Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0965
(629 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50239 Cluster: Ecdysone-inducible protein E75; n=17; E... 146 3e-34
UniRef50_Q0JRL0 Cluster: Ecdysone-induced protein 75C; n=8; Coel... 136 5e-31
UniRef50_P13055 Cluster: Ecdysone-induced protein 75B isoform B;... 134 1e-30
UniRef50_Q3I5Q8 Cluster: E75 nuclear receptor; n=1; Gecarcinus l... 119 5e-26
UniRef50_O77245 Cluster: Nuclear hormone receptor E75; n=9; Coel... 118 1e-25
UniRef50_Q9XUK7 Cluster: Nuclear hormone receptor family member ... 79 9e-14
UniRef50_Q4RW38 Cluster: Chromosome 9 SCAF14991, whole genome sh... 78 2e-13
UniRef50_P20393 Cluster: Orphan nuclear receptor NR1D1; n=25; Th... 77 3e-13
UniRef50_Q6TNS3 Cluster: Nuclear receptor subfamily 1, group D, ... 76 6e-13
UniRef50_Q4RXZ3 Cluster: Chromosome 11 SCAF14979, whole genome s... 76 6e-13
UniRef50_UPI0000F1EFB0 Cluster: PREDICTED: similar to Rev-Erb be... 73 4e-12
UniRef50_Q90Z65 Cluster: Rev-Erb beta 1; n=5; Euteleostomi|Rep: ... 73 4e-12
UniRef50_Q1L684 Cluster: Rev-erbgamma-A; n=7; Clupeocephala|Rep:... 73 4e-12
UniRef50_Q14995 Cluster: Orphan nuclear receptor NR1D2; n=48; Eu... 73 4e-12
UniRef50_Q90Z63 Cluster: Rev-Erb beta; n=3; Euteleostei|Rep: Rev... 72 1e-11
UniRef50_UPI00004D0DA7 Cluster: Orphan nuclear receptor NR1D2 (R... 68 2e-10
UniRef50_A7LC92 Cluster: Nuclear receptor; n=2; Onchocercidae|Re... 68 2e-10
UniRef50_UPI0000588E36 Cluster: PREDICTED: similar to peroxisome... 66 7e-10
UniRef50_Q4H2X6 Cluster: Nuclear receptor; n=3; Ciona intestinal... 64 2e-09
UniRef50_UPI0000D55BCD Cluster: PREDICTED: similar to CG18023-PA... 64 3e-09
UniRef50_P45447 Cluster: Ecdysone-induced protein 78C; n=5; Dipt... 64 3e-09
UniRef50_A7MAD3 Cluster: Ecdysone-induced protein 78C; n=3; Endo... 63 5e-09
UniRef50_Q4H2V7 Cluster: Nuclear receptor; n=1; Ciona intestinal... 63 6e-09
UniRef50_P51449 Cluster: Nuclear receptor ROR-gamma; n=34; Amnio... 63 6e-09
UniRef50_P35398 Cluster: Nuclear receptor ROR-alpha; n=84; Eutel... 62 8e-09
UniRef50_Q2LYQ2 Cluster: GA14768-PA; n=1; Drosophila pseudoobscu... 62 1e-08
UniRef50_P41828 Cluster: Nuclear hormone receptor family member ... 62 1e-08
UniRef50_Q4RV24 Cluster: Chromosome 15 SCAF14992, whole genome s... 62 1e-08
UniRef50_A1DYE6 Cluster: Nuclear receptor-like protein; n=1; Tri... 62 1e-08
UniRef50_P37231 Cluster: Peroxisome proliferator-activated recep... 62 1e-08
UniRef50_UPI0000F21513 Cluster: PREDICTED: hypothetical protein;... 61 2e-08
UniRef50_Q1L678 Cluster: RORgamma-B; n=13; Euteleostomi|Rep: ROR... 61 2e-08
UniRef50_UPI0000F2CB6C Cluster: PREDICTED: similar to beta-1,4-N... 61 2e-08
UniRef50_P31396 Cluster: Probable nuclear hormone receptor HR3; ... 61 2e-08
UniRef50_UPI0000584695 Cluster: PREDICTED: similar to ecdysone-i... 60 3e-08
UniRef50_Q90Z66 Cluster: Peroxisome proliferator-activated recep... 60 3e-08
UniRef50_Q0KFU8 Cluster: HR3 isoform B1; n=3; Blattella germanic... 60 3e-08
UniRef50_Q967S3 Cluster: Nuclear receptor nhr-7A; n=4; Onchocerc... 60 4e-08
UniRef50_UPI0000E481C8 Cluster: PREDICTED: similar to nuclear ho... 59 8e-08
UniRef50_Q9BWQ7 Cluster: Peroxisome proliferator-activated recep... 59 8e-08
UniRef50_Q07869 Cluster: Peroxisome proliferator-activated recep... 59 8e-08
UniRef50_UPI0000EB467C Cluster: UPI0000EB467C related cluster; n... 58 1e-07
UniRef50_Q90Y02 Cluster: Peroxisome proliferator-activated recep... 58 1e-07
UniRef50_Q4RVW1 Cluster: Chromosome 9 SCAF14991, whole genome sh... 58 1e-07
UniRef50_Q4H2V2 Cluster: Nuclear receptor; n=2; Ciona intestinal... 58 1e-07
UniRef50_O02643 Cluster: Hormone receptor 3C; n=1; Choristoneura... 58 2e-07
UniRef50_Q2TUU3 Cluster: Ecdysone-induced protein E78; n=3; Schi... 58 2e-07
UniRef50_Q4SHA3 Cluster: Chromosome 19 SCAF14584, whole genome s... 57 4e-07
UniRef50_UPI0000E494CA Cluster: PREDICTED: similar to peroxisome... 54 4e-06
UniRef50_Q4SGI2 Cluster: Chromosome undetermined SCAF14594, whol... 53 7e-06
UniRef50_UPI0000586F42 Cluster: PREDICTED: similar to GA17350-PA... 52 9e-06
UniRef50_UPI00005864C9 Cluster: PREDICTED: similar to E75 nuclea... 52 9e-06
UniRef50_Q66MI8 Cluster: COUP-TF1 nuclear orphan receptor; n=2; ... 52 1e-05
UniRef50_UPI0000E4819E Cluster: PREDICTED: similar to Nr1h3 prot... 51 2e-05
UniRef50_Q1W404 Cluster: RAR-like nuclear receptor; n=5; Schisto... 51 2e-05
UniRef50_P13631 Cluster: Retinoic acid receptor gamma-1; n=5; Co... 51 2e-05
UniRef50_Q4REU2 Cluster: Chromosome 13 SCAF15122, whole genome s... 50 3e-05
UniRef50_P10589 Cluster: COUP transcription factor 1; n=130; Eum... 49 8e-05
UniRef50_P16376 Cluster: Steroid receptor seven-up, isoform A; n... 49 8e-05
UniRef50_Q611B9 Cluster: Putative uncharacterized protein CBG171... 49 1e-04
UniRef50_A7S1X4 Cluster: Predicted protein; n=1; Nematostella ve... 49 1e-04
UniRef50_P10276 Cluster: Retinoic acid receptor alpha; n=207; Eu... 49 1e-04
UniRef50_UPI0000F2CA65 Cluster: PREDICTED: similar to DNA (cytos... 48 2e-04
UniRef50_Q26641 Cluster: COUP transcription factor; n=2; Strongy... 48 2e-04
UniRef50_UPI0000EB22C7 Cluster: UPI0000EB22C7 related cluster; n... 47 3e-04
UniRef50_Q173C6 Cluster: Expressed protein; n=1; Aedes aegypti|R... 47 3e-04
UniRef50_Q8I748 Cluster: Retinoid X receptor; n=1; Suberites dom... 47 4e-04
UniRef50_Q52ZN9 Cluster: Nuclear receptor usp/RXR; n=2; Coelomat... 46 6e-04
UniRef50_A1ZA01 Cluster: CG16801-PB, isoform B; n=5; Endopterygo... 46 6e-04
UniRef50_Q4H2W2 Cluster: Nuclear receptor; n=4; Ascidiacea|Rep: ... 46 7e-04
UniRef50_Q4H2U9 Cluster: Nuclear receptor; n=9; Coelomata|Rep: N... 46 7e-04
UniRef50_Q9Y5X4 Cluster: Photoreceptor-specific nuclear receptor... 46 7e-04
UniRef50_Q24142 Cluster: Nuclear hormone receptor HR78; n=4; Sop... 46 7e-04
UniRef50_UPI0000D8B087 Cluster: UPI0000D8B087 related cluster; n... 46 0.001
UniRef50_P13056 Cluster: Orphan nuclear receptor TR2; n=78; Eute... 46 0.001
UniRef50_UPI000065F8EB Cluster: Homolog of Gallus gallus "Nuclea... 45 0.001
UniRef50_O77230 Cluster: Nuclear hormone receptor; n=1; Brugia p... 45 0.002
UniRef50_UPI0000DB6D60 Cluster: PREDICTED: similar to Orphan nuc... 44 0.002
UniRef50_UPI00006A05FD Cluster: Orphan nuclear receptor TR4 (Orp... 44 0.002
UniRef50_Q7Q2K7 Cluster: ENSANGP00000003675; n=1; Anopheles gamb... 44 0.002
UniRef50_A7TAF5 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.002
UniRef50_A7MAD8 Cluster: Hormone receptor-like in 4; n=3; Aedes ... 44 0.002
UniRef50_O76202 Cluster: Protein ultraspiracle homolog; n=5; Dit... 44 0.002
UniRef50_Q9W539 Cluster: Hormone receptor 4; n=2; Pancrustacea|R... 44 0.002
UniRef50_Q95WG3 Cluster: Nuclear receptor AmNR2; n=2; Hexacorall... 44 0.003
UniRef50_Q4KXQ1 Cluster: TR4/TR2; n=11; Eumetazoa|Rep: TR4/TR2 -... 44 0.003
UniRef50_Q17K29 Cluster: Nuclear hormone receptor; n=2; Culicida... 44 0.003
UniRef50_O61227 Cluster: Nuclear receptor; n=1; Tenebrio molitor... 44 0.003
UniRef50_A7S286 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.003
UniRef50_UPI0000E479AD Cluster: PREDICTED: similar to MGC79469 p... 44 0.004
UniRef50_Q703I8 Cluster: Zinc finger transcription factor; n=2; ... 44 0.004
UniRef50_P90892 Cluster: Defective fasciculation of axons protei... 44 0.004
UniRef50_P18102 Cluster: Protein tailless; n=10; Diptera|Rep: Pr... 44 0.004
UniRef50_Q15406 Cluster: Orphan nuclear receptor NR6A1; n=53; Eu... 44 0.004
UniRef50_Q90WV5 Cluster: Photoreceptor-specific nuclear receptor... 43 0.005
UniRef50_A5HL80 Cluster: Retinoid X receptor alpha 2; n=2; Clupe... 43 0.005
UniRef50_Q16IX1 Cluster: Putative uncharacterized protein; n=1; ... 43 0.005
UniRef50_UPI000051A33D Cluster: PREDICTED: similar to photorecep... 43 0.007
UniRef50_UPI000065FDEF Cluster: Homolog of Gallus gallus "Nuclea... 43 0.007
UniRef50_Q95WG1 Cluster: Nuclear receptor AmNR4 isoform A; n=3; ... 43 0.007
UniRef50_Q617F2 Cluster: Putative uncharacterized protein CBG149... 43 0.007
UniRef50_Q4H3F3 Cluster: Nuclear receptor; n=1; Ciona intestinal... 43 0.007
UniRef50_P28702 Cluster: Retinoic acid receptor RXR-beta; n=240;... 43 0.007
UniRef50_Q9XVV3 Cluster: Nuclear hormone receptor family member ... 43 0.007
UniRef50_P41830 Cluster: Steroid hormone receptor family member ... 43 0.007
UniRef50_UPI0000DB6EB1 Cluster: PREDICTED: similar to Nuclear Ho... 42 0.009
UniRef50_Q9NCL0 Cluster: Tailless ortholog; n=3; Coelomata|Rep: ... 42 0.009
UniRef50_Q95WF8 Cluster: Nuclear receptor AmNR6; n=2; Astrocoeni... 42 0.009
UniRef50_Q8WSJ4 Cluster: Hormone receptor 4; n=3; Obtectomera|Re... 42 0.009
UniRef50_Q26622 Cluster: Orphan steroid hormone receptor 2; n=7;... 42 0.009
UniRef50_P13054 Cluster: Knirps-related protein; n=2; Sophophora... 42 0.009
UniRef50_UPI00015B573C Cluster: PREDICTED: similar to thr4; n=1;... 42 0.012
UniRef50_UPI0000588887 Cluster: PREDICTED: similar to GA10225-PA... 42 0.012
UniRef50_Q4T0V6 Cluster: Chromosome undetermined SCAF10841, whol... 42 0.012
UniRef50_Q4RXK2 Cluster: Chromosome 11 SCAF14979, whole genome s... 42 0.012
UniRef50_Q4U1Y2 Cluster: Steroid hormone receptor 3; n=1; Strong... 42 0.012
UniRef50_Q0IGD6 Cluster: Tailless; n=1; Aedes aegypti|Rep: Taill... 42 0.012
UniRef50_A7S012 Cluster: Predicted protein; n=1; Nematostella ve... 42 0.012
UniRef50_P49116 Cluster: Orphan nuclear receptor TR4; n=13; Eume... 42 0.012
UniRef50_P43354 Cluster: Orphan nuclear receptor NR4A2; n=77; Eu... 42 0.012
UniRef50_Q10902 Cluster: Nuclear hormone receptor family member ... 42 0.012
UniRef50_UPI00015B4A62 Cluster: PREDICTED: similar to nuclear re... 42 0.016
UniRef50_UPI0000DB771B Cluster: PREDICTED: similar to Hormone re... 42 0.016
UniRef50_Q98ST8 Cluster: Ff1c; n=6; Clupeocephala|Rep: Ff1c - Da... 42 0.016
UniRef50_Q7ZZY9 Cluster: Vitamin D receptor; n=1; Petromyzon mar... 42 0.016
UniRef50_Q4SD43 Cluster: Chromosome 1 SCAF14643, whole genome sh... 42 0.016
UniRef50_Q49MA6 Cluster: Nuclear receptor 2DBD-gamma; n=3; Bilat... 42 0.016
UniRef50_Q1RPY8 Cluster: Nuclear receptor; n=2; Ciona intestinal... 42 0.016
UniRef50_Q92570 Cluster: Orphan nuclear receptor NR4A3; n=26; Eu... 42 0.016
UniRef50_Q9Y466 Cluster: Orphan nuclear receptor NR2E1; n=38; Eu... 42 0.016
UniRef50_P15370 Cluster: Protein embryonic gonad; n=2; Sophophor... 42 0.016
UniRef50_UPI0000E47369 Cluster: PREDICTED: similar to ROR-alpha ... 37 0.018
UniRef50_Q7PUT9 Cluster: ENSANGP00000017626; n=12; Endopterygota... 41 0.021
UniRef50_A0NCV2 Cluster: ENSANGP00000031834; n=2; Culicidae|Rep:... 41 0.021
UniRef50_P10827 Cluster: Thyroid hormone receptor alpha; n=186; ... 41 0.021
UniRef50_Q9N4B8 Cluster: Nuclear hormone receptor family member ... 41 0.021
UniRef50_UPI0000F1FFCD Cluster: PREDICTED: neural orphan nuclear... 41 0.028
UniRef50_UPI0000D55997 Cluster: PREDICTED: similar to Knirps-rel... 41 0.028
UniRef50_UPI0000D556F1 Cluster: PREDICTED: similar to CG9019-PA;... 41 0.028
UniRef50_UPI0000584A1E Cluster: PREDICTED: similar to nuclear re... 41 0.028
UniRef50_UPI000051A1CD Cluster: PREDICTED: similar to Knirps-rel... 41 0.028
UniRef50_Q4RI46 Cluster: Chromosome 8 SCAF15044, whole genome sh... 41 0.028
UniRef50_Q2M0D5 Cluster: GA17924-PA; n=1; Drosophila pseudoobscu... 41 0.028
UniRef50_O96562 Cluster: Retinoic acid X receptor; n=1; Tripedal... 41 0.028
UniRef50_Q20765 Cluster: Nuclear hormone receptor family member ... 41 0.028
UniRef50_O45666 Cluster: Nuclear hormone receptor family member ... 41 0.028
UniRef50_P33244 Cluster: Nuclear hormone receptor FTZ-F1; n=4; C... 41 0.028
UniRef50_UPI0000E4A84F Cluster: PREDICTED: similar to retinoic X... 40 0.037
UniRef50_Q90Y24 Cluster: Thyroid hormone receptor alpha small is... 40 0.037
UniRef50_Q4RI90 Cluster: Chromosome 8 SCAF15044, whole genome sh... 40 0.037
UniRef50_Q9NB03 Cluster: Nuclear receptor FTZ-F1 protein; n=2; A... 40 0.037
UniRef50_Q4H333 Cluster: Nuclear receptor; n=2; Coelomata|Rep: N... 40 0.037
UniRef50_Q3I5Q0 Cluster: RXRc nuclear hormone receptor; n=4; Dec... 40 0.037
UniRef50_UPI0000E460D2 Cluster: PREDICTED: similar to orphan nuc... 40 0.049
UniRef50_UPI0000DB6F53 Cluster: PREDICTED: similar to nuclear re... 40 0.049
UniRef50_Q9Y1J4 Cluster: Retinoid X receptor RXR-2; n=10; Bilate... 40 0.049
UniRef50_Q9Y0D1 Cluster: Fushi tarazu-factor 1; n=4; Pancrustace... 40 0.049
UniRef50_Q8ST32 Cluster: Nuclear receptor RXR; n=1; Dirofilaria ... 40 0.049
UniRef50_Q2TUU9 Cluster: Two-DBD-nuclear receptor; n=3; Schistos... 40 0.049
UniRef50_Q4SGI3 Cluster: Chromosome undetermined SCAF14594, whol... 40 0.065
UniRef50_A7RX15 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.065
UniRef50_P20153 Cluster: Protein ultraspiracle; n=6; Schizophora... 40 0.065
UniRef50_Q9U2R6 Cluster: Nuclear hormone receptor family member ... 40 0.065
UniRef50_P41829 Cluster: Nuclear hormone receptor family member ... 40 0.065
UniRef50_UPI0000587672 Cluster: PREDICTED: similar to tailless; ... 39 0.086
UniRef50_Q49MV3 Cluster: Nuclear receptor 2DBD-beta; n=2; Schist... 39 0.086
UniRef50_P49869 Cluster: Probable nuclear hormone receptor HR38;... 39 0.086
UniRef50_O42554 Cluster: ReverbB; n=2; Danio rerio|Rep: ReverbB ... 39 0.11
UniRef50_O45117 Cluster: Ultraspiracle; n=3; Endopterygota|Rep: ... 39 0.11
UniRef50_Q8T7Y2 Cluster: Nuclear orphan receptor; n=1; Bombyx mo... 38 0.15
UniRef50_O77154 Cluster: Nuclear receptor 1; n=2; Ciona intestin... 38 0.15
UniRef50_A7J001 Cluster: Rxr1; n=1; Oikopleura dioica|Rep: Rxr1 ... 38 0.15
UniRef50_O17611 Cluster: Nuclear hormone receptor family member ... 38 0.15
UniRef50_P10734 Cluster: Zygotic gap protein knirps; n=10; Schiz... 38 0.15
UniRef50_P49867 Cluster: Nuclear hormone receptor FTZ-F1; n=4; E... 38 0.15
UniRef50_UPI00015B6336 Cluster: PREDICTED: similar to zinc finge... 38 0.20
UniRef50_UPI0000F21183 Cluster: PREDICTED: similar to Hnf4a prot... 38 0.20
UniRef50_UPI0000DB74D6 Cluster: PREDICTED: similar to nuclear re... 38 0.20
UniRef50_UPI0000DB7437 Cluster: PREDICTED: similar to Knirps-rel... 38 0.20
UniRef50_UPI0000DB7436 Cluster: PREDICTED: similar to Knirps-rel... 38 0.20
UniRef50_Q5RZV7 Cluster: Thyroid hormone receptor beta; n=7; Eut... 38 0.20
UniRef50_Q8MXH2 Cluster: Nuclear hormone receptor family protein... 38 0.20
UniRef50_Q91766 Cluster: Hepatocyte nuclear factor 4-alpha; n=5;... 38 0.20
UniRef50_P49698 Cluster: Hepatocyte nuclear factor 4-alpha; n=41... 38 0.20
UniRef50_P41235 Cluster: Hepatocyte nuclear factor 4-alpha; n=63... 38 0.20
UniRef50_Q2TUT9 Cluster: Nuclear hormone receptor 4A4-like prote... 38 0.26
UniRef50_O61228 Cluster: Thr4 protein; n=2; Tenebrionidae|Rep: T... 38 0.26
UniRef50_O16890 Cluster: Nuclear hormone receptor family protein... 38 0.26
UniRef50_O00482 Cluster: Orphan nuclear receptor NR5A2; n=68; De... 38 0.26
UniRef50_Q4RQL5 Cluster: Chromosome 2 SCAF15004, whole genome sh... 37 0.35
UniRef50_Q9GUI3 Cluster: Nuclear hormone receptor family protein... 37 0.35
UniRef50_Q23038 Cluster: Putative uncharacterized protein; n=1; ... 37 0.35
UniRef50_A7L5U9 Cluster: Thyroid hormone receptor; n=2; Branchio... 37 0.35
UniRef50_Q17771 Cluster: Nuclear hormone receptor family member ... 37 0.35
UniRef50_UPI0000E4834A Cluster: PREDICTED: similar to hormone re... 37 0.46
UniRef50_Q7QCB4 Cluster: ENSANGP00000002992; n=1; Anopheles gamb... 37 0.46
UniRef50_A7SBF2 Cluster: Predicted protein; n=1; Nematostella ve... 37 0.46
UniRef50_P79926 Cluster: Hepatocyte nuclear factor 4-beta; n=7; ... 37 0.46
UniRef50_UPI000155BF1B Cluster: PREDICTED: similar to hepatocyte... 36 0.61
UniRef50_UPI00015A41AD Cluster: UPI00015A41AD related cluster; n... 36 0.61
UniRef50_Q966H7 Cluster: Putative uncharacterized protein; n=3; ... 36 0.61
UniRef50_Q29PL1 Cluster: GA21482-PA; n=1; Drosophila pseudoobscu... 36 0.61
