SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0965
         (629 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P50239 Cluster: Ecdysone-inducible protein E75; n=17; E...   146   3e-34
UniRef50_Q0JRL0 Cluster: Ecdysone-induced protein 75C; n=8; Coel...   136   5e-31
UniRef50_P13055 Cluster: Ecdysone-induced protein 75B isoform B;...   134   1e-30
UniRef50_Q3I5Q8 Cluster: E75 nuclear receptor; n=1; Gecarcinus l...   119   5e-26
UniRef50_O77245 Cluster: Nuclear hormone receptor E75; n=9; Coel...   118   1e-25
UniRef50_Q9XUK7 Cluster: Nuclear hormone receptor family member ...    79   9e-14
UniRef50_Q4RW38 Cluster: Chromosome 9 SCAF14991, whole genome sh...    78   2e-13
UniRef50_P20393 Cluster: Orphan nuclear receptor NR1D1; n=25; Th...    77   3e-13
UniRef50_Q6TNS3 Cluster: Nuclear receptor subfamily 1, group D, ...    76   6e-13
UniRef50_Q4RXZ3 Cluster: Chromosome 11 SCAF14979, whole genome s...    76   6e-13
UniRef50_UPI0000F1EFB0 Cluster: PREDICTED: similar to Rev-Erb be...    73   4e-12
UniRef50_Q90Z65 Cluster: Rev-Erb beta 1; n=5; Euteleostomi|Rep: ...    73   4e-12
UniRef50_Q1L684 Cluster: Rev-erbgamma-A; n=7; Clupeocephala|Rep:...    73   4e-12
UniRef50_Q14995 Cluster: Orphan nuclear receptor NR1D2; n=48; Eu...    73   4e-12
UniRef50_Q90Z63 Cluster: Rev-Erb beta; n=3; Euteleostei|Rep: Rev...    72   1e-11
UniRef50_UPI00004D0DA7 Cluster: Orphan nuclear receptor NR1D2 (R...    68   2e-10
UniRef50_A7LC92 Cluster: Nuclear receptor; n=2; Onchocercidae|Re...    68   2e-10
UniRef50_UPI0000588E36 Cluster: PREDICTED: similar to peroxisome...    66   7e-10
UniRef50_Q4H2X6 Cluster: Nuclear receptor; n=3; Ciona intestinal...    64   2e-09
UniRef50_UPI0000D55BCD Cluster: PREDICTED: similar to CG18023-PA...    64   3e-09
UniRef50_P45447 Cluster: Ecdysone-induced protein 78C; n=5; Dipt...    64   3e-09
UniRef50_A7MAD3 Cluster: Ecdysone-induced protein 78C; n=3; Endo...    63   5e-09
UniRef50_Q4H2V7 Cluster: Nuclear receptor; n=1; Ciona intestinal...    63   6e-09
UniRef50_P51449 Cluster: Nuclear receptor ROR-gamma; n=34; Amnio...    63   6e-09
UniRef50_P35398 Cluster: Nuclear receptor ROR-alpha; n=84; Eutel...    62   8e-09
UniRef50_Q2LYQ2 Cluster: GA14768-PA; n=1; Drosophila pseudoobscu...    62   1e-08
UniRef50_P41828 Cluster: Nuclear hormone receptor family member ...    62   1e-08
UniRef50_Q4RV24 Cluster: Chromosome 15 SCAF14992, whole genome s...    62   1e-08
UniRef50_A1DYE6 Cluster: Nuclear receptor-like protein; n=1; Tri...    62   1e-08
UniRef50_P37231 Cluster: Peroxisome proliferator-activated recep...    62   1e-08
UniRef50_UPI0000F21513 Cluster: PREDICTED: hypothetical protein;...    61   2e-08
UniRef50_Q1L678 Cluster: RORgamma-B; n=13; Euteleostomi|Rep: ROR...    61   2e-08
UniRef50_UPI0000F2CB6C Cluster: PREDICTED: similar to beta-1,4-N...    61   2e-08
UniRef50_P31396 Cluster: Probable nuclear hormone receptor HR3; ...    61   2e-08
UniRef50_UPI0000584695 Cluster: PREDICTED: similar to ecdysone-i...    60   3e-08
UniRef50_Q90Z66 Cluster: Peroxisome proliferator-activated recep...    60   3e-08
UniRef50_Q0KFU8 Cluster: HR3 isoform B1; n=3; Blattella germanic...    60   3e-08
UniRef50_Q967S3 Cluster: Nuclear receptor nhr-7A; n=4; Onchocerc...    60   4e-08
UniRef50_UPI0000E481C8 Cluster: PREDICTED: similar to nuclear ho...    59   8e-08
UniRef50_Q9BWQ7 Cluster: Peroxisome proliferator-activated recep...    59   8e-08
UniRef50_Q07869 Cluster: Peroxisome proliferator-activated recep...    59   8e-08
UniRef50_UPI0000EB467C Cluster: UPI0000EB467C related cluster; n...    58   1e-07
UniRef50_Q90Y02 Cluster: Peroxisome proliferator-activated recep...    58   1e-07
UniRef50_Q4RVW1 Cluster: Chromosome 9 SCAF14991, whole genome sh...    58   1e-07
UniRef50_Q4H2V2 Cluster: Nuclear receptor; n=2; Ciona intestinal...    58   1e-07
UniRef50_O02643 Cluster: Hormone receptor 3C; n=1; Choristoneura...    58   2e-07
UniRef50_Q2TUU3 Cluster: Ecdysone-induced protein E78; n=3; Schi...    58   2e-07
UniRef50_Q4SHA3 Cluster: Chromosome 19 SCAF14584, whole genome s...    57   4e-07
UniRef50_UPI0000E494CA Cluster: PREDICTED: similar to peroxisome...    54   4e-06
UniRef50_Q4SGI2 Cluster: Chromosome undetermined SCAF14594, whol...    53   7e-06
UniRef50_UPI0000586F42 Cluster: PREDICTED: similar to GA17350-PA...    52   9e-06
UniRef50_UPI00005864C9 Cluster: PREDICTED: similar to E75 nuclea...    52   9e-06
UniRef50_Q66MI8 Cluster: COUP-TF1 nuclear orphan receptor; n=2; ...    52   1e-05
UniRef50_UPI0000E4819E Cluster: PREDICTED: similar to Nr1h3 prot...    51   2e-05
UniRef50_Q1W404 Cluster: RAR-like nuclear receptor; n=5; Schisto...    51   2e-05
UniRef50_P13631 Cluster: Retinoic acid receptor gamma-1; n=5; Co...    51   2e-05
UniRef50_Q4REU2 Cluster: Chromosome 13 SCAF15122, whole genome s...    50   3e-05
UniRef50_P10589 Cluster: COUP transcription factor 1; n=130; Eum...    49   8e-05
UniRef50_P16376 Cluster: Steroid receptor seven-up, isoform A; n...    49   8e-05
UniRef50_Q611B9 Cluster: Putative uncharacterized protein CBG171...    49   1e-04
UniRef50_A7S1X4 Cluster: Predicted protein; n=1; Nematostella ve...    49   1e-04
UniRef50_P10276 Cluster: Retinoic acid receptor alpha; n=207; Eu...    49   1e-04
UniRef50_UPI0000F2CA65 Cluster: PREDICTED: similar to DNA (cytos...    48   2e-04
UniRef50_Q26641 Cluster: COUP transcription factor; n=2; Strongy...    48   2e-04
UniRef50_UPI0000EB22C7 Cluster: UPI0000EB22C7 related cluster; n...    47   3e-04
UniRef50_Q173C6 Cluster: Expressed protein; n=1; Aedes aegypti|R...    47   3e-04
UniRef50_Q8I748 Cluster: Retinoid X receptor; n=1; Suberites dom...    47   4e-04
UniRef50_Q52ZN9 Cluster: Nuclear receptor usp/RXR; n=2; Coelomat...    46   6e-04
UniRef50_A1ZA01 Cluster: CG16801-PB, isoform B; n=5; Endopterygo...    46   6e-04
UniRef50_Q4H2W2 Cluster: Nuclear receptor; n=4; Ascidiacea|Rep: ...    46   7e-04
UniRef50_Q4H2U9 Cluster: Nuclear receptor; n=9; Coelomata|Rep: N...    46   7e-04
UniRef50_Q9Y5X4 Cluster: Photoreceptor-specific nuclear receptor...    46   7e-04
UniRef50_Q24142 Cluster: Nuclear hormone receptor HR78; n=4; Sop...    46   7e-04
UniRef50_UPI0000D8B087 Cluster: UPI0000D8B087 related cluster; n...    46   0.001
UniRef50_P13056 Cluster: Orphan nuclear receptor TR2; n=78; Eute...    46   0.001
UniRef50_UPI000065F8EB Cluster: Homolog of Gallus gallus "Nuclea...    45   0.001
