGRVPKREKARMFEEMQKTNVQSQRDQ-IAIQYENLTE 222 Query: 525 LLARV------VRAHLDTCEFHA*SRRFHASQSFVTVP 620 ++ ++ ++A L+ C + R + +F+ +P Sbjct: 223 VMHKINQAFGTLQATLEKCTGPIYTDRCPITSNFIVIP 260 Score = 48.4 bits (110), Expect = 1e-04 Identities = 21/30 (70%), Positives = 24/30 (80%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 +GFFRRSIQQKI YR CT+ + C ILR NR Sbjct: 134 KGFFRRSIQQKITYRACTRAEDCLILRNNR 163 >UniRef50_Q4RW38 Cluster: Chromosome 9 SCAF14991, whole genome shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 9 SCAF14991, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 539 Score = 78.2 bits (184), Expect = 2e-13 Identities = 35/59 (59%), Positives = 44/59 (74%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521 NRCQ+CR KKC++VGMSRDAVRFGR+PKREK R+L MQ +S ++A E+D P Sbjct: 100 NRCQHCRFKKCLSVGMSRDAVRFGRIPKREKQRLLEEMQSYMNSL--NESAVMEMDSCP 156 Score = 50.0 bits (114), Expect = 5e-05 Identities = 20/30 (66%), Positives = 24/30 (80%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 QGFFRRSIQQ I Y+ C KN+ C I+R+NR Sbjct: 70 QGFFRRSIQQNINYKMCVKNENCLIMRMNR 99 >UniRef50_P20393 Cluster: Orphan nuclear receptor NR1D1; n=25; Theria|Rep: Orphan nuclear receptor NR1D1 - Homo sapiens (Human) Length = 614 Score = 77.4 bits (182), Expect = 3e-13 Identities = 33/59 (55%), Positives = 45/59 (76%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521 NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+LA MQ + + ++ ++ L+ +P Sbjct: 183 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLETSP 241 Score = 53.2 bits (122), Expect = 5e-06 Identities = 22/30 (73%), Positives = 26/30 (86%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 +GFFRRSIQQ IQY+ C KN+ CSI+RINR Sbjct: 153 KGFFRRSIQQNIQYKRCLKNENCSIVRINR 182 >UniRef50_Q6TNS3 Cluster: Nuclear receptor subfamily 1, group D, member 1; n=8; Clupeocephala|Rep: Nuclear receptor subfamily 1, group D, member 1 - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 637 Score = 76.2 bits (179), Expect = 6e-13 Identities = 32/49 (65%), Positives = 40/49 (81%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491 NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+LA MQ + ++ + Q Sbjct: 179 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQNAMNNMVNNQ 227 Score = 52.4 bits (120), Expect = 9e-06 Identities = 21/30 (70%), Positives = 26/30 (86%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 +GFFRRSIQQ IQY+ C KN+ C+I+RINR Sbjct: 149 KGFFRRSIQQNIQYKKCLKNETCTIMRINR 178 >UniRef50_Q4RXZ3 Cluster: Chromosome 11 SCAF14979, whole genome shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 11 SCAF14979, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 720 Score = 76.2 bits (179), Expect = 6e-13 Identities = 34/59 (57%), Positives = 46/59 (77%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521 NRCQ+CR KKC+AVGMSRDAVRFGR+PKREK R+L MQ +S ++A+ +++ +P Sbjct: 292 NRCQHCRFKKCLAVGMSRDAVRFGRIPKREKQRLLDEMQSYMNSL--NESASVDMEMSP 348 Score = 54.0 bits (124), Expect = 3e-06 Identities = 24/40 (60%), Positives = 29/40 (72%) Frame = +2 Query: 224 RDSTKCSCDPQGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 R S S PQGFFRRSIQQ I Y+ C KN++C I+R+NR Sbjct: 252 RCSESFSSLPQGFFRRSIQQNIHYKMCVKNEKCLIMRMNR 291 >UniRef50_UPI0000F1EFB0 Cluster: PREDICTED: similar to Rev-Erb beta 1; n=1; Danio rerio|Rep: PREDICTED: similar to Rev-Erb beta 1 - Danio rerio Length = 504 Score = 73.3 bits (172), Expect = 4e-12 Identities = 32/56 (57%), Positives = 41/56 (73%) Frame = +3 Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476 +T S + NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L MQ + ++ Sbjct: 125 KTESCTIVRINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLLEMQTAMNN 180 Score = 50.0 bits (114), Expect = 5e-05 Identities = 20/30 (66%), Positives = 25/30 (83%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 +GFFRRSIQQ IQY+ C K + C+I+RINR Sbjct: 107 KGFFRRSIQQNIQYKKCLKTESCTIVRINR 136 >UniRef50_Q90Z65 Cluster: Rev-Erb beta 1; n=5; Euteleostomi|Rep: Rev-Erb beta 1 - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 404 Score = 73.3 bits (172), Expect = 4e-12 Identities = 32/56 (57%), Positives = 41/56 (73%) Frame = +3 Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476 +T S + NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L MQ + ++ Sbjct: 41 KTESCTIVRINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLLEMQTAMNN 96 Score = 50.0 bits (114), Expect = 5e-05 Identities = 20/30 (66%), Positives = 25/30 (83%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 +GFFRRSIQQ IQY+ C K + C+I+RINR Sbjct: 23 KGFFRRSIQQNIQYKKCLKTESCTIVRINR 52 >UniRef50_Q1L684 Cluster: Rev-erbgamma-A; n=7; Clupeocephala|Rep: Rev-erbgamma-A - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 462 Score = 73.3 bits (172), Expect = 4e-12 Identities = 31/44 (70%), Positives = 37/44 (84%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476 NRCQ+CR KKC++VGMSRDAVRFGR+PKREK R+L MQ +S Sbjct: 57 NRCQHCRFKKCLSVGMSRDAVRFGRIPKREKQRLLDEMQSYMNS 100 Score = 48.4 bits (110), Expect = 1e-04 Identities = 19/30 (63%), Positives = 24/30 (80%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 +GFFRRSIQQ I Y+ C KN+ C I+R+NR Sbjct: 27 KGFFRRSIQQNINYKMCVKNENCLIMRMNR 56 >UniRef50_Q14995 Cluster: Orphan nuclear receptor NR1D2; n=48; Euteleostomi|Rep: Orphan nuclear receptor NR1D2 - Homo sapiens (Human) Length = 579 Score = 73.3 bits (172), Expect = 4e-12 Identities = 31/49 (63%), Positives = 38/49 (77%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491 NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L MQ + + + Q Sbjct: 154 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ 202 Score = 52.8 bits (121), Expect = 7e-06 Identities = 21/30 (70%), Positives = 26/30 (86%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 +GFFRRSIQQ IQY+ C KN+ CSI+R+NR Sbjct: 124 KGFFRRSIQQNIQYKKCLKNENCSIMRMNR 153 >UniRef50_Q90Z63 Cluster: Rev-Erb beta; n=3; Euteleostei|Rep: Rev-Erb beta - Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri) Length = 461 Score = 72.1 bits (169), Expect = 1e-11 Identities = 30/44 (68%), Positives = 37/44 (84%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476 NRCQ CR KKC+AVGMSRD+VRFGR+PKREK R+L MQ + ++ Sbjct: 28 NRCQQCRFKKCLAVGMSRDSVRFGRIPKREKQRMLLEMQNAMNN 71 Score = 38.3 bits (85), Expect = 0.15 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = +2 Query: 263 FRRSIQQKIQYRPCTKNQQCSILRINR 343 FRRSIQ +Y+ C K + C+++RINR Sbjct: 1 FRRSIQHSTRYKKCLKMENCTVIRINR 27 >UniRef50_UPI00004D0DA7 Cluster: Orphan nuclear receptor NR1D2 (Rev-erb-beta) (EAR-1R) (Orphan nuclear hormone receptor BD73).; n=1; Xenopus tropicalis|Rep: Orphan nuclear receptor NR1D2 (Rev-erb-beta) (EAR-1R) (Orphan nuclear hormone receptor BD73). - Xenopus tropicalis Length = 571 Score = 68.1 bits (159), Expect = 2e-10 Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRD--AVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDD 515 NRCQ CR KKC++VGMSRD AVRFGR+PKREK R+L MQ + Q + + L + Sbjct: 168 NRCQQCRFKKCLSVGMSRDATAVRFGRIPKREKQRMLIEMQTVMKTMMSNQFSGSSLQE 226 Score = 54.0 bits (124), Expect = 3e-06 Identities = 22/30 (73%), Positives = 26/30 (86%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 +GFFRRSIQQ IQY+ C KN+ CSI+RINR Sbjct: 138 KGFFRRSIQQNIQYKKCLKNESCSIIRINR 167 >UniRef50_A7LC92 Cluster: Nuclear receptor; n=2; Onchocercidae|Rep: Nuclear receptor - Brugia malayi (Filarial nematode worm) Length = 656 Score = 68.1 bits (159), Expect = 2e-10 Identities = 33/73 (45%), Positives = 46/73 (63%) Frame = +3 Query: 300 PARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSR 479 P R+ + + NRCQ+CRL+KCI VGMSR+AVRFGRVPK EK R+ + + ++R Sbjct: 209 PCTRSQQCIVARNNRNRCQHCRLQKCIRVGMSREAVRFGRVPKHEKVRMAEELAR-VTAR 267 Query: 480 AHEQAAAAELDDA 518 A + L D+ Sbjct: 268 TLTDAVQSALTDS 280 Score = 56.0 bits (129), Expect = 7e-07 Identities = 23/30 (76%), Positives = 27/30 (90%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 +GFFRRSIQQKIQYRPCT++QQC + R NR Sbjct: 194 KGFFRRSIQQKIQYRPCTRSQQCIVARNNR 223 >UniRef50_UPI0000588E36 Cluster: PREDICTED: similar to peroxisome proliferator activated receptor; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to peroxisome proliferator activated receptor - Strongylocentrotus purpuratus Length = 378 Score = 66.1 bits (154), Expect = 7e-10 Identities = 29/74 (39%), Positives = 43/74 (58%) Frame = +3 Query: 288 YNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS 467 Y P +T + T N+CQYCR +KC+ VGMS DA RFGR+P+ E+ R+L ++ Sbjct: 58 YKPCPFVKTEPCKINIATRNKCQYCRFQKCMQVGMSHDASRFGRMPREERLRLLEELKDE 117 Query: 468 SSSRAHEQAAAAEL 509 + E+ AE+ Sbjct: 118 ETEATEEEKHRAEI 131 >UniRef50_Q4H2X6 Cluster: Nuclear receptor; n=3; Ciona intestinalis|Rep: Nuclear receptor - Ciona intestinalis (Transparent sea squirt) Length = 644 Score = 64.5 bits (150), Expect = 2e-09 Identities = 23/43 (53%), Positives = 36/43 (83%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473 N+CQ+CR KKC+ +GMSRDA+RFGR+P+ EK +I+ +++ S+ Sbjct: 98 NKCQFCRFKKCVGLGMSRDAIRFGRMPRHEKQQIIQEIEKKSN 140 >UniRef50_UPI0000D55BCD Cluster: PREDICTED: similar to CG18023-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG18023-PA, isoform A - Tribolium castaneum Length = 363 Score = 64.1 bits (149), Expect = 3e-09 Identities = 29/74 (39%), Positives = 45/74 (60%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRL 527 RCQYCR KKC++VGMSRD+VR+GRVPKR + R + +++ A + + + + Sbjct: 51 RCQYCRFKKCLSVGMSRDSVRYGRVPKRSRERSTEESSRVTTTDADQSDSETKQLAVYDV 110 Query: 528 LARVVRAHLDTCEF 569 + V +AH C + Sbjct: 111 ILTVSQAHHANCGY 124 >UniRef50_P45447 Cluster: Ecdysone-induced protein 78C; n=5; Diptera|Rep: Ecdysone-induced protein 78C - Drosophila melanogaster (Fruit fly) Length = 866 Score = 63.7 bits (148), Expect = 3e-09 Identities = 32/61 (52%), Positives = 41/61 (67%) Frame = +3 Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDD 515 L NRCQYCR KKC++ GMSRD+VR+GRVPKR + AA +SS A A+ +DD Sbjct: 414 LNRNRCQYCRFKKCLSAGMSRDSVRYGRVPKRSRELNGAA----ASSAAAGAPASLNVDD 469 Query: 516 A 518 + Sbjct: 470 S 470 Score = 41.5 bits (93), Expect = 0.016 Identities = 18/35 (51%), Positives = 29/35 (82%), Gaps = 1/35 (2%) Frame = +2 Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 SC+ +GFFRRSIQ++I+YR C ++ +C ++R+NR Sbjct: 383 SCEGCKGFFRRSIQKQIEYR-CLRDGKCLVIRLNR 416 >UniRef50_A7MAD3 Cluster: Ecdysone-induced protein 78C; n=3; Endopterygota|Rep: Ecdysone-induced protein 78C - Aedes aegypti (Yellowfever mosquito) Length = 431 Score = 63.3 bits (147), Expect = 5e-09 Identities = 25/34 (73%), Positives = 30/34 (88%) Frame = +3 Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 L NRCQYCR KKC+AVGMSRD+VR+GRVPK+ + Sbjct: 73 LNRNRCQYCRFKKCLAVGMSRDSVRYGRVPKKSR 106 Score = 41.5 bits (93), Expect = 0.016 Identities = 18/35 (51%), Positives = 29/35 (82%), Gaps = 1/35 (2%) Frame = +2 Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 SC+ +GFFRRSIQ++I+YR C ++ +C ++R+NR Sbjct: 42 SCEGCKGFFRRSIQKQIEYR-CLRDGKCLVIRLNR 75 >UniRef50_Q4H2V7 Cluster: Nuclear receptor; n=1; Ciona intestinalis|Rep: Nuclear receptor - Ciona intestinalis (Transparent sea squirt) Length = 597 Score = 62.9 bits (146), Expect = 6e-09 Identities = 27/56 (48%), Positives = 40/56 (71%) Frame = +3 Query: 285 RYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452 +Y + RT S+ + NRCQ CR KC+ VGMS+DAV++GR+PK++KAR++A Sbjct: 80 KYRSCILDRTCSITK--INRNRCQTCRFMKCLYVGMSKDAVKYGRIPKKQKARLIA 133 Score = 45.2 bits (102), Expect = 0.001 Identities = 20/35 (57%), Positives = 27/35 (77%), Gaps = 1/35 (2%) Frame = +2 Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 SC+ +GFFRR+I QKI+YR C ++ CSI +INR Sbjct: 63 SCEGCKGFFRRTIHQKIKYRSCILDRTCSITKINR 97 >UniRef50_P51449 Cluster: Nuclear receptor ROR-gamma; n=34; Amniota|Rep: Nuclear receptor ROR-gamma - Homo sapiens (Human) Length = 518 Score = 62.9 bits (146), Expect = 6e-09 Identities = 25/49 (51%), Positives = 38/49 (77%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491 NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ R +Q Sbjct: 81 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 129 >UniRef50_P35398 Cluster: Nuclear receptor ROR-alpha; n=84; Euteleostomi|Rep: Nuclear receptor ROR-alpha - Homo sapiens (Human) Length = 556 Score = 62.5 bits (145), Expect = 8e-09 Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491 NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++ + A +Q+ R H+Q Sbjct: 156 NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 207 >UniRef50_Q2LYQ2 Cluster: GA14768-PA; n=1; Drosophila pseudoobscura|Rep: GA14768-PA - Drosophila pseudoobscura (Fruit fly) Length = 729 Score = 62.1 bits (144), Expect = 1e-08 Identities = 30/62 (48%), Positives = 38/62 (61%) Frame = +3 Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDD 515 L NRCQYCR KKC++ GMSRD+VR+GRVPKR + + A + S A + L Sbjct: 323 LNRNRCQYCRFKKCLSAGMSRDSVRYGRVPKRSR-ELNGAGSTAGGSGATSTSGCPLLAG 381 Query: 516 AP 521 AP Sbjct: 382 AP 383 Score = 41.5 bits (93), Expect = 0.016 Identities = 18/35 (51%), Positives = 29/35 (82%), Gaps = 1/35 (2%) Frame = +2 Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 SC+ +GFFRRSIQ++I+YR C ++ +C ++R+NR Sbjct: 292 SCEGCKGFFRRSIQKQIEYR-CLRDGKCLVIRLNR 325 >UniRef50_P41828 Cluster: Nuclear hormone receptor family member nhr-23; n=7; Caenorhabditis|Rep: Nuclear hormone receptor family member nhr-23 - Caenorhabditis elegans Length = 588 Score = 62.1 bits (144), Expect = 1e-08 Identities = 25/46 (54%), Positives = 35/46 (76%) Frame = +3 Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446 R + V + NRCQYCRLKKCI +GMSRDAV+FGR+ K+++ ++ Sbjct: 201 RQKNCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGRMSKKQREKV 246 >UniRef50_Q4RV24 Cluster: Chromosome 15 SCAF14992, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 15 SCAF14992, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 547 Score = 61.7 bits (143), Expect = 1e-08 Identities = 24/45 (53%), Positives = 37/45 (82%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSR 479 NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ S+ Sbjct: 58 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKSQ 102 >UniRef50_A1DYE6 Cluster: Nuclear receptor-like protein; n=1; Trichinella spiralis|Rep: Nuclear receptor-like protein - Trichinella spiralis (Trichina worm) Length = 358 Score = 61.7 bits (143), Expect = 1e-08 Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 7/85 (8%) Frame = +3 Query: 336 LTGNRCQYCRLKKCIAVGMSRD-----AVRFGRVPKREKARILAAMQQSSSSRAHEQAAA 500 L NRCQYCR KKC+AVGMSRD AVR+GRVPKR + R+ ++ +S + E Sbjct: 176 LNRNRCQYCRFKKCLAVGMSRDFAFFSAVRYGRVPKRSRDRMQEDVRVTSMTGESEVDNE 235 Query: 501 AELDDAP--RLLARVVRAHLDTCEF 569 E ++ V +AH C + Sbjct: 236 VEKHQLALYDIILSVSQAHHSNCNY 260 Score = 40.3 bits (90), Expect = 0.037 Identities = 18/35 (51%), Positives = 28/35 (80%), Gaps = 1/35 (2%) Frame = +2 Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 SC+ +GFFRRSIQ++I+YR C ++ +C + R+NR Sbjct: 145 SCEGCKGFFRRSIQKQIEYR-CLRDGKCLVYRLNR 178 >UniRef50_P37231 Cluster: Peroxisome proliferator-activated receptor gamma; n=97; Craniata|Rep: Peroxisome proliferator-activated receptor gamma - Homo sapiens (Human) Length = 505 Score = 61.7 bits (143), Expect = 1e-08 Identities = 25/50 (50%), Positives = 35/50 (70%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494 N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA + E A Sbjct: 188 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 237 >UniRef50_UPI0000F21513 Cluster: PREDICTED: hypothetical protein; n=1; Danio rerio|Rep: PREDICTED: hypothetical protein - Danio rerio Length = 433 Score = 61.3 bits (142), Expect = 2e-08 Identities = 29/63 (46%), Positives = 42/63 (66%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 NRCQ CRLKKC+A GMSRDAV+FGR+ KR++ + A +++ R H++ A + + Sbjct: 61 NRCQSCRLKKCVAQGMSRDAVKFGRMSKRQRDSLFAEVER---HRQHQRLQANSVQEPQP 117 Query: 525 LLA 533 L A Sbjct: 118 LQA 120 >UniRef50_Q1L678 Cluster: RORgamma-B; n=13; Euteleostomi|Rep: RORgamma-B - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 480 Score = 61.3 bits (142), Expect = 2e-08 Identities = 24/40 (60%), Positives = 35/40 (87%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ 464 NRCQ+CRL+KC+A+GMSRDAVRFGR+ K+++ + A +Q+ Sbjct: 60 NRCQHCRLQKCLALGMSRDAVRFGRMSKKQRDSLYAEVQR 99 >UniRef50_UPI0000F2CB6C Cluster: PREDICTED: similar to beta-1,4-N-acetyl-galactosaminyl transferase 1,; n=1; Monodelphis domestica|Rep: PREDICTED: similar to beta-1,4-N-acetyl-galactosaminyl transferase 1, - Monodelphis domestica Length = 557 Score = 60.9 bits (141), Expect = 2e-08 Identities = 24/50 (48%), Positives = 39/50 (78%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494 NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ ++ Q+ Sbjct: 149 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQRHQQNQEAGQS 198 >UniRef50_P31396 Cluster: Probable nuclear hormone receptor HR3; n=21; Protostomia|Rep: Probable nuclear hormone receptor HR3 - Drosophila melanogaster (Fruit fly) Length = 487 Score = 60.9 bits (141), Expect = 2e-08 Identities = 29/71 (40%), Positives = 41/71 (57%) Frame = +3 Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488 R V + NRCQYCRL+KC+ +GMSRDAV+FGR+ K+++ ++ R H Sbjct: 89 RNKQCVVDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKKQREKV------EDEVRFHR 142 Query: 489 QAAAAELDDAP 521 A+ D AP Sbjct: 143 AQMRAQSDAAP 153 Score = 34.3 bits (75), Expect = 2.4 Identities = 14/30 (46%), Positives = 21/30 (70%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 +GFFRRS + Y+ C +N+QC + R+NR Sbjct: 72 KGFFRRSQSSVVNYQ-CPRNKQCVVDRVNR 100 >UniRef50_UPI0000584695 Cluster: PREDICTED: similar to ecdysone-induced protein 75b; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to ecdysone-induced protein 75b - Strongylocentrotus purpuratus Length = 356 Score = 60.5 bits (140), Expect = 3e-08 Identities = 25/31 (80%), Positives = 28/31 (90%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 NRCQYCRLKKC+AVGMS+DAVR GR PK+ K Sbjct: 64 NRCQYCRLKKCLAVGMSKDAVRLGRCPKKCK 94 Score = 46.8 bits (106), Expect = 4e-04 Identities = 18/30 (60%), Positives = 24/30 (80%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 +GFFRRSIQ ++YR C+K +C I+RINR Sbjct: 34 KGFFRRSIQHNVKYRVCSKGDECLIMRINR 63 >UniRef50_Q90Z66 Cluster: Peroxisome proliferator-activated receptor beta 2; n=21; Clupeocephala|Rep: Peroxisome proliferator-activated receptor beta 2 - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 368 Score = 60.5 bits (140), Expect = 3e-08 Identities = 21/38 (55%), Positives = 33/38 (86%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM 458 N+CQYCR +KC+A+GMS DA+R+GR+P+ EK +++A + Sbjct: 52 NKCQYCRFQKCLALGMSHDAIRYGRMPEAEKKKLVAGL 89 >UniRef50_Q0KFU8 Cluster: HR3 isoform B1; n=3; Blattella germanica|Rep: HR3 isoform B1 - Blattella germanica (German cockroach) Length = 651 Score = 60.5 bits (140), Expect = 3e-08 Identities = 28/71 (39%), Positives = 42/71 (59%) Frame = +3 Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488 R + V + NRCQYCRL+KC+ +GMSRDAV+FGR+ K+++ ++ R H Sbjct: 120 RNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKV------EDEVRFHR 173 Query: 489 QAAAAELDDAP 521 A+ + AP Sbjct: 174 AQLRAQTETAP 184 Score = 32.3 bits (70), Expect = 9.9 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 +GFFRRS + Y+ C +N+ C + R+NR Sbjct: 103 KGFFRRSQSSVVNYQ-CPRNKNCVVDRVNR 131 >UniRef50_Q967S3 Cluster: Nuclear receptor nhr-7A; n=4; Onchocercidae|Rep: Nuclear receptor nhr-7A - Dirofilaria immitis (Canine heartworm) Length = 556 Score = 60.1 bits (139), Expect = 4e-08 Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 3/81 (3%) Frame = +3 Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKR---EKARILAAMQQSSSSRAHEQAAAAE 506 L NRCQ+CR +KC+AVGMSRD+VR+GR P+R E + +S H + A Sbjct: 210 LNRNRCQFCRFRKCLAVGMSRDSVRYGRTPRRKGDETDNENVPSWEETSKFTHYEIADIA 269 Query: 507 LDDAPRLLARVVRAHLDTCEF 569 + V AH C + Sbjct: 270 NSRLRNFIESVAEAHTTCCSY 290 Score = 38.3 bits (85), Expect = 0.15 Identities = 16/30 (53%), Positives = 25/30 (83%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 +GFFRRSIQ++++YR C ++ +C I R+NR Sbjct: 184 KGFFRRSIQKQMEYR-CLRDGKCHIHRLNR 212 >UniRef50_UPI0000E481C8 Cluster: PREDICTED: similar to nuclear hormone receptor E75; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to nuclear hormone receptor E75 - Strongylocentrotus purpuratus Length = 742 Score = 59.3 bits (137), Expect = 8e-08 Identities = 24/43 (55%), Positives = 35/43 (81%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473 N+CQ CRL+KCI +GMS++AVRFGR+ KREK ++ M++ S+ Sbjct: 103 NQCQSCRLRKCILMGMSKNAVRFGRMSKREKMKLTQVMKEISN 145 Score = 39.9 bits (89), Expect = 0.049 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%) Frame = +2 Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 SC+ +GFFRR++Q + YRPC +C I R NR Sbjct: 68 SCEGCKGFFRRTVQHNLTYRPCPNGGKCVIQRKNR 102 >UniRef50_Q9BWQ7 Cluster: Peroxisome proliferator-activated receptor alpha; n=15; Euteleostomi|Rep: Peroxisome proliferator-activated receptor alpha - Homo sapiens (Human) Length = 258 Score = 59.3 bits (137), Expect = 8e-08 Identities = 22/36 (61%), Positives = 31/36 (86%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452 N+CQYCR KC++VGMS +A+RFGR+P+ EKA++ A Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186 >UniRef50_Q07869 Cluster: Peroxisome proliferator-activated receptor alpha; n=113; Gnathostomata|Rep: Peroxisome proliferator-activated receptor alpha - Homo sapiens (Human) Length = 468 Score = 59.3 bits (137), Expect = 8e-08 Identities = 22/36 (61%), Positives = 31/36 (86%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452 N+CQYCR KC++VGMS +A+RFGR+P+ EKA++ A Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186 >UniRef50_UPI0000EB467C Cluster: UPI0000EB467C related cluster; n=1; Canis lupus familiaris|Rep: UPI0000EB467C UniRef100 entry - Canis familiaris Length = 501 Score = 58.4 bits (135), Expect = 1e-07 Identities = 22/40 (55%), Positives = 35/40 (87%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ 464 NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +++ Sbjct: 59 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVKK 98 >UniRef50_Q90Y02 Cluster: Peroxisome proliferator-activated receptor; n=1; Petromyzon marinus|Rep: Peroxisome proliferator-activated receptor - Petromyzon marinus (Sea lamprey) Length = 436 Score = 58.4 bits (135), Expect = 1e-07 Identities = 21/36 (58%), Positives = 31/36 (86%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452 N+CQ+CR +KC+ VGMS +A+RFGR+P+ EK R++A Sbjct: 13 NKCQHCRFQKCLGVGMSHEAIRFGRMPQAEKKRLIA 48 >UniRef50_Q4RVW1 Cluster: Chromosome 9 SCAF14991, whole genome shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 9 SCAF14991, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 463 Score = 58.4 bits (135), Expect = 1e-07 Identities = 20/43 (46%), Positives = 34/43 (79%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473 N+CQYCR +KC+++GMS DA+R+GR+P+ E+ +++A + S Sbjct: 79 NKCQYCRFQKCLSLGMSHDAIRYGRMPEAERKKLVAGLLAEES 121 >UniRef50_Q4H2V2 Cluster: Nuclear receptor; n=2; Ciona intestinalis|Rep: Nuclear receptor - Ciona intestinalis (Transparent sea squirt) Length = 802 Score = 58.4 bits (135), Expect = 1e-07 Identities = 23/54 (42%), Positives = 37/54 (68%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAE 506 NRCQ+CRL+KC+ GMS+DAV+FGR+ K+++ R+ + + RA + +E Sbjct: 215 NRCQHCRLQKCLRAGMSKDAVKFGRMSKKQRDRLYLEVLKQQQMRAGQPQVESE 268 >UniRef50_O02643 Cluster: Hormone receptor 3C; n=1; Choristoneura fumiferana|Rep: Hormone receptor 3C - Choristoneura fumiferana (Spruce budworm) Length = 651 Score = 58.0 bits (134), Expect = 2e-07 Identities = 22/46 (47%), Positives = 34/46 (73%) Frame = +3 Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446 R + V + NRCQYCRL+KC+ +GM RDAV+FGR+ K+++ ++ Sbjct: 72 RNKACVVDRVNRNRCQYCRLQKCLKLGMRRDAVKFGRMSKKQREKV 117 >UniRef50_Q2TUU3 Cluster: Ecdysone-induced protein E78; n=3; Schistosoma|Rep: Ecdysone-induced protein E78 - Schistosoma mansoni (Blood fluke) Length = 591 Score = 57.6 bits (133), Expect = 2e-07 Identities = 21/34 (61%), Positives = 29/34 (85%) Frame = +3 Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 L NRCQYCR +KC+A GMS+D+VR+GR+P+R + Sbjct: 336 LNRNRCQYCRFRKCLAAGMSKDSVRYGRMPRRTR 369 Score = 40.3 bits (90), Expect = 0.037 Identities = 17/35 (48%), Positives = 29/35 (82%), Gaps = 1/35 (2%) Frame = +2 Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 SC+ +GFFRRSIQ++I+Y+ C ++ +C ++R+NR Sbjct: 305 SCEGCKGFFRRSIQKQIEYK-CLRDGKCLVIRLNR 338 >UniRef50_Q4SHA3 Cluster: Chromosome 19 SCAF14584, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 19 SCAF14584, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 500 Score = 56.8 bits (131), Expect = 4e-07 Identities = 21/36 (58%), Positives = 30/36 (83%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452 N+CQYCR KC++VGMS +A+RFGR+P+ EK ++ A Sbjct: 139 NKCQYCRFHKCLSVGMSHNAIRFGRMPQAEKLKLKA 174 >UniRef50_UPI0000E494CA Cluster: PREDICTED: similar to peroxisome proliferator-activated receptor alpha; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to peroxisome proliferator-activated receptor alpha - Strongylocentrotus purpuratus Length = 504 Score = 53.6 bits (123), Expect = 4e-06 Identities = 24/51 (47%), Positives = 34/51 (66%) Frame = +3 Query: 321 VVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473 +V+ G T N+CQYCR +KCI +GMS AVR GRVPK E ++ + + + Sbjct: 155 IVNIG-TRNKCQYCRYQKCIILGMSSTAVRMGRVPKVEVLKLKTELDEKDN 204 >UniRef50_Q4SGI2 Cluster: Chromosome undetermined SCAF14594, whole genome shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome undetermined SCAF14594, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 588 Score = 52.8 bits (121), Expect = 7e-06 Identities = 23/39 (58%), Positives = 29/39 (74%) Frame = +2 Query: 227 DSTKCSCDPQGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 D + S QGFFRRSIQQ IQY+ C K++ C+I+RINR Sbjct: 18 DLSPSSRRQQGFFRRSIQQNIQYKKCLKSESCAIMRINR 56 >UniRef50_UPI0000586F42 Cluster: PREDICTED: similar to GA17350-PA; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to GA17350-PA - Strongylocentrotus purpuratus Length = 573 Score = 52.4 bits (120), Expect = 9e-06 Identities = 25/52 (48%), Positives = 33/52 (63%) Frame = +3 Query: 312 TSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS 467 T V + T NRC YCR KKC+AVGMS+ A + GR K+ KA+I + +S Sbjct: 148 TKQCVINKETRNRCMYCRWKKCVAVGMSKTASKLGRRSKQLKAQIAKHLPKS 199 >UniRef50_UPI00005864C9 Cluster: PREDICTED: similar to E75 nuclear receptor; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to E75 nuclear receptor - Strongylocentrotus purpuratus Length = 393 Score = 52.4 bits (120), Expect = 9e-06 Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 2/73 (2%) Frame = +3 Query: 339 TGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDA 518 T RC +CR +KC+AVGMS +VR GR K++K + LA +Q S EQ E D Sbjct: 66 TRGRCAHCRYQKCLAVGMSVHSVRVGRYSKKQKMKNLAEIQ---SLATPEQIVERERKDR 122 Query: 519 P--RLLARVVRAH 551 L+ +VV AH Sbjct: 123 EIYALIQKVVNAH 135 >UniRef50_Q66MI8 Cluster: COUP-TF1 nuclear orphan receptor; n=2; Hydra vulgaris|Rep: COUP-TF1 nuclear orphan receptor - Hydra attenuata (Hydra) (Hydra vulgaris) Length = 453 Score = 52.0 bits (119), Expect = 1e-05 Identities = 20/28 (71%), Positives = 25/28 (89%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK 428 N+CQYCRLKKC+ VGM +DAV+ GR+PK Sbjct: 32 NQCQYCRLKKCVKVGMRKDAVQKGRLPK 59 >UniRef50_UPI0000E4819E Cluster: PREDICTED: similar to Nr1h3 protein; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to Nr1h3 protein - Strongylocentrotus purpuratus Length = 480 Score = 51.2 bits (117), Expect = 2e-05 Identities = 19/31 (61%), Positives = 25/31 (80%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 NRC CR KKC+ +GMS+DAVR GR+P ++K Sbjct: 74 NRCPACRYKKCLELGMSKDAVRIGRIPNKQK 104 >UniRef50_Q1W404 