UniRef50_Q17589 Cluster: Putative uncharacterized protein nhr-17... 36 0.61
UniRef50_O96680 Cluster: Dissatisfaction; n=2; Drosophila melano... 36 0.61
UniRef50_O45910 Cluster: Putative uncharacterized protein nhr-23... 36 0.61
UniRef50_O16884 Cluster: Putative uncharacterized protein; n=1; ... 36 0.61
UniRef50_A7MAD6 Cluster: PNR-like; n=2; Aedes aegypti|Rep: PNR-l... 36 0.61
UniRef50_Q9BJK5 Cluster: Nuclear hormone receptor family member ... 36 0.61
UniRef50_Q17370 Cluster: Nuclear hormone receptor family member ... 36 0.61
UniRef50_UPI00015B458D Cluster: PREDICTED: similar to GA10225-PA... 36 0.80
UniRef50_A5WYG8 Cluster: Pregnane X receptor; n=5; Danio rerio|R... 36 0.80
UniRef50_Q95XH8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.80
UniRef50_Q7PQN6 Cluster: ENSANGP00000012911; n=2; Culicidae|Rep:... 36 0.80
UniRef50_Q61KE7 Cluster: Putative uncharacterized protein CBG093... 36 0.80
UniRef50_Q06AL0 Cluster: Estrogen receptor-related receptor; n=1... 36 0.80
UniRef50_A5Z0M1 Cluster: UNC-55a isoform; n=8; Caenorhabditis|Re... 36 0.80
UniRef50_O18141 Cluster: Nuclear hormone receptor family member ... 36 0.80
UniRef50_Q25604 Cluster: Nuclear hormone receptor-like 1; n=1; O... 36 0.80
UniRef50_UPI000155C258 Cluster: PREDICTED: similar to photorecep... 36 1.1
UniRef50_UPI00015A74A9 Cluster: nuclear receptor subfamily 2, gr... 36 1.1
UniRef50_Q617F3 Cluster: Putative uncharacterized protein CBG149... 36 1.1
UniRef50_Q4H3L1 Cluster: Nuclear receptor; n=1; Ciona intestinal... 36 1.1
UniRef50_Q2TUU6 Cluster: Thyroid hormone receptor beta; n=2; Sch... 36 1.1
UniRef50_Q18392 Cluster: Putative uncharacterized protein C33G8.... 36 1.1
UniRef50_Q14EL7 Cluster: FTZ-F1-alpha; n=10; Eumetazoa|Rep: FTZ-... 36 1.1
UniRef50_A5JPH1 Cluster: Estrogen receptor; n=1; Branchiostoma f... 36 1.1
UniRef50_A1ZA02 Cluster: CG16801-PA, isoform A; n=1; Drosophila ... 36 1.1
UniRef50_O02235 Cluster: Nuclear hormone receptor family member ... 36 1.1
UniRef50_UPI00015B595D Cluster: PREDICTED: similar to CG16801-PA... 35 1.4
UniRef50_UPI0000DC039A Cluster: Steroidogenic factor 1 (STF-1) (... 35 1.4
UniRef50_Q9GTC9 Cluster: Nuclear receptor NHR-88; n=3; Caenorhab... 35 1.4
UniRef50_Q7QKA0 Cluster: ENSANGP00000013419; n=3; Culicidae|Rep:... 35 1.4
UniRef50_Q61XA5 Cluster: Putative uncharacterized protein CBG040... 35 1.4
UniRef50_Q61AX8 Cluster: Putative uncharacterized protein CBG135... 35 1.4
UniRef50_Q4H3G7 Cluster: Nuclear receptor; n=1; Ciona intestinal... 35 1.4
UniRef50_Q1RLF6 Cluster: Nuclear receptor; n=2; Ciona intestinal... 35 1.4
UniRef50_A7SVT5 Cluster: Predicted protein; n=2; Actiniaria|Rep:... 35 1.4
UniRef50_A7SD88 Cluster: Predicted protein; n=4; Eumetazoa|Rep: ... 35 1.4
UniRef50_P18119 Cluster: Thyroid hormone receptor beta-B; n=19; ... 35 1.4
UniRef50_Q13285 Cluster: Steroidogenic factor 1; n=59; Euteleost... 35 1.4
UniRef50_O02151 Cluster: Nuclear hormone receptor family member ... 35 1.4
UniRef50_P41999 Cluster: Nuclear hormone receptor family member ... 35 1.4
UniRef50_Q6Q6F3 Cluster: Estrogen-related receptor delta; n=3; D... 35 1.9
UniRef50_O42550 Cluster: PPARG; n=12; Clupeocephala|Rep: PPARG -... 35 1.9
UniRef50_Q9VI12 Cluster: CG10296-PA; n=2; Sophophora|Rep: CG1029... 35 1.9
UniRef50_Q9GTG3 Cluster: Nuclear receptor NHR-50; n=2; Caenorhab... 35 1.9
UniRef50_Q95YJ6 Cluster: Nuclear receptor 1; n=1; Ciona savignyi... 35 1.9
UniRef50_Q61R49 Cluster: Putative uncharacterized protein CBG067... 35 1.9
UniRef50_Q21700 Cluster: Putative uncharacterized protein nhr-20... 35 1.9
UniRef50_Q1RL97 Cluster: Nuclear receptor; n=2; Ciona intestinal... 35 1.9
UniRef50_A7S8Y8 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.9
UniRef50_A7LPI6 Cluster: Putative uncharacterized protein; n=2; ... 35 1.9
UniRef50_Q94407 Cluster: Nuclear hormone receptor family member ... 35 1.9
UniRef50_Q9XTJ4 Cluster: Nuclear hormone receptor family member ... 35 1.9
UniRef50_Q800U8 Cluster: Ff1d; n=5; Clupeocephala|Rep: Ff1d - Da... 34 2.4
UniRef50_O73631 Cluster: TFZR1; n=3; Euteleostei|Rep: TFZR1 - On... 34 2.4
UniRef50_Q6VA69 Cluster: EcRA; n=12; Pancrustacea|Rep: EcRA - Ae... 34 2.4
UniRef50_O16664 Cluster: Putative uncharacterized protein T27B7.... 34 2.4
UniRef50_P11473 Cluster: Vitamin D3 receptor; n=61; Euteleostomi... 34 2.4
UniRef50_O45460 Cluster: Nuclear hormone receptor family member ... 34 2.4
UniRef50_Q21006 Cluster: Nuclear hormone receptor family member ... 34 2.4
UniRef50_O45521 Cluster: Nuclear hormone receptor family member ... 34 2.4
UniRef50_P34021 Cluster: Ecdysone receptor; n=44; Coelomata|Rep:... 34 2.4
UniRef50_P49881 Cluster: Ecdysone receptor; n=4; Bombyx mori|Rep... 34 2.4
UniRef50_UPI0000E4899F Cluster: PREDICTED: hypothetical protein,... 34 3.2
UniRef50_UPI0000D56354 Cluster: PREDICTED: similar to photorecep... 34 3.2
UniRef50_Q95Y09 Cluster: Nuclear hormone receptor family protein... 34 3.2
UniRef50_Q5XTR0 Cluster: Estrogen receptor-related receptor long... 34 3.2
UniRef50_Q4H2N0 Cluster: Nuclear receptor; n=1; Ciona intestinal... 34 3.2
UniRef50_Q2TUU7 Cluster: Thyroid hormone receptor alpha; n=5; Sc... 34 3.2
UniRef50_Q16IU3 Cluster: Estrogen-related receptor; n=1; Aedes a... 34 3.2
UniRef50_O97120 Cluster: Retinoic acid receptor RXR; n=1; Schist... 34 3.2
UniRef50_O16961 Cluster: Nuclear hormone receptor family protein... 34 3.2
UniRef50_A7S1X5 Cluster: Predicted protein; n=1; Nematostella ve... 34 3.2
UniRef50_A7RZU0 Cluster: Predicted protein; n=1; Nematostella ve... 34 3.2
UniRef50_O95718 Cluster: Steroid hormone receptor ERR2; n=108; C... 34 3.2
UniRef50_P11474 Cluster: Steroid hormone receptor ERR1; n=19; Eu... 34 3.2
UniRef50_UPI0000D5787F Cluster: PREDICTED: similar to CG10296-PA... 33 4.3
UniRef50_Q8WS79 Cluster: Estrogen-related receptor splice varian... 33 4.3
UniRef50_O01448 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_O45436 Cluster: Nuclear hormone receptor family member ... 33 4.3
UniRef50_UPI0000D5764D Cluster: PREDICTED: similar to CG11783-PA... 33 5.7
UniRef50_Q95Y05 Cluster: Nuclear hormone receptor family protein... 33 5.7
UniRef50_Q86PK8 Cluster: Nuclear receptor NHR-32; n=2; Caenorhab... 33 5.7
UniRef50_Q61UK4 Cluster: Putative uncharacterized protein CBG052... 33 5.7
UniRef50_Q611G9 Cluster: Putative uncharacterized protein CBG170... 33 5.7
UniRef50_Q2L3W9 Cluster: Nuclear receptor; n=9; Arthropoda|Rep: ... 33 5.7
UniRef50_O44337 Cluster: AamEcRA1; n=2; Amblyomma americanum|Rep... 33 5.7
UniRef50_A4F2F2 Cluster: Ecdysone receptor A1; n=11; Arthropoda|... 33 5.7
UniRef50_Q0D1T2 Cluster: Valyl-tRNA synthetase, mitochondrial; n... 33 5.7
UniRef50_Q18192 Cluster: Nuclear hormone receptor family member ... 33 5.7
UniRef50_Q9DFH3 Cluster: Xenobiotic receptor; n=4; Amniota|Rep: ... 33 7.5
UniRef50_Q95QT4 Cluster: Putative uncharacterized protein nhr-13... 33 7.5
UniRef50_Q18896 Cluster: Nuclear hormone receptor family protein... 33 7.5
UniRef50_Q18150 Cluster: Nuclear hormone receptor family protein... 33 7.5
UniRef50_P91829 Cluster: Nuclear hormone receptor family member ... 33 7.5
UniRef50_Q19345 Cluster: Nuclear hormone receptor family member ... 33 7.5
UniRef50_Q23294 Cluster: Nuclear hormone receptor family member ... 33 7.5
UniRef50_UPI00015B40B5 Cluster: PREDICTED: similar to ENSANGP000... 32 9.9
UniRef50_UPI0000DB70A8 Cluster: PREDICTED: similar to estrogen-r... 32 9.9
UniRef50_O75469-6 Cluster: Isoform 2C of O75469 ; n=10; Tetrapod... 32 9.9
UniRef50_Q5LU25 Cluster: Putative uncharacterized protein; n=2; ... 32 9.9
UniRef50_A3VU60 Cluster: Putative para-aminobenzoate synthase; n... 32 9.9
UniRef50_Q9XZJ5 Cluster: Nuclear hormone receptor of the steroid... 32 9.9
UniRef50_Q9UAN6 Cluster: Nuclear receptor NHR-21a; n=7; Caenorha... 32 9.9
UniRef50_Q9GTC6 Cluster: Nuclear receptor NHR-92; n=5; Caenorhab... 32 9.9
UniRef50_O45905 Cluster: Putative uncharacterized protein nhr-23... 32 9.9
UniRef50_O17991 Cluster: Putative uncharacterized protein nhr-26... 32 9.9
UniRef50_O75469 Cluster: Orphan nuclear receptor PXR; n=32; Ther... 32 9.9
>UniRef50_P50239 Cluster: Ecdysone-inducible protein E75; n=17;
Endopterygota|Rep: Ecdysone-inducible protein E75 -
Galleria mellonella (Wax moth)
Length = 711
Score = 147 bits (355), Expect = 3e-34
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM QSS++RAHEQAAAAELDD PR
Sbjct: 98 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-QSSTTRAHEQAAAAELDDGPR 156
Query: 525 LLARVVRAHLDTCEF 569
LLARVVRAHLDTCEF
Sbjct: 157 LLARVVRAHLDTCEF 171
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQQKIQYRPCTKNQQCSILRINR
Sbjct: 63 SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 97
>UniRef50_Q0JRL0 Cluster: Ecdysone-induced protein 75C; n=8;
Coelomata|Rep: Ecdysone-induced protein 75C - Aedes
aegypti (Yellowfever mosquito)
Length = 1134
Score = 136 bits (328), Expect = 5e-31
Identities = 62/75 (82%), Positives = 69/75 (92%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS+ +R +++A A ELDD PR
Sbjct: 315 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGNQRALATELDDQPR 374
Query: 525 LLARVVRAHLDTCEF 569
LLA V+RAH+DTCEF
Sbjct: 375 LLAAVLRAHMDTCEF 389
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQQKIQYRPCTKNQQCSILRINR
Sbjct: 280 SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 314
>UniRef50_P13055 Cluster: Ecdysone-induced protein 75B isoform B;
n=10; Coelomata|Rep: Ecdysone-induced protein 75B
isoform B - Drosophila melanogaster (Fruit fly)
Length = 1412
Score = 134 bits (325), Expect = 1e-30
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS+ +R ++A A ELDD PR
Sbjct: 509 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPR 568
Query: 525 LLARVVRAHLDTCEF 569
LLA V+RAHL+TCEF
Sbjct: 569 LLAAVLRAHLETCEF 583
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQQKIQYRPCTKNQQCSILRINR
Sbjct: 474 SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 508
>UniRef50_Q3I5Q8 Cluster: E75 nuclear receptor; n=1; Gecarcinus
lateralis|Rep: E75 nuclear receptor - Gecarcinus
lateralis (Blackback land crab)
Length = 828
Score = 119 bits (287), Expect = 5e-26
Identities = 55/75 (73%), Positives = 66/75 (88%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKA+ILAAM QS ++R+ E+A AEL+D R
Sbjct: 83 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAKILAAM-QSVNARSQERAVLAELEDDTR 141
Query: 525 LLARVVRAHLDTCEF 569
+ A ++RAH+DTC+F
Sbjct: 142 VTAAIIRAHMDTCDF 156
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQQKIQYRPCTKNQQCSILRINR
Sbjct: 48 SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 82
>UniRef50_O77245 Cluster: Nuclear hormone receptor E75; n=9;
Coelomata|Rep: Nuclear hormone receptor E75 -
Metapenaeus ensis (Greasyback shrimp) (Sand shrimp)
Length = 606
Score = 118 bits (284), Expect = 1e-25
Identities = 54/75 (72%), Positives = 66/75 (88%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKA+ILAAM QS ++++ E+A AEL+D R
Sbjct: 83 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAKILAAM-QSVNAKSQERAVLAELEDDTR 141
Query: 525 LLARVVRAHLDTCEF 569
+ A ++RAH+DTC+F
Sbjct: 142 VTAAIIRAHMDTCDF 156
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQQKIQYRPCTKNQQCSILRINR
Sbjct: 48 SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 82
>UniRef50_Q9XUK7 Cluster: Nuclear hormone receptor family member
nhr-85; n=3; Caenorhabditis|Rep: Nuclear hormone
receptor family member nhr-85 - Caenorhabditis elegans
Length = 514
Score = 79.0 bits (186), Expect = 9e-14
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 6/98 (6%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQ CRLKKC+AVGMSRDAVRFGRVPKREKAR+ MQ+++ +Q A + ++
Sbjct: 164 NRCQCCRLKKCLAVGMSRDAVRFGRVPKREKARMFEEMQKTNVQSQRDQ-IAIQYENLTE 222
Query: 525 LLARV------VRAHLDTCEFHA*SRRFHASQSFVTVP 620
++ ++ ++A L+ C + R + +F+ +P
Sbjct: 223 VMHKINQAFGTLQATLEKCTGPIYTDRCPITSNFIVIP 260
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQKI YR CT+ + C ILR NR
Sbjct: 134 KGFFRRSIQQKITYRACTRAEDCLILRNNR 163
>UniRef50_Q4RW38 Cluster: Chromosome 9 SCAF14991, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 9
SCAF14991, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 539
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521
NRCQ+CR KKC++VGMSRDAVRFGR+PKREK R+L MQ +S ++A E+D P
Sbjct: 100 NRCQHCRFKKCLSVGMSRDAVRFGRIPKREKQRLLEEMQSYMNSL--NESAVMEMDSCP 156
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
QGFFRRSIQQ I Y+ C KN+ C I+R+NR
Sbjct: 70 QGFFRRSIQQNINYKMCVKNENCLIMRMNR 99
>UniRef50_P20393 Cluster: Orphan nuclear receptor NR1D1; n=25;
Theria|Rep: Orphan nuclear receptor NR1D1 - Homo sapiens
(Human)
Length = 614
Score = 77.4 bits (182), Expect = 3e-13
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521
NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+LA MQ + + ++ ++ L+ +P
Sbjct: 183 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLETSP 241
Score = 53.2 bits (122), Expect = 5e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ IQY+ C KN+ CSI+RINR
Sbjct: 153 KGFFRRSIQQNIQYKRCLKNENCSIVRINR 182
>UniRef50_Q6TNS3 Cluster: Nuclear receptor subfamily 1, group D,
member 1; n=8; Clupeocephala|Rep: Nuclear receptor
subfamily 1, group D, member 1 - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 637
Score = 76.2 bits (179), Expect = 6e-13
Identities = 32/49 (65%), Positives = 40/49 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+LA MQ + ++ + Q
Sbjct: 179 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQNAMNNMVNNQ 227
Score = 52.4 bits (120), Expect = 9e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ IQY+ C KN+ C+I+RINR
Sbjct: 149 KGFFRRSIQQNIQYKKCLKNETCTIMRINR 178
>UniRef50_Q4RXZ3 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 11
SCAF14979, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 720
Score = 76.2 bits (179), Expect = 6e-13
Identities = 34/59 (57%), Positives = 46/59 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521
NRCQ+CR KKC+AVGMSRDAVRFGR+PKREK R+L MQ +S ++A+ +++ +P
Sbjct: 292 NRCQHCRFKKCLAVGMSRDAVRFGRIPKREKQRLLDEMQSYMNSL--NESASVDMEMSP 348
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = +2
Query: 224 RDSTKCSCDPQGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
R S S PQGFFRRSIQQ I Y+ C KN++C I+R+NR
Sbjct: 252 RCSESFSSLPQGFFRRSIQQNIHYKMCVKNEKCLIMRMNR 291
>UniRef50_UPI0000F1EFB0 Cluster: PREDICTED: similar to Rev-Erb beta
1; n=1; Danio rerio|Rep: PREDICTED: similar to Rev-Erb
beta 1 - Danio rerio
Length = 504
Score = 73.3 bits (172), Expect = 4e-12
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
+T S + NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L MQ + ++
Sbjct: 125 KTESCTIVRINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLLEMQTAMNN 180
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ IQY+ C K + C+I+RINR
Sbjct: 107 KGFFRRSIQQNIQYKKCLKTESCTIVRINR 136
>UniRef50_Q90Z65 Cluster: Rev-Erb beta 1; n=5; Euteleostomi|Rep:
Rev-Erb beta 1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 404
Score = 73.3 bits (172), Expect = 4e-12
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
+T S + NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L MQ + ++
Sbjct: 41 KTESCTIVRINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLLEMQTAMNN 96
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ IQY+ C K + C+I+RINR
Sbjct: 23 KGFFRRSIQQNIQYKKCLKTESCTIVRINR 52
>UniRef50_Q1L684 Cluster: Rev-erbgamma-A; n=7; Clupeocephala|Rep:
Rev-erbgamma-A - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 462
Score = 73.3 bits (172), Expect = 4e-12
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
NRCQ+CR KKC++VGMSRDAVRFGR+PKREK R+L MQ +S
Sbjct: 57 NRCQHCRFKKCLSVGMSRDAVRFGRIPKREKQRLLDEMQSYMNS 100
Score = 48.4 bits (110), Expect = 1e-04
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ I Y+ C KN+ C I+R+NR
Sbjct: 27 KGFFRRSIQQNINYKMCVKNENCLIMRMNR 56