UniRef50_O77230 Cluster: Nuclear hormone receptor; n=1; Brugia p...    45   0.002
UniRef50_UPI0000DB6D60 Cluster: PREDICTED: similar to Orphan nuc...    44   0.002
UniRef50_UPI00006A05FD Cluster: Orphan nuclear receptor TR4 (Orp...    44   0.002
UniRef50_Q7Q2K7 Cluster: ENSANGP00000003675; n=1; Anopheles gamb...    44   0.002
UniRef50_A7TAF5 Cluster: Predicted protein; n=1; Nematostella ve...    44   0.002
UniRef50_A7MAD8 Cluster: Hormone receptor-like in 4; n=3; Aedes ...    44   0.002
UniRef50_O76202 Cluster: Protein ultraspiracle homolog; n=5; Dit...    44   0.002
UniRef50_Q9W539 Cluster: Hormone receptor 4; n=2; Pancrustacea|R...    44   0.002
UniRef50_Q95WG3 Cluster: Nuclear receptor AmNR2; n=2; Hexacorall...    44   0.003
UniRef50_Q4KXQ1 Cluster: TR4/TR2; n=11; Eumetazoa|Rep: TR4/TR2 -...    44   0.003
UniRef50_Q17K29 Cluster: Nuclear hormone receptor; n=2; Culicida...    44   0.003
UniRef50_O61227 Cluster: Nuclear receptor; n=1; Tenebrio molitor...    44   0.003
UniRef50_A7S286 Cluster: Predicted protein; n=1; Nematostella ve...    44   0.003
UniRef50_UPI0000E479AD Cluster: PREDICTED: similar to MGC79469 p...    44   0.004
UniRef50_Q703I8 Cluster: Zinc finger transcription factor; n=2; ...    44   0.004
UniRef50_P90892 Cluster: Defective fasciculation of axons protei...    44   0.004
UniRef50_P18102 Cluster: Protein tailless; n=10; Diptera|Rep: Pr...    44   0.004
UniRef50_Q15406 Cluster: Orphan nuclear receptor NR6A1; n=53; Eu...    44   0.004
UniRef50_Q90WV5 Cluster: Photoreceptor-specific nuclear receptor...    43   0.005
UniRef50_A5HL80 Cluster: Retinoid X receptor alpha 2; n=2; Clupe...    43   0.005
UniRef50_Q16IX1 Cluster: Putative uncharacterized protein; n=1; ...    43   0.005
UniRef50_UPI000051A33D Cluster: PREDICTED: similar to photorecep...    43   0.007
UniRef50_UPI000065FDEF Cluster: Homolog of Gallus gallus "Nuclea...    43   0.007
UniRef50_Q95WG1 Cluster: Nuclear receptor AmNR4 isoform A; n=3; ...    43   0.007
UniRef50_Q617F2 Cluster: Putative uncharacterized protein CBG149...    43   0.007
UniRef50_Q4H3F3 Cluster: Nuclear receptor; n=1; Ciona intestinal...    43   0.007
UniRef50_P28702 Cluster: Retinoic acid receptor RXR-beta; n=240;...    43   0.007
UniRef50_Q9XVV3 Cluster: Nuclear hormone receptor family member ...    43   0.007
UniRef50_P41830 Cluster: Steroid hormone receptor family member ...    43   0.007
UniRef50_UPI0000DB6EB1 Cluster: PREDICTED: similar to Nuclear Ho...    42   0.009
UniRef50_Q9NCL0 Cluster: Tailless ortholog; n=3; Coelomata|Rep: ...    42   0.009
UniRef50_Q95WF8 Cluster: Nuclear receptor AmNR6; n=2; Astrocoeni...    42   0.009
UniRef50_Q8WSJ4 Cluster: Hormone receptor 4; n=3; Obtectomera|Re...    42   0.009
UniRef50_Q26622 Cluster: Orphan steroid hormone receptor 2; n=7;...    42   0.009
UniRef50_P13054 Cluster: Knirps-related protein; n=2; Sophophora...    42   0.009
UniRef50_UPI00015B573C Cluster: PREDICTED: similar to thr4; n=1;...    42   0.012
UniRef50_UPI0000588887 Cluster: PREDICTED: similar to GA10225-PA...    42   0.012
UniRef50_Q4T0V6 Cluster: Chromosome undetermined SCAF10841, whol...    42   0.012
UniRef50_Q4RXK2 Cluster: Chromosome 11 SCAF14979, whole genome s...    42   0.012
UniRef50_Q4U1Y2 Cluster: Steroid hormone receptor 3; n=1; Strong...    42   0.012
UniRef50_Q0IGD6 Cluster: Tailless; n=1; Aedes aegypti|Rep: Taill...    42   0.012
UniRef50_A7S012 Cluster: Predicted protein; n=1; Nematostella ve...    42   0.012
UniRef50_P49116 Cluster: Orphan nuclear receptor TR4; n=13; Eume...    42   0.012
UniRef50_P43354 Cluster: Orphan nuclear receptor NR4A2; n=77; Eu...    42   0.012
UniRef50_Q10902 Cluster: Nuclear hormone receptor family member ...    42   0.012
UniRef50_UPI00015B4A62 Cluster: PREDICTED: similar to nuclear re...    42   0.016
UniRef50_UPI0000DB771B Cluster: PREDICTED: similar to Hormone re...    42   0.016
UniRef50_Q98ST8 Cluster: Ff1c; n=6; Clupeocephala|Rep: Ff1c - Da...    42   0.016
UniRef50_Q7ZZY9 Cluster: Vitamin D receptor; n=1; Petromyzon mar...    42   0.016
UniRef50_Q4SD43 Cluster: Chromosome 1 SCAF14643, whole genome sh...    42   0.016
UniRef50_Q49MA6 Cluster: Nuclear receptor 2DBD-gamma; n=3; Bilat...    42   0.016
UniRef50_Q1RPY8 Cluster: Nuclear receptor; n=2; Ciona intestinal...    42   0.016
UniRef50_Q92570 Cluster: Orphan nuclear receptor NR4A3; n=26; Eu...    42   0.016
UniRef50_Q9Y466 Cluster: Orphan nuclear receptor NR2E1; n=38; Eu...    42   0.016
UniRef50_P15370 Cluster: Protein embryonic gonad; n=2; Sophophor...    42   0.016
UniRef50_UPI0000E47369 Cluster: PREDICTED: similar to ROR-alpha ...    37   0.018
UniRef50_Q7PUT9 Cluster: ENSANGP00000017626; n=12; Endopterygota...    41   0.021
UniRef50_A0NCV2 Cluster: ENSANGP00000031834; n=2; Culicidae|Rep:...    41   0.021
UniRef50_P10827 Cluster: Thyroid hormone receptor alpha; n=186; ...    41   0.021
UniRef50_Q9N4B8 Cluster: Nuclear hormone receptor family member ...    41   0.021
UniRef50_UPI0000F1FFCD Cluster: PREDICTED: neural orphan nuclear...    41   0.028
UniRef50_UPI0000D55997 Cluster: PREDICTED: similar to Knirps-rel...    41   0.028
UniRef50_UPI0000D556F1 Cluster: PREDICTED: similar to CG9019-PA;...    41   0.028
UniRef50_UPI0000584A1E Cluster: PREDICTED: similar to nuclear re...    41   0.028
UniRef50_UPI000051A1CD Cluster: PREDICTED: similar to Knirps-rel...    41   0.028
UniRef50_Q4RI46 Cluster: Chromosome 8 SCAF15044, whole genome sh...    41   0.028
UniRef50_Q2M0D5 Cluster: GA17924-PA; n=1; Drosophila pseudoobscu...    41   0.028
UniRef50_O96562 Cluster: Retinoic acid X receptor; n=1; Tripedal...    41   0.028
UniRef50_Q20765 Cluster: Nuclear hormone receptor family member ...    41   0.028
UniRef50_O45666 Cluster: Nuclear hormone receptor family member ...    41   0.028
UniRef50_P33244 Cluster: Nuclear hormone receptor FTZ-F1; n=4; C...    41   0.028
UniRef50_UPI0000E4A84F Cluster: PREDICTED: similar to retinoic X...    40   0.037
UniRef50_Q90Y24 Cluster: Thyroid hormone receptor alpha small is...    40   0.037
UniRef50_Q4RI90 Cluster: Chromosome 8 SCAF15044, whole genome sh...    40   0.037
UniRef50_Q9NB03 Cluster: Nuclear receptor FTZ-F1 protein; n=2; A...    40   0.037
UniRef50_Q4H333 Cluster: Nuclear receptor; n=2; Coelomata|Rep: N...    40   0.037
UniRef50_Q3I5Q0 Cluster: RXRc nuclear hormone receptor; n=4; Dec...    40   0.037
UniRef50_UPI0000E460D2 Cluster: PREDICTED: similar to orphan nuc...    40   0.049