Cluster: RAR-like nuclear receptor; n=5; Schistosoma|Rep: RAR-like nuclear receptor - Schistosoma mansoni (Blood fluke) Length = 715 Score = 51.2 bits (117), Expect = 2e-05 Identities = 27/71 (38%), Positives = 41/71 (57%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 N+CQ CRL KCIAVGMSRDAVR R K+ + ++ SS +++ +A + Sbjct: 317 NKCQQCRLLKCIAVGMSRDAVRKRRQGKKREQSSCESVTLPSSDSSNKYEGSAYSSCSAD 376 Query: 525 LLARVVRAHLD 557 ++ +AHL+ Sbjct: 377 VVLTPSKAHLN 387 >UniRef50_P13631 Cluster: Retinoic acid receptor gamma-1; n=5; Coelomata|Rep: Retinoic acid receptor gamma-1 - Homo sapiens (Human) Length = 454 Score = 51.2 bits (117), Expect = 2e-05 Identities = 29/84 (34%), Positives = 49/84 (58%) Frame = +3 Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488 R + + + +T NRCQYCRL+KC VGMS++AVR R K+++ +++ S ++E Sbjct: 128 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKE------VKEEGSPDSYE 181 Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560 + E L+ +V +AH +T Sbjct: 182 LSPQLE-----ELITKVSKAHQET 200 >UniRef50_Q4REU2 Cluster: Chromosome 13 SCAF15122, whole genome shotgun sequence; n=5; Tetraodontidae|Rep: Chromosome 13 SCAF15122, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 746 Score = 50.4 bits (115), Expect = 3e-05 Identities = 20/27 (74%), Positives = 24/27 (88%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 N+CQYCRLKKC+ VGM R+AV+ GRVP Sbjct: 51 NQCQYCRLKKCLKVGMRREAVQRGRVP 77 Score = 42.3 bits (95), Expect = 0.009 Identities = 16/21 (76%), Positives = 19/21 (90%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAV 407 N+CQYCRLKKC+ VGM R+AV Sbjct: 467 NQCQYCRLKKCLKVGMRREAV 487 >UniRef50_P10589 Cluster: COUP transcription factor 1; n=130; Eumetazoa|Rep: COUP transcription factor 1 - Homo sapiens (Human) Length = 423 Score = 49.2 bits (112), Expect = 8e-05 Identities = 19/27 (70%), Positives = 24/27 (88%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 N+CQYCRLKKC+ VGM R+AV+ GR+P Sbjct: 136 NQCQYCRLKKCLKVGMRREAVQRGRMP 162 >UniRef50_P16376 Cluster: Steroid receptor seven-up, isoform A; n=1; Drosophila melanogaster|Rep: Steroid receptor seven-up, isoform A - Drosophila melanogaster (Fruit fly) Length = 746 Score = 49.2 bits (112), Expect = 8e-05 Identities = 19/27 (70%), Positives = 24/27 (88%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 N+CQYCRLKKC+ +GM R+AV+ GRVP Sbjct: 250 NQCQYCRLKKCLKMGMRREAVQRGRVP 276 >UniRef50_Q611B9 Cluster: Putative uncharacterized protein CBG17178; n=1; Caenorhabditis briggsae|Rep: Putative uncharacterized protein CBG17178 - Caenorhabditis briggsae Length = 538 Score = 48.8 bits (111), Expect = 1e-04 Identities = 29/75 (38%), Positives = 36/75 (48%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 NRCQYCR KKC+ GMS+D+V R KR K +S R E DD Sbjct: 209 NRCQYCRFKKCLDAGMSKDSV---RQTKRNK--------PPTSDRTVSSTVNVEPDDHII 257 Query: 525 LLARVVRAHLDTCEF 569 R++ HL TC + Sbjct: 258 CADRIIDLHLKTCNY 272 Score = 40.3 bits (90), Expect = 0.037 Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Frame = +2 Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCAIRS 418 SC+ +GFFRRSIQ+KI YR C K Q C I R +R +K + S Sbjct: 175 SCEGCKGFFRRSIQRKIDYR-CLKQQFCEIRRDSRNRCQYCRFKKCLDAGMSK-----DS 228 Query: 419 CTQTRESAYPRSDATV 466 QT+ + P SD TV Sbjct: 229 VRQTKRNKPPTSDRTV 244 >UniRef50_A7S1X4 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 391 Score = 48.8 bits (111), Expect = 1e-04 Identities = 18/27 (66%), Positives = 24/27 (88%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 N+CQYCRLKKC+ VGM ++AV+ GR+P Sbjct: 82 NQCQYCRLKKCLKVGMRKEAVQKGRIP 108 >UniRef50_P10276 Cluster: Retinoic acid receptor alpha; n=207; Eumetazoa|Rep: Retinoic acid receptor alpha - Homo sapiens (Human) Length = 462 Score = 48.8 bits (111), Expect = 1e-04 Identities = 20/43 (46%), Positives = 31/43 (72%) Frame = +3 Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 R + + + +T NRCQYCRL+KC VGMS+++VR R K+++ Sbjct: 126 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 168 >UniRef50_UPI0000F2CA65 Cluster: PREDICTED: similar to DNA (cytosine-5-)-methyltransferase 3 alpha,; n=2; Theria|Rep: PREDICTED: similar to DNA (cytosine-5-)-methyltransferase 3 alpha, - Monodelphis domestica Length = 732 Score = 48.0 bits (109), Expect = 2e-04 Identities = 18/27 (66%), Positives = 23/27 (85%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 N+CQYCRLKKC VGM ++AV+ GR+P Sbjct: 444 NQCQYCRLKKCFRVGMRKEAVQRGRIP 470 >UniRef50_Q26641 Cluster: COUP transcription factor; n=2; Strongylocentrotus purpuratus|Rep: COUP transcription factor - Strongylocentrotus purpuratus (Purple sea urchin) Length = 381 Score = 48.0 bits (109), Expect = 2e-04 Identities = 18/27 (66%), Positives = 24/27 (88%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 N+CQYCRLKKC+ +GM R+AV+ GR+P Sbjct: 191 NQCQYCRLKKCLKMGMRREAVQRGRMP 217 >UniRef50_UPI0000EB22C7 Cluster: UPI0000EB22C7 related cluster; n=1; Canis lupus familiaris|Rep: UPI0000EB22C7 UniRef100 entry - Canis familiaris Length = 476 Score = 47.2 bits (107), Expect = 3e-04 Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = +3 Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP-KREKARILAAMQQSSSSR 479 S V +T N+CQ CR KKCIAVGM+ D R RVP K + +L + S R Sbjct: 43 SCCVIDKITRNQCQLCRFKKCIAVGMAMDLNRLWRVPCKGHRVSLLLIVVLDDSKR 98 >UniRef50_Q173C6 Cluster: Expressed protein; n=1; Aedes aegypti|Rep: Expressed protein - Aedes aegypti (Yellowfever mosquito) Length = 594 Score = 47.2 bits (107), Expect = 3e-04 Identities = 22/53 (41%), Positives = 32/53 (60%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503 N+CQ CRLKKC+ +GM++DAV+ R P+ A++ RA +AA A Sbjct: 178 NQCQACRLKKCLNMGMNKDAVQNERQPRNTATIRPEALRDMEQGRALREAAVA 230 >UniRef50_Q8I748 Cluster: Retinoid X receptor; n=1; Suberites domuncula|Rep: Retinoid X receptor - Suberites domuncula (Sponge) Length = 548 Score = 46.8 bits (106), Expect = 4e-04 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = +3 Query: 339 TGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 T NRCQYCRL+KCIA GM ++AV+ R P+ K Sbjct: 203 TRNRCQYCRLQKCIANGMRKEAVQEERTPQGAK 235 >UniRef50_Q52ZN9 Cluster: Nuclear receptor usp/RXR; n=2; Coelomata|Rep: Nuclear receptor usp/RXR - Polistes fuscatus (Paper wasp) Length = 279 Score = 46.4 bits (105), Expect = 6e-04 Identities = 24/59 (40%), Positives = 35/59 (59%) Frame = +3 Query: 306 RRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRA 482 R S + NRCQYCR +KC+A+GM R+AV+ R +R K R + ++ +SS A Sbjct: 12 REEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEER--QRTKERDQSEVESTSSLHA 68 >UniRef50_A1ZA01 Cluster: CG16801-PB, isoform B; n=5; Endopterygota|Rep: CG16801-PB, isoform B - Drosophila melanogaster (Fruit fly) Length = 744 Score = 46.4 bits (105), Expect = 6e-04 Identities = 21/53 (39%), Positives = 32/53 (60%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503 N+CQ CRLKKC+ +GM++DAV+ R P+ +++ RA +AA A Sbjct: 328 NQCQACRLKKCLQMGMNKDAVQNERQPRNTATIRPETLREMEHGRALREAAVA 380 >UniRef50_Q4H2W2 Cluster: Nuclear receptor; n=4; Ascidiacea|Rep: Nuclear receptor - Ciona intestinalis (Transparent sea squirt) Length = 638 Score = 46.0 bits (104), Expect = 7e-04 Identities = 27/74 (36%), Positives = 42/74 (56%) Frame = +3 Query: 339 TGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDA 518 T +RCQYCRL+KCI GM R++VR R KR K + +S + E + + E++ Sbjct: 346 TRSRCQYCRLQKCIQAGMLRESVRNDRNKKRGKEK----EGKSDQNGVDEPSCSPEIE-- 399 Query: 519 PRLLARVVRAHLDT 560 L+ V + H++T Sbjct: 400 -ALVTSVHKFHVET 412 Score = 35.9 bits (79), Expect = 0.80 Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%) Frame = +2 Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 SC+ +GFFRRS+Q+ +QY C +N+QC I + R Sbjct: 314 SCEGCKGFFRRSVQKNMQY-TCHRNKQCLINKSTR 347 >UniRef50_Q4H2U9 Cluster: Nuclear receptor; n=9; Coelomata|Rep: Nuclear receptor - Ciona intestinalis (Transparent sea squirt) Length = 507 Score = 46.0 bits (104), Expect = 7e-04 Identities = 21/52 (40%), Positives = 29/52 (55%) Frame = +3 Query: 282 RRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 R+Y T R + NRCQYCR +KCI +GM ++AV+ R RE+ Sbjct: 198 RKYLTYTCRDDKDCIIDKRQRNRCQYCRYQKCITMGMKKEAVQEERQKNREQ 249 >UniRef50_Q9Y5X4 Cluster: Photoreceptor-specific nuclear receptor; n=33; Euteleostomi|Rep: Photoreceptor-specific nuclear receptor - Homo sapiens (Human) Length = 410 Score = 46.0 bits (104), Expect = 7e-04 Identities = 21/51 (41%), Positives = 31/51 (60%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497 N+CQ CRLKKC+ GM++DAV+ R P+ L +M+ ++ SR A Sbjct: 98 NQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVHLDSMESNTESRPESLVA 148 >UniRef50_Q24142 Cluster: Nuclear hormone receptor HR78; n=4; Sophophora|Rep: Nuclear hormone receptor HR78 - Drosophila melanogaster (Fruit fly) Length = 601 Score = 46.0 bits (104), Expect = 7e-04 Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP-KREKARILAAMQQSSSS 476 NRCQ+CRL+KC+A GM D+V+ R P K I+AA SS+S Sbjct: 102 NRCQFCRLQKCLASGMRSDSVQHERKPIVDRKEGIIAAAGSSSTS 146 >UniRef50_UPI0000D8B087 Cluster: UPI0000D8B087 related cluster; n=1; Mus musculus|Rep: UPI0000D8B087 UniRef100 entry - Mus musculus Length = 345 Score = 45.6 bits (103), Expect = 0.001 Identities = 23/55 (41%), Positives = 32/55 (58%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAEL 509 N+CQ C LKKC+ GM++DAV+ R P+ L AM+ S SR+ A+ L Sbjct: 69 NQCQACWLKKCLQAGMNQDAVQNERQPRSMAQVHLDAMETGSDSRSEPVVASPAL 123 >UniRef50_P13056 Cluster: Orphan nuclear receptor TR2; n=78; Euteleostomi|Rep: Orphan nuclear receptor TR2 - Homo sapiens (Human) Length = 483 Score = 45.6 bits (103), Expect = 0.001 Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 3/40 (7%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455 NRCQYCRL++CIA GM +D+V+ R P REK+ AA Sbjct: 163 NRCQYCRLQRCIAFGMKQDSVQCERKPIEVSREKSSNCAA 202 >UniRef50_UPI000065F8EB Cluster: Homolog of Gallus gallus "Nuclear orphan receptor ROR-beta.; n=1; Takifugu rubripes|Rep: Homolog of Gallus gallus "Nuclear orphan receptor ROR-beta. - Takifugu rubripes Length = 583 Score = 45.2 bits (102), Expect = 0.001 Identities = 20/40 (50%), Positives = 27/40 (67%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ 464 NRCQ+CRL+KC+A+GMSRD R RV +I A ++ Sbjct: 59 NRCQHCRLQKCLALGMSRDERRGTRVLSMRDRKIQQAFKE 98 >UniRef50_O77230 Cluster: Nuclear hormone receptor; n=1; Brugia pahangi|Rep: Nuclear hormone receptor - Brugia pahangi (Filarial nematode worm) Length = 265 Score = 44.8 bits (101), Expect = 0.002 Identities = 17/29 (58%), Positives = 23/29 (79%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431 +RCQYCR +KCIAVGM ++ VR+G + R Sbjct: 79 SRCQYCRFQKCIAVGMVKEVVRYGSLSGR 107 Score = 33.1 bits (72), Expect = 5.7 Identities = 13/25 (52%), Positives = 20/25 (80%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSI 328 +GFF+R++Q+K QY CT N+ C+I Sbjct: 50 KGFFKRTVQKKAQY-VCTGNKNCTI 73 >UniRef50_UPI0000DB6D60 Cluster: PREDICTED: similar to Orphan nuclear receptor TR4 (Orphan nuclear receptor TAK1); n=2; Apocrita|Rep: PREDICTED: similar to Orphan nuclear receptor TR4 (Orphan nuclear receptor TAK1) - Apis mellifera Length = 546 Score = 44.4 bits (100), Expect = 0.002 Identities = 17/27 (62%), Positives = 22/27 (81%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 NRCQYCRL+KC+A+GM D+V+ R P Sbjct: 201 NRCQYCRLQKCLAMGMRSDSVQHERKP 227 >UniRef50_UPI00006A05FD Cluster: Orphan nuclear receptor TR4 (Orphan nuclear receptor TAK1).; n=1; Xenopus tropicalis|Rep: Orphan nuclear receptor TR4 (Orphan nuclear receptor TAK1). - Xenopus tropicalis Length = 582 Score = 44.4 bits (100), Expect = 0.002 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 3/61 (4%) Frame = +3 Query: 282 RRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILA 452 R+ T R + V + NRCQ+CRLKKC+ +GM ++V+ R P +REKA A Sbjct: 152 RKSLTYSCRSSQDCVINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDIQREKASNCA 211 Query: 453 A 455 A Sbjct: 212 A 212 >UniRef50_Q7Q2K7 Cluster: ENSANGP00000003675; n=1; Anopheles gambiae str. PEST|Rep: ENSANGP00000003675 - Anopheles gambiae str. PEST Length = 756 Score = 44.4 bits (100), Expect = 0.002 Identities = 24/49 (48%), Positives = 27/49 (55%) Frame = +3 Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425 NRR T A T + + NRCQYCR KKCI GM AVR R+P Sbjct: 315 NRRVYTCVADGTCEITKA--QRNRCQYCRFKKCIEQGMVLQAVREDRMP 361 >UniRef50_A7TAF5 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 261 Score = 44.4 bits (100), Expect = 0.002 Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 6/73 (8%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVP-KREKARILAAMQQSS----SSRAHEQAAAAELD 512 RCQYCR +KC+A+GM ++AVR R P R + + L +++++ SS Q A D Sbjct: 65 RCQYCRFQKCLALGMLKEAVREDRAPGGRPRIKSLIGLKENAETFVSSELIIQLIQARPD 124 Query: 513 DAP-RLLARVVRA 548 P R L R+ R+ Sbjct: 125 AIPKRRLIRLPRS 137 >UniRef50_A7MAD8 Cluster: Hormone receptor-like in 4; n=3; Aedes aegypti|Rep: Hormone receptor-like in 4 - Aedes aegypti (Yellowfever mosquito) Length = 1263 Score = 44.4 bits (100), Expect = 0.002 Identities = 24/49 (48%), Positives = 27/49 (55%) Frame = +3 Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425 NRR T A T + + NRCQYCR KKCI GM AVR R+P Sbjct: 861 NRRVYTCVADGTCEITKA--QRNRCQYCRFKKCIEQGMVLQAVREDRMP 907 >UniRef50_O76202 Cluster: Protein ultraspiracle homolog; n=5; Ditrysia|Rep: Protein ultraspiracle homolog - Choristoneura fumiferana (Spruce budworm) Length = 472 Score = 44.4 bits (100), Expect = 0.002 Identities = 24/63 (38%), Positives = 35/63 (55%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 NRCQYCR +KC+A GM R+AV+ R + AR SSS + ++ + L + Sbjct: 169 NRCQYCRYQKCLACGMKREAVQEER---QRNARGAEDAHPSSSVQVSDELSIERLTEMES 225 Query: 525 LLA 533 L+A Sbjct: 226 LVA 228 >UniRef50_Q9W539 Cluster: Hormone receptor 4; n=2; Pancrustacea|Rep: Hormone receptor 4 - Drosophila melanogaster (Fruit fly) Length = 1518 Score = 44.4 bits (100), Expect = 0.002 Identities = 24/49 (48%), Positives = 27/49 (55%) Frame = +3 Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425 NRR T A T + + NRCQYCR KKCI GM AVR R+P Sbjct: 951 NRRVYTCVADGTCEITKA--QRNRCQYCRFKKCIEQGMVLQAVREDRMP 997 >UniRef50_Q95WG3 Cluster: Nuclear receptor AmNR2; n=2; Hexacorallia|Rep: Nuclear receptor AmNR2 - Acropora millepora (Coral) Length = 448 Score = 44.0 bits (99), Expect = 0.003 Identities = 17/30 (56%), Positives = 22/30 (73%) Frame = +3 Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425 ++ NRCQYCR KC+A GM ++AVR R P Sbjct: 133 ISRNRCQYCRFNKCLAQGMLKEAVREDRTP 162 >UniRef50_Q4KXQ1 Cluster: TR4/TR2; n=11; Eumetazoa|Rep: TR4/TR2 - Schistosoma mansoni (Blood fluke) Length = 1943 Score = 44.0 bits (99), Expect = 0.003 Identities = 18/27 (66%), Positives = 22/27 (81%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 NRCQYCRL+KC+AVGM +AV+ R P Sbjct: 654 NRCQYCRLQKCLAVGMRSEAVQNERRP 680 >UniRef50_Q17K29 Cluster: Nuclear hormone receptor; n=2; Culicidae|Rep: Nuclear hormone receptor - Aedes aegypti (Yellowfever mosquito) Length = 630 Score = 44.0 bits (99), Expect = 0.003 Identities = 18/31 (58%), Positives = 23/31 (74%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 NRCQYCRL+KC+A GM D+V+ R P +K Sbjct: 100 NRCQYCRLQKCLACGMRSDSVQHERKPIIDK 130 >UniRef50_O61227 Cluster: Nuclear receptor; n=1; Tenebrio molitor|Rep: Nuclear receptor - Tenebrio molitor (Yellow mealworm) Length = 489 Score = 44.0 bits (99), Expect = 0.003 Identities = 18/31 (58%), Positives = 23/31 (74%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 NRCQYCRL+KC+A GM D+V+ R P +K Sbjct: 80 NRCQYCRLQKCLACGMRSDSVQHERKPIIDK 110 >UniRef50_A7S286 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 344 Score = 44.0 bits (99), Expect = 0.003 Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVP-KREKARILAAMQQSSSS 476 RCQYCR +KC+A+GM ++AVR R P R + + L +++++ + Sbjct: 65 RCQYCRFQKCLALGMLKEAVREDRAPGGRPRIKSLIGLKENAET 108 >UniRef50_UPI0000E479AD Cluster: PREDICTED: similar to MGC79469 protein; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to MGC79469 protein - Strongylocentrotus purpuratus Length = 611 Score = 43.6 bits (98), Expect = 0.004 Identities = 19/39 (48%), Positives = 25/39 (64%) Frame = +3 Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425 R + + S NRCQYCRL KC+ VGM+R A+R +P Sbjct: 242 RDKNCMMSRQKRNRCQYCRLLKCLQVGMNRKAIREDGMP 280 >UniRef50_Q703I8 Cluster: Zinc finger transcription factor; n=2; Tribolium castaneum|Rep: Zinc finger transcription factor - Tribolium castaneum (Red flour beetle) Length = 228 Score = 43.6 bits (98), Expect = 0.004 Identities = 26/81 (32%), Positives = 36/81 (44%) Frame = +3 Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446 G YN + + V + C+ CRL+KC+ VGMS+ R+GR K Sbjct: 30 GRTYNNISSISECKNNGECVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHC 89 Query: 447 LAAMQQSSSSRAHEQAAAAEL 509 L QQ + + AAAA L Sbjct: 90 LLQEQQQAGA---NMAAAANL 107 >UniRef50_P90892 Cluster: Defective fasciculation of axons protein 1; n=2; Caenorhabditis|Rep: Defective fasciculation of axons protein 1 - Caenorhabditis elegans Length = 419 Score = 43.6 bits (98), Expect = 0.004 Identities = 23/52 (44%), Positives = 30/52 (57%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAA 500 N+CQ CRLKKC+ GM++DAV+ R P R A I A+ + E A A Sbjct: 153 NQCQACRLKKCLNKGMNKDAVQNERQP-RNTATIRPALDMDPQNFFREYAGA 203 >UniRef50_P18102 Cluster: Protein tailless; n=10; Diptera|Rep: Protein tailless - Drosophila melanogaster (Fruit fly) Length = 452 Score = 43.6 bits (98), Expect = 0.004 Identities = 20/48 (41%), Positives = 29/48 (60%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488 N+C+ CRL+KC VGM++DAV+ R P+ R AM + + A E Sbjct: 86 NQCRACRLRKCFEVGMNKDAVQHERGPRNSTLRRHMAMYKDAMMGAGE 133 >UniRef50_Q15406 Cluster: Orphan nuclear receptor NR6A1; n=53; Euteleostomi|Rep: Orphan nuclear receptor NR6A1 - Homo sapiens (Human) Length = 480 Score = 43.6 bits (98), Expect = 0.004 Identities = 19/39 (48%), Positives = 25/39 (64%) Frame = +3 Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425 R + V S NRCQYCRL KC+ +GM+R A+R +P Sbjct: 98 RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 136 >UniRef50_Q90WV5 Cluster: Photoreceptor-specific nuclear receptor; n=7; Coelomata|Rep: Photoreceptor-specific nuclear receptor - Gallus gallus (Chicken) Length = 406 Score = 43.2 bits (97), Expect = 0.005 Identities = 25/69 (36%), Positives = 35/69 (50%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 N+CQ CRLKKC+ GM++DAV+ R P R A++ + + E AA D P Sbjct: 86 NQCQACRLKKCLQAGMNKDAVQNERQP-RSTAQVRLDSIELDAELPPEHVAATR--DVPP 142 Query: 525 LLARVVRAH 551 + R H Sbjct: 143 VPCPAPRGH 151 >UniRef50_A5HL80 Cluster: Retinoid X receptor alpha 2; n=2; Clupeocephala|Rep: Retinoid X receptor alpha 2 - Oryzias latipes (Medaka fish) (Japanese ricefish) Length = 118 Score = 43.2 bits (97), Expect = 0.005 Identities = 17/31 (54%), Positives = 24/31 (77%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 NRCQYCR +KC+A+GM R+AV+ R +E+ Sbjct: 54 NRCQYCRYQKCLAMGMKREAVQEERQRGKER 84 >UniRef50_Q16IX1 Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito) Length = 295 Score = 43.2 bits (97), Expect = 0.005 Identities = 20/59 (33%), Positives = 29/59 (49%) Frame = +3 Query: 243 AVTRRASSGDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419 A TR + G YN + + V + C+ CRL+KC+ VGMS+ R+GR Sbjct: 26 ADTRTSFFGRTYNNLSSISECKNNGECVINKKNRTACKACRLRKCLVVGMSKSGSRYGR 84 >UniRef50_UPI000051A33D Cluster: PREDICTED: similar to photoreceptor-specific nuclear receptor isoform b; n=1; Apis mellifera|Rep: PREDICTED: similar to photoreceptor-specific nuclear receptor isoform b - Apis mellifera Length = 402 Score = 42.7 bits (96), Expect = 0.007 Identities = 18/42 (42%), Positives = 25/42 (59%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSS 470 N+CQ CR KC+ V M RDAV+ R P+ + + AA + S Sbjct: 69 NQCQACRFTKCLQVNMKRDAVQHERAPRNTSSLVAAARRGPS 110 >UniRef50_UPI000065FDEF Cluster: Homolog of Gallus gallus "Nuclear orphan receptor ROR-beta.; n=1; Takifugu rubripes|Rep: Homolog of Gallus gallus "Nuclear orphan receptor ROR-beta. - Takifugu rubripes Length = 538 Score = 42.7 bits (96), Expect = 0.007 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 19/64 (29%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRD-------------------AVRFGRVPKREKARILAAMQQS 467 NRCQ+CRL+KC+A+GMSRD AV+FGR+ K+++ + A +Q+ Sbjct: 60 NRCQHCRLQKCLALGMSRDGLWVTFLDSSFSIFFLILLAVKFGRMSKKQRDSLYAEVQKH 119 Query: 468 SSSR 479 S+ Sbjct: 120 QQSQ 123 >UniRef50_Q95WG1 Cluster: Nuclear receptor AmNR4 isoform A; n=3; Acropora millepora|Rep: Nuclear receptor AmNR4 isoform A - Acropora millepora (Coral) Length = 416 Score = 42.7 bits (96), Expect = 0.007 Identities = 17/27 (62%), Positives = 21/27 (77%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 NRCQ CRLKKC+ +GM R+AV+ R P Sbjct: 88 NRCQRCRLKKCLTMGMKREAVQCERKP 114 >UniRef50_Q617F2 Cluster: Putative uncharacterized protein CBG14997; n=1; Caenorhabditis briggsae|Rep: Putative uncharacterized protein CBG14997 - Caenorhabditis briggsae Length = 457 Score = 42.7 bits (96), Expect = 0.007 Identities = 19/28 (67%), Positives = 21/28 (75%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK 428 NRC+ CRLKKC AVGM R+AVR R K Sbjct: 72 NRCRQCRLKKCEAVGMDREAVRTERKKK 99 >UniRef50_Q4H3F3 Cluster: Nuclear receptor; n=1; Ciona intestinalis|Rep: Nuclear receptor - Ciona intestinalis (Transparent sea squirt) Length = 694 Score = 42.7 bits (96), Expect = 0.007 Identities = 18/39 (46%), Positives = 26/39 (66%) Frame = +3 Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425 R+ + V S NRCQ+CRL KC+ +GM+R A+R +P Sbjct: 141 RSKNCVMSRKQRNRCQFCRLLKCLQMGMNRKAIREDGMP 179 >UniRef50_P28702 Cluster: Retinoic acid receptor RXR-beta; n=240; Coelomata|Rep: Retinoic acid receptor RXR-beta - Homo sapiens (Human) Length = 533 Score = 42.7 bits (96), Expect = 0.007 Identities = 17/31 (54%), Positives = 23/31 (74%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 NRCQYCR +KC+A GM R+AV+ R ++K Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285 >UniRef50_Q9XVV3 Cluster: Nuclear hormone receptor family member nhr-67; n=3; Caenorhabditis|Rep: Nuclear hormone receptor family member nhr-67 - Caenorhabditis elegans Length = 416 Score = 42.7 bits (96), Expect = 0.007 Identities = 18/44 (40%), Positives = 27/44 (61%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476 N+C+ CRL+KC+ +GM++DAV+ R P+ R M SS Sbjct: 76 NQCRACRLRKCLEIGMNKDAVQHERGPRNSSLRRQQMMFDHGSS 119 >UniRef50_P41830 Cluster: Steroid hormone receptor family member cnr14; n=3; Caenorhabditis elegans|Rep: Steroid hormone receptor family member cnr14 - Caenorhabditis elegans Length = 534 Score = 42.7 bits (96), Expect = 0.007 Identities = 16/22 (72%), Positives = 19/22 (86%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 NRCQYCR KKC+ GMS+D+VR Sbjct: 201 NRCQYCRFKKCLDSGMSKDSVR 222 Score = 40.3 bits (90), Expect = 0.037 Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 1/35 (2%) Frame = +2 Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 SC+ +GFFRRSIQ+KI YR C K Q C I R +R Sbjct: 167 SCEGCKGFFRRSIQRKIDYR-CLKQQVCEIKRESR 200 >UniRef50_UPI0000DB6EB1 Cluster: PREDICTED: similar to Nuclear Hormone Receptor family member (nhr-91); n=1; Apis mellifera|Rep: PREDICTED: similar to Nuclear Hormone Receptor family member (nhr-91) - Apis mellifera Length = 914 Score = 42.3 bits (95), Expect = 0.009 Identities = 18/27 (66%), Positives = 19/27 (70%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 NRCQYCR KKCI GM AVR R+P Sbjct: 550 NRCQYCRFKKCIEQGMVLQAVREDRMP 576 >UniRef50_Q9NCL0 Cluster: Tailless ortholog; n=3; Coelomata|Rep: Tailless ortholog - Tribolium castaneum (Red flour beetle) Length = 406 Score = 42.3 bits (95), Expect = 0.009 Identities = 22/55 (40%), Positives = 31/55 (56%) Frame = +3 Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443 NR+Y A+ S + N+C+ CRLKKC VGM++DAV+ R P+ R Sbjct: 69 NRQY-VCKAKDEGSCIIDKTHRNQCRACRLKKCQNVGMNKDAVQHERGPRNSTLR 122 >UniRef50_Q95WF8 Cluster: Nuclear receptor AmNR6; n=2; Astrocoeniina|Rep: Nuclear receptor AmNR6 - Acropora millepora (Coral) Length = 340 Score = 42.3 bits (95), Expect = 0.009 Identities = 17/44 (38%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVP-KREKARILAAMQQSSSS 476 RCQ+CR +KC+++GM ++AVR R P R + + L M++++ + Sbjct: 62 RCQFCRFQKCLSLGMLKEAVREDRAPGGRPRIKSLMGMKENADT 105 >UniRef50_Q8WSJ4 Cluster: Hormone receptor 4; n=3; Obtectomera|Rep: Hormone receptor 4 - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm) Length = 743 Score = 42.3 bits (95), Expect = 0.009 Identities = 18/27 (66%), Positives = 19/27 (70%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 NRCQYCR KKCI GM AVR R+P Sbjct: 392 NRCQYCRFKKCIEQGMVLQAVREDRMP 418 >UniRef50_Q26622 Cluster: Orphan steroid hormone receptor 2; n=7; Bilateria|Rep: Orphan steroid hormone receptor 2 - Strongylocentrotus purpuratus (Purple sea urchin) Length = 583 Score = 42.3 bits (95), Expect = 0.009 Identities = 16/31 (51%), Positives = 23/31 (74%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 NRCQYCRL+KC+ +GM D+V+ R P + + Sbjct: 137 NRCQYCRLQKCLDMGMKSDSVQCERSPLKTR 167 Score = 32.3 bits (70), Expect = 9.9 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%) Frame = +2 Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 SC+ +GFF+RSI++ + Y C N+ C I++ NR Sbjct: 103 SCEGCKGFFKRSIRKHLGY-TCRGNKDCQIIKHNR 136 >UniRef50_P13054 Cluster: Knirps-related protein; n=2; Sophophora|Rep: Knirps-related protein - Drosophila melanogaster (Fruit fly) Length = 647 Score = 42.3 bits (95), Expect = 0.009 Identities = 22/72 (30%), Positives = 31/72 (43%) Frame = +3 Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446 G YN + + + + C+ CRLKKC+ VGMS+ R+GR K Sbjct: 39 GRSYNNLSSISDCKNNGECIINKKNRTACKACRLKKCLMVGMSKSGSRYGRRSNWFKIHC 98 Query: 447 LAAMQQSSSSRA 482 L QQ + A Sbjct: 99 LLQEQQQQAVAA 110 >UniRef50_UPI00015B573C Cluster: PREDICTED: similar to thr4; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to thr4 - Nasonia vitripennis Length = 916 Score = 41.9 bits (94), Expect = 0.012 Identities = 22/49 (44%), Positives = 27/49 (55%) Frame = +3 Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425 NRR T A + + + NRCQYCR KKC+ GM AVR R+P Sbjct: 535 NRRIYTCVAEGSCEITKA--QRNRCQYCRFKKCMDQGMVLQAVREDRMP 581 >UniRef50_UPI0000588887 Cluster: PREDICTED: similar to GA10225-PA; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to GA10225-PA - Strongylocentrotus purpuratus Length = 483 Score = 41.9 bits (94), Expect = 0.012 Identities = 17/31 (54%), Positives = 23/31 (74%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 N C YCRLKKC AV M++ AV+ R P+++K Sbjct: 61 NWCPYCRLKKCFAVNMNKSAVQEERGPRKKK 91 >UniRef50_Q4T0V6 Cluster: Chromosome undetermined SCAF10841, whole genome shotgun sequence; n=2; Tetraodon nigroviridis|Rep: Chromosome undetermined SCAF10841, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 467 Score = 41.9 bits (94), Expect = 0.012 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM----QQSSSSRAHEQAAAAELD 512 N+CQ CRLKKC+ GM++DAV+ R P+ L A+ ++ + E + Sbjct: 106 NQCQACRLKKCLQAGMNKDAVQNERQPRSTAQVRLDAIDIDPEKEHLATTREPTTTSSSS 165 Query: 513 DAPRLLARVVRAHL 554 + +L VR H+ Sbjct: 166 SSTAILLHRVRPHV 179 >UniRef50_Q4RXK2 Cluster: Chromosome 11 SCAF14979, whole genome shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 11 SCAF14979, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 621 Score = 41.9 bits (94), Expect = 0.012 Identities = 18/34 (52%), Positives = 26/34 (76%), Gaps = 2/34 (5%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRD--AVRFGRVPKREKA 440 NRCQ+CRL+KC+A+GMSRD +R+ +R+ A Sbjct: 60 NRCQHCRLQKCLALGMSRDEALIRWWASSRRDPA 93 >UniRef50_Q4U1Y2 Cluster: Steroid hormone receptor 3; n=1; Strongylocentrotus purpuratus|Rep: Steroid hormone receptor 3 - Strongylocentrotus purpuratus (Purple sea urchin) Length = 715 Score = 41.9 bits (94), Expect = 0.012 Identities = 16/27 (59%), Positives = 21/27 (77%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 NRCQYCR +KC+ +GM +AVR R+P Sbjct: 321 NRCQYCRFQKCLHMGMMLEAVREDRMP 347 >UniRef50_Q0IGD6 Cluster: Tailless; n=1; Aedes aegypti|Rep: Tailless - Aedes aegypti (Yellowfever mosquito) Length = 397 Score = 41.9 bits (94), Expect = 0.012 Identities = 17/33 (51%), Positives = 23/33 (69%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443 N+C+ CRLKKC VGM++DAV+ R P+ R Sbjct: 85 NQCRACRLKKCFEVGMNKDAVQHERGPRSSTLR 117 >UniRef50_A7S012 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 364 Score = 41.9 bits (94), Expect = 0.012 Identities = 16/33 (48%), Positives = 23/33 (69%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443 N+CQ CRL+KC + M+RDAV+ R P+ + R Sbjct: 54 NQCQACRLRKCFEMNMNRDAVQHERAPRTSQIR 86 >UniRef50_P49116 Cluster: Orphan nuclear receptor TR4; n=13; Eumetazoa|Rep: Orphan nuclear receptor TR4 - Homo sapiens (Human) Length = 596 Score = 41.9 bits (94), Expect = 0.012 Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455 NRCQ+CRLKKC+ +GM ++V+ R P +REK AA Sbjct: 167 NRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPSNCAA 206 >UniRef50_P43354 Cluster: Orphan nuclear receptor NR4A2; n=77; Euteleostomi|Rep: Orphan nuclear receptor NR4A2 - Homo sapiens (Human) Length = 598 Score = 41.9 bits (94), Expect = 0.012 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440 NRCQYCR +KC+AVGM ++ VR GR+P + K+ Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 351 >UniRef50_Q10902 Cluster: Nuclear hormone receptor family member nhr-2; n=4; Caenorhabditis elegans|Rep: Nuclear hormone receptor family member nhr-2 - Caenorhabditis elegans Length = 359 Score = 41.9 bits (94), Expect = 0.012 Identities = 20/51 (39%), Positives = 29/51 (56%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAA 500 RCQ CR KC+AVGM+RD VR + ++ +A+ +S+ E AA Sbjct: 163 RCQACRFAKCLAVGMNRDNVRVNKETDKDVKPSVASPNFEMTSQVKELTAA 213 >UniRef50_UPI00015B4A62 Cluster: PREDICTED: similar to nuclear receptor; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to nuclear receptor - Nasonia vitripennis Length = 427 Score = 41.5 bits (93), Expect = 0.016 Identities = 19/38 (50%), Positives = 24/38 (63%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM 458 N+CQ CR +KC+ V M RDAV+ R P R +AAM Sbjct: 61 NQCQACRFRKCLQVNMKRDAVQHERAP-RSATTSMAAM 97 >UniRef50_UPI0000DB771B Cluster: PREDICTED: similar to Hormone receptor-like in 38 CG1864-PB, isoform B; n=3; Apis mellifera|Rep: PREDICTED: similar to Hormone receptor-like in 38 CG1864-PB, isoform B - Apis mellifera Length = 787 Score = 41.5 bits (93), Expect = 0.016 Identities = 25/72 (34%), Positives = 38/72 (52%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 NRCQ+CR +KC+ VGM ++ VR + K + R+ S E ++ + Sbjct: 503 NRCQFCRFQKCLMVGMVKEVVRTDSL-KGRRGRL-----PSKPKSPQESPPSSPVS---- 552 Query: 525 LLARVVRAHLDT 560 L+ +VRAHLDT Sbjct: 553 LITALVRAHLDT 564 >UniRef50_Q98ST8 Cluster: Ff1c; n=6; Clupeocephala|Rep: Ff1c - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 537 Score = 41.5 bits (93), Expect = 0.016 Identities = 19/48 (39%), Positives = 28/48 (58%) Frame = +3 Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRV 422 N+RY A+ ++ RC YCR +KC+AVGM ++AVR R+ Sbjct: 82 NKRYTCAEAQNCPMDLAQR---KRCPYCRFQKCVAVGMKKEAVRADRM 126 >UniRef50_Q7ZZY9 Cluster: Vitamin D receptor; n=1; Petromyzon marinus|Rep: Vitamin D receptor - Petromyzon marinus (Sea lamprey) Length = 406 Score = 41.5 bits (93), Expect = 0.016 Identities = 21/70 (30%), Positives = 36/70 (51%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530 CQ CRLK+C +GM ++ + +R+K I+ + S+ H L++ RL+ Sbjct: 79 CQACRLKRCRDIGMMKELIMTEEEVQRKKEIIMKRKLEDSAREVHTPQL---LEEQERLI 135 Query: 531 ARVVRAHLDT 560 A ++ AH T Sbjct: 136 ATLIEAHRKT 145 >UniRef50_Q4SD43 Cluster: Chromosome 1 SCAF14643, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 1 SCAF14643, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 350 Score = 41.5 bits (93), Expect = 0.016 Identities = 15/19 (78%), Positives = 19/19 (100%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRD 401 NRCQ+CRL+KC+A+GMSRD Sbjct: 60 NRCQHCRLQKCLALGMSRD 78 >UniRef50_Q49MA6 Cluster: Nuclear receptor 2DBD-gamma; n=3; Bilateria|Rep: Nuclear receptor 2DBD-gamma - Schistosoma mansoni (Blood fluke) Length = 1861 Score = 41.5 bits (93), Expect = 0.016 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = +3 Query: 306 RRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476 R + +G T N C+ CR ++C+AVGMS+ AV P K R ++Q S+ Sbjct: 518 RNGGNCAVTGATRNNCKSCRYRRCLAVGMSKHAVVSALQPNAIKHRCAVEIEQIRSA 574 >UniRef50_Q1RPY8 Cluster: Nuclear receptor; n=2; Ciona intestinalis|Rep: Nuclear receptor - Ciona intestinalis (Transparent sea squirt) Length = 692 Score = 41.5 bits (93), Expect = 0.016 Identities = 15/31 (48%), Positives = 22/31 (70%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 NRCQYCR +KC+ +GM D+V+ R P ++ Sbjct: 256 NRCQYCRFQKCVLMGMKSDSVQCERSPMHKQ 286 >UniRef50_Q92570 Cluster: Orphan nuclear receptor NR4A3; n=26; Euteleostomi|Rep: Orphan nuclear receptor NR4A3 - Homo sapiens (Human) Length = 626 Score = 41.5 bits (93), Expect = 0.016 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470 NRCQYCR +KC++VGM ++ VR GR+P + K+ + Q S Sbjct: 342 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 390 >UniRef50_Q9Y466 Cluster: Orphan nuclear receptor NR2E1; n=38; Eumetazoa|Rep: Orphan nuclear receptor NR2E1 - Homo sapiens (Human) Length = 385 Score = 41.5 bits (93), Expect = 0.016 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500 N+C+ CRLKKC+ V M++DAV+ R P+ R A+ ++ + + AH +AA Sbjct: 68 NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 124 >UniRef50_P15370 Cluster: Protein embryonic gonad; n=2; Sophophora|Rep: Protein embryonic gonad - Drosophila melanogaster (Fruit fly) Length = 373 Score = 41.5 bits (93), Expect = 0.016 Identities = 22/69 (31%), Positives = 31/69 (44%) Frame = +3 Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446 G YN + V + C+ CRL+KC+ VGMS+ R+GR K Sbjct: 30 GRTYNNIAAIAGCKHNGDCVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHC 89 Query: 447 LAAMQQSSS 473 L QQ++S Sbjct: 90 LLQEQQTTS 98 >UniRef50_UPI0000E47369 Cluster: PREDICTED: similar to ROR-alpha 1, partial; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to ROR-alpha 1, partial - Strongylocentrotus purpuratus Length = 497 Score = 36.7 bits (81), Expect(2) = 0.018 Identities = 13/16 (81%), Positives = 15/16 (93%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGM 392 NRCQ+CR KKC+AVGM Sbjct: 90 NRCQHCRFKKCLAVGM 105 Score = 23.8 bits (49), Expect(2) = 0.018 Identities = 9/13 (69%), Positives = 12/13 (92%) Frame = +3 Query: 399 DAVRFGRVPKREK 437 +AVR+GRVP+R K Sbjct: 140 EAVRYGRVPQRGK 152 >UniRef50_Q7PUT9 Cluster: ENSANGP00000017626; n=12; Endopterygota|Rep: ENSANGP00000017626 - Anopheles gambiae str. PEST Length = 485 Score = 41.1 bits (92), Expect = 0.021 Identities = 15/22 (68%), Positives = 19/22 (86%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 NRCQYCR +KC+A GM R+AV+ Sbjct: 186 NRCQYCRYQKCLACGMKREAVQ 207 >UniRef50_A0NCV2 Cluster: ENSANGP00000031834; n=2; Culicidae|Rep: ENSANGP00000031834 - Anopheles gambiae str. PEST Length = 98 Score = 41.1 bits (92), Expect = 0.021 Identities = 20/69 (28%), Positives = 31/69 (44%) Frame = +3 Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446 G YN + + + + C+ CRL+KC+ VGMS+ R+GR K Sbjct: 30 GRSYNNLSSISECKNNGECIINKKNRTACKACRLRKCLMVGMSKSGSRYGRRSNWFKIHC 89 Query: 447 LAAMQQSSS 473 L QQ ++ Sbjct: 90 LLQEQQQAA 98 >UniRef50_P10827 Cluster: Thyroid hormone receptor alpha; n=186; root|Rep: Thyroid hormone receptor alpha - Homo sapiens (Human) Length = 490 Score = 41.1 bits (92), Expect = 0.021 Identities = 18/31 (58%), Positives = 21/31 (67%) Frame = +3 Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407 S V +T N+CQ CR KKCIAVGM+ D V Sbjct: 95 SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125 >UniRef50_Q9N4B8 Cluster: Nuclear hormone receptor family member nhr-41; n=5; Caenorhabditis|Rep: Nuclear hormone receptor family member nhr-41 - Caenorhabditis elegans Length = 615 Score = 41.1 bits (92), Expect = 0.021 Identities = 15/27 (55%), Positives = 22/27 (81%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 NRCQYCRL+KC+++GM ++V+ R P Sbjct: 202 NRCQYCRLRKCLSMGMRSESVQAERRP 228 >UniRef50_UPI0000F1FFCD Cluster: PREDICTED: neural orphan nuclear receptor NOR1 isoform 1; n=1; Danio rerio|Rep: PREDICTED: neural orphan nuclear receptor NOR1 isoform 1 - Danio rerio Length = 575 Score = 40.7 bits (91), Expect = 0.028 Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 7/39 (17%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440 NRCQYCR +KC++VGM ++ VR GR+P + K+ Sbjct: 305 NRCQYCRFQKCLSVGMVKEVVRTDNLKGRRGRLPSKPKS 343 >UniRef50_UPI0000D55997 Cluster: PREDICTED: similar to Knirps-related protein, partial; n=1; Tribolium castaneum|Rep: PREDICTED: similar to Knirps-related protein, partial - Tribolium castaneum Length = 330 Score = 40.7 bits (91), Expect = 0.028 Identities = 21/66 (31%), Positives = 29/66 (43%) Frame = +3 Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446 G YN + + V + C+ CRL+KC+ VGMS+ R+GR K Sbjct: 30 GRSYNNLSSISECKNNGECVINKKNRTACKACRLRKCLMVGMSKSGSRYGRRSNWFKIHC 89 Query: 447 LAAMQQ 464 L QQ Sbjct: 90 LLQEQQ 95 >UniRef50_UPI0000D556F1 Cluster: PREDICTED: similar to CG9019-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG9019-PA - Tribolium castaneum Length = 483 Score = 40.7 bits (91), Expect = 0.028 Identities = 17/47 (36%), Positives = 26/47 (55%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH 485 N+C+ CRL KC M++DAV+ R P++ K + + Q S H Sbjct: 89 NQCRACRLSKCFQASMNKDAVQHERGPRKPKLQASSNQQMQPSPVGH 135 >UniRef50_UPI0000584A1E Cluster: PREDICTED: similar to nuclear receptor AmNR2; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to nuclear receptor AmNR2 - Strongylocentrotus purpuratus Length = 448 Score = 40.7 bits (91), Expect = 0.028 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 N CQ+CR +KC+ GM DAVR R+P Sbjct: 119 NSCQFCRFQKCLTAGMKTDAVREDRLP 145 >UniRef50_UPI000051A1CD Cluster: PREDICTED: similar to Knirps-related protein; n=1; Apis mellifera|Rep: PREDICTED: similar to Knirps-related protein - Apis mellifera Length = 420 Score = 40.7 bits (91), Expect = 0.028 Identities = 21/74 (28%), Positives = 31/74 (41%) Frame = +3 Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446 G YN + + V + C+ CRL+KC+ VGMS+ R+GR K Sbjct: 30 GRSYNNLSSISECKNGGECVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHC 89 Query: 447 LAAMQQSSSSRAHE 488 L QQ + + Sbjct: 90 LLQEQQQQQQQQQQ 103 >UniRef50_Q4RI46 Cluster: Chromosome 8 SCAF15044, whole genome shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 8 SCAF15044, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 650 Score = 40.7 bits (91), Expect = 0.028 Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 7/39 (17%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440 NRCQYCR +KC++VGM ++ VR GR+P + K+ Sbjct: 338 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKS 376 >UniRef50_Q2M0D5 Cluster: GA17924-PA; n=1; Drosophila pseudoobscura|Rep: GA17924-PA - Drosophila pseudoobscura (Fruit fly) Length = 803 Score = 40.7 bits (91), Expect = 0.028 Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 10/49 (20%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVR----------FGRVPKREKARILAAMQQ 464 RC YCR +KC+ VGM +AVR FG + KR++AR L M+Q Sbjct: 390 RCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQ 438 >UniRef50_O96562 Cluster: Retinoic acid X receptor; n=1; Tripedalia cystophora|Rep: Retinoic acid X receptor - Tripedalia cystophora (Jellyfish) Length = 435 Score = 40.7 bits (91), Expect = 0.028 Identities = 16/31 (51%), Positives = 21/31 (67%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 NRCQYCR +KC+ VGM +AV+ + K K Sbjct: 156 NRCQYCRFQKCVQVGMKPEAVQDETLKKERK 186 >UniRef50_Q20765 Cluster: Nuclear hormone receptor family member nhr-7; n=2; Caenorhabditis|Rep: Nuclear hormone receptor family member nhr-7 - Caenorhabditis elegans Length = 536 Score = 40.7 bits (91), Expect = 0.028 Identities = 18/50 (36%), Positives = 29/50 (58%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494 N C+YCR +KC+ VGM+ D VR R ++ +L+ + S S ++ A Sbjct: 60 NACRYCRFRKCLLVGMNPDYVRPDREKSKKGKTVLSKKKSVSRSLSYRLA 109 >UniRef50_O45666 Cluster: Nuclear hormone receptor family member nhr-49; n=5; Caenorhabditis|Rep: Nuclear hormone receptor family member nhr-49 - Caenorhabditis elegans Length = 501 Score = 40.7 bits (91), Expect = 0.028 Identities = 14/25 (56%), Positives = 20/25 (80%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425 C+YCR +KC+ VGM R+A++F R P Sbjct: 87 CRYCRFQKCVQVGMKREAIQFERDP 111 >UniRef50_P33244 Cluster: Nuclear hormone receptor FTZ-F1; n=4; Coelomata|Rep: Nuclear hormone receptor FTZ-F1 - Drosophila melanogaster (Fruit fly) Length = 1027 Score = 40.7 bits (91), Expect = 0.028 Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 10/49 (20%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVR----------FGRVPKREKARILAAMQQ 464 RC YCR +KC+ VGM +AVR FG + KR++AR L M+Q Sbjct: 559 RCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQ 607 >UniRef50_UPI0000E4A84F Cluster: PREDICTED: similar to retinoic X receptor-like protein, partial; n=3; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to retinoic X receptor-like protein, partial - Strongylocentrotus purpuratus Length = 308 Score = 40.3 bits (90), Expect = 0.037 Identities = 16/28 (57%), Positives = 21/28 (75%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK 428 NRCQYCR +KC+ +GM R+AV+ R K Sbjct: 183 NRCQYCRYQKCLGMGMRREAVQEERQRK 210 >UniRef50_Q90Y24 Cluster: Thyroid hormone receptor alpha small isoform; n=4; Euteleostomi|Rep: Thyroid hormone receptor alpha small isoform - Oreochromis niloticus (Nile tilapia) (Tilapia nilotica) Length = 241 Score = 40.3 bits (90), Expect = 0.037 