>UniRef50_Q14995 Cluster: Orphan nuclear receptor NR1D2; n=48;
Euteleostomi|Rep: Orphan nuclear receptor NR1D2 - Homo
sapiens (Human)
Length = 579
Score = 73.3 bits (172), Expect = 4e-12
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L MQ + + + Q
Sbjct: 154 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ 202
Score = 52.8 bits (121), Expect = 7e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ IQY+ C KN+ CSI+R+NR
Sbjct: 124 KGFFRRSIQQNIQYKKCLKNENCSIMRMNR 153
>UniRef50_Q90Z63 Cluster: Rev-Erb beta; n=3; Euteleostei|Rep:
Rev-Erb beta - Oncorhynchus mykiss (Rainbow trout)
(Salmo gairdneri)
Length = 461
Score = 72.1 bits (169), Expect = 1e-11
Identities = 30/44 (68%), Positives = 37/44 (84%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
NRCQ CR KKC+AVGMSRD+VRFGR+PKREK R+L MQ + ++
Sbjct: 28 NRCQQCRFKKCLAVGMSRDSVRFGRIPKREKQRMLLEMQNAMNN 71
Score = 38.3 bits (85), Expect = 0.15
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 263 FRRSIQQKIQYRPCTKNQQCSILRINR 343
FRRSIQ +Y+ C K + C+++RINR
Sbjct: 1 FRRSIQHSTRYKKCLKMENCTVIRINR 27
>UniRef50_UPI00004D0DA7 Cluster: Orphan nuclear receptor NR1D2
(Rev-erb-beta) (EAR-1R) (Orphan nuclear hormone receptor
BD73).; n=1; Xenopus tropicalis|Rep: Orphan nuclear
receptor NR1D2 (Rev-erb-beta) (EAR-1R) (Orphan nuclear
hormone receptor BD73). - Xenopus tropicalis
Length = 571
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRD--AVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDD 515
NRCQ CR KKC++VGMSRD AVRFGR+PKREK R+L MQ + Q + + L +
Sbjct: 168 NRCQQCRFKKCLSVGMSRDATAVRFGRIPKREKQRMLIEMQTVMKTMMSNQFSGSSLQE 226
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ IQY+ C KN+ CSI+RINR
Sbjct: 138 KGFFRRSIQQNIQYKKCLKNESCSIIRINR 167
>UniRef50_A7LC92 Cluster: Nuclear receptor; n=2; Onchocercidae|Rep:
Nuclear receptor - Brugia malayi (Filarial nematode
worm)
Length = 656
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/73 (45%), Positives = 46/73 (63%)
Frame = +3
Query: 300 PARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSR 479
P R+ + + NRCQ+CRL+KCI VGMSR+AVRFGRVPK EK R+ + + ++R
Sbjct: 209 PCTRSQQCIVARNNRNRCQHCRLQKCIRVGMSREAVRFGRVPKHEKVRMAEELAR-VTAR 267
Query: 480 AHEQAAAAELDDA 518
A + L D+
Sbjct: 268 TLTDAVQSALTDS 280
Score = 56.0 bits (129), Expect = 7e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQKIQYRPCT++QQC + R NR
Sbjct: 194 KGFFRRSIQQKIQYRPCTRSQQCIVARNNR 223
>UniRef50_UPI0000588E36 Cluster: PREDICTED: similar to peroxisome
proliferator activated receptor; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to peroxisome
proliferator activated receptor - Strongylocentrotus
purpuratus
Length = 378
Score = 66.1 bits (154), Expect = 7e-10
Identities = 29/74 (39%), Positives = 43/74 (58%)
Frame = +3
Query: 288 YNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS 467
Y P +T + T N+CQYCR +KC+ VGMS DA RFGR+P+ E+ R+L ++
Sbjct: 58 YKPCPFVKTEPCKINIATRNKCQYCRFQKCMQVGMSHDASRFGRMPREERLRLLEELKDE 117
Query: 468 SSSRAHEQAAAAEL 509
+ E+ AE+
Sbjct: 118 ETEATEEEKHRAEI 131
>UniRef50_Q4H2X6 Cluster: Nuclear receptor; n=3; Ciona
intestinalis|Rep: Nuclear receptor - Ciona intestinalis
(Transparent sea squirt)
Length = 644
Score = 64.5 bits (150), Expect = 2e-09
Identities = 23/43 (53%), Positives = 36/43 (83%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473
N+CQ+CR KKC+ +GMSRDA+RFGR+P+ EK +I+ +++ S+
Sbjct: 98 NKCQFCRFKKCVGLGMSRDAIRFGRMPRHEKQQIIQEIEKKSN 140
>UniRef50_UPI0000D55BCD Cluster: PREDICTED: similar to CG18023-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG18023-PA, isoform A - Tribolium castaneum
Length = 363
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/74 (39%), Positives = 45/74 (60%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRL 527
RCQYCR KKC++VGMSRD+VR+GRVPKR + R + +++ A + + + +
Sbjct: 51 RCQYCRFKKCLSVGMSRDSVRYGRVPKRSRERSTEESSRVTTTDADQSDSETKQLAVYDV 110
Query: 528 LARVVRAHLDTCEF 569
+ V +AH C +
Sbjct: 111 ILTVSQAHHANCGY 124
>UniRef50_P45447 Cluster: Ecdysone-induced protein 78C; n=5;
Diptera|Rep: Ecdysone-induced protein 78C - Drosophila
melanogaster (Fruit fly)
Length = 866
Score = 63.7 bits (148), Expect = 3e-09
Identities = 32/61 (52%), Positives = 41/61 (67%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDD 515
L NRCQYCR KKC++ GMSRD+VR+GRVPKR + AA +SS A A+ +DD
Sbjct: 414 LNRNRCQYCRFKKCLSAGMSRDSVRYGRVPKRSRELNGAA----ASSAAAGAPASLNVDD 469
Query: 516 A 518
+
Sbjct: 470 S 470
Score = 41.5 bits (93), Expect = 0.016
Identities = 18/35 (51%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQ++I+YR C ++ +C ++R+NR
Sbjct: 383 SCEGCKGFFRRSIQKQIEYR-CLRDGKCLVIRLNR 416
>UniRef50_A7MAD3 Cluster: Ecdysone-induced protein 78C; n=3;
Endopterygota|Rep: Ecdysone-induced protein 78C - Aedes
aegypti (Yellowfever mosquito)
Length = 431
Score = 63.3 bits (147), Expect = 5e-09
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
L NRCQYCR KKC+AVGMSRD+VR+GRVPK+ +
Sbjct: 73 LNRNRCQYCRFKKCLAVGMSRDSVRYGRVPKKSR 106
Score = 41.5 bits (93), Expect = 0.016
Identities = 18/35 (51%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQ++I+YR C ++ +C ++R+NR
Sbjct: 42 SCEGCKGFFRRSIQKQIEYR-CLRDGKCLVIRLNR 75
>UniRef50_Q4H2V7 Cluster: Nuclear receptor; n=1; Ciona
intestinalis|Rep: Nuclear receptor - Ciona intestinalis
(Transparent sea squirt)
Length = 597
Score = 62.9 bits (146), Expect = 6e-09
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = +3
Query: 285 RYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
+Y + RT S+ + NRCQ CR KC+ VGMS+DAV++GR+PK++KAR++A
Sbjct: 80 KYRSCILDRTCSITK--INRNRCQTCRFMKCLYVGMSKDAVKYGRIPKKQKARLIA 133
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/35 (57%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRR+I QKI+YR C ++ CSI +INR
Sbjct: 63 SCEGCKGFFRRTIHQKIKYRSCILDRTCSITKINR 97
>UniRef50_P51449 Cluster: Nuclear receptor ROR-gamma; n=34;
Amniota|Rep: Nuclear receptor ROR-gamma - Homo sapiens
(Human)
Length = 518
Score = 62.9 bits (146), Expect = 6e-09
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ R +Q
Sbjct: 81 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 129
>UniRef50_P35398 Cluster: Nuclear receptor ROR-alpha; n=84;
Euteleostomi|Rep: Nuclear receptor ROR-alpha - Homo
sapiens (Human)
Length = 556
Score = 62.5 bits (145), Expect = 8e-09
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++ + A +Q+ R H+Q
Sbjct: 156 NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 207
>UniRef50_Q2LYQ2 Cluster: GA14768-PA; n=1; Drosophila
pseudoobscura|Rep: GA14768-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 729
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/62 (48%), Positives = 38/62 (61%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDD 515
L NRCQYCR KKC++ GMSRD+VR+GRVPKR + + A + S A + L
Sbjct: 323 LNRNRCQYCRFKKCLSAGMSRDSVRYGRVPKRSR-ELNGAGSTAGGSGATSTSGCPLLAG 381
Query: 516 AP 521
AP
Sbjct: 382 AP 383
Score = 41.5 bits (93), Expect = 0.016
Identities = 18/35 (51%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQ++I+YR C ++ +C ++R+NR
Sbjct: 292 SCEGCKGFFRRSIQKQIEYR-CLRDGKCLVIRLNR 325
>UniRef50_P41828 Cluster: Nuclear hormone receptor family member
nhr-23; n=7; Caenorhabditis|Rep: Nuclear hormone
receptor family member nhr-23 - Caenorhabditis elegans
Length = 588
Score = 62.1 bits (144), Expect = 1e-08
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
R + V + NRCQYCRLKKCI +GMSRDAV+FGR+ K+++ ++
Sbjct: 201 RQKNCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGRMSKKQREKV 246
>UniRef50_Q4RV24 Cluster: Chromosome 15 SCAF14992, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 15 SCAF14992, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 547
Score = 61.7 bits (143), Expect = 1e-08
Identities = 24/45 (53%), Positives = 37/45 (82%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSR 479
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ S+
Sbjct: 58 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKSQ 102
>UniRef50_A1DYE6 Cluster: Nuclear receptor-like protein; n=1;
Trichinella spiralis|Rep: Nuclear receptor-like protein
- Trichinella spiralis (Trichina worm)
Length = 358
Score = 61.7 bits (143), Expect = 1e-08
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRD-----AVRFGRVPKREKARILAAMQQSSSSRAHEQAAA 500
L NRCQYCR KKC+AVGMSRD AVR+GRVPKR + R+ ++ +S + E
Sbjct: 176 LNRNRCQYCRFKKCLAVGMSRDFAFFSAVRYGRVPKRSRDRMQEDVRVTSMTGESEVDNE 235
Query: 501 AELDDAP--RLLARVVRAHLDTCEF 569
E ++ V +AH C +
Sbjct: 236 VEKHQLALYDIILSVSQAHHSNCNY 260
Score = 40.3 bits (90), Expect = 0.037
Identities = 18/35 (51%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQ++I+YR C ++ +C + R+NR
Sbjct: 145 SCEGCKGFFRRSIQKQIEYR-CLRDGKCLVYRLNR 178
>UniRef50_P37231 Cluster: Peroxisome proliferator-activated receptor
gamma; n=97; Craniata|Rep: Peroxisome
proliferator-activated receptor gamma - Homo sapiens
(Human)
Length = 505
Score = 61.7 bits (143), Expect = 1e-08
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA + E A
Sbjct: 188 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 237
>UniRef50_UPI0000F21513 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 433
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/63 (46%), Positives = 42/63 (66%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQ CRLKKC+A GMSRDAV+FGR+ KR++ + A +++ R H++ A + +
Sbjct: 61 NRCQSCRLKKCVAQGMSRDAVKFGRMSKRQRDSLFAEVER---HRQHQRLQANSVQEPQP 117
Query: 525 LLA 533
L A
Sbjct: 118 LQA 120
>UniRef50_Q1L678 Cluster: RORgamma-B; n=13; Euteleostomi|Rep:
RORgamma-B - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 480
Score = 61.3 bits (142), Expect = 2e-08
Identities = 24/40 (60%), Positives = 35/40 (87%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ 464
NRCQ+CRL+KC+A+GMSRDAVRFGR+ K+++ + A +Q+
Sbjct: 60 NRCQHCRLQKCLALGMSRDAVRFGRMSKKQRDSLYAEVQR 99
>UniRef50_UPI0000F2CB6C Cluster: PREDICTED: similar to
beta-1,4-N-acetyl-galactosaminyl transferase 1,; n=1;
Monodelphis domestica|Rep: PREDICTED: similar to
beta-1,4-N-acetyl-galactosaminyl transferase 1, -
Monodelphis domestica
Length = 557
Score = 60.9 bits (141), Expect = 2e-08
Identities = 24/50 (48%), Positives = 39/50 (78%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ ++ Q+
Sbjct: 149 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQRHQQNQEAGQS 198
>UniRef50_P31396 Cluster: Probable nuclear hormone receptor HR3;
n=21; Protostomia|Rep: Probable nuclear hormone receptor
HR3 - Drosophila melanogaster (Fruit fly)
Length = 487
Score = 60.9 bits (141), Expect = 2e-08
Identities = 29/71 (40%), Positives = 41/71 (57%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R V + NRCQYCRL+KC+ +GMSRDAV+FGR+ K+++ ++ R H
Sbjct: 89 RNKQCVVDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKKQREKV------EDEVRFHR 142
Query: 489 QAAAAELDDAP 521
A+ D AP
Sbjct: 143 AQMRAQSDAAP 153
Score = 34.3 bits (75), Expect = 2.4
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRS + Y+ C +N+QC + R+NR
Sbjct: 72 KGFFRRSQSSVVNYQ-CPRNKQCVVDRVNR 100
>UniRef50_UPI0000584695 Cluster: PREDICTED: similar to
ecdysone-induced protein 75b; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ecdysone-induced
protein 75b - Strongylocentrotus purpuratus
Length = 356
Score = 60.5 bits (140), Expect = 3e-08
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCRLKKC+AVGMS+DAVR GR PK+ K
Sbjct: 64 NRCQYCRLKKCLAVGMSKDAVRLGRCPKKCK 94
Score = 46.8 bits (106), Expect = 4e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ ++YR C+K +C I+RINR
Sbjct: 34 KGFFRRSIQHNVKYRVCSKGDECLIMRINR 63
>UniRef50_Q90Z66 Cluster: Peroxisome proliferator-activated receptor
beta 2; n=21; Clupeocephala|Rep: Peroxisome
proliferator-activated receptor beta 2 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 368
Score = 60.5 bits (140), Expect = 3e-08
Identities = 21/38 (55%), Positives = 33/38 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM 458
N+CQYCR +KC+A+GMS DA+R+GR+P+ EK +++A +
Sbjct: 52 NKCQYCRFQKCLALGMSHDAIRYGRMPEAEKKKLVAGL 89
>UniRef50_Q0KFU8 Cluster: HR3 isoform B1; n=3; Blattella
germanica|Rep: HR3 isoform B1 - Blattella germanica
(German cockroach)
Length = 651
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + V + NRCQYCRL+KC+ +GMSRDAV+FGR+ K+++ ++ R H
Sbjct: 120 RNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKV------EDEVRFHR 173
Query: 489 QAAAAELDDAP 521
A+ + AP
Sbjct: 174 AQLRAQTETAP 184
Score = 32.3 bits (70), Expect = 9.9
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRS + Y+ C +N+ C + R+NR
Sbjct: 103 KGFFRRSQSSVVNYQ-CPRNKNCVVDRVNR 131
>UniRef50_Q967S3 Cluster: Nuclear receptor nhr-7A; n=4;
Onchocercidae|Rep: Nuclear receptor nhr-7A - Dirofilaria
immitis (Canine heartworm)
Length = 556
Score = 60.1 bits (139), Expect = 4e-08
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKR---EKARILAAMQQSSSSRAHEQAAAAE 506
L NRCQ+CR +KC+AVGMSRD+VR+GR P+R E + +S H + A
Sbjct: 210 LNRNRCQFCRFRKCLAVGMSRDSVRYGRTPRRKGDETDNENVPSWEETSKFTHYEIADIA 269
Query: 507 LDDAPRLLARVVRAHLDTCEF 569
+ V AH C +
Sbjct: 270 NSRLRNFIESVAEAHTTCCSY 290
Score = 38.3 bits (85), Expect = 0.15
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ++++YR C ++ +C I R+NR
Sbjct: 184 KGFFRRSIQKQMEYR-CLRDGKCHIHRLNR 212
>UniRef50_UPI0000E481C8 Cluster: PREDICTED: similar to nuclear
hormone receptor E75; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to nuclear hormone
receptor E75 - Strongylocentrotus purpuratus
Length = 742
Score = 59.3 bits (137), Expect = 8e-08
Identities = 24/43 (55%), Positives = 35/43 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473
N+CQ CRL+KCI +GMS++AVRFGR+ KREK ++ M++ S+
Sbjct: 103 NQCQSCRLRKCILMGMSKNAVRFGRMSKREKMKLTQVMKEISN 145
Score = 39.9 bits (89), Expect = 0.049
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRR++Q + YRPC +C I R NR
Sbjct: 68 SCEGCKGFFRRTVQHNLTYRPCPNGGKCVIQRKNR 102
>UniRef50_Q9BWQ7 Cluster: Peroxisome proliferator-activated receptor
alpha; n=15; Euteleostomi|Rep: Peroxisome
proliferator-activated receptor alpha - Homo sapiens
(Human)
Length = 258
Score = 59.3 bits (137), Expect = 8e-08
Identities = 22/36 (61%), Positives = 31/36 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
N+CQYCR KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186
>UniRef50_Q07869 Cluster: Peroxisome proliferator-activated receptor
alpha; n=113; Gnathostomata|Rep: Peroxisome
proliferator-activated receptor alpha - Homo sapiens
(Human)
Length = 468
Score = 59.3 bits (137), Expect = 8e-08
Identities = 22/36 (61%), Positives = 31/36 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
N+CQYCR KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186
>UniRef50_UPI0000EB467C Cluster: UPI0000EB467C related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB467C UniRef100
entry - Canis familiaris
Length = 501
Score = 58.4 bits (135), Expect = 1e-07
Identities = 22/40 (55%), Positives = 35/40 (87%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ 464
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +++
Sbjct: 59 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVKK 98
>UniRef50_Q90Y02 Cluster: Peroxisome proliferator-activated
receptor; n=1; Petromyzon marinus|Rep: Peroxisome
proliferator-activated receptor - Petromyzon marinus
(Sea lamprey)
Length = 436
Score = 58.4 bits (135), Expect = 1e-07
Identities = 21/36 (58%), Positives = 31/36 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
N+CQ+CR +KC+ VGMS +A+RFGR+P+ EK R++A
Sbjct: 13 NKCQHCRFQKCLGVGMSHEAIRFGRMPQAEKKRLIA 48
>UniRef50_Q4RVW1 Cluster: Chromosome 9 SCAF14991, whole genome
shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 9
SCAF14991, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 463
Score = 58.4 bits (135), Expect = 1e-07
Identities = 20/43 (46%), Positives = 34/43 (79%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473
N+CQYCR +KC+++GMS DA+R+GR+P+ E+ +++A + S
Sbjct: 79 NKCQYCRFQKCLSLGMSHDAIRYGRMPEAERKKLVAGLLAEES 121