UniRef50_UPI0000DB6F53 Cluster: PREDICTED: similar to nuclear re...    40   0.049
UniRef50_Q9Y1J4 Cluster: Retinoid X receptor RXR-2; n=10; Bilate...    40   0.049
UniRef50_Q9Y0D1 Cluster: Fushi tarazu-factor 1; n=4; Pancrustace...    40   0.049
UniRef50_Q8ST32 Cluster: Nuclear receptor RXR; n=1; Dirofilaria ...    40   0.049
UniRef50_Q2TUU9 Cluster: Two-DBD-nuclear receptor; n=3; Schistos...    40   0.049
UniRef50_Q4SGI3 Cluster: Chromosome undetermined SCAF14594, whol...    40   0.065
UniRef50_A7RX15 Cluster: Predicted protein; n=1; Nematostella ve...    40   0.065
UniRef50_P20153 Cluster: Protein ultraspiracle; n=6; Schizophora...    40   0.065
UniRef50_Q9U2R6 Cluster: Nuclear hormone receptor family member ...    40   0.065
UniRef50_P41829 Cluster: Nuclear hormone receptor family member ...    40   0.065
UniRef50_UPI0000587672 Cluster: PREDICTED: similar to tailless; ...    39   0.086
UniRef50_Q49MV3 Cluster: Nuclear receptor 2DBD-beta; n=2; Schist...    39   0.086
UniRef50_P49869 Cluster: Probable nuclear hormone receptor HR38;...    39   0.086
UniRef50_O42554 Cluster: ReverbB; n=2; Danio rerio|Rep: ReverbB ...    39   0.11 
UniRef50_O45117 Cluster: Ultraspiracle; n=3; Endopterygota|Rep: ...    39   0.11 
UniRef50_Q8T7Y2 Cluster: Nuclear orphan receptor; n=1; Bombyx mo...    38   0.15 
UniRef50_O77154 Cluster: Nuclear receptor 1; n=2; Ciona intestin...    38   0.15 
UniRef50_A7J001 Cluster: Rxr1; n=1; Oikopleura dioica|Rep: Rxr1 ...    38   0.15 
UniRef50_O17611 Cluster: Nuclear hormone receptor family member ...    38   0.15 
UniRef50_P10734 Cluster: Zygotic gap protein knirps; n=10; Schiz...    38   0.15 
UniRef50_P49867 Cluster: Nuclear hormone receptor FTZ-F1; n=4; E...    38   0.15 
UniRef50_UPI00015B6336 Cluster: PREDICTED: similar to zinc finge...    38   0.20 
UniRef50_UPI0000F21183 Cluster: PREDICTED: similar to Hnf4a prot...    38   0.20 
UniRef50_UPI0000DB74D6 Cluster: PREDICTED: similar to nuclear re...    38   0.20 
UniRef50_UPI0000DB7437 Cluster: PREDICTED: similar to Knirps-rel...    38   0.20 
UniRef50_UPI0000DB7436 Cluster: PREDICTED: similar to Knirps-rel...    38   0.20 
UniRef50_Q5RZV7 Cluster: Thyroid hormone receptor beta; n=7; Eut...    38   0.20 
UniRef50_Q8MXH2 Cluster: Nuclear hormone receptor family protein...    38   0.20 
UniRef50_Q91766 Cluster: Hepatocyte nuclear factor 4-alpha; n=5;...    38   0.20 
UniRef50_P49698 Cluster: Hepatocyte nuclear factor 4-alpha; n=41...    38   0.20 
UniRef50_P41235 Cluster: Hepatocyte nuclear factor 4-alpha; n=63...    38   0.20 
UniRef50_Q2TUT9 Cluster: Nuclear hormone receptor 4A4-like prote...    38   0.26 
UniRef50_O61228 Cluster: Thr4 protein; n=2; Tenebrionidae|Rep: T...    38   0.26 
UniRef50_O16890 Cluster: Nuclear hormone receptor family protein...    38   0.26 
UniRef50_O00482 Cluster: Orphan nuclear receptor NR5A2; n=68; De...    38   0.26 
UniRef50_Q4RQL5 Cluster: Chromosome 2 SCAF15004, whole genome sh...    37   0.35 
UniRef50_Q9GUI3 Cluster: Nuclear hormone receptor family protein...    37   0.35 
UniRef50_Q23038 Cluster: Putative uncharacterized protein; n=1; ...    37   0.35 
UniRef50_A7L5U9 Cluster: Thyroid hormone receptor; n=2; Branchio...    37   0.35 
UniRef50_Q17771 Cluster: Nuclear hormone receptor family member ...    37   0.35 
UniRef50_UPI0000E4834A Cluster: PREDICTED: similar to hormone re...    37   0.46 
UniRef50_Q7QCB4 Cluster: ENSANGP00000002992; n=1; Anopheles gamb...    37   0.46 
UniRef50_A7SBF2 Cluster: Predicted protein; n=1; Nematostella ve...    37   0.46 
UniRef50_P79926 Cluster: Hepatocyte nuclear factor 4-beta; n=7; ...    37   0.46 
UniRef50_UPI000155BF1B Cluster: PREDICTED: similar to hepatocyte...    36   0.61 
UniRef50_UPI00015A41AD Cluster: UPI00015A41AD related cluster; n...    36   0.61 
UniRef50_Q966H7 Cluster: Putative uncharacterized protein; n=3; ...    36   0.61 
UniRef50_Q29PL1 Cluster: GA21482-PA; n=1; Drosophila pseudoobscu...    36   0.61 
UniRef50_Q17589 Cluster: Putative uncharacterized protein nhr-17...    36   0.61 
UniRef50_O96680 Cluster: Dissatisfaction; n=2; Drosophila melano...    36   0.61 
UniRef50_O45910 Cluster: Putative uncharacterized protein nhr-23...    36   0.61 
UniRef50_O16884 Cluster: Putative uncharacterized protein; n=1; ...    36   0.61 
UniRef50_A7MAD6 Cluster: PNR-like; n=2; Aedes aegypti|Rep: PNR-l...    36   0.61 
UniRef50_Q9BJK5 Cluster: Nuclear hormone receptor family member ...    36   0.61 
UniRef50_Q17370 Cluster: Nuclear hormone receptor family member ...    36   0.61 
UniRef50_UPI00015B458D Cluster: PREDICTED: similar to GA10225-PA...    36   0.80 
UniRef50_A5WYG8 Cluster: Pregnane X receptor; n=5; Danio rerio|R...    36   0.80 
UniRef50_Q95XH8 Cluster: Putative uncharacterized protein; n=1; ...    36   0.80 
UniRef50_Q7PQN6 Cluster: ENSANGP00000012911; n=2; Culicidae|Rep:...    36   0.80 
UniRef50_Q61KE7 Cluster: Putative uncharacterized protein CBG093...    36   0.80 
UniRef50_Q06AL0 Cluster: Estrogen receptor-related receptor; n=1...    36   0.80 
UniRef50_A5Z0M1 Cluster: UNC-55a isoform; n=8; Caenorhabditis|Re...    36   0.80 
UniRef50_O18141 Cluster: Nuclear hormone receptor family member ...    36   0.80 
UniRef50_Q25604 Cluster: Nuclear hormone receptor-like 1; n=1; O...    36   0.80 
UniRef50_UPI000155C258 Cluster: PREDICTED: similar to photorecep...    36   1.1  
UniRef50_UPI00015A74A9 Cluster: nuclear receptor subfamily 2, gr...    36   1.1  
UniRef50_Q617F3 Cluster: Putative uncharacterized protein CBG149...    36   1.1  
UniRef50_Q4H3L1 Cluster: Nuclear receptor; n=1; Ciona intestinal...    36   1.1  
UniRef50_Q2TUU6 Cluster: Thyroid hormone receptor beta; n=2; Sch...    36   1.1  
UniRef50_Q18392 Cluster: Putative uncharacterized protein C33G8....    36   1.1  
UniRef50_Q14EL7 Cluster: FTZ-F1-alpha; n=10; Eumetazoa|Rep: FTZ-...    36   1.1  
UniRef50_A5JPH1 Cluster: Estrogen receptor; n=1; Branchiostoma f...    36   1.1  
UniRef50_A1ZA02 Cluster: CG16801-PA, isoform A; n=1; Drosophila ...    36   1.1  
UniRef50_O02235 Cluster: Nuclear hormone receptor family member ...    36   1.1  
UniRef50_UPI00015B595D Cluster: PREDICTED: similar to CG16801-PA...    35   1.4  
UniRef50_UPI0000DC039A Cluster: Steroidogenic factor 1 (STF-1) (...    35   1.4  
UniRef50_Q9GTC9 Cluster: Nuclear receptor NHR-88; n=3; Caenorhab...    35   1.4  