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +3 Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV 407 +T N+CQ CR KKCIAVGM+ D V Sbjct: 24 ITRNQCQLCRFKKCIAVGMAMDLV 47 >UniRef50_Q4RI90 Cluster: Chromosome 8 SCAF15044, whole genome shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 8 SCAF15044, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 503 Score = 40.3 bits (90), Expect = 0.037 Identities = 15/19 (78%), Positives = 18/19 (94%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRD 401 NRCQ+CRL+KC+A GMSRD Sbjct: 58 NRCQHCRLQKCLAQGMSRD 76 >UniRef50_Q9NB03 Cluster: Nuclear receptor FTZ-F1 protein; n=2; Aedes aegypti|Rep: Nuclear receptor FTZ-F1 protein - Aedes aegypti (Yellowfever mosquito) Length = 840 Score = 40.3 bits (90), Expect = 0.037 Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 10/49 (20%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVR----------FGRVPKREKARILAAMQQ 464 RC YCR +KC+ VGM +AVR FG + KR++AR L M+Q Sbjct: 388 RCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQIMRQ 436 >UniRef50_Q4H333 Cluster: Nuclear receptor; n=2; Coelomata|Rep: Nuclear receptor - Ciona intestinalis (Transparent sea squirt) Length = 1054 Score = 40.3 bits (90), Expect = 0.037 Identities = 24/72 (33%), Positives = 36/72 (50%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 NRCQ+CR +KC+AVGM ++ VR + K + R+ S + A Sbjct: 765 NRCQFCRFEKCLAVGMVKEVVRTDHL-KGRRGRL-------PSKPKGPKDPVAPPSPPVS 816 Query: 525 LLARVVRAHLDT 560 + +VRAH+DT Sbjct: 817 FITSLVRAHVDT 828 >UniRef50_Q3I5Q0 Cluster: RXRc nuclear hormone receptor; n=4; Decapoda|Rep: RXRc nuclear hormone receptor - Gecarcinus lateralis (Blackback land crab) Length = 363 Score = 40.3 bits (90), Expect = 0.037 Identities = 14/22 (63%), Positives = 19/22 (86%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 NRCQYCR +KC+ +GM R+AV+ Sbjct: 122 NRCQYCRYQKCLTMGMKREAVQ 143 >UniRef50_UPI0000E460D2 Cluster: PREDICTED: similar to orphan nuclear hormone receptor; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to orphan nuclear hormone receptor - Strongylocentrotus purpuratus Length = 723 Score = 39.9 bits (89), Expect = 0.049 Identities = 24/71 (33%), Positives = 36/71 (50%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 NRCQYCR +KC+A GM ++ VR + R + L Q++S + Sbjct: 438 NRCQYCRFQKCLACGMVKEVVRTDNL--RGRRGRLPTKQRNSQDLPPPSPPVS------- 488 Query: 525 LLARVVRAHLD 557 L+ +VRAH+D Sbjct: 489 LITALVRAHVD 499 >UniRef50_UPI0000DB6F53 Cluster: PREDICTED: similar to nuclear receptor subfamily 2, group E, member 1; n=1; Apis mellifera|Rep: PREDICTED: similar to nuclear receptor subfamily 2, group E, member 1 - Apis mellifera Length = 418 Score = 39.9 bits (89), Expect = 0.049 Identities = 16/33 (48%), Positives = 22/33 (66%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443 N+C+ CRL KCI GM++DAV+ R P+ R Sbjct: 101 NQCRACRLAKCIQAGMNKDAVQHERGPRNSTLR 133 >UniRef50_Q9Y1J4 Cluster: Retinoid X receptor RXR-2; n=10; Bilateria|Rep: Retinoid X receptor RXR-2 - Schistosoma mansoni (Blood fluke) Length = 1501 Score = 39.9 bits (89), Expect = 0.049 Identities = 17/41 (41%), Positives = 29/41 (70%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS 467 NRCQYCR +KC+ GM R+AV+ +R++ ++ + +Q+S Sbjct: 965 NRCQYCRYQKCLRAGMRREAVQ----EERQQQQLQSEVQRS 1001 >UniRef50_Q9Y0D1 Cluster: Fushi tarazu-factor 1; n=4; Pancrustacea|Rep: Fushi tarazu-factor 1 - Metapenaeus ensis (Greasyback shrimp) (Sand shrimp) Length = 545 Score = 39.9 bits (89), Expect = 0.049 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 10/54 (18%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVR----------FGRVPKREKARILAAMQQSSSSR 479 RC YCR +KC+ VGM +AVR FG + KR++AR L ++Q S+ Sbjct: 84 RCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQLLRQRQLSQ 137 >UniRef50_Q8ST32 Cluster: Nuclear receptor RXR; n=1; Dirofilaria immitis|Rep: Nuclear receptor RXR - Dirofilaria immitis (Canine heartworm) Length = 474 Score = 39.9 bits (89), Expect = 0.049 Identities = 16/29 (55%), Positives = 21/29 (72%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431 NRCQYCR +KC ++GM R+AV+ R R Sbjct: 179 NRCQYCRYRKCQSMGMKREAVQEERQSSR 207 >UniRef50_Q2TUU9 Cluster: Two-DBD-nuclear receptor; n=3; Schistosoma mansoni|Rep: Two-DBD-nuclear receptor - Schistosoma mansoni (Blood fluke) Length = 1527 Score = 39.9 bits (89), Expect = 0.049 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497 N C+ CR ++C+A GMS+ R GR P K ++Q + R + ++ Sbjct: 618 NACKSCRFRRCLAAGMSKKGSRIGRQPNAVKFHCAIEIKQLQAIRGNSSSS 668 >UniRef50_Q4SGI3 Cluster: Chromosome undetermined SCAF14594, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome undetermined SCAF14594, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 404 Score = 39.5 bits (88), Expect = 0.065 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +3 Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV 407 +T N+CQ CR KKCIAVGM+ D V Sbjct: 63 VTRNQCQECRFKKCIAVGMATDLV 86 >UniRef50_A7RX15 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 351 Score = 39.5 bits (88), Expect = 0.065 Identities = 16/27 (59%), Positives = 19/27 (70%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPK 428 +CQ CR KKC VGM R+A+R GR K Sbjct: 73 QCQACRFKKCATVGMRREAIRRGRPTK 99 >UniRef50_P20153 Cluster: Protein ultraspiracle; n=6; Schizophora|Rep: Protein ultraspiracle - Drosophila melanogaster (Fruit fly) Length = 508 Score = 39.5 bits (88), Expect = 0.065 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 NRCQYCR +KC+ GM R+AV+ Sbjct: 154 NRCQYCRYQKCLTCGMKREAVQ 175 >UniRef50_Q9U2R6 Cluster: Nuclear hormone receptor family member nhr-91; n=5; Caenorhabditis|Rep: Nuclear hormone receptor family member nhr-91 - Caenorhabditis elegans Length = 474 Score = 39.5 bits (88), Expect = 0.065 Identities = 16/27 (59%), Positives = 20/27 (74%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 NRCQ CR +KCI+ GM +AVR R+P Sbjct: 150 NRCQSCRFRKCISKGMLTEAVREDRMP 176 >UniRef50_P41829 Cluster: Nuclear hormone receptor family member nhr-6; n=2; Caenorhabditis|Rep: Nuclear hormone receptor family member nhr-6 - Caenorhabditis elegans Length = 619 Score = 39.5 bits (88), Expect = 0.065 Identities = 15/29 (51%), Positives = 21/29 (72%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431 +RCQYCR +KC+ VGM ++ VR G + R Sbjct: 318 SRCQYCRYQKCLEVGMVKEIVRHGSLSGR 346 >UniRef50_UPI0000587672 Cluster: PREDICTED: similar to tailless; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to tailless - Strongylocentrotus purpuratus Length = 457 Score = 39.1 bits (87), Expect = 0.086 Identities = 15/43 (34%), Positives = 28/43 (65%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473 N+C+ CRL+KC M++DAV+ R P++ K + + ++ S+ Sbjct: 109 NQCRACRLRKCFEAQMNKDAVQHERGPRKPKNKPMVSIDARST 151 >UniRef50_Q49MV3 Cluster: Nuclear receptor 2DBD-beta; n=2; Schistosoma|Rep: Nuclear receptor 2DBD-beta - Schistosoma mansoni (Blood fluke) Length = 1523 Score = 39.1 bits (87), Expect = 0.086 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476 N C+ CR ++C+AVGMS+ R GR P K + Q ++S Sbjct: 224 NMCKSCRFQRCLAVGMSKTGSRIGRQPNTIKYYCAREISQLTNS 267 >UniRef50_P49869 Cluster: Probable nuclear hormone receptor HR38; n=19; Coelomata|Rep: Probable nuclear hormone receptor HR38 - Drosophila melanogaster (Fruit fly) Length = 1073 Score = 39.1 bits (87), Expect = 0.086 Identities = 23/72 (31%), Positives = 37/72 (51%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 NRCQ+CR +KC+ VGM ++ VR + K + R+ S E + + Sbjct: 794 NRCQFCRFQKCLVVGMVKEVVRTDSL-KGRRGRL-----PSKPKSPQESPPSPPIS---- 843 Query: 525 LLARVVRAHLDT 560 L+ +VR+H+DT Sbjct: 844 LITALVRSHVDT 855 >UniRef50_O42554 Cluster: ReverbB; n=2; Danio rerio|Rep: ReverbB - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 43 Score = 38.7 bits (86), Expect = 0.11 Identities = 15/20 (75%), Positives = 16/20 (80%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDA 404 NRCQ CR KKC+ VGMS DA Sbjct: 24 NRCQQCRFKKCLLVGMSSDA 43 Score = 37.5 bits (83), Expect = 0.26 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = +2 Query: 275 IQQKIQYRPCTKNQQCSILRINR 343 +QQ IQY+ C KN+ C I+RINR Sbjct: 1 MQQNIQYKKCLKNESCPIMRINR 23 >UniRef50_O45117 Cluster: Ultraspiracle; n=3; Endopterygota|Rep: Ultraspiracle - Chironomus tentans (Midge) Length = 552 Score = 38.7 bits (86), Expect = 0.11 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 NRCQYCR +KC+ GM R+AV+ Sbjct: 247 NRCQYCRYQKCLNCGMKREAVQ 268 >UniRef50_Q8T7Y2 Cluster: Nuclear orphan receptor; n=1; Bombyx mori|Rep: Nuclear orphan receptor - Bombyx mori (Silk moth) Length = 461 Score = 38.3 bits (85), Expect = 0.15 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRD 401 NRCQYCRL+KC+A GM D Sbjct: 73 NRCQYCRLQKCLACGMRSD 91 >UniRef50_O77154 Cluster: Nuclear receptor 1; n=2; Ciona intestinalis|Rep: Nuclear receptor 1 - Ciona intestinalis (Transparent sea squirt) Length = 587 Score = 38.3 bits (85), Expect = 0.15 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAV--RFGRVPKR---EKARILAAMQQSSSSRAHEQAAAAEL 509 N+CQ CR +KCIA GM+ D V R+ KR E+ R L + S + Sbjct: 96 NQCQMCRYEKCIATGMATDLVLNEDKRIAKRKLIERNRQLRRHKDISHVMGTWKVGRGS- 154 Query: 510 DDAPRLLARVVRAHLD 557 DD +++ VV+AH D Sbjct: 155 DDDNHVISAVVQAHND 170 >UniRef50_A7J001 Cluster: Rxr1; n=1; Oikopleura dioica|Rep: Rxr1 - Oikopleura dioica (Tunicate) Length = 239 Score = 38.3 bits (85), Expect = 0.15 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 NRCQYCR +KC+ GM ++AV+ Sbjct: 44 NRCQYCRYQKCLLAGMKKEAVQ 65 >UniRef50_O17611 Cluster: Nuclear hormone receptor family member nhr-100; n=2; Caenorhabditis elegans|Rep: Nuclear hormone receptor family member nhr-100 - Caenorhabditis elegans Length = 437 Score = 38.3 bits (85), Expect = 0.15 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK 428 NRC+ CRLK+C+ VGM +AVR R K Sbjct: 74 NRCRACRLKRCLHVGMDANAVRSERTRK 101 >UniRef50_P10734 Cluster: Zygotic gap protein knirps; n=10; Schizophora|Rep: Zygotic gap protein knirps - Drosophila melanogaster (Fruit fly) Length = 429 Score = 38.3 bits (85), Expect = 0.15 Identities = 25/79 (31%), Positives = 35/79 (44%) Frame = +3 Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446 G YN + + C+ CRL+KC VGMS+ R+GR + +I Sbjct: 30 GRSYNNISTISECKNEGKCIIDKKNRTTCKACRLRKCYNVGMSKGGSRYGR--RSNWFKI 87 Query: 447 LAAMQQSSSSRAHEQAAAA 503 +Q+ HEQAAAA Sbjct: 88 HCLLQE------HEQAAAA 100 >UniRef50_P49867 Cluster: Nuclear hormone receptor FTZ-F1; n=4; Endopterygota|Rep: Nuclear hormone receptor FTZ-F1 - Bombyx mori (Silk moth) Length = 534 Score = 38.3 bits (85), Expect = 0.15 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 10/49 (20%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVR----------FGRVPKREKARILAAMQQ 464 RC +CR +KC+ VGM +AVR FG + KR++AR L M+Q Sbjct: 140 RCPFCRFQKCLDVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQMMRQ 188 >UniRef50_UPI00015B6336 Cluster: PREDICTED: similar to zinc finger transcription factor; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to zinc finger transcription factor - Nasonia vitripennis Length = 341 Score = 37.9 bits (84), Expect = 0.20 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = +3 Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419 G YN + + V + C+ CRL+KC+ VGMS+ R+GR Sbjct: 30 GRTYNNLGSISECKNGGVCVINKKNRTACKACRLRKCLMVGMSKSGSRYGR 80 >UniRef50_UPI0000F21183 Cluster: PREDICTED: similar to Hnf4a protein; n=1; Danio rerio|Rep: PREDICTED: similar to Hnf4a protein - Danio rerio Length = 488 Score = 37.9 bits (84), Expect = 0.20 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 N+C+YCRLKKC GM ++AV+ Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131 >UniRef50_UPI0000DB74D6 Cluster: PREDICTED: similar to nuclear receptor subfamily 2, group E, member 1; n=1; Apis mellifera|Rep: PREDICTED: similar to nuclear receptor subfamily 2, group E, member 1 - Apis mellifera Length = 351 Score = 37.9 bits (84), Expect = 0.20 Identities = 19/36 (52%), Positives = 23/36 (63%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452 N C YCRLKKC VGM+ AV+ R P R + +I A Sbjct: 62 NWCPYCRLKKCFTVGMNTAAVQEERGP-RVRTKIAA 96 >UniRef50_UPI0000DB7437 Cluster: PREDICTED: similar to Knirps-related protein; n=1; Apis mellifera|Rep: PREDICTED: similar to Knirps-related protein - Apis mellifera Length = 422 Score = 37.9 bits (84), Expect = 0.20 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = +3 Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419 G YN + + V + C+ CRL+KC+ VGMS+ R+GR Sbjct: 30 GRTYNNLGSISECKNGGVCVINKKNRTACKACRLRKCLMVGMSKSGSRYGR 80 >UniRef50_UPI0000DB7436 Cluster: PREDICTED: similar to Knirps-related protein; n=1; Apis mellifera|Rep: PREDICTED: similar to Knirps-related protein - Apis mellifera Length = 423 Score = 37.9 bits (84), Expect = 0.20 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = +3 Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419 G YN + + V + C+ CRL+KC+ VGMS+ R+GR Sbjct: 81 GRTYNNLGSISECKNGGVCVINKKNRTACKACRLRKCLMVGMSKSGSRYGR 131 >UniRef50_Q5RZV7 Cluster: Thyroid hormone receptor beta; n=7; Euteleostomi|Rep: Thyroid hormone receptor beta - Pseudopleuronectes americanus (Winter flounder) (Pleuronectesamericanus) Length = 415 Score = 37.9 bits (84), Expect = 0.20 Identities = 15/24 (62%), Positives = 18/24 (75%) Frame = +3 Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV 407 +T N+CQ CR KKCI VGM+ D V Sbjct: 81 VTRNQCQECRFKKCIVVGMATDLV 104 >UniRef50_Q8MXH2 Cluster: Nuclear hormone receptor family protein 66, isoform c; n=10; Caenorhabditis|Rep: Nuclear hormone receptor family protein 66, isoform c - Caenorhabditis elegans Length = 733 Score = 37.9 bits (84), Expect = 0.20 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = +3 Query: 318 SVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419 +VV G G +C+ CR +KCI+ GM +++V+ R Sbjct: 312 TVVKDGSAGQKCRACRFRKCISSGMDKNSVQHRR 345 >UniRef50_Q91766 Cluster: Hepatocyte nuclear factor 4-alpha; n=5; Euteleostomi|Rep: Hepatocyte nuclear factor 4-alpha - Xenopus laevis (African clawed frog) Length = 464 Score = 37.9 bits (84), Expect = 0.20 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 N+C+YCRLKKC GM ++AV+ Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131 >UniRef50_P49698 Cluster: Hepatocyte nuclear factor 4-alpha; n=41; Eumetazoa|Rep: Hepatocyte nuclear factor 4-alpha - Mus musculus (Mouse) Length = 474 Score = 37.9 bits (84), Expect = 0.20 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 N+C+YCRLKKC GM ++AV+ Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131 >UniRef50_P41235 Cluster: Hepatocyte nuclear factor 4-alpha; n=63; Chordata|Rep: Hepatocyte nuclear factor 4-alpha - Homo sapiens (Human) Length = 474 Score = 37.9 bits (84), Expect = 0.20 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 N+C+YCRLKKC GM ++AV+ Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131 >UniRef50_Q2TUT9 Cluster: Nuclear hormone receptor 4A4-like protein; n=3; Schistosoma|Rep: Nuclear hormone receptor 4A4-like protein - Schistosoma mansoni (Blood fluke) Length = 592 Score = 37.5 bits (83), Expect = 0.26 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 NRC YCR +KC+ VGM ++ VR Sbjct: 153 NRCHYCRFQKCLKVGMVKEVVR 174 >UniRef50_O61228 Cluster: Thr4 protein; n=2; Tenebrionidae|Rep: Thr4 protein - Tenebrio molitor (Yellow mealworm) Length = 810 Score = 37.5 bits (83), Expect = 0.26 Identities = 16/26 (61%), Positives = 17/26 (65%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVP 425 RC YCR KKCI GM AVR R+P Sbjct: 451 RCPYCRFKKCIEQGMVLQAVREDRMP 476 >UniRef50_O16890 Cluster: Nuclear hormone receptor family protein 118; n=2; Caenorhabditis elegans|Rep: Nuclear hormone receptor family protein 118 - Caenorhabditis elegans Length = 231 Score = 37.5 bits (83), Expect = 0.26 Identities = 24/93 (25%), Positives = 43/93 (46%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 NRC+ CRL+KC GM A+R R ++ + + + + + + A L Sbjct: 67 NRCRACRLEKCFRAGMDASAIRNKRAKRKSQPESPCTEEIENRALSWQTEAIIAL----- 121 Query: 525 LLARVVRAHLDTCEFHA*SRRFHASQSFVTVPT 623 L+ + + H +F S +++SFVT+ T Sbjct: 122 LMQKNGQTHNKLSQFSGASEFNFSTRSFVTLET 154 Score = 34.7 bits (76), Expect = 1.9 Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Frame = +2 Query: 218 VERDSTKCSCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNE 394 ++R SC+ +GFFRRSI +K Y+ C+ + QCSI R EK R + Sbjct: 25 IQRHYGTVSCNGCKGFFRRSIWEKRTYK-CSFHNQCSIEHKYRNRCRACRLEKCFRAGMD 83 Query: 395 QRCCAIRSCTQTRESAYPRSDAT 463 AIR+ R+S P S T Sbjct: 84 --ASAIRNKRAKRKS-QPESPCT 103 >UniRef50_O00482 Cluster: Orphan nuclear receptor NR5A2; n=68; Deuterostomia|Rep: Orphan nuclear receptor NR5A2 - Homo sapiens (Human) Length = 541 Score = 37.5 bits (83), Expect = 0.26 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422 RC YCR +KC++VGM +AVR R+ Sbjct: 137 RCPYCRFQKCLSVGMKLEAVRADRM 161 Score = 32.3 bits (70), Expect = 9.9 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373 +GFF+R++Q +Y C +NQ C I + R+ P +K Sbjct: 107 KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 145 >UniRef50_Q4RQL5 Cluster: Chromosome 2 SCAF15004, whole genome shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 2 SCAF15004, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 636 Score = 37.1 bits (82), Expect = 0.35 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 NRCQ+CR +KC+ VGM R+ R Sbjct: 315 NRCQFCRFQKCLVVGMVREGKR 336 >UniRef50_Q9GUI3 Cluster: Nuclear hormone receptor family protein 114, isoform a; n=5; Caenorhabditis|Rep: Nuclear hormone receptor family protein 114, isoform a - Caenorhabditis elegans Length = 418 Score = 37.1 bits (82), Expect = 0.35 Identities = 13/25 (52%), Positives = 20/25 (80%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425 C+YCR +KC++VGM R+A++ R P Sbjct: 67 CRYCRFEKCLSVGMDRNALQQNRDP 91 >UniRef50_Q23038 Cluster: Putative uncharacterized protein; n=1; Caenorhabditis elegans|Rep: Putative uncharacterized protein - Caenorhabditis elegans Length = 427 Score = 37.1 bits (82), Expect = 0.35 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR 419 N C+ CR KKCIAVGM+ D V++ R Sbjct: 112 NVCRDCRYKKCIAVGMTTDNVQYNR 136 >UniRef50_A7L5U9 Cluster: Thyroid hormone receptor; n=2; Branchiostoma|Rep: Thyroid hormone receptor - Branchiostoma floridae (Florida lancelet) (Amphioxus) Length = 431 Score = 37.1 bits (82), Expect = 0.35 Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 2/34 (5%) Frame = +3 Query: 339 TGNRCQYCRLKKCIAVGMSRDAV--RFGRVPKRE 434 T N+CQ CR KKC+ VGM+ D V RV KR+ Sbjct: 102 TRNQCQECRFKKCVRVGMATDLVLDEQKRVAKRK 135 >UniRef50_Q17771 Cluster: Nuclear hormone receptor family member nhr-35; n=4; Caenorhabditis|Rep: Nuclear hormone receptor family member nhr-35 - Caenorhabditis elegans Length = 542 Score = 37.1 bits (82), Expect = 0.35 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGR--VPKREKARILAAMQQSSSSRAHEQAAAAELDDA-P 521 C+YCR KCI+ GM D V+ R + KREK + Q + R + + ++D Sbjct: 129 CRYCRFMKCISSGMRDDQVQSERDVIGKREKKDNMKTYCQDPTPRTSPELTMSPVEDEYD 188 Query: 522 RLLARVVRAHL 554 +LL ++++ + Sbjct: 189 QLLESLLKSEM 199 >UniRef50_UPI0000E4834A Cluster: PREDICTED: similar to hormone receptor beta subunit; TRbeta1; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to hormone receptor beta subunit; TRbeta1 - Strongylocentrotus purpuratus Length = 423 Score = 36.7 bits (81), Expect = 0.46 Identities = 20/51 (39%), Positives = 28/51 (54%) Frame = +3 Query: 339 TGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491 T N+CQ CR KKC+ VGM+ D V K ++A I Q++ R E+ Sbjct: 125 TRNQCQQCRYKKCLNVGMAPDLVLNESQRKAKRALI----QENREKRGREE 171 >UniRef50_Q7QCB4 Cluster: ENSANGP00000002992; n=1; Anopheles gambiae str. PEST|Rep: ENSANGP00000002992 - Anopheles gambiae str. PEST Length = 284 Score = 36.7 bits (81), Expect = 0.46 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446 N+CQ+CRL+KC+ +GM R+ R + +R+ Sbjct: 31 NQCQFCRLRKCLKMGMRREVSRTNSSSTNKTSRL 64 >UniRef50_A7SBF2 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 378 Score = 36.7 bits (81), Expect = 0.46 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 NRCQ CR KC+ GM ++AV+ R P Sbjct: 63 NRCQKCRFVKCLTAGMKKEAVQCERKP 89 >UniRef50_P79926 Cluster: Hepatocyte nuclear factor 4-beta; n=7; Euteleostomi|Rep: Hepatocyte nuclear factor 4-beta - Xenopus laevis (African clawed frog) Length = 446 Score = 36.7 bits (81), Expect = 0.46 Identities = 12/22 (54%), Positives = 18/22 (81%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 N+C+YCRL+KC GM ++AV+ Sbjct: 100 NQCRYCRLRKCFRAGMKKEAVQ 121 >UniRef50_UPI000155BF1B Cluster: PREDICTED: similar to hepatocyte nuclear factor 4, gamma; n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to hepatocyte nuclear factor 4, gamma - Ornithorhynchus anatinus Length = 470 Score = 36.3 bits (80), Expect = 0.61 Identities = 12/22 (54%), Positives = 18/22 (81%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 N+C++CRLKKC GM ++AV+ Sbjct: 115 NQCRFCRLKKCFRAGMKKEAVQ 136 >UniRef50_UPI00015A41AD Cluster: UPI00015A41AD related cluster; n=1; Danio rerio|Rep: UPI00015A41AD UniRef100 entry - Danio rerio Length = 468 Score = 36.3 bits (80), Expect = 0.61 Identities = 12/22 (54%), Positives = 18/22 (81%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 N+C+YCRL+KC GM ++AV+ Sbjct: 113 NQCRYCRLRKCFRAGMRKEAVQ 134 >UniRef50_Q966H7 Cluster: Putative uncharacterized protein; n=3; Caenorhabditis elegans|Rep: Putative uncharacterized protein - Caenorhabditis elegans Length = 431 Score = 36.3 bits (80), Expect = 0.61 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQ 461 C+ CRL++C +GM D +F R P ++K + AA++ Sbjct: 87 CKKCRLQRCFDIGMKIDNFQFERDPYKQKLEMQAALK 123 >UniRef50_Q29PL1 Cluster: GA21482-PA; n=1; Drosophila pseudoobscura|Rep: GA21482-PA - Drosophila pseudoobscura (Fruit fly) Length = 658 Score = 36.3 bits (80), Expect = 0.61 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 N+C+ CRL KC M++DAV+ R P++ K Sbjct: 65 NQCRACRLAKCFQSAMNKDAVQHERGPRKPK 95 >UniRef50_Q17589 Cluster: Putative uncharacterized protein nhr-17; n=2; Caenorhabditis|Rep: Putative uncharacterized protein nhr-17 - Caenorhabditis elegans Length = 396 Score = 36.3 bits (80), Expect = 0.61 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS 467 C++CR KKCI GM R + R KR+K L ++S Sbjct: 83 CRHCRYKKCIIAGMDRGELSMERRRKRKKLNGLEGSEES 121 >UniRef50_O96680 Cluster: Dissatisfaction; n=2; Drosophila melanogaster|Rep: Dissatisfaction - Drosophila melanogaster (Fruit fly) Length = 693 Score = 36.3 bits (80), Expect = 0.61 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437 N+C+ CRL KC M++DAV+ R P++ K Sbjct: 67 NQCRACRLAKCFQSAMNKDAVQHERGPRKPK 97 >UniRef50_O45910 Cluster: Putative uncharacterized protein nhr-231; n=1; Caenorhabditis elegans|Rep: Putative uncharacterized protein nhr-231 - Caenorhabditis elegans Length = 397 Score = 36.3 bits (80), Expect = 0.61 Identities = 19/54 (35%), Positives = 28/54 (51%) Frame = +3 Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKA 440 NR+Y + S G C++CR KKCI +GM+ D VR + ++E A Sbjct: 48 NRKYKCA---QKSGKCDVGAEKATCKFCRYKKCIDLGMTTDNVRAEDITEQEPA 98 >UniRef50_O16884 Cluster: Putative uncharacterized protein; n=1; Caenorhabditis elegans|Rep: Putative uncharacterized protein - Caenorhabditis elegans Length = 391 Score = 36.3 bits (80), Expect = 0.61 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +3 Query: 306 RRTSSVVSSGLTGNRCQYCRLKKCI-AVGMSRDAVRFGRVPKREKARILAAMQQSSSSR 479 +R S +SS + C+ CR ++CI GMSRD V+ R KR +LA R Sbjct: 51 KRDSDCISSPELRSICRACRYQRCIDTAGMSRDLVQQRRSEKRTPKYVLALRNGGEDER 109 >UniRef50_A7MAD6 Cluster: PNR-like; n=2; Aedes aegypti|Rep: PNR-like - Aedes aegypti (Yellowfever mosquito) Length = 422 Score = 36.3 bits (80), Expect = 0.61 Identities = 20/53 (37%), Positives = 27/53 (50%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503 N+CQ CR KC+ M R+AV+ R P+ LAAM + S + A A Sbjct: 66 NQCQACRFAKCLQANMRREAVQHERAPR--NCAPLAAMNGINPSDFYPSRAFA 116 >UniRef50_Q9BJK5 Cluster: Nuclear hormone receptor family member nhr-97; n=3; Caenorhabditis|Rep: Nuclear hormone receptor family member nhr-97 - Caenorhabditis elegans Length = 439 Score = 36.3 bits (80), Expect = 0.61 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR-VPKREKAR 443 N C+YCR +C+ VGM +AV+ R + KR+K + Sbjct: 86 NACRYCRFHRCLFVGMKIEAVKMDRKLTKRKKEK 119 >UniRef50_Q17370 Cluster: Nuclear hormone receptor family member nhr-47; n=2; Caenorhabditis|Rep: Nuclear hormone receptor family member nhr-47 - Caenorhabditis elegans Length = 579 Score = 36.3 bits (80), Expect = 0.61 Identities = 12/23 (52%), Positives = 20/23 (86%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGR 419 C+YCRL+KC+AVGM +++++ R Sbjct: 63 CRYCRLQKCLAVGMDKNSIQNDR 85 >UniRef50_UPI00015B458D Cluster: PREDICTED: similar to GA10225-PA; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to GA10225-PA - Nasonia vitripennis Length = 1166 Score = 35.9 bits (79), Expect = 0.80 Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK-REKA 440 N C +CRLKKC AV M+ AV+ R P+ R KA Sbjct: 62 NWCPHCRLKKCFAVSMNTAAVQEERGPRSRSKA 94 >UniRef50_A5WYG8 Cluster: Pregnane X receptor; n=5; Danio rerio|Rep: Pregnane X receptor - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 430 Score = 35.9 bits (79), Expect = 0.80 Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Frame = +3 Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSS--SSRAHE 488 S+ V + +CQ CRL+KC+++GM R+ + ++ + +I Q + + Sbjct: 86 SACVITKSNRRQCQSCRLQKCLSIGMKRELIMSDEAVEKRRLQIRRKRMQEEPVTLTPQQ 145 Query: 489 QAAAAELDDAPRLLARVVRAH 551 +A EL +A + + AH Sbjct: 146 EAVIQELLNAHKKTFDMTCAH 166 >UniRef50_Q95XH8 Cluster: Putative uncharacterized protein; n=1; Caenorhabditis elegans|Rep: Putative uncharacterized protein - Caenorhabditis elegans Length = 347 Score = 35.9 bits (79), Expect = 0.80 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Frame = +3 Query: 339 TGNRCQYCRLKKCIAVGMSRDAVR----FG-RVPKREKARILAAMQQSSSSRAHEQAAAA 503 T N C+ CRL+KC+ VGM+ +A++ G R PK K R+ A S S + Sbjct: 69 TRNTCRACRLQKCLNVGMNPNAIQRRDEIGPRKPKVSKHRLTCAQNFSFSGETQNNFSQK 128 Query: 504 ELDDA 518 + + A Sbjct: 129 QYNAA 133 >UniRef50_Q7PQN6 Cluster: ENSANGP00000012911; n=2; Culicidae|Rep: ENSANGP00000012911 - Anopheles gambiae str. PEST Length = 714 Score = 35.9 bits (79), Expect = 0.80 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Frame = +3 Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV--RFGRVPKREKARILAAMQQSSSSRAHEQAAA 500 +T CQ CRL+KC +GM ++ + +V KR+K A ++ S+ A E +A+ Sbjct: 58 VTRRFCQKCRLEKCFRIGMKKEYIMSEEDKVLKRKKIEQNRAKKRQSNGSASEGSAS 114 >UniRef50_Q61KE7 Cluster: Putative uncharacterized protein CBG09399; n=1; Caenorhabditis briggsae|Rep: Putative uncharacterized protein CBG09399 - Caenorhabditis briggsae Length = 484 Score = 35.9 bits (79), Expect = 0.80 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR 419 N C+ CR KKC+AVGM+ D V++ R Sbjct: 122 NVCRDCRYKKCLAVGMTPDNVQYNR 146 >UniRef50_Q06AL0 Cluster: Estrogen receptor-related receptor; n=1; Marisa cornuarietis|Rep: Estrogen receptor-related receptor - Marisa cornuarietis Length = 424 Score = 35.9 bits (79), Expect = 0.80 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422 CQ CR +KC+ VGM R+ VR RV Sbjct: 141 CQACRFQKCLRVGMLREGVRLDRV 164 >UniRef50_A5Z0M1 Cluster: UNC-55a isoform; n=8; Caenorhabditis|Rep: UNC-55a isoform - Caenorhabditis elegans Length = 370 Score = 35.9 bits (79), Expect = 0.80 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 N+CQYCRL KCI +GM ++ R Sbjct: 71 NQCQYCRLTKCIRMGMRKEGRR 92 >UniRef50_O18141 Cluster: Nuclear hormone receptor family member nhr-79; n=3; Caenorhabditis|Rep: Nuclear hormone receptor family member nhr-79 - Caenorhabditis elegans Length = 463 Score = 35.9 bits (79), Expect = 0.80 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443 C++CRLKKC GM RD V+ R K +K + Sbjct: 61 CRHCRLKKCQKAGMMRDLVQAKREIKSDKGK 91 >UniRef50_Q25604 Cluster: Nuclear hormone receptor-like 1; n=1; Onchocerca volvulus|Rep: Nuclear hormone receptor-like 1 - Onchocerca