>UniRef50_Q4H2V2 Cluster: Nuclear receptor; n=2; Ciona
intestinalis|Rep: Nuclear receptor - Ciona intestinalis
(Transparent sea squirt)
Length = 802
Score = 58.4 bits (135), Expect = 1e-07
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAE 506
NRCQ+CRL+KC+ GMS+DAV+FGR+ K+++ R+ + + RA + +E
Sbjct: 215 NRCQHCRLQKCLRAGMSKDAVKFGRMSKKQRDRLYLEVLKQQQMRAGQPQVESE 268
>UniRef50_O02643 Cluster: Hormone receptor 3C; n=1; Choristoneura
fumiferana|Rep: Hormone receptor 3C - Choristoneura
fumiferana (Spruce budworm)
Length = 651
Score = 58.0 bits (134), Expect = 2e-07
Identities = 22/46 (47%), Positives = 34/46 (73%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
R + V + NRCQYCRL+KC+ +GM RDAV+FGR+ K+++ ++
Sbjct: 72 RNKACVVDRVNRNRCQYCRLQKCLKLGMRRDAVKFGRMSKKQREKV 117
>UniRef50_Q2TUU3 Cluster: Ecdysone-induced protein E78; n=3;
Schistosoma|Rep: Ecdysone-induced protein E78 -
Schistosoma mansoni (Blood fluke)
Length = 591
Score = 57.6 bits (133), Expect = 2e-07
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
L NRCQYCR +KC+A GMS+D+VR+GR+P+R +
Sbjct: 336 LNRNRCQYCRFRKCLAAGMSKDSVRYGRMPRRTR 369
Score = 40.3 bits (90), Expect = 0.037
Identities = 17/35 (48%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQ++I+Y+ C ++ +C ++R+NR
Sbjct: 305 SCEGCKGFFRRSIQKQIEYK-CLRDGKCLVIRLNR 338
>UniRef50_Q4SHA3 Cluster: Chromosome 19 SCAF14584, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 19 SCAF14584, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 500
Score = 56.8 bits (131), Expect = 4e-07
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
N+CQYCR KC++VGMS +A+RFGR+P+ EK ++ A
Sbjct: 139 NKCQYCRFHKCLSVGMSHNAIRFGRMPQAEKLKLKA 174
>UniRef50_UPI0000E494CA Cluster: PREDICTED: similar to peroxisome
proliferator-activated receptor alpha; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
peroxisome proliferator-activated receptor alpha -
Strongylocentrotus purpuratus
Length = 504
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +3
Query: 321 VVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473
+V+ G T N+CQYCR +KCI +GMS AVR GRVPK E ++ + + +
Sbjct: 155 IVNIG-TRNKCQYCRYQKCIILGMSSTAVRMGRVPKVEVLKLKTELDEKDN 204
>UniRef50_Q4SGI2 Cluster: Chromosome undetermined SCAF14594, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14594, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 588
Score = 52.8 bits (121), Expect = 7e-06
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = +2
Query: 227 DSTKCSCDPQGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
D + S QGFFRRSIQQ IQY+ C K++ C+I+RINR
Sbjct: 18 DLSPSSRRQQGFFRRSIQQNIQYKKCLKSESCAIMRINR 56
>UniRef50_UPI0000586F42 Cluster: PREDICTED: similar to GA17350-PA;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to GA17350-PA - Strongylocentrotus purpuratus
Length = 573
Score = 52.4 bits (120), Expect = 9e-06
Identities = 25/52 (48%), Positives = 33/52 (63%)
Frame = +3
Query: 312 TSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS 467
T V + T NRC YCR KKC+AVGMS+ A + GR K+ KA+I + +S
Sbjct: 148 TKQCVINKETRNRCMYCRWKKCVAVGMSKTASKLGRRSKQLKAQIAKHLPKS 199
>UniRef50_UPI00005864C9 Cluster: PREDICTED: similar to E75 nuclear
receptor; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to E75 nuclear receptor -
Strongylocentrotus purpuratus
Length = 393
Score = 52.4 bits (120), Expect = 9e-06
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +3
Query: 339 TGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDA 518
T RC +CR +KC+AVGMS +VR GR K++K + LA +Q S EQ E D
Sbjct: 66 TRGRCAHCRYQKCLAVGMSVHSVRVGRYSKKQKMKNLAEIQ---SLATPEQIVERERKDR 122
Query: 519 P--RLLARVVRAH 551
L+ +VV AH
Sbjct: 123 EIYALIQKVVNAH 135
>UniRef50_Q66MI8 Cluster: COUP-TF1 nuclear orphan receptor; n=2;
Hydra vulgaris|Rep: COUP-TF1 nuclear orphan receptor -
Hydra attenuata (Hydra) (Hydra vulgaris)
Length = 453
Score = 52.0 bits (119), Expect = 1e-05
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK 428
N+CQYCRLKKC+ VGM +DAV+ GR+PK
Sbjct: 32 NQCQYCRLKKCVKVGMRKDAVQKGRLPK 59
>UniRef50_UPI0000E4819E Cluster: PREDICTED: similar to Nr1h3
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Nr1h3 protein - Strongylocentrotus
purpuratus
Length = 480
Score = 51.2 bits (117), Expect = 2e-05
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRC CR KKC+ +GMS+DAVR GR+P ++K
Sbjct: 74 NRCPACRYKKCLELGMSKDAVRIGRIPNKQK 104
>UniRef50_Q1W404 Cluster: RAR-like nuclear receptor; n=5;
Schistosoma|Rep: RAR-like nuclear receptor - Schistosoma
mansoni (Blood fluke)
Length = 715
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
N+CQ CRL KCIAVGMSRDAVR R K+ + ++ SS +++ +A +
Sbjct: 317 NKCQQCRLLKCIAVGMSRDAVRKRRQGKKREQSSCESVTLPSSDSSNKYEGSAYSSCSAD 376
Query: 525 LLARVVRAHLD 557
++ +AHL+
Sbjct: 377 VVLTPSKAHLN 387
>UniRef50_P13631 Cluster: Retinoic acid receptor gamma-1; n=5;
Coelomata|Rep: Retinoic acid receptor gamma-1 - Homo
sapiens (Human)
Length = 454
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + + + +T NRCQYCRL+KC VGMS++AVR R K+++ +++ S ++E
Sbjct: 128 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKE------VKEEGSPDSYE 181
Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
+ E L+ +V +AH +T
Sbjct: 182 LSPQLE-----ELITKVSKAHQET 200
>UniRef50_Q4REU2 Cluster: Chromosome 13 SCAF15122, whole genome
shotgun sequence; n=5; Tetraodontidae|Rep: Chromosome 13
SCAF15122, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 746
Score = 50.4 bits (115), Expect = 3e-05
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
N+CQYCRLKKC+ VGM R+AV+ GRVP
Sbjct: 51 NQCQYCRLKKCLKVGMRREAVQRGRVP 77
Score = 42.3 bits (95), Expect = 0.009
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAV 407
N+CQYCRLKKC+ VGM R+AV
Sbjct: 467 NQCQYCRLKKCLKVGMRREAV 487
>UniRef50_P10589 Cluster: COUP transcription factor 1; n=130;
Eumetazoa|Rep: COUP transcription factor 1 - Homo
sapiens (Human)
Length = 423
Score = 49.2 bits (112), Expect = 8e-05
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
N+CQYCRLKKC+ VGM R+AV+ GR+P
Sbjct: 136 NQCQYCRLKKCLKVGMRREAVQRGRMP 162
>UniRef50_P16376 Cluster: Steroid receptor seven-up, isoform A; n=1;
Drosophila melanogaster|Rep: Steroid receptor seven-up,
isoform A - Drosophila melanogaster (Fruit fly)
Length = 746
Score = 49.2 bits (112), Expect = 8e-05
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
N+CQYCRLKKC+ +GM R+AV+ GRVP
Sbjct: 250 NQCQYCRLKKCLKMGMRREAVQRGRVP 276
>UniRef50_Q611B9 Cluster: Putative uncharacterized protein CBG17178;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG17178 - Caenorhabditis
briggsae
Length = 538
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/75 (38%), Positives = 36/75 (48%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQYCR KKC+ GMS+D+V R KR K +S R E DD
Sbjct: 209 NRCQYCRFKKCLDAGMSKDSV---RQTKRNK--------PPTSDRTVSSTVNVEPDDHII 257
Query: 525 LLARVVRAHLDTCEF 569
R++ HL TC +
Sbjct: 258 CADRIIDLHLKTCNY 272
Score = 40.3 bits (90), Expect = 0.037
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCAIRS 418
SC+ +GFFRRSIQ+KI YR C K Q C I R +R +K + S
Sbjct: 175 SCEGCKGFFRRSIQRKIDYR-CLKQQFCEIRRDSRNRCQYCRFKKCLDAGMSK-----DS 228
Query: 419 CTQTRESAYPRSDATV 466
QT+ + P SD TV
Sbjct: 229 VRQTKRNKPPTSDRTV 244
>UniRef50_A7S1X4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 391
Score = 48.8 bits (111), Expect = 1e-04
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
N+CQYCRLKKC+ VGM ++AV+ GR+P
Sbjct: 82 NQCQYCRLKKCLKVGMRKEAVQKGRIP 108
>UniRef50_P10276 Cluster: Retinoic acid receptor alpha; n=207;
Eumetazoa|Rep: Retinoic acid receptor alpha - Homo
sapiens (Human)
Length = 462
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
R + + + +T NRCQYCRL+KC VGMS+++VR R K+++
Sbjct: 126 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 168
>UniRef50_UPI0000F2CA65 Cluster: PREDICTED: similar to DNA
(cytosine-5-)-methyltransferase 3 alpha,; n=2;
Theria|Rep: PREDICTED: similar to DNA
(cytosine-5-)-methyltransferase 3 alpha, - Monodelphis
domestica
Length = 732
Score = 48.0 bits (109), Expect = 2e-04
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
N+CQYCRLKKC VGM ++AV+ GR+P
Sbjct: 444 NQCQYCRLKKCFRVGMRKEAVQRGRIP 470
>UniRef50_Q26641 Cluster: COUP transcription factor; n=2;
Strongylocentrotus purpuratus|Rep: COUP transcription
factor - Strongylocentrotus purpuratus (Purple sea
urchin)
Length = 381
Score = 48.0 bits (109), Expect = 2e-04
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
N+CQYCRLKKC+ +GM R+AV+ GR+P
Sbjct: 191 NQCQYCRLKKCLKMGMRREAVQRGRMP 217
>UniRef50_UPI0000EB22C7 Cluster: UPI0000EB22C7 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB22C7 UniRef100
entry - Canis familiaris
Length = 476
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP-KREKARILAAMQQSSSSR 479
S V +T N+CQ CR KKCIAVGM+ D R RVP K + +L + S R
Sbjct: 43 SCCVIDKITRNQCQLCRFKKCIAVGMAMDLNRLWRVPCKGHRVSLLLIVVLDDSKR 98
>UniRef50_Q173C6 Cluster: Expressed protein; n=1; Aedes aegypti|Rep:
Expressed protein - Aedes aegypti (Yellowfever mosquito)
Length = 594
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503
N+CQ CRLKKC+ +GM++DAV+ R P+ A++ RA +AA A
Sbjct: 178 NQCQACRLKKCLNMGMNKDAVQNERQPRNTATIRPEALRDMEQGRALREAAVA 230
>UniRef50_Q8I748 Cluster: Retinoid X receptor; n=1; Suberites
domuncula|Rep: Retinoid X receptor - Suberites domuncula
(Sponge)
Length = 548
Score = 46.8 bits (106), Expect = 4e-04
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +3
Query: 339 TGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
T NRCQYCRL+KCIA GM ++AV+ R P+ K
Sbjct: 203 TRNRCQYCRLQKCIANGMRKEAVQEERTPQGAK 235
>UniRef50_Q52ZN9 Cluster: Nuclear receptor usp/RXR; n=2;
Coelomata|Rep: Nuclear receptor usp/RXR - Polistes
fuscatus (Paper wasp)
Length = 279
Score = 46.4 bits (105), Expect = 6e-04
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +3
Query: 306 RRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRA 482
R S + NRCQYCR +KC+A+GM R+AV+ R +R K R + ++ +SS A
Sbjct: 12 REEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEER--QRTKERDQSEVESTSSLHA 68
>UniRef50_A1ZA01 Cluster: CG16801-PB, isoform B; n=5;
Endopterygota|Rep: CG16801-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 744
Score = 46.4 bits (105), Expect = 6e-04
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503
N+CQ CRLKKC+ +GM++DAV+ R P+ +++ RA +AA A
Sbjct: 328 NQCQACRLKKCLQMGMNKDAVQNERQPRNTATIRPETLREMEHGRALREAAVA 380
>UniRef50_Q4H2W2 Cluster: Nuclear receptor; n=4; Ascidiacea|Rep:
Nuclear receptor - Ciona intestinalis (Transparent sea
squirt)
Length = 638
Score = 46.0 bits (104), Expect = 7e-04
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = +3
Query: 339 TGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDA 518
T +RCQYCRL+KCI GM R++VR R KR K + +S + E + + E++
Sbjct: 346 TRSRCQYCRLQKCIQAGMLRESVRNDRNKKRGKEK----EGKSDQNGVDEPSCSPEIE-- 399
Query: 519 PRLLARVVRAHLDT 560
L+ V + H++T
Sbjct: 400 -ALVTSVHKFHVET 412
Score = 35.9 bits (79), Expect = 0.80
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRS+Q+ +QY C +N+QC I + R
Sbjct: 314 SCEGCKGFFRRSVQKNMQY-TCHRNKQCLINKSTR 347
>UniRef50_Q4H2U9 Cluster: Nuclear receptor; n=9; Coelomata|Rep:
Nuclear receptor - Ciona intestinalis (Transparent sea
squirt)
Length = 507
Score = 46.0 bits (104), Expect = 7e-04
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +3
Query: 282 RRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
R+Y T R + NRCQYCR +KCI +GM ++AV+ R RE+
Sbjct: 198 RKYLTYTCRDDKDCIIDKRQRNRCQYCRYQKCITMGMKKEAVQEERQKNREQ 249
>UniRef50_Q9Y5X4 Cluster: Photoreceptor-specific nuclear receptor;
n=33; Euteleostomi|Rep: Photoreceptor-specific nuclear
receptor - Homo sapiens (Human)
Length = 410
Score = 46.0 bits (104), Expect = 7e-04
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
N+CQ CRLKKC+ GM++DAV+ R P+ L +M+ ++ SR A
Sbjct: 98 NQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVHLDSMESNTESRPESLVA 148
>UniRef50_Q24142 Cluster: Nuclear hormone receptor HR78; n=4;
Sophophora|Rep: Nuclear hormone receptor HR78 -
Drosophila melanogaster (Fruit fly)
Length = 601
Score = 46.0 bits (104), Expect = 7e-04
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP-KREKARILAAMQQSSSS 476
NRCQ+CRL+KC+A GM D+V+ R P K I+AA SS+S
Sbjct: 102 NRCQFCRLQKCLASGMRSDSVQHERKPIVDRKEGIIAAAGSSSTS 146
>UniRef50_UPI0000D8B087 Cluster: UPI0000D8B087 related cluster; n=1;
Mus musculus|Rep: UPI0000D8B087 UniRef100 entry - Mus
musculus
Length = 345
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAEL 509
N+CQ C LKKC+ GM++DAV+ R P+ L AM+ S SR+ A+ L
Sbjct: 69 NQCQACWLKKCLQAGMNQDAVQNERQPRSMAQVHLDAMETGSDSRSEPVVASPAL 123
>UniRef50_P13056 Cluster: Orphan nuclear receptor TR2; n=78;
Euteleostomi|Rep: Orphan nuclear receptor TR2 - Homo
sapiens (Human)
Length = 483
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
NRCQYCRL++CIA GM +D+V+ R P REK+ AA
Sbjct: 163 NRCQYCRLQRCIAFGMKQDSVQCERKPIEVSREKSSNCAA 202
>UniRef50_UPI000065F8EB Cluster: Homolog of Gallus gallus "Nuclear
orphan receptor ROR-beta.; n=1; Takifugu rubripes|Rep:
Homolog of Gallus gallus "Nuclear orphan receptor
ROR-beta. - Takifugu rubripes
Length = 583
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ 464
NRCQ+CRL+KC+A+GMSRD R RV +I A ++
Sbjct: 59 NRCQHCRLQKCLALGMSRDERRGTRVLSMRDRKIQQAFKE 98
>UniRef50_O77230 Cluster: Nuclear hormone receptor; n=1; Brugia
pahangi|Rep: Nuclear hormone receptor - Brugia pahangi
(Filarial nematode worm)
Length = 265
Score = 44.8 bits (101), Expect = 0.002
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431
+RCQYCR +KCIAVGM ++ VR+G + R
Sbjct: 79 SRCQYCRFQKCIAVGMVKEVVRYGSLSGR 107
Score = 33.1 bits (72), Expect = 5.7
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSI 328
+GFF+R++Q+K QY CT N+ C+I
Sbjct: 50 KGFFKRTVQKKAQY-VCTGNKNCTI 73
>UniRef50_UPI0000DB6D60 Cluster: PREDICTED: similar to Orphan
nuclear receptor TR4 (Orphan nuclear receptor TAK1);
n=2; Apocrita|Rep: PREDICTED: similar to Orphan nuclear
receptor TR4 (Orphan nuclear receptor TAK1) - Apis
mellifera
Length = 546
Score = 44.4 bits (100), Expect = 0.002
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRCQYCRL+KC+A+GM D+V+ R P
Sbjct: 201 NRCQYCRLQKCLAMGMRSDSVQHERKP 227
>UniRef50_UPI00006A05FD Cluster: Orphan nuclear receptor TR4 (Orphan
nuclear receptor TAK1).; n=1; Xenopus tropicalis|Rep:
Orphan nuclear receptor TR4 (Orphan nuclear receptor
TAK1). - Xenopus tropicalis
Length = 582
Score = 44.4 bits (100), Expect = 0.002
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +3
Query: 282 RRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILA 452
R+ T R + V + NRCQ+CRLKKC+ +GM ++V+ R P +REKA A
Sbjct: 152 RKSLTYSCRSSQDCVINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDIQREKASNCA 211
Query: 453 A 455
A
Sbjct: 212 A 212
>UniRef50_Q7Q2K7 Cluster: ENSANGP00000003675; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000003675 - Anopheles gambiae
str. PEST
Length = 756
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/49 (48%), Positives = 27/49 (55%)
Frame = +3
Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRR T A T + + NRCQYCR KKCI GM AVR R+P
Sbjct: 315 NRRVYTCVADGTCEITKA--QRNRCQYCRFKKCIEQGMVLQAVREDRMP 361
>UniRef50_A7TAF5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 261
Score = 44.4 bits (100), Expect = 0.002
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVP-KREKARILAAMQQSS----SSRAHEQAAAAELD 512
RCQYCR +KC+A+GM ++AVR R P R + + L +++++ SS Q A D
Sbjct: 65 RCQYCRFQKCLALGMLKEAVREDRAPGGRPRIKSLIGLKENAETFVSSELIIQLIQARPD 124
Query: 513 DAP-RLLARVVRA 548
P R L R+ R+
Sbjct: 125 AIPKRRLIRLPRS 137
>UniRef50_A7MAD8 Cluster: Hormone receptor-like in 4; n=3; Aedes
aegypti|Rep: Hormone receptor-like in 4 - Aedes aegypti
(Yellowfever mosquito)
Length = 1263
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/49 (48%), Positives = 27/49 (55%)
Frame = +3
Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRR T A T + + NRCQYCR KKCI GM AVR R+P
Sbjct: 861 NRRVYTCVADGTCEITKA--QRNRCQYCRFKKCIEQGMVLQAVREDRMP 907