UniRef50_Q7QKA0 Cluster: ENSANGP00000013419; n=3; Culicidae|Rep:...    35   1.4  
UniRef50_Q61XA5 Cluster: Putative uncharacterized protein CBG040...    35   1.4  
UniRef50_Q61AX8 Cluster: Putative uncharacterized protein CBG135...    35   1.4  
UniRef50_Q4H3G7 Cluster: Nuclear receptor; n=1; Ciona intestinal...    35   1.4  
UniRef50_Q1RLF6 Cluster: Nuclear receptor; n=2; Ciona intestinal...    35   1.4  
UniRef50_A7SVT5 Cluster: Predicted protein; n=2; Actiniaria|Rep:...    35   1.4  
UniRef50_A7SD88 Cluster: Predicted protein; n=4; Eumetazoa|Rep: ...    35   1.4  
UniRef50_P18119 Cluster: Thyroid hormone receptor beta-B; n=19; ...    35   1.4  
UniRef50_Q13285 Cluster: Steroidogenic factor 1; n=59; Euteleost...    35   1.4  
UniRef50_O02151 Cluster: Nuclear hormone receptor family member ...    35   1.4  
UniRef50_P41999 Cluster: Nuclear hormone receptor family member ...    35   1.4  
UniRef50_Q6Q6F3 Cluster: Estrogen-related receptor delta; n=3; D...    35   1.9  
UniRef50_O42550 Cluster: PPARG; n=12; Clupeocephala|Rep: PPARG -...    35   1.9  
UniRef50_Q9VI12 Cluster: CG10296-PA; n=2; Sophophora|Rep: CG1029...    35   1.9  
UniRef50_Q9GTG3 Cluster: Nuclear receptor NHR-50; n=2; Caenorhab...    35   1.9  
UniRef50_Q95YJ6 Cluster: Nuclear receptor 1; n=1; Ciona savignyi...    35   1.9  
UniRef50_Q61R49 Cluster: Putative uncharacterized protein CBG067...    35   1.9  
UniRef50_Q21700 Cluster: Putative uncharacterized protein nhr-20...    35   1.9  
UniRef50_Q1RL97 Cluster: Nuclear receptor; n=2; Ciona intestinal...    35   1.9  
UniRef50_A7S8Y8 Cluster: Predicted protein; n=1; Nematostella ve...    35   1.9  
UniRef50_A7LPI6 Cluster: Putative uncharacterized protein; n=2; ...    35   1.9  
UniRef50_Q94407 Cluster: Nuclear hormone receptor family member ...    35   1.9  
UniRef50_Q9XTJ4 Cluster: Nuclear hormone receptor family member ...    35   1.9  
UniRef50_Q800U8 Cluster: Ff1d; n=5; Clupeocephala|Rep: Ff1d - Da...    34   2.4  
UniRef50_O73631 Cluster: TFZR1; n=3; Euteleostei|Rep: TFZR1 - On...    34   2.4  
UniRef50_Q6VA69 Cluster: EcRA; n=12; Pancrustacea|Rep: EcRA - Ae...    34   2.4  
UniRef50_O16664 Cluster: Putative uncharacterized protein T27B7....    34   2.4  
UniRef50_P11473 Cluster: Vitamin D3 receptor; n=61; Euteleostomi...    34   2.4  
UniRef50_O45460 Cluster: Nuclear hormone receptor family member ...    34   2.4  
UniRef50_Q21006 Cluster: Nuclear hormone receptor family member ...    34   2.4  
UniRef50_O45521 Cluster: Nuclear hormone receptor family member ...    34   2.4  
UniRef50_P34021 Cluster: Ecdysone receptor; n=44; Coelomata|Rep:...    34   2.4  
UniRef50_P49881 Cluster: Ecdysone receptor; n=4; Bombyx mori|Rep...    34   2.4  
UniRef50_UPI0000E4899F Cluster: PREDICTED: hypothetical protein,...    34   3.2  
UniRef50_UPI0000D56354 Cluster: PREDICTED: similar to photorecep...    34   3.2  
UniRef50_Q95Y09 Cluster: Nuclear hormone receptor family protein...    34   3.2  
UniRef50_Q5XTR0 Cluster: Estrogen receptor-related receptor long...    34   3.2  
UniRef50_Q4H2N0 Cluster: Nuclear receptor; n=1; Ciona intestinal...    34   3.2  
UniRef50_Q2TUU7 Cluster: Thyroid hormone receptor alpha; n=5; Sc...    34   3.2  
UniRef50_Q16IU3 Cluster: Estrogen-related receptor; n=1; Aedes a...    34   3.2  
UniRef50_O97120 Cluster: Retinoic acid receptor RXR; n=1; Schist...    34   3.2  
UniRef50_O16961 Cluster: Nuclear hormone receptor family protein...    34   3.2  
UniRef50_A7S1X5 Cluster: Predicted protein; n=1; Nematostella ve...    34   3.2  
UniRef50_A7RZU0 Cluster: Predicted protein; n=1; Nematostella ve...    34   3.2  
UniRef50_O95718 Cluster: Steroid hormone receptor ERR2; n=108; C...    34   3.2  
UniRef50_P11474 Cluster: Steroid hormone receptor ERR1; n=19; Eu...    34   3.2  
UniRef50_UPI0000D5787F Cluster: PREDICTED: similar to CG10296-PA...    33   4.3  
UniRef50_Q8WS79 Cluster: Estrogen-related receptor splice varian...    33   4.3  
UniRef50_O01448 Cluster: Putative uncharacterized protein; n=1; ...    33   4.3  
UniRef50_O45436 Cluster: Nuclear hormone receptor family member ...    33   4.3  
UniRef50_UPI0000D5764D Cluster: PREDICTED: similar to CG11783-PA...    33   5.7  
UniRef50_Q95Y05 Cluster: Nuclear hormone receptor family protein...    33   5.7  
UniRef50_Q86PK8 Cluster: Nuclear receptor NHR-32; n=2; Caenorhab...    33   5.7  
UniRef50_Q61UK4 Cluster: Putative uncharacterized protein CBG052...    33   5.7  
UniRef50_Q611G9 Cluster: Putative uncharacterized protein CBG170...    33   5.7  
UniRef50_Q2L3W9 Cluster: Nuclear receptor; n=9; Arthropoda|Rep: ...    33   5.7  
UniRef50_O44337 Cluster: AamEcRA1; n=2; Amblyomma americanum|Rep...    33   5.7  
UniRef50_A4F2F2 Cluster: Ecdysone receptor A1; n=11; Arthropoda|...    33   5.7  
UniRef50_Q0D1T2 Cluster: Valyl-tRNA synthetase, mitochondrial; n...    33   5.7  
UniRef50_Q18192 Cluster: Nuclear hormone receptor family member ...    33   5.7  
UniRef50_Q9DFH3 Cluster: Xenobiotic receptor; n=4; Amniota|Rep: ...    33   7.5  
UniRef50_Q95QT4 Cluster: Putative uncharacterized protein nhr-13...    33   7.5  
UniRef50_Q18896 Cluster: Nuclear hormone receptor family protein...    33   7.5  
UniRef50_Q18150 Cluster: Nuclear hormone receptor family protein...    33   7.5  
UniRef50_P91829 Cluster: Nuclear hormone receptor family member ...    33   7.5  
UniRef50_Q19345 Cluster: Nuclear hormone receptor family member ...    33   7.5  
UniRef50_Q23294 Cluster: Nuclear hormone receptor family member ...    33   7.5  
UniRef50_UPI00015B40B5 Cluster: PREDICTED: similar to ENSANGP000...    32   9.9  
UniRef50_UPI0000DB70A8 Cluster: PREDICTED: similar to estrogen-r...    32   9.9  
UniRef50_O75469-6 Cluster: Isoform 2C of O75469 ; n=10; Tetrapod...    32   9.9  
UniRef50_Q5LU25 Cluster: Putative uncharacterized protein; n=2; ...    32   9.9  
UniRef50_A3VU60 Cluster: Putative para-aminobenzoate synthase; n...    32   9.9  
UniRef50_Q9XZJ5 Cluster: Nuclear hormone receptor of the steroid...    32   9.9  
UniRef50_Q9UAN6 Cluster: Nuclear receptor NHR-21a; n=7; Caenorha...    32   9.9  
UniRef50_Q9GTC6 Cluster: Nuclear receptor NHR-92; n=5; Caenorhab...    32   9.9  
UniRef50_O45905 Cluster: Putative uncharacterized protein nhr-23...    32   9.9  
UniRef50_O17991 Cluster: Putative uncharacterized protein nhr-26...    32   9.9  
UniRef50_O75469 Cluster: Orphan nuclear receptor PXR; n=32; Ther...    32   9.9  