volvulus Length = 367 Score = 35.9 bits (79), Expect = 0.80 Identities = 15/30 (50%), Positives = 23/30 (76%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343 +GFFRR++QQKI Y+ C ++C I +I+R Sbjct: 56 KGFFRRTVQQKIVYK-CKSIERCEISKISR 84 >UniRef50_UPI000155C258 Cluster: PREDICTED: similar to photoreceptor-specific nuclear receptor; n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to photoreceptor-specific nuclear receptor - Ornithorhynchus anatinus Length = 178 Score = 35.5 bits (78), Expect = 1.1 Identities = 12/20 (60%), Positives = 17/20 (85%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDA 404 N+CQ CRL+KC+ GM++DA Sbjct: 146 NQCQACRLRKCLQAGMNKDA 165 >UniRef50_UPI00015A74A9 Cluster: nuclear receptor subfamily 2, group E, member 1; n=1; Danio rerio|Rep: nuclear receptor subfamily 2, group E, member 1 - Danio rerio Length = 466 Score = 35.5 bits (78), Expect = 1.1 Identities = 12/21 (57%), Positives = 18/21 (85%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAV 407 N+C+ CRLKKC+ V M++DA+ Sbjct: 53 NQCRACRLKKCLEVNMNKDAI 73 >UniRef50_Q617F3 Cluster: Putative uncharacterized protein CBG14996; n=1; Caenorhabditis briggsae|Rep: Putative uncharacterized protein CBG14996 - Caenorhabditis briggsae Length = 449 Score = 35.5 bits (78), Expect = 1.1 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431 NRC+ CRL+KC +VGM +V+ R P + Sbjct: 70 NRCRACRLQKCYSVGMDEKSVQSERHPAK 98 >UniRef50_Q4H3L1 Cluster: Nuclear receptor; n=1; Ciona intestinalis|Rep: Nuclear receptor - Ciona intestinalis (Transparent sea squirt) Length = 515 Score = 35.5 bits (78), Expect = 1.1 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422 CQ CR KC+ VGM R+ VR RV Sbjct: 228 CQSCRFSKCLRVGMLREGVRLDRV 251 >UniRef50_Q2TUU6 Cluster: Thyroid hormone receptor beta; n=2; Schistosoma mansoni|Rep: Thyroid hormone receptor beta - Schistosoma mansoni (Blood fluke) Length = 847 Score = 35.5 bits (78), Expect = 1.1 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = +3 Query: 324 VSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503 VS N CQ CR +CI+ GM++D V + K R++ A + + A E + A Sbjct: 193 VSDKQNRNSCQKCRFDRCISGGMAKDLV-LDEDKRLAKRRLIEANRARKRAEAIEASTAV 251 Query: 504 ELDD 515 + D Sbjct: 252 YVTD 255 >UniRef50_Q18392 Cluster: Putative uncharacterized protein C33G8.12; n=1; Caenorhabditis elegans|Rep: Putative uncharacterized protein C33G8.12 - Caenorhabditis elegans Length = 358 Score = 35.5 bits (78), Expect = 1.1 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = +3 Query: 282 RRYNTGPARRTSSVVSSGLTGNR-CQYCRLKKCIAVGMSRDAVRFGRVPKREKARIL 449 RRY + S L + C+YCR+ KC+ +GM + V+ P REK +IL Sbjct: 39 RRYVHSTKQEISCTCDQRLISSHPCRYCRMLKCMKIGMCKTQVQ----PPREKNKIL 91 >UniRef50_Q14EL7 Cluster: FTZ-F1-alpha; n=10; Eumetazoa|Rep: FTZ-F1-alpha - Schistosoma mansoni (Blood fluke) Length = 1892 Score = 35.5 bits (78), Expect = 1.1 Identities = 14/25 (56%), Positives = 18/25 (72%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422 RC YCR +KC+ VGM +AVR R+ Sbjct: 160 RCAYCRFQKCLIVGMRVEAVREDRM 184 >UniRef50_A5JPH1 Cluster: Estrogen receptor; n=1; Branchiostoma floridae|Rep: Estrogen receptor - Branchiostoma floridae (Florida lancelet) (Amphioxus) Length = 491 Score = 35.5 bits (78), Expect = 1.1 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 2/31 (6%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFG--RVPKREK 437 CQ CR +KC+ VGM++D R G R P+R++ Sbjct: 136 CQACRYRKCLMVGMTKDGRRSGERRGPRRKR 166 >UniRef50_A1ZA02 Cluster: CG16801-PA, isoform A; n=1; Drosophila melanogaster|Rep: CG16801-PA, isoform A - Drosophila melanogaster (Fruit fly) Length = 532 Score = 35.5 bits (78), Expect = 1.1 Identities = 12/19 (63%), Positives = 17/19 (89%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRD 401 N+CQ CRLKKC+ +GM++D Sbjct: 280 NQCQACRLKKCLQMGMNKD 298 >UniRef50_O02235 Cluster: Nuclear hormone receptor family member nhr-89; n=1; Caenorhabditis elegans|Rep: Nuclear hormone receptor family member nhr-89 - Caenorhabditis elegans Length = 310 Score = 35.5 bits (78), Expect = 1.1 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 6/111 (5%) Frame = +3 Query: 222 KETLLNVAVTRRASSGDLYNRRYNTG---PARRTSSVVSSGLTGNRCQYCRLKKCIAVGM 392 K T + +T S + R N PA + +++ C+ CR KC+ GM Sbjct: 15 KGTRRHFGITACMSCSSFFRRSLNCKFYCPANNSCTILDD--QKQFCRSCRYNKCVQSGM 72 Query: 393 SRDAVR---FGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLAR 536 RD VR + R R++A+ A + S ++E+ + +A +AR Sbjct: 73 RRDCVRKQSYRRQAGRKEAKSPAVSCSNKLSESYEELLNFYVKEANESIAR 123 >UniRef50_UPI00015B595D Cluster: PREDICTED: similar to CG16801-PA; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to CG16801-PA - Nasonia vitripennis Length = 494 Score = 35.1 bits (77), Expect = 1.4 Identities = 12/19 (63%), Positives = 17/19 (89%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRD 401 N+CQ CRLKKC+ +GM++D Sbjct: 230 NQCQACRLKKCMQMGMNKD 248 >UniRef50_UPI0000DC039A Cluster: Steroidogenic factor 1 (STF-1) (SF-1) (Adrenal 4-binding protein) (Steroid hormone receptor Ad4BP) (Fushi tarazu factor homolog 1).; n=1; Rattus norvegicus|Rep: Steroidogenic factor 1 (STF-1) (SF-1) (Adrenal 4-binding protein) (Steroid hormone receptor Ad4BP) (Fushi tarazu factor homolog 1). - Rattus norvegicus Length = 331 Score = 35.1 bits (77), Expect = 1.4 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422 RC +CR +KC+ VGM +AVR R+ Sbjct: 53 RCPFCRFQKCLTVGMRLEAVRADRM 77 Score = 32.3 bits (70), Expect = 9.9 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373 +GFF+R++Q Y CT++Q C I + R+ P +K Sbjct: 23 KGFFKRTVQNNKHYT-CTESQSCKIDKTQRKRCPFCRFQK 61 >UniRef50_Q9GTC9 Cluster: Nuclear receptor NHR-88; n=3; Caenorhabditis elegans|Rep: Nuclear receptor NHR-88 - Caenorhabditis elegans Length = 598 Score = 35.1 bits (77), Expect = 1.4 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410 N C+YCR ++C+ VGM +A+R Sbjct: 91 NACRYCRFQRCLTVGMEPEAIR 112 >UniRef50_Q7QKA0 Cluster: ENSANGP00000013419; n=3; Culicidae|Rep: ENSANGP00000013419 - Anopheles gambiae str. PEST Length = 278 Score = 35.1 bits (77), Expect = 1.4 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446 N C +CRL+KC VGM+ AV+ R P++ + + Sbjct: 60 NWCPFCRLQKCFLVGMNAAAVQQERGPRKGRKMV 93 >UniRef50_Q61XA5 Cluster: Putative uncharacterized protein CBG04060; n=1; Caenorhabditis briggsae|Rep: Putative uncharacterized protein CBG04060 - Caenorhabditis briggsae Length = 502 Score = 35.1 bits (77), Expect = 1.4 Identities = 14/29 (48%), Positives = 22/29 (75%), Gaps = 1/29 (3%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVRFGR-VPKR 431 RCQ CR +C+AVGM++++VR + PK+ Sbjct: 303 RCQACRYARCLAVGMNKESVRITKDEPKK 331 >UniRef50_Q61AX8 Cluster: Putative uncharacterized protein CBG13579; n=1; Caenorhabditis briggsae|Rep: Putative uncharacterized protein CBG13579 - Caenorhabditis briggsae Length = 470 Score = 35.1 bits (77), Expect = 1.4 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV--PKREKARILAAMQQ 464 C+YCRL+KC VGM A++ V P++ K++ + Q+ Sbjct: 97 CRYCRLQKCFTVGMKASAIQRRDVMGPRKPKSKDIPIKQE 136 >UniRef50_Q4H3G7 Cluster: Nuclear receptor; n=1; Ciona intestinalis|Rep: Nuclear receptor - Ciona intestinalis (Transparent sea squirt) Length = 504 Score = 35.1 bits (77), Expect = 1.4 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDA 518 CQ CR +KC+ VGM +AVR RV R + + +R A +E+ D+ Sbjct: 61 CQACRFQKCLRVGMKLEAVRRDRV--RGGRNKFGPLYKQDRARKQRLKALSEVHDS 114 >UniRef50_Q1RLF6 Cluster: Nuclear receptor; n=2; Ciona intestinalis|Rep: Nuclear receptor - Ciona intestinalis (Transparent sea squirt) Length = 656 Score = 35.1 bits (77), Expect = 1.4 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +3 Query: 339 TGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKA 440 T C YCR +KC+ VGM ++ VR R KA Sbjct: 534 TRTHCPYCRYQKCLRVGMIKNVVRTDPHQSRRKA 567 >UniRef50_A7SVT5 Cluster: Predicted protein; n=2; Actiniaria|Rep: Predicted protein - Nematostella vectensis Length = 347 Score = 35.1 bits (77), Expect = 1.4 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRD 401 NRCQYCR +KCI GM ++ Sbjct: 66 NRCQYCRFQKCIQAGMIKE 84 >UniRef50_A7SD88 Cluster: Predicted protein; n=4; Eumetazoa|Rep: Predicted protein - Nematostella vectensis Length = 340 Score = 35.1 bits (77), Expect = 1.4 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425 N+CQ CR KKC+ V M+R AV+ R P Sbjct: 59 NQCQACRFKKCLEVKMNRFAVQQERQP 85 >UniRef50_P18119 Cluster: Thyroid hormone receptor beta-B; n=19; Tetrapoda|Rep: Thyroid hormone receptor beta-B - Xenopus laevis (African clawed frog) Length = 414 Score = 35.1 bits (77), Expect = 1.4 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +3 Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV 407 +T N+CQ CR KKC VGM+ D V Sbjct: 109 VTRNQCQECRFKKCKTVGMATDLV 132 >UniRef50_Q13285 Cluster: Steroidogenic factor 1; n=59; Euteleostomi|Rep: Steroidogenic factor 1 - Homo sapiens (Human) Length = 461 Score = 35.1 bits (77), Expect = 1.4 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422 RC +CR +KC+ VGM +AVR R+ Sbjct: 64 RCPFCRFQKCLTVGMRLEAVRADRM 88 Score = 32.3 bits (70), Expect = 9.9 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373 +GFF+R++Q Y CT++Q C I + R+ P +K Sbjct: 34 KGFFKRTVQNNKHYT-CTESQSCKIDKTQRKRCPFCRFQK 72 >UniRef50_O02151 Cluster: Nuclear hormone receptor family member nhr-14; n=3; Caenorhabditis|Rep: Nuclear hormone receptor family member nhr-14 - Caenorhabditis elegans Length = 435 Score = 35.1 bits (77), Expect = 1.4 Identities = 18/61 (29%), Positives = 33/61 (54%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 N C+YCR +KC+A GM +A+ + E+ RI + ++ S E + +E +P+ Sbjct: 70 NACRYCRFQKCLADGMKPEAI------QNERDRIGSTKRRKRSGANSENNSDSEGTPSPK 123 Query: 525 L 527 + Sbjct: 124 I 124 Score = 33.9 bits (74), Expect = 3.2 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = +2 Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRES 349 +GFFRRS+ Q +QY C N+QC+I + +R + Sbjct: 41 KGFFRRSVWQNLQY-TCRFNKQCNIDKDHRNA 71 >UniRef50_P41999 Cluster: Nuclear hormone receptor family member nhr-10; n=9; Caenorhabditis|Rep: Nuclear hormone receptor family member nhr-10 - Caenorhabditis elegans Length = 395 Score = 35.1 bits (77), Expect = 1.4 Identities = 12/25 (48%), Positives = 19/25 (76%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425 C++CR +KC+ VGM R+A++ R P Sbjct: 70 CRHCRFEKCLQVGMDRNAIQQNRDP 94 >UniRef50_Q6Q6F3 Cluster: Estrogen-related receptor delta; n=3; Danio rerio|Rep: Estrogen-related receptor delta - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 344 Score = 34.7 bits (76), Expect = 1.9 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422 CQ CR +KC+ GM R+ VR RV Sbjct: 66 CQACRFQKCLRAGMMREGVRMDRV 89 >UniRef50_O42550 Cluster: PPARG; n=12; Clupeocephala|Rep: PPARG - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 44 Score = 34.7 bits (76), Expect = 1.9 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMS 395 N+CQYCR +KC VGMS Sbjct: 28 NKCQYCRFQKCFPVGMS 44 >UniRef50_Q9VI12 Cluster: CG10296-PA; n=2; Sophophora|Rep: CG10296-PA - Drosophila melanogaster (Fruit fly) Length = 278 Score = 34.7 bits (76), Expect = 1.9 Identities = 21/73 (28%), Positives = 36/73 (49%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524 N C CR ++C+AVGM+ AV+ R P+ ++ +A + QAA + + Sbjct: 58 NWCPSCRFQRCLAVGMNAAAVQEERGPRNQQ---VALYRTGRRQAPPSQAAPSPTPHSQA 114 Query: 525 LLARVVRAHLDTC 563 L +++ L TC Sbjct: 115 LHFQILAQILVTC 127 >UniRef50_Q9GTG3 Cluster: Nuclear receptor NHR-50; n=2; Caenorhabditis elegans|Rep: Nuclear receptor NHR-50 - Caenorhabditis elegans Length = 116 Score = 34.7 bits (76), Expect = 1.9 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGR---VPKREKARILAAMQQSSSS 476 C+ CR+KKC+++GM+ + V+ R PK+ K ++ SSSS Sbjct: 52 CRECRIKKCLSIGMNPEKVQEKRERHPPKKNKPPSISEALTSSSS 96 >UniRef50_Q95YJ6 Cluster: Nuclear receptor 1; n=1; Ciona savignyi|Rep: Nuclear receptor 1 - Ciona savignyi (Pacific transparent sea squirt) Length = 600 Score = 34.7 bits (76), Expect = 1.9 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +3 Query: 345 NRCQYCRLKKCIAVGMSRDAV 407 N+CQ CR KKCI GM+ D V Sbjct: 97 NQCQLCRYKKCITTGMATDLV 117 >UniRef50_Q61R49 Cluster: Putative uncharacterized protein CBG06732; n=1; Caenorhabditis briggsae|Rep: Putative uncharacterized protein CBG06732 - Caenorhabditis briggsae Length = 303 Score = 34.7 bits (76), Expect = 1.9 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +3 Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPK 428 RCQ CR KKCI VGM+ A+ K Sbjct: 63 RCQSCRFKKCIEVGMNSKALELNETEK 89 >UniRef50_Q21700 Cluster: Putative uncharacterized protein nhr-205; n=2; Caenorhabditis|Rep: Putative uncharacterized protein nhr-205 - Caenorhabditis elegans Length = 387 Score = 34.7 bits (76), Expect = 1.9 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGR-VPKREKARILAAMQQS 467 C+ CRL KC+ +GM R V+ R P++E+ IL +M S Sbjct: 75 CKSCRLNKCLNLGMKRSCVQPRRDKPQKEEKLILPSMNVS 114 >UniRef50_Q1RL97 Cluster: Nuclear receptor; n=2; Ciona intestinalis|Rep: Nuclear receptor - Ciona intestinalis (Transparent sea squirt) Length = 391 Score = 34.7 bits (76), Expect = 1.9 Identities = 20/73 (27%), Positives = 33/73 (45%) Frame = +3 Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530 CQ CR C+A GM+ + + K R L M + S QA +D+ L+ Sbjct: 43 CQACRFNACLAAGMNSSLILSDE--EVNKKRDLIRMNREKSGSKQPQATRMTMDE-KLLV 99 Query: 531 ARVVRAHLDTCEF 569 +++ H D+ +F Sbjct: 100 KTLLKGHRDSYDF 112 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 545,643,967 Number of Sequences: 1657284 Number of extensions: 9356456 Number of successful extensions: 34485 Number of sequences better than 10.0: 309 Number of HSP's better than 10.0 without gapping: 32856 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 34452 length of database: 575,637,011 effective HSP length: 97 effective length of database: 414,880,463 effective search space used: 46466611856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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