>UniRef50_O76202 Cluster: Protein ultraspiracle homolog; n=5;
Ditrysia|Rep: Protein ultraspiracle homolog -
Choristoneura fumiferana (Spruce budworm)
Length = 472
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQYCR +KC+A GM R+AV+ R + AR SSS + ++ + L +
Sbjct: 169 NRCQYCRYQKCLACGMKREAVQEER---QRNARGAEDAHPSSSVQVSDELSIERLTEMES 225
Query: 525 LLA 533
L+A
Sbjct: 226 LVA 228
>UniRef50_Q9W539 Cluster: Hormone receptor 4; n=2; Pancrustacea|Rep:
Hormone receptor 4 - Drosophila melanogaster (Fruit fly)
Length = 1518
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/49 (48%), Positives = 27/49 (55%)
Frame = +3
Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRR T A T + + NRCQYCR KKCI GM AVR R+P
Sbjct: 951 NRRVYTCVADGTCEITKA--QRNRCQYCRFKKCIEQGMVLQAVREDRMP 997
>UniRef50_Q95WG3 Cluster: Nuclear receptor AmNR2; n=2;
Hexacorallia|Rep: Nuclear receptor AmNR2 - Acropora
millepora (Coral)
Length = 448
Score = 44.0 bits (99), Expect = 0.003
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
++ NRCQYCR KC+A GM ++AVR R P
Sbjct: 133 ISRNRCQYCRFNKCLAQGMLKEAVREDRTP 162
>UniRef50_Q4KXQ1 Cluster: TR4/TR2; n=11; Eumetazoa|Rep: TR4/TR2 -
Schistosoma mansoni (Blood fluke)
Length = 1943
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRCQYCRL+KC+AVGM +AV+ R P
Sbjct: 654 NRCQYCRLQKCLAVGMRSEAVQNERRP 680
>UniRef50_Q17K29 Cluster: Nuclear hormone receptor; n=2;
Culicidae|Rep: Nuclear hormone receptor - Aedes aegypti
(Yellowfever mosquito)
Length = 630
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCRL+KC+A GM D+V+ R P +K
Sbjct: 100 NRCQYCRLQKCLACGMRSDSVQHERKPIIDK 130
>UniRef50_O61227 Cluster: Nuclear receptor; n=1; Tenebrio
molitor|Rep: Nuclear receptor - Tenebrio molitor (Yellow
mealworm)
Length = 489
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCRL+KC+A GM D+V+ R P +K
Sbjct: 80 NRCQYCRLQKCLACGMRSDSVQHERKPIIDK 110
>UniRef50_A7S286 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 344
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVP-KREKARILAAMQQSSSS 476
RCQYCR +KC+A+GM ++AVR R P R + + L +++++ +
Sbjct: 65 RCQYCRFQKCLALGMLKEAVREDRAPGGRPRIKSLIGLKENAET 108
>UniRef50_UPI0000E479AD Cluster: PREDICTED: similar to MGC79469
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC79469 protein -
Strongylocentrotus purpuratus
Length = 611
Score = 43.6 bits (98), Expect = 0.004
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
R + + S NRCQYCRL KC+ VGM+R A+R +P
Sbjct: 242 RDKNCMMSRQKRNRCQYCRLLKCLQVGMNRKAIREDGMP 280
>UniRef50_Q703I8 Cluster: Zinc finger transcription factor; n=2;
Tribolium castaneum|Rep: Zinc finger transcription
factor - Tribolium castaneum (Red flour beetle)
Length = 228
Score = 43.6 bits (98), Expect = 0.004
Identities = 26/81 (32%), Positives = 36/81 (44%)
Frame = +3
Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
G YN + + V + C+ CRL+KC+ VGMS+ R+GR K
Sbjct: 30 GRTYNNISSISECKNNGECVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHC 89
Query: 447 LAAMQQSSSSRAHEQAAAAEL 509
L QQ + + AAAA L
Sbjct: 90 LLQEQQQAGA---NMAAAANL 107
>UniRef50_P90892 Cluster: Defective fasciculation of axons protein
1; n=2; Caenorhabditis|Rep: Defective fasciculation of
axons protein 1 - Caenorhabditis elegans
Length = 419
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAA 500
N+CQ CRLKKC+ GM++DAV+ R P R A I A+ + E A A
Sbjct: 153 NQCQACRLKKCLNKGMNKDAVQNERQP-RNTATIRPALDMDPQNFFREYAGA 203
>UniRef50_P18102 Cluster: Protein tailless; n=10; Diptera|Rep:
Protein tailless - Drosophila melanogaster (Fruit fly)
Length = 452
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
N+C+ CRL+KC VGM++DAV+ R P+ R AM + + A E
Sbjct: 86 NQCRACRLRKCFEVGMNKDAVQHERGPRNSTLRRHMAMYKDAMMGAGE 133
>UniRef50_Q15406 Cluster: Orphan nuclear receptor NR6A1; n=53;
Euteleostomi|Rep: Orphan nuclear receptor NR6A1 - Homo
sapiens (Human)
Length = 480
Score = 43.6 bits (98), Expect = 0.004
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
R + V S NRCQYCRL KC+ +GM+R A+R +P
Sbjct: 98 RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 136
>UniRef50_Q90WV5 Cluster: Photoreceptor-specific nuclear receptor;
n=7; Coelomata|Rep: Photoreceptor-specific nuclear
receptor - Gallus gallus (Chicken)
Length = 406
Score = 43.2 bits (97), Expect = 0.005
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
N+CQ CRLKKC+ GM++DAV+ R P R A++ + + E AA D P
Sbjct: 86 NQCQACRLKKCLQAGMNKDAVQNERQP-RSTAQVRLDSIELDAELPPEHVAATR--DVPP 142
Query: 525 LLARVVRAH 551
+ R H
Sbjct: 143 VPCPAPRGH 151
>UniRef50_A5HL80 Cluster: Retinoid X receptor alpha 2; n=2;
Clupeocephala|Rep: Retinoid X receptor alpha 2 - Oryzias
latipes (Medaka fish) (Japanese ricefish)
Length = 118
Score = 43.2 bits (97), Expect = 0.005
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A+GM R+AV+ R +E+
Sbjct: 54 NRCQYCRYQKCLAMGMKREAVQEERQRGKER 84
>UniRef50_Q16IX1 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 295
Score = 43.2 bits (97), Expect = 0.005
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 243 AVTRRASSGDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
A TR + G YN + + V + C+ CRL+KC+ VGMS+ R+GR
Sbjct: 26 ADTRTSFFGRTYNNLSSISECKNNGECVINKKNRTACKACRLRKCLVVGMSKSGSRYGR 84
>UniRef50_UPI000051A33D Cluster: PREDICTED: similar to
photoreceptor-specific nuclear receptor isoform b; n=1;
Apis mellifera|Rep: PREDICTED: similar to
photoreceptor-specific nuclear receptor isoform b - Apis
mellifera
Length = 402
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSS 470
N+CQ CR KC+ V M RDAV+ R P+ + + AA + S
Sbjct: 69 NQCQACRFTKCLQVNMKRDAVQHERAPRNTSSLVAAARRGPS 110
>UniRef50_UPI000065FDEF Cluster: Homolog of Gallus gallus "Nuclear
orphan receptor ROR-beta.; n=1; Takifugu rubripes|Rep:
Homolog of Gallus gallus "Nuclear orphan receptor
ROR-beta. - Takifugu rubripes
Length = 538
Score = 42.7 bits (96), Expect = 0.007
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 19/64 (29%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRD-------------------AVRFGRVPKREKARILAAMQQS 467
NRCQ+CRL+KC+A+GMSRD AV+FGR+ K+++ + A +Q+
Sbjct: 60 NRCQHCRLQKCLALGMSRDGLWVTFLDSSFSIFFLILLAVKFGRMSKKQRDSLYAEVQKH 119
Query: 468 SSSR 479
S+
Sbjct: 120 QQSQ 123
>UniRef50_Q95WG1 Cluster: Nuclear receptor AmNR4 isoform A; n=3;
Acropora millepora|Rep: Nuclear receptor AmNR4 isoform A
- Acropora millepora (Coral)
Length = 416
Score = 42.7 bits (96), Expect = 0.007
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRCQ CRLKKC+ +GM R+AV+ R P
Sbjct: 88 NRCQRCRLKKCLTMGMKREAVQCERKP 114
>UniRef50_Q617F2 Cluster: Putative uncharacterized protein CBG14997;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG14997 - Caenorhabditis
briggsae
Length = 457
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK 428
NRC+ CRLKKC AVGM R+AVR R K
Sbjct: 72 NRCRQCRLKKCEAVGMDREAVRTERKKK 99
>UniRef50_Q4H3F3 Cluster: Nuclear receptor; n=1; Ciona
intestinalis|Rep: Nuclear receptor - Ciona intestinalis
(Transparent sea squirt)
Length = 694
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
R+ + V S NRCQ+CRL KC+ +GM+R A+R +P
Sbjct: 141 RSKNCVMSRKQRNRCQFCRLLKCLQMGMNRKAIREDGMP 179
>UniRef50_P28702 Cluster: Retinoic acid receptor RXR-beta; n=240;
Coelomata|Rep: Retinoic acid receptor RXR-beta - Homo
sapiens (Human)
Length = 533
Score = 42.7 bits (96), Expect = 0.007
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285
>UniRef50_Q9XVV3 Cluster: Nuclear hormone receptor family member
nhr-67; n=3; Caenorhabditis|Rep: Nuclear hormone
receptor family member nhr-67 - Caenorhabditis elegans
Length = 416
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
N+C+ CRL+KC+ +GM++DAV+ R P+ R M SS
Sbjct: 76 NQCRACRLRKCLEIGMNKDAVQHERGPRNSSLRRQQMMFDHGSS 119
>UniRef50_P41830 Cluster: Steroid hormone receptor family member
cnr14; n=3; Caenorhabditis elegans|Rep: Steroid hormone
receptor family member cnr14 - Caenorhabditis elegans
Length = 534
Score = 42.7 bits (96), Expect = 0.007
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
NRCQYCR KKC+ GMS+D+VR
Sbjct: 201 NRCQYCRFKKCLDSGMSKDSVR 222
Score = 40.3 bits (90), Expect = 0.037
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQ+KI YR C K Q C I R +R
Sbjct: 167 SCEGCKGFFRRSIQRKIDYR-CLKQQVCEIKRESR 200
>UniRef50_UPI0000DB6EB1 Cluster: PREDICTED: similar to Nuclear
Hormone Receptor family member (nhr-91); n=1; Apis
mellifera|Rep: PREDICTED: similar to Nuclear Hormone
Receptor family member (nhr-91) - Apis mellifera
Length = 914
Score = 42.3 bits (95), Expect = 0.009
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRCQYCR KKCI GM AVR R+P
Sbjct: 550 NRCQYCRFKKCIEQGMVLQAVREDRMP 576
>UniRef50_Q9NCL0 Cluster: Tailless ortholog; n=3; Coelomata|Rep:
Tailless ortholog - Tribolium castaneum (Red flour
beetle)
Length = 406
Score = 42.3 bits (95), Expect = 0.009
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +3
Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443
NR+Y A+ S + N+C+ CRLKKC VGM++DAV+ R P+ R
Sbjct: 69 NRQY-VCKAKDEGSCIIDKTHRNQCRACRLKKCQNVGMNKDAVQHERGPRNSTLR 122
>UniRef50_Q95WF8 Cluster: Nuclear receptor AmNR6; n=2;
Astrocoeniina|Rep: Nuclear receptor AmNR6 - Acropora
millepora (Coral)
Length = 340
Score = 42.3 bits (95), Expect = 0.009
Identities = 17/44 (38%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVP-KREKARILAAMQQSSSS 476
RCQ+CR +KC+++GM ++AVR R P R + + L M++++ +
Sbjct: 62 RCQFCRFQKCLSLGMLKEAVREDRAPGGRPRIKSLMGMKENADT 105
>UniRef50_Q8WSJ4 Cluster: Hormone receptor 4; n=3; Obtectomera|Rep:
Hormone receptor 4 - Manduca sexta (Tobacco hawkmoth)
(Tobacco hornworm)
Length = 743
Score = 42.3 bits (95), Expect = 0.009
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRCQYCR KKCI GM AVR R+P
Sbjct: 392 NRCQYCRFKKCIEQGMVLQAVREDRMP 418
>UniRef50_Q26622 Cluster: Orphan steroid hormone receptor 2; n=7;
Bilateria|Rep: Orphan steroid hormone receptor 2 -
Strongylocentrotus purpuratus (Purple sea urchin)
Length = 583
Score = 42.3 bits (95), Expect = 0.009
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCRL+KC+ +GM D+V+ R P + +
Sbjct: 137 NRCQYCRLQKCLDMGMKSDSVQCERSPLKTR 167
Score = 32.3 bits (70), Expect = 9.9
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFF+RSI++ + Y C N+ C I++ NR
Sbjct: 103 SCEGCKGFFKRSIRKHLGY-TCRGNKDCQIIKHNR 136
>UniRef50_P13054 Cluster: Knirps-related protein; n=2;
Sophophora|Rep: Knirps-related protein - Drosophila
melanogaster (Fruit fly)
Length = 647
Score = 42.3 bits (95), Expect = 0.009
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +3
Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
G YN + + + + C+ CRLKKC+ VGMS+ R+GR K
Sbjct: 39 GRSYNNLSSISDCKNNGECIINKKNRTACKACRLKKCLMVGMSKSGSRYGRRSNWFKIHC 98
Query: 447 LAAMQQSSSSRA 482
L QQ + A
Sbjct: 99 LLQEQQQQAVAA 110
>UniRef50_UPI00015B573C Cluster: PREDICTED: similar to thr4; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to thr4 -
Nasonia vitripennis
Length = 916
Score = 41.9 bits (94), Expect = 0.012
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +3
Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRR T A + + + NRCQYCR KKC+ GM AVR R+P
Sbjct: 535 NRRIYTCVAEGSCEITKA--QRNRCQYCRFKKCMDQGMVLQAVREDRMP 581
>UniRef50_UPI0000588887 Cluster: PREDICTED: similar to GA10225-PA;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to GA10225-PA - Strongylocentrotus purpuratus
Length = 483
Score = 41.9 bits (94), Expect = 0.012
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
N C YCRLKKC AV M++ AV+ R P+++K
Sbjct: 61 NWCPYCRLKKCFAVNMNKSAVQEERGPRKKK 91
>UniRef50_Q4T0V6 Cluster: Chromosome undetermined SCAF10841, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10841,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 467
Score = 41.9 bits (94), Expect = 0.012
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM----QQSSSSRAHEQAAAAELD 512
N+CQ CRLKKC+ GM++DAV+ R P+ L A+ ++ + E +
Sbjct: 106 NQCQACRLKKCLQAGMNKDAVQNERQPRSTAQVRLDAIDIDPEKEHLATTREPTTTSSSS 165
Query: 513 DAPRLLARVVRAHL 554
+ +L VR H+
Sbjct: 166 SSTAILLHRVRPHV 179
>UniRef50_Q4RXK2 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 11
SCAF14979, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 621
Score = 41.9 bits (94), Expect = 0.012
Identities = 18/34 (52%), Positives = 26/34 (76%), Gaps = 2/34 (5%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRD--AVRFGRVPKREKA 440
NRCQ+CRL+KC+A+GMSRD +R+ +R+ A
Sbjct: 60 NRCQHCRLQKCLALGMSRDEALIRWWASSRRDPA 93
>UniRef50_Q4U1Y2 Cluster: Steroid hormone receptor 3; n=1;
Strongylocentrotus purpuratus|Rep: Steroid hormone
receptor 3 - Strongylocentrotus purpuratus (Purple sea
urchin)
Length = 715
Score = 41.9 bits (94), Expect = 0.012
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRCQYCR +KC+ +GM +AVR R+P
Sbjct: 321 NRCQYCRFQKCLHMGMMLEAVREDRMP 347
>UniRef50_Q0IGD6 Cluster: Tailless; n=1; Aedes aegypti|Rep: Tailless
- Aedes aegypti (Yellowfever mosquito)
Length = 397
Score = 41.9 bits (94), Expect = 0.012
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443
N+C+ CRLKKC VGM++DAV+ R P+ R
Sbjct: 85 NQCRACRLKKCFEVGMNKDAVQHERGPRSSTLR 117
>UniRef50_A7S012 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 364
Score = 41.9 bits (94), Expect = 0.012
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443
N+CQ CRL+KC + M+RDAV+ R P+ + R
Sbjct: 54 NQCQACRLRKCFEMNMNRDAVQHERAPRTSQIR 86
>UniRef50_P49116 Cluster: Orphan nuclear receptor TR4; n=13;
Eumetazoa|Rep: Orphan nuclear receptor TR4 - Homo
sapiens (Human)
Length = 596
Score = 41.9 bits (94), Expect = 0.012
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
NRCQ+CRLKKC+ +GM ++V+ R P +REK AA
Sbjct: 167 NRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPSNCAA 206
>UniRef50_P43354 Cluster: Orphan nuclear receptor NR4A2; n=77;
Euteleostomi|Rep: Orphan nuclear receptor NR4A2 - Homo
sapiens (Human)
Length = 598
Score = 41.9 bits (94), Expect = 0.012
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
NRCQYCR +KC+AVGM ++ VR GR+P + K+
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 351
>UniRef50_Q10902 Cluster: Nuclear hormone receptor family member
nhr-2; n=4; Caenorhabditis elegans|Rep: Nuclear hormone
receptor family member nhr-2 - Caenorhabditis elegans
Length = 359
Score = 41.9 bits (94), Expect = 0.012
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAA 500
RCQ CR KC+AVGM+RD VR + ++ +A+ +S+ E AA
Sbjct: 163 RCQACRFAKCLAVGMNRDNVRVNKETDKDVKPSVASPNFEMTSQVKELTAA 213
>UniRef50_UPI00015B4A62 Cluster: PREDICTED: similar to nuclear
receptor; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to nuclear receptor - Nasonia vitripennis
Length = 427
Score = 41.5 bits (93), Expect = 0.016
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM 458
N+CQ CR +KC+ V M RDAV+ R P R +AAM
Sbjct: 61 NQCQACRFRKCLQVNMKRDAVQHERAP-RSATTSMAAM 97
>UniRef50_UPI0000DB771B Cluster: PREDICTED: similar to Hormone
receptor-like in 38 CG1864-PB, isoform B; n=3; Apis
mellifera|Rep: PREDICTED: similar to Hormone
receptor-like in 38 CG1864-PB, isoform B - Apis
mellifera
Length = 787
Score = 41.5 bits (93), Expect = 0.016
Identities = 25/72 (34%), Positives = 38/72 (52%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQ+CR +KC+ VGM ++ VR + K + R+ S E ++ +
Sbjct: 503 NRCQFCRFQKCLMVGMVKEVVRTDSL-KGRRGRL-----PSKPKSPQESPPSSPVS---- 552
Query: 525 LLARVVRAHLDT 560
L+ +VRAHLDT
Sbjct: 553 LITALVRAHLDT 564
>UniRef50_Q98ST8 Cluster: Ff1c; n=6; Clupeocephala|Rep: Ff1c - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 537
Score = 41.5 bits (93), Expect = 0.016
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRV 422
N+RY A+ ++ RC YCR +KC+AVGM ++AVR R+
Sbjct: 82 NKRYTCAEAQNCPMDLAQR---KRCPYCRFQKCVAVGMKKEAVRADRM 126
>UniRef50_Q7ZZY9 Cluster: Vitamin D receptor; n=1; Petromyzon
marinus|Rep: Vitamin D receptor - Petromyzon marinus
(Sea lamprey)
Length = 406
Score = 41.5 bits (93), Expect = 0.016
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
CQ CRLK+C +GM ++ + +R+K I+ + S+ H L++ RL+