>UniRef50_P50239 Cluster: Ecdysone-inducible protein E75; n=17;
           Endopterygota|Rep: Ecdysone-inducible protein E75 -
           Galleria mellonella (Wax moth)
          Length = 711

 Score =  147 bits (355), Expect = 3e-34
 Identities = 71/75 (94%), Positives = 73/75 (97%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM QSS++RAHEQAAAAELDD PR
Sbjct: 98  NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-QSSTTRAHEQAAAAELDDGPR 156

Query: 525 LLARVVRAHLDTCEF 569
           LLARVVRAHLDTCEF
Sbjct: 157 LLARVVRAHLDTCEF 171



 Score = 67.7 bits (158), Expect = 2e-10
 Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRSIQQKIQYRPCTKNQQCSILRINR
Sbjct: 63  SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 97


>UniRef50_Q0JRL0 Cluster: Ecdysone-induced protein 75C; n=8;
           Coelomata|Rep: Ecdysone-induced protein 75C - Aedes
           aegypti (Yellowfever mosquito)
          Length = 1134

 Score =  136 bits (328), Expect = 5e-31
 Identities = 62/75 (82%), Positives = 69/75 (92%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS+ +R +++A A ELDD PR
Sbjct: 315 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGNQRALATELDDQPR 374

Query: 525 LLARVVRAHLDTCEF 569
           LLA V+RAH+DTCEF
Sbjct: 375 LLAAVLRAHMDTCEF 389



 Score = 67.7 bits (158), Expect = 2e-10
 Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRSIQQKIQYRPCTKNQQCSILRINR
Sbjct: 280 SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 314


>UniRef50_P13055 Cluster: Ecdysone-induced protein 75B isoform B;
           n=10; Coelomata|Rep: Ecdysone-induced protein 75B
           isoform B - Drosophila melanogaster (Fruit fly)
          Length = 1412

 Score =  134 bits (325), Expect = 1e-30
 Identities = 62/75 (82%), Positives = 68/75 (90%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS+ +R  ++A A ELDD PR
Sbjct: 509 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPR 568

Query: 525 LLARVVRAHLDTCEF 569
           LLA V+RAHL+TCEF
Sbjct: 569 LLAAVLRAHLETCEF 583



 Score = 67.7 bits (158), Expect = 2e-10
 Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRSIQQKIQYRPCTKNQQCSILRINR
Sbjct: 474 SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 508


>UniRef50_Q3I5Q8 Cluster: E75 nuclear receptor; n=1; Gecarcinus
           lateralis|Rep: E75 nuclear receptor - Gecarcinus
           lateralis (Blackback land crab)
          Length = 828

 Score =  119 bits (287), Expect = 5e-26
 Identities = 55/75 (73%), Positives = 66/75 (88%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKA+ILAAM QS ++R+ E+A  AEL+D  R
Sbjct: 83  NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAKILAAM-QSVNARSQERAVLAELEDDTR 141

Query: 525 LLARVVRAHLDTCEF 569
           + A ++RAH+DTC+F
Sbjct: 142 VTAAIIRAHMDTCDF 156



 Score = 67.7 bits (158), Expect = 2e-10
 Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRSIQQKIQYRPCTKNQQCSILRINR
Sbjct: 48  SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 82


>UniRef50_O77245 Cluster: Nuclear hormone receptor E75; n=9;
           Coelomata|Rep: Nuclear hormone receptor E75 -
           Metapenaeus ensis (Greasyback shrimp) (Sand shrimp)
          Length = 606

 Score =  118 bits (284), Expect = 1e-25
 Identities = 54/75 (72%), Positives = 66/75 (88%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKA+ILAAM QS ++++ E+A  AEL+D  R
Sbjct: 83  NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAKILAAM-QSVNAKSQERAVLAELEDDTR 141

Query: 525 LLARVVRAHLDTCEF 569
           + A ++RAH+DTC+F
Sbjct: 142 VTAAIIRAHMDTCDF 156



 Score = 67.7 bits (158), Expect = 2e-10
 Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRSIQQKIQYRPCTKNQQCSILRINR
Sbjct: 48  SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 82


>UniRef50_Q9XUK7 Cluster: Nuclear hormone receptor family member
           nhr-85; n=3; Caenorhabditis|Rep: Nuclear hormone
           receptor family member nhr-85 - Caenorhabditis elegans
          Length = 514

 Score = 79.0 bits (186), Expect = 9e-14
 Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 6/98 (6%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQ CRLKKC+AVGMSRDAVRFGRVPKREKAR+   MQ+++     +Q  A + ++   
Sbjct: 164 NRCQCCRLKKCLAVGMSRDAVRFGRVPKREKARMFEEMQKTNVQSQRDQ-IAIQYENLTE 222

Query: 525 LLARV------VRAHLDTCEFHA*SRRFHASQSFVTVP 620
           ++ ++      ++A L+ C     + R   + +F+ +P
Sbjct: 223 VMHKINQAFGTLQATLEKCTGPIYTDRCPITSNFIVIP 260



 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 21/30 (70%), Positives = 24/30 (80%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQKI YR CT+ + C ILR NR
Sbjct: 134 KGFFRRSIQQKITYRACTRAEDCLILRNNR 163


>UniRef50_Q4RW38 Cluster: Chromosome 9 SCAF14991, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 9
           SCAF14991, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 539

 Score = 78.2 bits (184), Expect = 2e-13
 Identities = 35/59 (59%), Positives = 44/59 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521
           NRCQ+CR KKC++VGMSRDAVRFGR+PKREK R+L  MQ   +S    ++A  E+D  P
Sbjct: 100 NRCQHCRFKKCLSVGMSRDAVRFGRIPKREKQRLLEEMQSYMNSL--NESAVMEMDSCP 156



 Score = 50.0 bits (114), Expect = 5e-05
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           QGFFRRSIQQ I Y+ C KN+ C I+R+NR
Sbjct: 70  QGFFRRSIQQNINYKMCVKNENCLIMRMNR 99