Sbjct: 79 CQACRLKRCRDIGMMKELIMTEEEVQRKKEIIMKRKLEDSAREVHTPQL---LEEQERLI 135
Query: 531 ARVVRAHLDT 560
A ++ AH T
Sbjct: 136 ATLIEAHRKT 145
>UniRef50_Q4SD43 Cluster: Chromosome 1 SCAF14643, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 1 SCAF14643, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 350
Score = 41.5 bits (93), Expect = 0.016
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRD 401
NRCQ+CRL+KC+A+GMSRD
Sbjct: 60 NRCQHCRLQKCLALGMSRD 78
>UniRef50_Q49MA6 Cluster: Nuclear receptor 2DBD-gamma; n=3;
Bilateria|Rep: Nuclear receptor 2DBD-gamma - Schistosoma
mansoni (Blood fluke)
Length = 1861
Score = 41.5 bits (93), Expect = 0.016
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +3
Query: 306 RRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
R + +G T N C+ CR ++C+AVGMS+ AV P K R ++Q S+
Sbjct: 518 RNGGNCAVTGATRNNCKSCRYRRCLAVGMSKHAVVSALQPNAIKHRCAVEIEQIRSA 574
>UniRef50_Q1RPY8 Cluster: Nuclear receptor; n=2; Ciona
intestinalis|Rep: Nuclear receptor - Ciona intestinalis
(Transparent sea squirt)
Length = 692
Score = 41.5 bits (93), Expect = 0.016
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+ +GM D+V+ R P ++
Sbjct: 256 NRCQYCRFQKCVLMGMKSDSVQCERSPMHKQ 286
>UniRef50_Q92570 Cluster: Orphan nuclear receptor NR4A3; n=26;
Euteleostomi|Rep: Orphan nuclear receptor NR4A3 - Homo
sapiens (Human)
Length = 626
Score = 41.5 bits (93), Expect = 0.016
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
NRCQYCR +KC++VGM ++ VR GR+P + K+ + Q S
Sbjct: 342 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 390
>UniRef50_Q9Y466 Cluster: Orphan nuclear receptor NR2E1; n=38;
Eumetazoa|Rep: Orphan nuclear receptor NR2E1 - Homo
sapiens (Human)
Length = 385
Score = 41.5 bits (93), Expect = 0.016
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500
N+C+ CRLKKC+ V M++DAV+ R P+ R A+ ++ + + AH +AA
Sbjct: 68 NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 124
>UniRef50_P15370 Cluster: Protein embryonic gonad; n=2;
Sophophora|Rep: Protein embryonic gonad - Drosophila
melanogaster (Fruit fly)
Length = 373
Score = 41.5 bits (93), Expect = 0.016
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = +3
Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
G YN + V + C+ CRL+KC+ VGMS+ R+GR K
Sbjct: 30 GRTYNNIAAIAGCKHNGDCVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHC 89
Query: 447 LAAMQQSSS 473
L QQ++S
Sbjct: 90 LLQEQQTTS 98
>UniRef50_UPI0000E47369 Cluster: PREDICTED: similar to ROR-alpha 1,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to ROR-alpha 1, partial -
Strongylocentrotus purpuratus
Length = 497
Score = 36.7 bits (81), Expect(2) = 0.018
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGM 392
NRCQ+CR KKC+AVGM
Sbjct: 90 NRCQHCRFKKCLAVGM 105
Score = 23.8 bits (49), Expect(2) = 0.018
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +3
Query: 399 DAVRFGRVPKREK 437
+AVR+GRVP+R K
Sbjct: 140 EAVRYGRVPQRGK 152
>UniRef50_Q7PUT9 Cluster: ENSANGP00000017626; n=12;
Endopterygota|Rep: ENSANGP00000017626 - Anopheles
gambiae str. PEST
Length = 485
Score = 41.1 bits (92), Expect = 0.021
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
NRCQYCR +KC+A GM R+AV+
Sbjct: 186 NRCQYCRYQKCLACGMKREAVQ 207
>UniRef50_A0NCV2 Cluster: ENSANGP00000031834; n=2; Culicidae|Rep:
ENSANGP00000031834 - Anopheles gambiae str. PEST
Length = 98
Score = 41.1 bits (92), Expect = 0.021
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +3
Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
G YN + + + + C+ CRL+KC+ VGMS+ R+GR K
Sbjct: 30 GRSYNNLSSISECKNNGECIINKKNRTACKACRLRKCLMVGMSKSGSRYGRRSNWFKIHC 89
Query: 447 LAAMQQSSS 473
L QQ ++
Sbjct: 90 LLQEQQQAA 98
>UniRef50_P10827 Cluster: Thyroid hormone receptor alpha; n=186;
root|Rep: Thyroid hormone receptor alpha - Homo sapiens
(Human)
Length = 490
Score = 41.1 bits (92), Expect = 0.021
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
S V +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95 SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125
>UniRef50_Q9N4B8 Cluster: Nuclear hormone receptor family member
nhr-41; n=5; Caenorhabditis|Rep: Nuclear hormone
receptor family member nhr-41 - Caenorhabditis elegans
Length = 615
Score = 41.1 bits (92), Expect = 0.021
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRCQYCRL+KC+++GM ++V+ R P
Sbjct: 202 NRCQYCRLRKCLSMGMRSESVQAERRP 228
>UniRef50_UPI0000F1FFCD Cluster: PREDICTED: neural orphan nuclear
receptor NOR1 isoform 1; n=1; Danio rerio|Rep:
PREDICTED: neural orphan nuclear receptor NOR1 isoform 1
- Danio rerio
Length = 575
Score = 40.7 bits (91), Expect = 0.028
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
NRCQYCR +KC++VGM ++ VR GR+P + K+
Sbjct: 305 NRCQYCRFQKCLSVGMVKEVVRTDNLKGRRGRLPSKPKS 343
>UniRef50_UPI0000D55997 Cluster: PREDICTED: similar to
Knirps-related protein, partial; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Knirps-related
protein, partial - Tribolium castaneum
Length = 330
Score = 40.7 bits (91), Expect = 0.028
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +3
Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
G YN + + V + C+ CRL+KC+ VGMS+ R+GR K
Sbjct: 30 GRSYNNLSSISECKNNGECVINKKNRTACKACRLRKCLMVGMSKSGSRYGRRSNWFKIHC 89
Query: 447 LAAMQQ 464
L QQ
Sbjct: 90 LLQEQQ 95
>UniRef50_UPI0000D556F1 Cluster: PREDICTED: similar to CG9019-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG9019-PA - Tribolium castaneum
Length = 483
Score = 40.7 bits (91), Expect = 0.028
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH 485
N+C+ CRL KC M++DAV+ R P++ K + + Q S H
Sbjct: 89 NQCRACRLSKCFQASMNKDAVQHERGPRKPKLQASSNQQMQPSPVGH 135
>UniRef50_UPI0000584A1E Cluster: PREDICTED: similar to nuclear
receptor AmNR2; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to nuclear receptor AmNR2 -
Strongylocentrotus purpuratus
Length = 448
Score = 40.7 bits (91), Expect = 0.028
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
N CQ+CR +KC+ GM DAVR R+P
Sbjct: 119 NSCQFCRFQKCLTAGMKTDAVREDRLP 145
>UniRef50_UPI000051A1CD Cluster: PREDICTED: similar to
Knirps-related protein; n=1; Apis mellifera|Rep:
PREDICTED: similar to Knirps-related protein - Apis
mellifera
Length = 420
Score = 40.7 bits (91), Expect = 0.028
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = +3
Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
G YN + + V + C+ CRL+KC+ VGMS+ R+GR K
Sbjct: 30 GRSYNNLSSISECKNGGECVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHC 89
Query: 447 LAAMQQSSSSRAHE 488
L QQ + +
Sbjct: 90 LLQEQQQQQQQQQQ 103
>UniRef50_Q4RI46 Cluster: Chromosome 8 SCAF15044, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 8
SCAF15044, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 650
Score = 40.7 bits (91), Expect = 0.028
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
NRCQYCR +KC++VGM ++ VR GR+P + K+
Sbjct: 338 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKS 376
>UniRef50_Q2M0D5 Cluster: GA17924-PA; n=1; Drosophila
pseudoobscura|Rep: GA17924-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 803
Score = 40.7 bits (91), Expect = 0.028
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 10/49 (20%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVR----------FGRVPKREKARILAAMQQ 464
RC YCR +KC+ VGM +AVR FG + KR++AR L M+Q
Sbjct: 390 RCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQ 438
>UniRef50_O96562 Cluster: Retinoic acid X receptor; n=1; Tripedalia
cystophora|Rep: Retinoic acid X receptor - Tripedalia
cystophora (Jellyfish)
Length = 435
Score = 40.7 bits (91), Expect = 0.028
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+ VGM +AV+ + K K
Sbjct: 156 NRCQYCRFQKCVQVGMKPEAVQDETLKKERK 186
>UniRef50_Q20765 Cluster: Nuclear hormone receptor family member
nhr-7; n=2; Caenorhabditis|Rep: Nuclear hormone receptor
family member nhr-7 - Caenorhabditis elegans
Length = 536
Score = 40.7 bits (91), Expect = 0.028
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N C+YCR +KC+ VGM+ D VR R ++ +L+ + S S ++ A
Sbjct: 60 NACRYCRFRKCLLVGMNPDYVRPDREKSKKGKTVLSKKKSVSRSLSYRLA 109
>UniRef50_O45666 Cluster: Nuclear hormone receptor family member
nhr-49; n=5; Caenorhabditis|Rep: Nuclear hormone
receptor family member nhr-49 - Caenorhabditis elegans
Length = 501
Score = 40.7 bits (91), Expect = 0.028
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C+YCR +KC+ VGM R+A++F R P
Sbjct: 87 CRYCRFQKCVQVGMKREAIQFERDP 111
>UniRef50_P33244 Cluster: Nuclear hormone receptor FTZ-F1; n=4;
Coelomata|Rep: Nuclear hormone receptor FTZ-F1 -
Drosophila melanogaster (Fruit fly)
Length = 1027
Score = 40.7 bits (91), Expect = 0.028
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 10/49 (20%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVR----------FGRVPKREKARILAAMQQ 464
RC YCR +KC+ VGM +AVR FG + KR++AR L M+Q
Sbjct: 559 RCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQ 607
>UniRef50_UPI0000E4A84F Cluster: PREDICTED: similar to retinoic X
receptor-like protein, partial; n=3; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to retinoic X
receptor-like protein, partial - Strongylocentrotus
purpuratus
Length = 308
Score = 40.3 bits (90), Expect = 0.037
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK 428
NRCQYCR +KC+ +GM R+AV+ R K
Sbjct: 183 NRCQYCRYQKCLGMGMRREAVQEERQRK 210
>UniRef50_Q90Y24 Cluster: Thyroid hormone receptor alpha small
isoform; n=4; Euteleostomi|Rep: Thyroid hormone receptor
alpha small isoform - Oreochromis niloticus (Nile
tilapia) (Tilapia nilotica)
Length = 241
Score = 40.3 bits (90), Expect = 0.037
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV 407
+T N+CQ CR KKCIAVGM+ D V
Sbjct: 24 ITRNQCQLCRFKKCIAVGMAMDLV 47
>UniRef50_Q4RI90 Cluster: Chromosome 8 SCAF15044, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 8
SCAF15044, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 503
Score = 40.3 bits (90), Expect = 0.037
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRD 401
NRCQ+CRL+KC+A GMSRD
Sbjct: 58 NRCQHCRLQKCLAQGMSRD 76
>UniRef50_Q9NB03 Cluster: Nuclear receptor FTZ-F1 protein; n=2;
Aedes aegypti|Rep: Nuclear receptor FTZ-F1 protein -
Aedes aegypti (Yellowfever mosquito)
Length = 840
Score = 40.3 bits (90), Expect = 0.037
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 10/49 (20%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVR----------FGRVPKREKARILAAMQQ 464
RC YCR +KC+ VGM +AVR FG + KR++AR L M+Q
Sbjct: 388 RCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQIMRQ 436
>UniRef50_Q4H333 Cluster: Nuclear receptor; n=2; Coelomata|Rep:
Nuclear receptor - Ciona intestinalis (Transparent sea
squirt)
Length = 1054
Score = 40.3 bits (90), Expect = 0.037
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQ+CR +KC+AVGM ++ VR + K + R+ S + A
Sbjct: 765 NRCQFCRFEKCLAVGMVKEVVRTDHL-KGRRGRL-------PSKPKGPKDPVAPPSPPVS 816
Query: 525 LLARVVRAHLDT 560
+ +VRAH+DT
Sbjct: 817 FITSLVRAHVDT 828
>UniRef50_Q3I5Q0 Cluster: RXRc nuclear hormone receptor; n=4;
Decapoda|Rep: RXRc nuclear hormone receptor - Gecarcinus
lateralis (Blackback land crab)
Length = 363
Score = 40.3 bits (90), Expect = 0.037
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
NRCQYCR +KC+ +GM R+AV+
Sbjct: 122 NRCQYCRYQKCLTMGMKREAVQ 143
>UniRef50_UPI0000E460D2 Cluster: PREDICTED: similar to orphan
nuclear hormone receptor; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to orphan nuclear
hormone receptor - Strongylocentrotus purpuratus
Length = 723
Score = 39.9 bits (89), Expect = 0.049
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQYCR +KC+A GM ++ VR + R + L Q++S +
Sbjct: 438 NRCQYCRFQKCLACGMVKEVVRTDNL--RGRRGRLPTKQRNSQDLPPPSPPVS------- 488
Query: 525 LLARVVRAHLD 557
L+ +VRAH+D
Sbjct: 489 LITALVRAHVD 499
>UniRef50_UPI0000DB6F53 Cluster: PREDICTED: similar to nuclear
receptor subfamily 2, group E, member 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to nuclear receptor
subfamily 2, group E, member 1 - Apis mellifera
Length = 418
Score = 39.9 bits (89), Expect = 0.049
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443
N+C+ CRL KCI GM++DAV+ R P+ R
Sbjct: 101 NQCRACRLAKCIQAGMNKDAVQHERGPRNSTLR 133
>UniRef50_Q9Y1J4 Cluster: Retinoid X receptor RXR-2; n=10;
Bilateria|Rep: Retinoid X receptor RXR-2 - Schistosoma
mansoni (Blood fluke)
Length = 1501
Score = 39.9 bits (89), Expect = 0.049
Identities = 17/41 (41%), Positives = 29/41 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS 467
NRCQYCR +KC+ GM R+AV+ +R++ ++ + +Q+S
Sbjct: 965 NRCQYCRYQKCLRAGMRREAVQ----EERQQQQLQSEVQRS 1001
>UniRef50_Q9Y0D1 Cluster: Fushi tarazu-factor 1; n=4;
Pancrustacea|Rep: Fushi tarazu-factor 1 - Metapenaeus
ensis (Greasyback shrimp) (Sand shrimp)
Length = 545
Score = 39.9 bits (89), Expect = 0.049
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 10/54 (18%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVR----------FGRVPKREKARILAAMQQSSSSR 479
RC YCR +KC+ VGM +AVR FG + KR++AR L ++Q S+
Sbjct: 84 RCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQLLRQRQLSQ 137
>UniRef50_Q8ST32 Cluster: Nuclear receptor RXR; n=1; Dirofilaria
immitis|Rep: Nuclear receptor RXR - Dirofilaria immitis
(Canine heartworm)
Length = 474
Score = 39.9 bits (89), Expect = 0.049
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431
NRCQYCR +KC ++GM R+AV+ R R
Sbjct: 179 NRCQYCRYRKCQSMGMKREAVQEERQSSR 207
>UniRef50_Q2TUU9 Cluster: Two-DBD-nuclear receptor; n=3; Schistosoma
mansoni|Rep: Two-DBD-nuclear receptor - Schistosoma
mansoni (Blood fluke)
Length = 1527
Score = 39.9 bits (89), Expect = 0.049
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
N C+ CR ++C+A GMS+ R GR P K ++Q + R + ++
Sbjct: 618 NACKSCRFRRCLAAGMSKKGSRIGRQPNAVKFHCAIEIKQLQAIRGNSSSS 668
>UniRef50_Q4SGI3 Cluster: Chromosome undetermined SCAF14594, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14594,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 404
Score = 39.5 bits (88), Expect = 0.065
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV 407
+T N+CQ CR KKCIAVGM+ D V
Sbjct: 63 VTRNQCQECRFKKCIAVGMATDLV 86
>UniRef50_A7RX15 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 351
Score = 39.5 bits (88), Expect = 0.065
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPK 428
+CQ CR KKC VGM R+A+R GR K
Sbjct: 73 QCQACRFKKCATVGMRREAIRRGRPTK 99
>UniRef50_P20153 Cluster: Protein ultraspiracle; n=6;
Schizophora|Rep: Protein ultraspiracle - Drosophila
melanogaster (Fruit fly)
Length = 508
Score = 39.5 bits (88), Expect = 0.065
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
NRCQYCR +KC+ GM R+AV+
Sbjct: 154 NRCQYCRYQKCLTCGMKREAVQ 175
>UniRef50_Q9U2R6 Cluster: Nuclear hormone receptor family member
nhr-91; n=5; Caenorhabditis|Rep: Nuclear hormone
receptor family member nhr-91 - Caenorhabditis elegans
Length = 474
Score = 39.5 bits (88), Expect = 0.065
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRCQ CR +KCI+ GM +AVR R+P
Sbjct: 150 NRCQSCRFRKCISKGMLTEAVREDRMP 176
>UniRef50_P41829 Cluster: Nuclear hormone receptor family member
nhr-6; n=2; Caenorhabditis|Rep: Nuclear hormone receptor
family member nhr-6 - Caenorhabditis elegans
Length = 619
Score = 39.5 bits (88), Expect = 0.065
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431
+RCQYCR +KC+ VGM ++ VR G + R
Sbjct: 318 SRCQYCRYQKCLEVGMVKEIVRHGSLSGR 346
>UniRef50_UPI0000587672 Cluster: PREDICTED: similar to tailless;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to tailless - Strongylocentrotus purpuratus
Length = 457
Score = 39.1 bits (87), Expect = 0.086
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473
N+C+ CRL+KC M++DAV+ R P++ K + + ++ S+
Sbjct: 109 NQCRACRLRKCFEAQMNKDAVQHERGPRKPKNKPMVSIDARST 151
>UniRef50_Q49MV3 Cluster: Nuclear receptor 2DBD-beta; n=2;
Schistosoma|Rep: Nuclear receptor 2DBD-beta -
Schistosoma mansoni (Blood fluke)
Length = 1523
Score = 39.1 bits (87), Expect = 0.086