>UniRef50_P20393 Cluster: Orphan nuclear receptor NR1D1; n=25;
           Theria|Rep: Orphan nuclear receptor NR1D1 - Homo sapiens
           (Human)
          Length = 614

 Score = 77.4 bits (182), Expect = 3e-13
 Identities = 33/59 (55%), Positives = 45/59 (76%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521
           NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+LA MQ + +   ++ ++   L+ +P
Sbjct: 183 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLETSP 241



 Score = 53.2 bits (122), Expect = 5e-06
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ IQY+ C KN+ CSI+RINR
Sbjct: 153 KGFFRRSIQQNIQYKRCLKNENCSIVRINR 182


>UniRef50_Q6TNS3 Cluster: Nuclear receptor subfamily 1, group D,
           member 1; n=8; Clupeocephala|Rep: Nuclear receptor
           subfamily 1, group D, member 1 - Danio rerio (Zebrafish)
           (Brachydanio rerio)
          Length = 637

 Score = 76.2 bits (179), Expect = 6e-13
 Identities = 32/49 (65%), Positives = 40/49 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+LA MQ + ++  + Q
Sbjct: 179 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQNAMNNMVNNQ 227



 Score = 52.4 bits (120), Expect = 9e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ IQY+ C KN+ C+I+RINR
Sbjct: 149 KGFFRRSIQQNIQYKKCLKNETCTIMRINR 178


>UniRef50_Q4RXZ3 Cluster: Chromosome 11 SCAF14979, whole genome
           shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 11
           SCAF14979, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 720

 Score = 76.2 bits (179), Expect = 6e-13
 Identities = 34/59 (57%), Positives = 46/59 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521
           NRCQ+CR KKC+AVGMSRDAVRFGR+PKREK R+L  MQ   +S    ++A+ +++ +P
Sbjct: 292 NRCQHCRFKKCLAVGMSRDAVRFGRIPKREKQRLLDEMQSYMNSL--NESASVDMEMSP 348



 Score = 54.0 bits (124), Expect = 3e-06
 Identities = 24/40 (60%), Positives = 29/40 (72%)
 Frame = +2

Query: 224 RDSTKCSCDPQGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           R S   S  PQGFFRRSIQQ I Y+ C KN++C I+R+NR
Sbjct: 252 RCSESFSSLPQGFFRRSIQQNIHYKMCVKNEKCLIMRMNR 291


>UniRef50_UPI0000F1EFB0 Cluster: PREDICTED: similar to Rev-Erb beta
           1; n=1; Danio rerio|Rep: PREDICTED: similar to Rev-Erb
           beta 1 - Danio rerio
          Length = 504

 Score = 73.3 bits (172), Expect = 4e-12
 Identities = 32/56 (57%), Positives = 41/56 (73%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
           +T S     +  NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L  MQ + ++
Sbjct: 125 KTESCTIVRINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLLEMQTAMNN 180



 Score = 50.0 bits (114), Expect = 5e-05
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ IQY+ C K + C+I+RINR
Sbjct: 107 KGFFRRSIQQNIQYKKCLKTESCTIVRINR 136


>UniRef50_Q90Z65 Cluster: Rev-Erb beta 1; n=5; Euteleostomi|Rep:
           Rev-Erb beta 1 - Danio rerio (Zebrafish) (Brachydanio
           rerio)
          Length = 404

 Score = 73.3 bits (172), Expect = 4e-12
 Identities = 32/56 (57%), Positives = 41/56 (73%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
           +T S     +  NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L  MQ + ++
Sbjct: 41  KTESCTIVRINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLLEMQTAMNN 96



 Score = 50.0 bits (114), Expect = 5e-05
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ IQY+ C K + C+I+RINR
Sbjct: 23  KGFFRRSIQQNIQYKKCLKTESCTIVRINR 52


>UniRef50_Q1L684 Cluster: Rev-erbgamma-A; n=7; Clupeocephala|Rep:
           Rev-erbgamma-A - Danio rerio (Zebrafish) (Brachydanio
           rerio)
          Length = 462

 Score = 73.3 bits (172), Expect = 4e-12
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
           NRCQ+CR KKC++VGMSRDAVRFGR+PKREK R+L  MQ   +S
Sbjct: 57  NRCQHCRFKKCLSVGMSRDAVRFGRIPKREKQRLLDEMQSYMNS 100



 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ I Y+ C KN+ C I+R+NR
Sbjct: 27  KGFFRRSIQQNINYKMCVKNENCLIMRMNR 56


>UniRef50_Q14995 Cluster: Orphan nuclear receptor NR1D2; n=48;
           Euteleostomi|Rep: Orphan nuclear receptor NR1D2 - Homo
           sapiens (Human)
          Length = 579

 Score = 73.3 bits (172), Expect = 4e-12
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L  MQ +  +  + Q
Sbjct: 154 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ 202



 Score = 52.8 bits (121), Expect = 7e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ IQY+ C KN+ CSI+R+NR
Sbjct: 124 KGFFRRSIQQNIQYKKCLKNENCSIMRMNR 153


>UniRef50_Q90Z63 Cluster: Rev-Erb beta; n=3; Euteleostei|Rep:
           Rev-Erb beta - Oncorhynchus mykiss (Rainbow trout)
           (Salmo gairdneri)
          Length = 461

 Score = 72.1 bits (169), Expect = 1e-11
 Identities = 30/44 (68%), Positives = 37/44 (84%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
           NRCQ CR KKC+AVGMSRD+VRFGR+PKREK R+L  MQ + ++
Sbjct: 28  NRCQQCRFKKCLAVGMSRDSVRFGRIPKREKQRMLLEMQNAMNN 71



 Score = 38.3 bits (85), Expect = 0.15
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +2

Query: 263 FRRSIQQKIQYRPCTKNQQCSILRINR 343
           FRRSIQ   +Y+ C K + C+++RINR
Sbjct: 1   FRRSIQHSTRYKKCLKMENCTVIRINR 27


>UniRef50_UPI00004D0DA7 Cluster: Orphan nuclear receptor NR1D2
           (Rev-erb-beta) (EAR-1R) (Orphan nuclear hormone receptor
           BD73).; n=1; Xenopus tropicalis|Rep: Orphan nuclear
           receptor NR1D2 (Rev-erb-beta) (EAR-1R) (Orphan nuclear
           hormone receptor BD73). - Xenopus tropicalis
          Length = 571

 Score = 68.1 bits (159), Expect = 2e-10
 Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRD--AVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDD 515
           NRCQ CR KKC++VGMSRD  AVRFGR+PKREK R+L  MQ    +    Q + + L +
Sbjct: 168 NRCQQCRFKKCLSVGMSRDATAVRFGRIPKREKQRMLIEMQTVMKTMMSNQFSGSSLQE 226



 Score = 54.0 bits (124), Expect = 3e-06
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ IQY+ C KN+ CSI+RINR
Sbjct: 138 KGFFRRSIQQNIQYKKCLKNESCSIIRINR 167


>UniRef50_A7LC92 Cluster: Nuclear receptor; n=2; Onchocercidae|Rep:
           Nuclear receptor - Brugia malayi (Filarial nematode
           worm)
          Length = 656

 Score = 68.1 bits (159), Expect = 2e-10
 Identities = 33/73 (45%), Positives = 46/73 (63%)
 Frame = +3

Query: 300 PARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSR 479
           P  R+   + +    NRCQ+CRL+KCI VGMSR+AVRFGRVPK EK R+   + +  ++R
Sbjct: 209 PCTRSQQCIVARNNRNRCQHCRLQKCIRVGMSREAVRFGRVPKHEKVRMAEELAR-VTAR 267

Query: 480 AHEQAAAAELDDA 518
               A  + L D+
Sbjct: 268 TLTDAVQSALTDS 280



 Score = 56.0 bits (129), Expect = 7e-07
 Identities = 23/30 (76%), Positives = 27/30 (90%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQKIQYRPCT++QQC + R NR
Sbjct: 194 KGFFRRSIQQKIQYRPCTRSQQCIVARNNR 223


>UniRef50_UPI0000588E36 Cluster: PREDICTED: similar to peroxisome
           proliferator activated receptor; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to peroxisome
           proliferator activated receptor - Strongylocentrotus
           purpuratus
          Length = 378