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
N C+ CR ++C+AVGMS+ R GR P K + Q ++S
Sbjct: 224 NMCKSCRFQRCLAVGMSKTGSRIGRQPNTIKYYCAREISQLTNS 267
>UniRef50_P49869 Cluster: Probable nuclear hormone receptor HR38;
n=19; Coelomata|Rep: Probable nuclear hormone receptor
HR38 - Drosophila melanogaster (Fruit fly)
Length = 1073
Score = 39.1 bits (87), Expect = 0.086
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQ+CR +KC+ VGM ++ VR + K + R+ S E + +
Sbjct: 794 NRCQFCRFQKCLVVGMVKEVVRTDSL-KGRRGRL-----PSKPKSPQESPPSPPIS---- 843
Query: 525 LLARVVRAHLDT 560
L+ +VR+H+DT
Sbjct: 844 LITALVRSHVDT 855
>UniRef50_O42554 Cluster: ReverbB; n=2; Danio rerio|Rep: ReverbB -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 43
Score = 38.7 bits (86), Expect = 0.11
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDA 404
NRCQ CR KKC+ VGMS DA
Sbjct: 24 NRCQQCRFKKCLLVGMSSDA 43
Score = 37.5 bits (83), Expect = 0.26
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 275 IQQKIQYRPCTKNQQCSILRINR 343
+QQ IQY+ C KN+ C I+RINR
Sbjct: 1 MQQNIQYKKCLKNESCPIMRINR 23
>UniRef50_O45117 Cluster: Ultraspiracle; n=3; Endopterygota|Rep:
Ultraspiracle - Chironomus tentans (Midge)
Length = 552
Score = 38.7 bits (86), Expect = 0.11
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
NRCQYCR +KC+ GM R+AV+
Sbjct: 247 NRCQYCRYQKCLNCGMKREAVQ 268
>UniRef50_Q8T7Y2 Cluster: Nuclear orphan receptor; n=1; Bombyx
mori|Rep: Nuclear orphan receptor - Bombyx mori (Silk
moth)
Length = 461
Score = 38.3 bits (85), Expect = 0.15
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRD 401
NRCQYCRL+KC+A GM D
Sbjct: 73 NRCQYCRLQKCLACGMRSD 91
>UniRef50_O77154 Cluster: Nuclear receptor 1; n=2; Ciona
intestinalis|Rep: Nuclear receptor 1 - Ciona
intestinalis (Transparent sea squirt)
Length = 587
Score = 38.3 bits (85), Expect = 0.15
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAV--RFGRVPKR---EKARILAAMQQSSSSRAHEQAAAAEL 509
N+CQ CR +KCIA GM+ D V R+ KR E+ R L + S +
Sbjct: 96 NQCQMCRYEKCIATGMATDLVLNEDKRIAKRKLIERNRQLRRHKDISHVMGTWKVGRGS- 154
Query: 510 DDAPRLLARVVRAHLD 557
DD +++ VV+AH D
Sbjct: 155 DDDNHVISAVVQAHND 170
>UniRef50_A7J001 Cluster: Rxr1; n=1; Oikopleura dioica|Rep: Rxr1 -
Oikopleura dioica (Tunicate)
Length = 239
Score = 38.3 bits (85), Expect = 0.15
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
NRCQYCR +KC+ GM ++AV+
Sbjct: 44 NRCQYCRYQKCLLAGMKKEAVQ 65
>UniRef50_O17611 Cluster: Nuclear hormone receptor family member
nhr-100; n=2; Caenorhabditis elegans|Rep: Nuclear
hormone receptor family member nhr-100 - Caenorhabditis
elegans
Length = 437
Score = 38.3 bits (85), Expect = 0.15
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK 428
NRC+ CRLK+C+ VGM +AVR R K
Sbjct: 74 NRCRACRLKRCLHVGMDANAVRSERTRK 101
>UniRef50_P10734 Cluster: Zygotic gap protein knirps; n=10;
Schizophora|Rep: Zygotic gap protein knirps - Drosophila
melanogaster (Fruit fly)
Length = 429
Score = 38.3 bits (85), Expect = 0.15
Identities = 25/79 (31%), Positives = 35/79 (44%)
Frame = +3
Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
G YN + + C+ CRL+KC VGMS+ R+GR + +I
Sbjct: 30 GRSYNNISTISECKNEGKCIIDKKNRTTCKACRLRKCYNVGMSKGGSRYGR--RSNWFKI 87
Query: 447 LAAMQQSSSSRAHEQAAAA 503
+Q+ HEQAAAA
Sbjct: 88 HCLLQE------HEQAAAA 100
>UniRef50_P49867 Cluster: Nuclear hormone receptor FTZ-F1; n=4;
Endopterygota|Rep: Nuclear hormone receptor FTZ-F1 -
Bombyx mori (Silk moth)
Length = 534
Score = 38.3 bits (85), Expect = 0.15
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 10/49 (20%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVR----------FGRVPKREKARILAAMQQ 464
RC +CR +KC+ VGM +AVR FG + KR++AR L M+Q
Sbjct: 140 RCPFCRFQKCLDVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQMMRQ 188
>UniRef50_UPI00015B6336 Cluster: PREDICTED: similar to zinc finger
transcription factor; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to zinc finger transcription factor -
Nasonia vitripennis
Length = 341
Score = 37.9 bits (84), Expect = 0.20
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
G YN + + V + C+ CRL+KC+ VGMS+ R+GR
Sbjct: 30 GRTYNNLGSISECKNGGVCVINKKNRTACKACRLRKCLMVGMSKSGSRYGR 80
>UniRef50_UPI0000F21183 Cluster: PREDICTED: similar to Hnf4a
protein; n=1; Danio rerio|Rep: PREDICTED: similar to
Hnf4a protein - Danio rerio
Length = 488
Score = 37.9 bits (84), Expect = 0.20
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131
>UniRef50_UPI0000DB74D6 Cluster: PREDICTED: similar to nuclear
receptor subfamily 2, group E, member 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to nuclear receptor
subfamily 2, group E, member 1 - Apis mellifera
Length = 351
Score = 37.9 bits (84), Expect = 0.20
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
N C YCRLKKC VGM+ AV+ R P R + +I A
Sbjct: 62 NWCPYCRLKKCFTVGMNTAAVQEERGP-RVRTKIAA 96
>UniRef50_UPI0000DB7437 Cluster: PREDICTED: similar to
Knirps-related protein; n=1; Apis mellifera|Rep:
PREDICTED: similar to Knirps-related protein - Apis
mellifera
Length = 422
Score = 37.9 bits (84), Expect = 0.20
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
G YN + + V + C+ CRL+KC+ VGMS+ R+GR
Sbjct: 30 GRTYNNLGSISECKNGGVCVINKKNRTACKACRLRKCLMVGMSKSGSRYGR 80
>UniRef50_UPI0000DB7436 Cluster: PREDICTED: similar to
Knirps-related protein; n=1; Apis mellifera|Rep:
PREDICTED: similar to Knirps-related protein - Apis
mellifera
Length = 423
Score = 37.9 bits (84), Expect = 0.20
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
G YN + + V + C+ CRL+KC+ VGMS+ R+GR
Sbjct: 81 GRTYNNLGSISECKNGGVCVINKKNRTACKACRLRKCLMVGMSKSGSRYGR 131
>UniRef50_Q5RZV7 Cluster: Thyroid hormone receptor beta; n=7;
Euteleostomi|Rep: Thyroid hormone receptor beta -
Pseudopleuronectes americanus (Winter flounder)
(Pleuronectesamericanus)
Length = 415
Score = 37.9 bits (84), Expect = 0.20
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV 407
+T N+CQ CR KKCI VGM+ D V
Sbjct: 81 VTRNQCQECRFKKCIVVGMATDLV 104
>UniRef50_Q8MXH2 Cluster: Nuclear hormone receptor family protein
66, isoform c; n=10; Caenorhabditis|Rep: Nuclear hormone
receptor family protein 66, isoform c - Caenorhabditis
elegans
Length = 733
Score = 37.9 bits (84), Expect = 0.20
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 318 SVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
+VV G G +C+ CR +KCI+ GM +++V+ R
Sbjct: 312 TVVKDGSAGQKCRACRFRKCISSGMDKNSVQHRR 345
>UniRef50_Q91766 Cluster: Hepatocyte nuclear factor 4-alpha; n=5;
Euteleostomi|Rep: Hepatocyte nuclear factor 4-alpha -
Xenopus laevis (African clawed frog)
Length = 464
Score = 37.9 bits (84), Expect = 0.20
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131
>UniRef50_P49698 Cluster: Hepatocyte nuclear factor 4-alpha; n=41;
Eumetazoa|Rep: Hepatocyte nuclear factor 4-alpha - Mus
musculus (Mouse)
Length = 474
Score = 37.9 bits (84), Expect = 0.20
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131
>UniRef50_P41235 Cluster: Hepatocyte nuclear factor 4-alpha; n=63;
Chordata|Rep: Hepatocyte nuclear factor 4-alpha - Homo
sapiens (Human)
Length = 474
Score = 37.9 bits (84), Expect = 0.20
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131
>UniRef50_Q2TUT9 Cluster: Nuclear hormone receptor 4A4-like protein;
n=3; Schistosoma|Rep: Nuclear hormone receptor 4A4-like
protein - Schistosoma mansoni (Blood fluke)
Length = 592
Score = 37.5 bits (83), Expect = 0.26
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
NRC YCR +KC+ VGM ++ VR
Sbjct: 153 NRCHYCRFQKCLKVGMVKEVVR 174
>UniRef50_O61228 Cluster: Thr4 protein; n=2; Tenebrionidae|Rep: Thr4
protein - Tenebrio molitor (Yellow mealworm)
Length = 810
Score = 37.5 bits (83), Expect = 0.26
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVP 425
RC YCR KKCI GM AVR R+P
Sbjct: 451 RCPYCRFKKCIEQGMVLQAVREDRMP 476
>UniRef50_O16890 Cluster: Nuclear hormone receptor family protein
118; n=2; Caenorhabditis elegans|Rep: Nuclear hormone
receptor family protein 118 - Caenorhabditis elegans
Length = 231
Score = 37.5 bits (83), Expect = 0.26
Identities = 24/93 (25%), Positives = 43/93 (46%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRC+ CRL+KC GM A+R R ++ + + + + + + A L
Sbjct: 67 NRCRACRLEKCFRAGMDASAIRNKRAKRKSQPESPCTEEIENRALSWQTEAIIAL----- 121
Query: 525 LLARVVRAHLDTCEFHA*SRRFHASQSFVTVPT 623
L+ + + H +F S +++SFVT+ T
Sbjct: 122 LMQKNGQTHNKLSQFSGASEFNFSTRSFVTLET 154
Score = 34.7 bits (76), Expect = 1.9
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +2
Query: 218 VERDSTKCSCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNE 394
++R SC+ +GFFRRSI +K Y+ C+ + QCSI R EK R +
Sbjct: 25 IQRHYGTVSCNGCKGFFRRSIWEKRTYK-CSFHNQCSIEHKYRNRCRACRLEKCFRAGMD 83
Query: 395 QRCCAIRSCTQTRESAYPRSDAT 463
AIR+ R+S P S T
Sbjct: 84 --ASAIRNKRAKRKS-QPESPCT 103
>UniRef50_O00482 Cluster: Orphan nuclear receptor NR5A2; n=68;
Deuterostomia|Rep: Orphan nuclear receptor NR5A2 - Homo
sapiens (Human)
Length = 541
Score = 37.5 bits (83), Expect = 0.26
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC YCR +KC++VGM +AVR R+
Sbjct: 137 RCPYCRFQKCLSVGMKLEAVRADRM 161
Score = 32.3 bits (70), Expect = 9.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q +Y C +NQ C I + R+ P +K
Sbjct: 107 KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 145
>UniRef50_Q4RQL5 Cluster: Chromosome 2 SCAF15004, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 2
SCAF15004, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 636
Score = 37.1 bits (82), Expect = 0.35
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
NRCQ+CR +KC+ VGM R+ R
Sbjct: 315 NRCQFCRFQKCLVVGMVREGKR 336
>UniRef50_Q9GUI3 Cluster: Nuclear hormone receptor family protein
114, isoform a; n=5; Caenorhabditis|Rep: Nuclear hormone
receptor family protein 114, isoform a - Caenorhabditis
elegans
Length = 418
Score = 37.1 bits (82), Expect = 0.35
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C+YCR +KC++VGM R+A++ R P
Sbjct: 67 CRYCRFEKCLSVGMDRNALQQNRDP 91
>UniRef50_Q23038 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 427
Score = 37.1 bits (82), Expect = 0.35
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR 419
N C+ CR KKCIAVGM+ D V++ R
Sbjct: 112 NVCRDCRYKKCIAVGMTTDNVQYNR 136
>UniRef50_A7L5U9 Cluster: Thyroid hormone receptor; n=2;
Branchiostoma|Rep: Thyroid hormone receptor -
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Length = 431
Score = 37.1 bits (82), Expect = 0.35
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 339 TGNRCQYCRLKKCIAVGMSRDAV--RFGRVPKRE 434
T N+CQ CR KKC+ VGM+ D V RV KR+
Sbjct: 102 TRNQCQECRFKKCVRVGMATDLVLDEQKRVAKRK 135
>UniRef50_Q17771 Cluster: Nuclear hormone receptor family member
nhr-35; n=4; Caenorhabditis|Rep: Nuclear hormone
receptor family member nhr-35 - Caenorhabditis elegans
Length = 542
Score = 37.1 bits (82), Expect = 0.35
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR--VPKREKARILAAMQQSSSSRAHEQAAAAELDDA-P 521
C+YCR KCI+ GM D V+ R + KREK + Q + R + + ++D
Sbjct: 129 CRYCRFMKCISSGMRDDQVQSERDVIGKREKKDNMKTYCQDPTPRTSPELTMSPVEDEYD 188
Query: 522 RLLARVVRAHL 554
+LL ++++ +
Sbjct: 189 QLLESLLKSEM 199
>UniRef50_UPI0000E4834A Cluster: PREDICTED: similar to hormone
receptor beta subunit; TRbeta1; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to hormone receptor
beta subunit; TRbeta1 - Strongylocentrotus purpuratus
Length = 423
Score = 36.7 bits (81), Expect = 0.46
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 339 TGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
T N+CQ CR KKC+ VGM+ D V K ++A I Q++ R E+
Sbjct: 125 TRNQCQQCRYKKCLNVGMAPDLVLNESQRKAKRALI----QENREKRGREE 171
>UniRef50_Q7QCB4 Cluster: ENSANGP00000002992; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000002992 - Anopheles gambiae
str. PEST
Length = 284
Score = 36.7 bits (81), Expect = 0.46
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
N+CQ+CRL+KC+ +GM R+ R + +R+
Sbjct: 31 NQCQFCRLRKCLKMGMRREVSRTNSSSTNKTSRL 64
>UniRef50_A7SBF2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 378
Score = 36.7 bits (81), Expect = 0.46
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRCQ CR KC+ GM ++AV+ R P
Sbjct: 63 NRCQKCRFVKCLTAGMKKEAVQCERKP 89
>UniRef50_P79926 Cluster: Hepatocyte nuclear factor 4-beta; n=7;
Euteleostomi|Rep: Hepatocyte nuclear factor 4-beta -
Xenopus laevis (African clawed frog)
Length = 446
Score = 36.7 bits (81), Expect = 0.46
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRL+KC GM ++AV+
Sbjct: 100 NQCRYCRLRKCFRAGMKKEAVQ 121
>UniRef50_UPI000155BF1B Cluster: PREDICTED: similar to hepatocyte
nuclear factor 4, gamma; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to hepatocyte nuclear
factor 4, gamma - Ornithorhynchus anatinus
Length = 470
Score = 36.3 bits (80), Expect = 0.61
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C++CRLKKC GM ++AV+
Sbjct: 115 NQCRFCRLKKCFRAGMKKEAVQ 136
>UniRef50_UPI00015A41AD Cluster: UPI00015A41AD related cluster; n=1;
Danio rerio|Rep: UPI00015A41AD UniRef100 entry - Danio
rerio
Length = 468
Score = 36.3 bits (80), Expect = 0.61
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRL+KC GM ++AV+
Sbjct: 113 NQCRYCRLRKCFRAGMRKEAVQ 134
>UniRef50_Q966H7 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 431
Score = 36.3 bits (80), Expect = 0.61
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQ 461
C+ CRL++C +GM D +F R P ++K + AA++
Sbjct: 87 CKKCRLQRCFDIGMKIDNFQFERDPYKQKLEMQAALK 123
>UniRef50_Q29PL1 Cluster: GA21482-PA; n=1; Drosophila
pseudoobscura|Rep: GA21482-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 658
Score = 36.3 bits (80), Expect = 0.61
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
N+C+ CRL KC M++DAV+ R P++ K
Sbjct: 65 NQCRACRLAKCFQSAMNKDAVQHERGPRKPK 95
>UniRef50_Q17589 Cluster: Putative uncharacterized protein nhr-17;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein nhr-17 - Caenorhabditis elegans
Length = 396
Score = 36.3 bits (80), Expect = 0.61
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS 467
C++CR KKCI GM R + R KR+K L ++S
Sbjct: 83 CRHCRYKKCIIAGMDRGELSMERRRKRKKLNGLEGSEES 121
>UniRef50_O96680 Cluster: Dissatisfaction; n=2; Drosophila
melanogaster|Rep: Dissatisfaction - Drosophila
melanogaster (Fruit fly)
Length = 693
Score = 36.3 bits (80), Expect = 0.61
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
N+C+ CRL KC M++DAV+ R P++ K
Sbjct: 67 NQCRACRLAKCFQSAMNKDAVQHERGPRKPK 97
>UniRef50_O45910 Cluster: Putative uncharacterized protein nhr-231;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein nhr-231 - Caenorhabditis elegans
Length = 397
Score = 36.3 bits (80), Expect = 0.61
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKA 440
NR+Y + S G C++CR KKCI +GM+ D VR + ++E A
Sbjct: 48 NRKYKCA---QKSGKCDVGAEKATCKFCRYKKCIDLGMTTDNVRAEDITEQEPA 98
>UniRef50_O16884 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 391
Score = 36.3 bits (80), Expect = 0.61
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 306 RRTSSVVSSGLTGNRCQYCRLKKCI-AVGMSRDAVRFGRVPKREKARILAAMQQSSSSR 479
+R S +SS + C+ CR ++CI GMSRD V+ R KR +LA R
Sbjct: 51 KRDSDCISSPELRSICRACRYQRCIDTAGMSRDLVQQRRSEKRTPKYVLALRNGGEDER 109
>UniRef50_A7MAD6 Cluster: PNR-like; n=2; Aedes aegypti|Rep: PNR-like
- Aedes aegypti (Yellowfever mosquito)
Length = 422
Score = 36.3 bits (80), Expect = 0.61
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503
N+CQ CR KC+ M R+AV+ R P+ LAAM + S + A A
Sbjct: 66 NQCQACRFAKCLQANMRREAVQHERAPR--NCAPLAAMNGINPSDFYPSRAFA 116
>UniRef50_Q9BJK5 Cluster: Nuclear hormone receptor family member
nhr-97; n=3; Caenorhabditis|Rep: Nuclear hormone
receptor family member nhr-97 - Caenorhabditis elegans
Length = 439
Score = 36.3 bits (80), Expect = 0.61
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR-VPKREKAR 443
N C+YCR +C+ VGM +AV+ R + KR+K +
Sbjct: 86 NACRYCRFHRCLFVGMKIEAVKMDRKLTKRKKEK 119
>UniRef50_Q17370 Cluster: Nuclear hormone receptor family member