 Score = 66.1 bits (154), Expect = 7e-10
 Identities = 29/74 (39%), Positives = 43/74 (58%)
 Frame = +3

Query: 288 YNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS 467
           Y   P  +T     +  T N+CQYCR +KC+ VGMS DA RFGR+P+ E+ R+L  ++  
Sbjct: 58  YKPCPFVKTEPCKINIATRNKCQYCRFQKCMQVGMSHDASRFGRMPREERLRLLEELKDE 117

Query: 468 SSSRAHEQAAAAEL 509
            +    E+   AE+
Sbjct: 118 ETEATEEEKHRAEI 131


>UniRef50_Q4H2X6 Cluster: Nuclear receptor; n=3; Ciona
           intestinalis|Rep: Nuclear receptor - Ciona intestinalis
           (Transparent sea squirt)
          Length = 644

 Score = 64.5 bits (150), Expect = 2e-09
 Identities = 23/43 (53%), Positives = 36/43 (83%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473
           N+CQ+CR KKC+ +GMSRDA+RFGR+P+ EK +I+  +++ S+
Sbjct: 98  NKCQFCRFKKCVGLGMSRDAIRFGRMPRHEKQQIIQEIEKKSN 140


>UniRef50_UPI0000D55BCD Cluster: PREDICTED: similar to CG18023-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG18023-PA, isoform A - Tribolium castaneum
          Length = 363

 Score = 64.1 bits (149), Expect = 3e-09
 Identities = 29/74 (39%), Positives = 45/74 (60%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRL 527
           RCQYCR KKC++VGMSRD+VR+GRVPKR + R      + +++ A +  +  +      +
Sbjct: 51  RCQYCRFKKCLSVGMSRDSVRYGRVPKRSRERSTEESSRVTTTDADQSDSETKQLAVYDV 110

Query: 528 LARVVRAHLDTCEF 569
           +  V +AH   C +
Sbjct: 111 ILTVSQAHHANCGY 124


>UniRef50_P45447 Cluster: Ecdysone-induced protein 78C; n=5;
           Diptera|Rep: Ecdysone-induced protein 78C - Drosophila
           melanogaster (Fruit fly)
          Length = 866

 Score = 63.7 bits (148), Expect = 3e-09
 Identities = 32/61 (52%), Positives = 41/61 (67%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDD 515
           L  NRCQYCR KKC++ GMSRD+VR+GRVPKR +    AA    +SS A    A+  +DD
Sbjct: 414 LNRNRCQYCRFKKCLSAGMSRDSVRYGRVPKRSRELNGAA----ASSAAAGAPASLNVDD 469

Query: 516 A 518
           +
Sbjct: 470 S 470



 Score = 41.5 bits (93), Expect = 0.016
 Identities = 18/35 (51%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRSIQ++I+YR C ++ +C ++R+NR
Sbjct: 383 SCEGCKGFFRRSIQKQIEYR-CLRDGKCLVIRLNR 416


>UniRef50_A7MAD3 Cluster: Ecdysone-induced protein 78C; n=3;
           Endopterygota|Rep: Ecdysone-induced protein 78C - Aedes
           aegypti (Yellowfever mosquito)
          Length = 431

 Score = 63.3 bits (147), Expect = 5e-09
 Identities = 25/34 (73%), Positives = 30/34 (88%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           L  NRCQYCR KKC+AVGMSRD+VR+GRVPK+ +
Sbjct: 73  LNRNRCQYCRFKKCLAVGMSRDSVRYGRVPKKSR 106



 Score = 41.5 bits (93), Expect = 0.016
 Identities = 18/35 (51%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRSIQ++I+YR C ++ +C ++R+NR
Sbjct: 42  SCEGCKGFFRRSIQKQIEYR-CLRDGKCLVIRLNR 75


>UniRef50_Q4H2V7 Cluster: Nuclear receptor; n=1; Ciona
           intestinalis|Rep: Nuclear receptor - Ciona intestinalis
           (Transparent sea squirt)
          Length = 597

 Score = 62.9 bits (146), Expect = 6e-09
 Identities = 27/56 (48%), Positives = 40/56 (71%)
 Frame = +3

Query: 285 RYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
           +Y +    RT S+    +  NRCQ CR  KC+ VGMS+DAV++GR+PK++KAR++A
Sbjct: 80  KYRSCILDRTCSITK--INRNRCQTCRFMKCLYVGMSKDAVKYGRIPKKQKARLIA 133



 Score = 45.2 bits (102), Expect = 0.001
 Identities = 20/35 (57%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRR+I QKI+YR C  ++ CSI +INR
Sbjct: 63  SCEGCKGFFRRTIHQKIKYRSCILDRTCSITKINR 97


>UniRef50_P51449 Cluster: Nuclear receptor ROR-gamma; n=34;
           Amniota|Rep: Nuclear receptor ROR-gamma - Homo sapiens
           (Human)
          Length = 518

 Score = 62.9 bits (146), Expect = 6e-09
 Identities = 25/49 (51%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +Q+    R  +Q
Sbjct: 81  NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 129


>UniRef50_P35398 Cluster: Nuclear receptor ROR-alpha; n=84;
           Euteleostomi|Rep: Nuclear receptor ROR-alpha - Homo
           sapiens (Human)
          Length = 556

 Score = 62.5 bits (145), Expect = 8e-09
 Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
           NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++  + A +Q+       R H+Q
Sbjct: 156 NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 207


>UniRef50_Q2LYQ2 Cluster: GA14768-PA; n=1; Drosophila
           pseudoobscura|Rep: GA14768-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 729

 Score = 62.1 bits (144), Expect = 1e-08
 Identities = 30/62 (48%), Positives = 38/62 (61%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDD 515
           L  NRCQYCR KKC++ GMSRD+VR+GRVPKR +  +  A   +  S A   +    L  
Sbjct: 323 LNRNRCQYCRFKKCLSAGMSRDSVRYGRVPKRSR-ELNGAGSTAGGSGATSTSGCPLLAG 381

Query: 516 AP 521
           AP
Sbjct: 382 AP 383



 Score = 41.5 bits (93), Expect = 0.016
 Identities = 18/35 (51%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRSIQ++I+YR C ++ +C ++R+NR
Sbjct: 292 SCEGCKGFFRRSIQKQIEYR-CLRDGKCLVIRLNR 325


>UniRef50_P41828 Cluster: Nuclear hormone receptor family member
           nhr-23; n=7; Caenorhabditis|Rep: Nuclear hormone
           receptor family member nhr-23 - Caenorhabditis elegans
          Length = 588

 Score = 62.1 bits (144), Expect = 1e-08
 Identities = 25/46 (54%), Positives = 35/46 (76%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
           R  + V   +  NRCQYCRLKKCI +GMSRDAV+FGR+ K+++ ++
Sbjct: 201 RQKNCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGRMSKKQREKV 246


>UniRef50_Q4RV24 Cluster: Chromosome 15 SCAF14992, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 15 SCAF14992, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 547

 Score = 61.7 bits (143), Expect = 1e-08
 Identities = 24/45 (53%), Positives = 37/45 (82%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSR 479
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +Q+   S+
Sbjct: 58  NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKSQ 102


>UniRef50_A1DYE6 Cluster: Nuclear receptor-like protein; n=1;
           Trichinella spiralis|Rep: Nuclear receptor-like protein
           - Trichinella spiralis (Trichina worm)
          Length = 358

 Score = 61.7 bits (143), Expect = 1e-08
 Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRD-----AVRFGRVPKREKARILAAMQQSSSSRAHEQAAA 500
           L  NRCQYCR KKC+AVGMSRD     AVR+GRVPKR + R+   ++ +S +   E    
Sbjct: 176 LNRNRCQYCRFKKCLAVGMSRDFAFFSAVRYGRVPKRSRDRMQEDVRVTSMTGESEVDNE 235

Query: 501 AELDDAP--RLLARVVRAHLDTCEF 569
            E        ++  V +AH   C +
Sbjct: 236 VEKHQLALYDIILSVSQAHHSNCNY 260



 Score = 40.3 bits (90), Expect = 0.037
 Identities = 18/35 (51%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRSIQ++I+YR C ++ +C + R+NR
Sbjct: 145 SCEGCKGFFRRSIQKQIEYR-CLRDGKCLVYRLNR 178