nhr-47; n=2; Caenorhabditis|Rep: Nuclear hormone
receptor family member nhr-47 - Caenorhabditis elegans
Length = 579
Score = 36.3 bits (80), Expect = 0.61
Identities = 12/23 (52%), Positives = 20/23 (86%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR 419
C+YCRL+KC+AVGM +++++ R
Sbjct: 63 CRYCRLQKCLAVGMDKNSIQNDR 85
>UniRef50_UPI00015B458D Cluster: PREDICTED: similar to GA10225-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA10225-PA - Nasonia vitripennis
Length = 1166
Score = 35.9 bits (79), Expect = 0.80
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK-REKA 440
N C +CRLKKC AV M+ AV+ R P+ R KA
Sbjct: 62 NWCPHCRLKKCFAVSMNTAAVQEERGPRSRSKA 94
>UniRef50_A5WYG8 Cluster: Pregnane X receptor; n=5; Danio rerio|Rep:
Pregnane X receptor - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 430
Score = 35.9 bits (79), Expect = 0.80
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSS--SSRAHE 488
S+ V + +CQ CRL+KC+++GM R+ + ++ + +I Q + +
Sbjct: 86 SACVITKSNRRQCQSCRLQKCLSIGMKRELIMSDEAVEKRRLQIRRKRMQEEPVTLTPQQ 145
Query: 489 QAAAAELDDAPRLLARVVRAH 551
+A EL +A + + AH
Sbjct: 146 EAVIQELLNAHKKTFDMTCAH 166
>UniRef50_Q95XH8 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 347
Score = 35.9 bits (79), Expect = 0.80
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +3
Query: 339 TGNRCQYCRLKKCIAVGMSRDAVR----FG-RVPKREKARILAAMQQSSSSRAHEQAAAA 503
T N C+ CRL+KC+ VGM+ +A++ G R PK K R+ A S S +
Sbjct: 69 TRNTCRACRLQKCLNVGMNPNAIQRRDEIGPRKPKVSKHRLTCAQNFSFSGETQNNFSQK 128
Query: 504 ELDDA 518
+ + A
Sbjct: 129 QYNAA 133
>UniRef50_Q7PQN6 Cluster: ENSANGP00000012911; n=2; Culicidae|Rep:
ENSANGP00000012911 - Anopheles gambiae str. PEST
Length = 714
Score = 35.9 bits (79), Expect = 0.80
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV--RFGRVPKREKARILAAMQQSSSSRAHEQAAA 500
+T CQ CRL+KC +GM ++ + +V KR+K A ++ S+ A E +A+
Sbjct: 58 VTRRFCQKCRLEKCFRIGMKKEYIMSEEDKVLKRKKIEQNRAKKRQSNGSASEGSAS 114
>UniRef50_Q61KE7 Cluster: Putative uncharacterized protein CBG09399;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG09399 - Caenorhabditis
briggsae
Length = 484
Score = 35.9 bits (79), Expect = 0.80
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR 419
N C+ CR KKC+AVGM+ D V++ R
Sbjct: 122 NVCRDCRYKKCLAVGMTPDNVQYNR 146
>UniRef50_Q06AL0 Cluster: Estrogen receptor-related receptor; n=1;
Marisa cornuarietis|Rep: Estrogen receptor-related
receptor - Marisa cornuarietis
Length = 424
Score = 35.9 bits (79), Expect = 0.80
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
CQ CR +KC+ VGM R+ VR RV
Sbjct: 141 CQACRFQKCLRVGMLREGVRLDRV 164
>UniRef50_A5Z0M1 Cluster: UNC-55a isoform; n=8; Caenorhabditis|Rep:
UNC-55a isoform - Caenorhabditis elegans
Length = 370
Score = 35.9 bits (79), Expect = 0.80
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+CQYCRL KCI +GM ++ R
Sbjct: 71 NQCQYCRLTKCIRMGMRKEGRR 92
>UniRef50_O18141 Cluster: Nuclear hormone receptor family member
nhr-79; n=3; Caenorhabditis|Rep: Nuclear hormone
receptor family member nhr-79 - Caenorhabditis elegans
Length = 463
Score = 35.9 bits (79), Expect = 0.80
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443
C++CRLKKC GM RD V+ R K +K +
Sbjct: 61 CRHCRLKKCQKAGMMRDLVQAKREIKSDKGK 91
>UniRef50_Q25604 Cluster: Nuclear hormone receptor-like 1; n=1;
Onchocerca volvulus|Rep: Nuclear hormone receptor-like 1
- Onchocerca volvulus
Length = 367
Score = 35.9 bits (79), Expect = 0.80
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRR++QQKI Y+ C ++C I +I+R
Sbjct: 56 KGFFRRTVQQKIVYK-CKSIERCEISKISR 84
>UniRef50_UPI000155C258 Cluster: PREDICTED: similar to
photoreceptor-specific nuclear receptor; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
photoreceptor-specific nuclear receptor -
Ornithorhynchus anatinus
Length = 178
Score = 35.5 bits (78), Expect = 1.1
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDA 404
N+CQ CRL+KC+ GM++DA
Sbjct: 146 NQCQACRLRKCLQAGMNKDA 165
>UniRef50_UPI00015A74A9 Cluster: nuclear receptor subfamily 2, group
E, member 1; n=1; Danio rerio|Rep: nuclear receptor
subfamily 2, group E, member 1 - Danio rerio
Length = 466
Score = 35.5 bits (78), Expect = 1.1
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAV 407
N+C+ CRLKKC+ V M++DA+
Sbjct: 53 NQCRACRLKKCLEVNMNKDAI 73
>UniRef50_Q617F3 Cluster: Putative uncharacterized protein CBG14996;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG14996 - Caenorhabditis
briggsae
Length = 449
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431
NRC+ CRL+KC +VGM +V+ R P +
Sbjct: 70 NRCRACRLQKCYSVGMDEKSVQSERHPAK 98
>UniRef50_Q4H3L1 Cluster: Nuclear receptor; n=1; Ciona
intestinalis|Rep: Nuclear receptor - Ciona intestinalis
(Transparent sea squirt)
Length = 515
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
CQ CR KC+ VGM R+ VR RV
Sbjct: 228 CQSCRFSKCLRVGMLREGVRLDRV 251
>UniRef50_Q2TUU6 Cluster: Thyroid hormone receptor beta; n=2;
Schistosoma mansoni|Rep: Thyroid hormone receptor beta -
Schistosoma mansoni (Blood fluke)
Length = 847
Score = 35.5 bits (78), Expect = 1.1
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 324 VSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503
VS N CQ CR +CI+ GM++D V + K R++ A + + A E + A
Sbjct: 193 VSDKQNRNSCQKCRFDRCISGGMAKDLV-LDEDKRLAKRRLIEANRARKRAEAIEASTAV 251
Query: 504 ELDD 515
+ D
Sbjct: 252 YVTD 255
>UniRef50_Q18392 Cluster: Putative uncharacterized protein C33G8.12;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein C33G8.12 - Caenorhabditis
elegans
Length = 358
Score = 35.5 bits (78), Expect = 1.1
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 282 RRYNTGPARRTSSVVSSGLTGNR-CQYCRLKKCIAVGMSRDAVRFGRVPKREKARIL 449
RRY + S L + C+YCR+ KC+ +GM + V+ P REK +IL
Sbjct: 39 RRYVHSTKQEISCTCDQRLISSHPCRYCRMLKCMKIGMCKTQVQ----PPREKNKIL 91
>UniRef50_Q14EL7 Cluster: FTZ-F1-alpha; n=10; Eumetazoa|Rep:
FTZ-F1-alpha - Schistosoma mansoni (Blood fluke)
Length = 1892
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC YCR +KC+ VGM +AVR R+
Sbjct: 160 RCAYCRFQKCLIVGMRVEAVREDRM 184
>UniRef50_A5JPH1 Cluster: Estrogen receptor; n=1; Branchiostoma
floridae|Rep: Estrogen receptor - Branchiostoma floridae
(Florida lancelet) (Amphioxus)
Length = 491
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFG--RVPKREK 437
CQ CR +KC+ VGM++D R G R P+R++
Sbjct: 136 CQACRYRKCLMVGMTKDGRRSGERRGPRRKR 166
>UniRef50_A1ZA02 Cluster: CG16801-PA, isoform A; n=1; Drosophila
melanogaster|Rep: CG16801-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 532
Score = 35.5 bits (78), Expect = 1.1
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRD 401
N+CQ CRLKKC+ +GM++D
Sbjct: 280 NQCQACRLKKCLQMGMNKD 298
>UniRef50_O02235 Cluster: Nuclear hormone receptor family member
nhr-89; n=1; Caenorhabditis elegans|Rep: Nuclear hormone
receptor family member nhr-89 - Caenorhabditis elegans
Length = 310
Score = 35.5 bits (78), Expect = 1.1
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = +3
Query: 222 KETLLNVAVTRRASSGDLYNRRYNTG---PARRTSSVVSSGLTGNRCQYCRLKKCIAVGM 392
K T + +T S + R N PA + +++ C+ CR KC+ GM
Sbjct: 15 KGTRRHFGITACMSCSSFFRRSLNCKFYCPANNSCTILDD--QKQFCRSCRYNKCVQSGM 72
Query: 393 SRDAVR---FGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLAR 536
RD VR + R R++A+ A + S ++E+ + +A +AR
Sbjct: 73 RRDCVRKQSYRRQAGRKEAKSPAVSCSNKLSESYEELLNFYVKEANESIAR 123
>UniRef50_UPI00015B595D Cluster: PREDICTED: similar to CG16801-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG16801-PA - Nasonia vitripennis
Length = 494
Score = 35.1 bits (77), Expect = 1.4
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRD 401
N+CQ CRLKKC+ +GM++D
Sbjct: 230 NQCQACRLKKCMQMGMNKD 248
>UniRef50_UPI0000DC039A Cluster: Steroidogenic factor 1 (STF-1)
(SF-1) (Adrenal 4-binding protein) (Steroid hormone
receptor Ad4BP) (Fushi tarazu factor homolog 1).; n=1;
Rattus norvegicus|Rep: Steroidogenic factor 1 (STF-1)
(SF-1) (Adrenal 4-binding protein) (Steroid hormone
receptor Ad4BP) (Fushi tarazu factor homolog 1). -
Rattus norvegicus
Length = 331
Score = 35.1 bits (77), Expect = 1.4
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC +CR +KC+ VGM +AVR R+
Sbjct: 53 RCPFCRFQKCLTVGMRLEAVRADRM 77
Score = 32.3 bits (70), Expect = 9.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q Y CT++Q C I + R+ P +K
Sbjct: 23 KGFFKRTVQNNKHYT-CTESQSCKIDKTQRKRCPFCRFQK 61
>UniRef50_Q9GTC9 Cluster: Nuclear receptor NHR-88; n=3;
Caenorhabditis elegans|Rep: Nuclear receptor NHR-88 -
Caenorhabditis elegans
Length = 598
Score = 35.1 bits (77), Expect = 1.4
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+YCR ++C+ VGM +A+R
Sbjct: 91 NACRYCRFQRCLTVGMEPEAIR 112
>UniRef50_Q7QKA0 Cluster: ENSANGP00000013419; n=3; Culicidae|Rep:
ENSANGP00000013419 - Anopheles gambiae str. PEST
Length = 278
Score = 35.1 bits (77), Expect = 1.4
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
N C +CRL+KC VGM+ AV+ R P++ + +
Sbjct: 60 NWCPFCRLQKCFLVGMNAAAVQQERGPRKGRKMV 93
>UniRef50_Q61XA5 Cluster: Putative uncharacterized protein CBG04060;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG04060 - Caenorhabditis
briggsae
Length = 502
Score = 35.1 bits (77), Expect = 1.4
Identities = 14/29 (48%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGR-VPKR 431
RCQ CR +C+AVGM++++VR + PK+
Sbjct: 303 RCQACRYARCLAVGMNKESVRITKDEPKK 331
>UniRef50_Q61AX8 Cluster: Putative uncharacterized protein CBG13579;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG13579 - Caenorhabditis
briggsae
Length = 470
Score = 35.1 bits (77), Expect = 1.4
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV--PKREKARILAAMQQ 464
C+YCRL+KC VGM A++ V P++ K++ + Q+
Sbjct: 97 CRYCRLQKCFTVGMKASAIQRRDVMGPRKPKSKDIPIKQE 136
>UniRef50_Q4H3G7 Cluster: Nuclear receptor; n=1; Ciona
intestinalis|Rep: Nuclear receptor - Ciona intestinalis
(Transparent sea squirt)
Length = 504
Score = 35.1 bits (77), Expect = 1.4
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDA 518
CQ CR +KC+ VGM +AVR RV R + + +R A +E+ D+
Sbjct: 61 CQACRFQKCLRVGMKLEAVRRDRV--RGGRNKFGPLYKQDRARKQRLKALSEVHDS 114
>UniRef50_Q1RLF6 Cluster: Nuclear receptor; n=2; Ciona
intestinalis|Rep: Nuclear receptor - Ciona intestinalis
(Transparent sea squirt)
Length = 656
Score = 35.1 bits (77), Expect = 1.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 339 TGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKA 440
T C YCR +KC+ VGM ++ VR R KA
Sbjct: 534 TRTHCPYCRYQKCLRVGMIKNVVRTDPHQSRRKA 567
>UniRef50_A7SVT5 Cluster: Predicted protein; n=2; Actiniaria|Rep:
Predicted protein - Nematostella vectensis
Length = 347
Score = 35.1 bits (77), Expect = 1.4
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRD 401
NRCQYCR +KCI GM ++
Sbjct: 66 NRCQYCRFQKCIQAGMIKE 84
>UniRef50_A7SD88 Cluster: Predicted protein; n=4; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 340
Score = 35.1 bits (77), Expect = 1.4
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
N+CQ CR KKC+ V M+R AV+ R P
Sbjct: 59 NQCQACRFKKCLEVKMNRFAVQQERQP 85
>UniRef50_P18119 Cluster: Thyroid hormone receptor beta-B; n=19;
Tetrapoda|Rep: Thyroid hormone receptor beta-B - Xenopus
laevis (African clawed frog)
Length = 414
Score = 35.1 bits (77), Expect = 1.4
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV 407
+T N+CQ CR KKC VGM+ D V
Sbjct: 109 VTRNQCQECRFKKCKTVGMATDLV 132
>UniRef50_Q13285 Cluster: Steroidogenic factor 1; n=59;
Euteleostomi|Rep: Steroidogenic factor 1 - Homo sapiens
(Human)
Length = 461
Score = 35.1 bits (77), Expect = 1.4
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC +CR +KC+ VGM +AVR R+
Sbjct: 64 RCPFCRFQKCLTVGMRLEAVRADRM 88
Score = 32.3 bits (70), Expect = 9.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q Y CT++Q C I + R+ P +K
Sbjct: 34 KGFFKRTVQNNKHYT-CTESQSCKIDKTQRKRCPFCRFQK 72
>UniRef50_O02151 Cluster: Nuclear hormone receptor family member
nhr-14; n=3; Caenorhabditis|Rep: Nuclear hormone
receptor family member nhr-14 - Caenorhabditis elegans
Length = 435
Score = 35.1 bits (77), Expect = 1.4
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
N C+YCR +KC+A GM +A+ + E+ RI + ++ S E + +E +P+
Sbjct: 70 NACRYCRFQKCLADGMKPEAI------QNERDRIGSTKRRKRSGANSENNSDSEGTPSPK 123
Query: 525 L 527
+
Sbjct: 124 I 124
Score = 33.9 bits (74), Expect = 3.2
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRES 349
+GFFRRS+ Q +QY C N+QC+I + +R +
Sbjct: 41 KGFFRRSVWQNLQY-TCRFNKQCNIDKDHRNA 71
>UniRef50_P41999 Cluster: Nuclear hormone receptor family member
nhr-10; n=9; Caenorhabditis|Rep: Nuclear hormone
receptor family member nhr-10 - Caenorhabditis elegans
Length = 395
Score = 35.1 bits (77), Expect = 1.4
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C++CR +KC+ VGM R+A++ R P
Sbjct: 70 CRHCRFEKCLQVGMDRNAIQQNRDP 94
>UniRef50_Q6Q6F3 Cluster: Estrogen-related receptor delta; n=3;
Danio rerio|Rep: Estrogen-related receptor delta - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 344
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
CQ CR +KC+ GM R+ VR RV
Sbjct: 66 CQACRFQKCLRAGMMREGVRMDRV 89
>UniRef50_O42550 Cluster: PPARG; n=12; Clupeocephala|Rep: PPARG -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 44
Score = 34.7 bits (76), Expect = 1.9
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMS 395
N+CQYCR +KC VGMS
Sbjct: 28 NKCQYCRFQKCFPVGMS 44
>UniRef50_Q9VI12 Cluster: CG10296-PA; n=2; Sophophora|Rep:
CG10296-PA - Drosophila melanogaster (Fruit fly)
Length = 278
Score = 34.7 bits (76), Expect = 1.9
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
N C CR ++C+AVGM+ AV+ R P+ ++ +A + QAA + +
Sbjct: 58 NWCPSCRFQRCLAVGMNAAAVQEERGPRNQQ---VALYRTGRRQAPPSQAAPSPTPHSQA 114
Query: 525 LLARVVRAHLDTC 563
L +++ L TC
Sbjct: 115 LHFQILAQILVTC 127
>UniRef50_Q9GTG3 Cluster: Nuclear receptor NHR-50; n=2;
Caenorhabditis elegans|Rep: Nuclear receptor NHR-50 -
Caenorhabditis elegans
Length = 116
Score = 34.7 bits (76), Expect = 1.9
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR---VPKREKARILAAMQQSSSS 476
C+ CR+KKC+++GM+ + V+ R PK+ K ++ SSSS
Sbjct: 52 CRECRIKKCLSIGMNPEKVQEKRERHPPKKNKPPSISEALTSSSS 96
>UniRef50_Q95YJ6 Cluster: Nuclear receptor 1; n=1; Ciona
savignyi|Rep: Nuclear receptor 1 - Ciona savignyi
(Pacific transparent sea squirt)
Length = 600
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAV 407
N+CQ CR KKCI GM+ D V
Sbjct: 97 NQCQLCRYKKCITTGMATDLV 117
>UniRef50_Q61R49 Cluster: Putative uncharacterized protein CBG06732;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG06732 - Caenorhabditis
briggsae
Length = 303
Score = 34.7 bits (76), Expect = 1.9
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPK 428
RCQ CR KKCI VGM+ A+ K
Sbjct: 63 RCQSCRFKKCIEVGMNSKALELNETEK 89
>UniRef50_Q21700 Cluster: Putative uncharacterized protein nhr-205;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein nhr-205 - Caenorhabditis elegans
Length = 387
Score = 34.7 bits (76), Expect = 1.9
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR-VPKREKARILAAMQQS 467
C+ CRL KC+ +GM R V+ R P++E+ IL +M S
Sbjct: 75 CKSCRLNKCLNLGMKRSCVQPRRDKPQKEEKLILPSMNVS 114
>UniRef50_Q1RL97 Cluster: Nuclear receptor; n=2; Ciona
intestinalis|Rep: Nuclear receptor - Ciona intestinalis
(Transparent sea squirt)
Length = 391
Score = 34.7 bits (76), Expect = 1.9
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
CQ CR C+A GM+ + + K R L M + S QA +D+ L+
Sbjct: 43 CQACRFNACLAAGMNSSLILSDE--EVNKKRDLIRMNREKSGSKQPQATRMTMDE-KLLV 99
Query: 531 ARVVRAHLDTCEF 569
+++ H D+ +F
Sbjct: 100 KTLLKGHRDSYDF 112
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,643,967
Number of Sequences: 1657284
Number of extensions: 9356456
Number of successful extensions: 34485
Number of sequences better than 10.0: 309
Number of HSP's better than 10.0 without gapping: 32856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34452
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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