>UniRef50_P37231 Cluster: Peroxisome proliferator-activated receptor
           gamma; n=97; Craniata|Rep: Peroxisome
           proliferator-activated receptor gamma - Homo sapiens
           (Human)
          Length = 505

 Score = 61.7 bits (143), Expect = 1e-08
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA +         E A
Sbjct: 188 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 237


>UniRef50_UPI0000F21513 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 433

 Score = 61.3 bits (142), Expect = 2e-08
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQ CRLKKC+A GMSRDAV+FGR+ KR++  + A +++    R H++  A  + +   
Sbjct: 61  NRCQSCRLKKCVAQGMSRDAVKFGRMSKRQRDSLFAEVER---HRQHQRLQANSVQEPQP 117

Query: 525 LLA 533
           L A
Sbjct: 118 LQA 120


>UniRef50_Q1L678 Cluster: RORgamma-B; n=13; Euteleostomi|Rep:
           RORgamma-B - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 480

 Score = 61.3 bits (142), Expect = 2e-08
 Identities = 24/40 (60%), Positives = 35/40 (87%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ 464
           NRCQ+CRL+KC+A+GMSRDAVRFGR+ K+++  + A +Q+
Sbjct: 60  NRCQHCRLQKCLALGMSRDAVRFGRMSKKQRDSLYAEVQR 99


>UniRef50_UPI0000F2CB6C Cluster: PREDICTED: similar to
           beta-1,4-N-acetyl-galactosaminyl transferase 1,; n=1;
           Monodelphis domestica|Rep: PREDICTED: similar to
           beta-1,4-N-acetyl-galactosaminyl transferase 1, -
           Monodelphis domestica
          Length = 557

 Score = 60.9 bits (141), Expect = 2e-08
 Identities = 24/50 (48%), Positives = 39/50 (78%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +Q+   ++   Q+
Sbjct: 149 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQRHQQNQEAGQS 198


>UniRef50_P31396 Cluster: Probable nuclear hormone receptor HR3;
           n=21; Protostomia|Rep: Probable nuclear hormone receptor
           HR3 - Drosophila melanogaster (Fruit fly)
          Length = 487

 Score = 60.9 bits (141), Expect = 2e-08
 Identities = 29/71 (40%), Positives = 41/71 (57%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R    V   +  NRCQYCRL+KC+ +GMSRDAV+FGR+ K+++ ++          R H 
Sbjct: 89  RNKQCVVDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKKQREKV------EDEVRFHR 142

Query: 489 QAAAAELDDAP 521
               A+ D AP
Sbjct: 143 AQMRAQSDAAP 153



 Score = 34.3 bits (75), Expect = 2.4
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRS    + Y+ C +N+QC + R+NR
Sbjct: 72  KGFFRRSQSSVVNYQ-CPRNKQCVVDRVNR 100


>UniRef50_UPI0000584695 Cluster: PREDICTED: similar to
           ecdysone-induced protein 75b; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to ecdysone-induced
           protein 75b - Strongylocentrotus purpuratus
          Length = 356

 Score = 60.5 bits (140), Expect = 3e-08
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCRLKKC+AVGMS+DAVR GR PK+ K
Sbjct: 64  NRCQYCRLKKCLAVGMSKDAVRLGRCPKKCK 94



 Score = 46.8 bits (106), Expect = 4e-04
 Identities = 18/30 (60%), Positives = 24/30 (80%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ  ++YR C+K  +C I+RINR
Sbjct: 34  KGFFRRSIQHNVKYRVCSKGDECLIMRINR 63


>UniRef50_Q90Z66 Cluster: Peroxisome proliferator-activated receptor
           beta 2; n=21; Clupeocephala|Rep: Peroxisome
           proliferator-activated receptor beta 2 - Danio rerio
           (Zebrafish) (Brachydanio rerio)
          Length = 368

 Score = 60.5 bits (140), Expect = 3e-08
 Identities = 21/38 (55%), Positives = 33/38 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM 458
           N+CQYCR +KC+A+GMS DA+R+GR+P+ EK +++A +
Sbjct: 52  NKCQYCRFQKCLALGMSHDAIRYGRMPEAEKKKLVAGL 89


>UniRef50_Q0KFU8 Cluster: HR3 isoform B1; n=3; Blattella
           germanica|Rep: HR3 isoform B1 - Blattella germanica
           (German cockroach)
          Length = 651

 Score = 60.5 bits (140), Expect = 3e-08
 Identities = 28/71 (39%), Positives = 42/71 (59%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R  + V   +  NRCQYCRL+KC+ +GMSRDAV+FGR+ K+++ ++          R H 
Sbjct: 120 RNKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKV------EDEVRFHR 173

Query: 489 QAAAAELDDAP 521
               A+ + AP
Sbjct: 174 AQLRAQTETAP 184



 Score = 32.3 bits (70), Expect = 9.9
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRS    + Y+ C +N+ C + R+NR
Sbjct: 103 KGFFRRSQSSVVNYQ-CPRNKNCVVDRVNR 131


>UniRef50_Q967S3 Cluster: Nuclear receptor nhr-7A; n=4;
           Onchocercidae|Rep: Nuclear receptor nhr-7A - Dirofilaria
           immitis (Canine heartworm)
          Length = 556

 Score = 60.1 bits (139), Expect = 4e-08
 Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKR---EKARILAAMQQSSSSRAHEQAAAAE 506
           L  NRCQ+CR +KC+AVGMSRD+VR+GR P+R   E         + +S   H + A   
Sbjct: 210 LNRNRCQFCRFRKCLAVGMSRDSVRYGRTPRRKGDETDNENVPSWEETSKFTHYEIADIA 269

Query: 507 LDDAPRLLARVVRAHLDTCEF 569
                  +  V  AH   C +
Sbjct: 270 NSRLRNFIESVAEAHTTCCSY 290



 Score = 38.3 bits (85), Expect = 0.15
 Identities = 16/30 (53%), Positives = 25/30 (83%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ++++YR C ++ +C I R+NR
Sbjct: 184 KGFFRRSIQKQMEYR-CLRDGKCHIHRLNR 212


>UniRef50_UPI0000E481C8 Cluster: PREDICTED: similar to nuclear
           hormone receptor E75; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to nuclear hormone
           receptor E75 - Strongylocentrotus purpuratus
          Length = 742

 Score = 59.3 bits (137), Expect = 8e-08
 Identities = 24/43 (55%), Positives = 35/43 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473
           N+CQ CRL+KCI +GMS++AVRFGR+ KREK ++   M++ S+
Sbjct: 103 NQCQSCRLRKCILMGMSKNAVRFGRMSKREKMKLTQVMKEISN 145



 Score = 39.9 bits (89), Expect = 0.049
 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRR++Q  + YRPC    +C I R NR
Sbjct: 68  SCEGCKGFFRRTVQHNLTYRPCPNGGKCVIQRKNR 102


>UniRef50_Q9BWQ7 Cluster: Peroxisome proliferator-activated receptor
           alpha; n=15; Euteleostomi|Rep: Peroxisome
           proliferator-activated receptor alpha - Homo sapiens
           (Human)
          Length = 258

 Score = 59.3 bits (137), Expect = 8e-08
 Identities = 22/36 (61%), Positives = 31/36 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
           N+CQYCR  KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186


>UniRef50_Q07869 Cluster: Peroxisome proliferator-activated receptor
           alpha; n=113; Gnathostomata|Rep: Peroxisome
           proliferator-activated receptor alpha - Homo sapiens
           (Human)
          Length = 468

 Score = 59.3 bits (137), Expect = 8e-08
 Identities = 22/36 (61%), Positives = 31/36 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
           N+CQYCR  KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186


>UniRef50_UPI0000EB467C Cluster: UPI0000EB467C related cluster; n=1;
           Canis lupus familiaris|Rep: UPI0000EB467C UniRef100
           entry - Canis familiaris
          Length = 501

 Score = 58.4 bits (135), Expect = 1e-07
 Identities = 22/40 (55%), Positives = 35/40 (87%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ 464
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +++
Sbjct: 59  NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVKK 98


>UniRef50_Q90Y02 Cluster: Peroxisome proliferator-activated
           receptor; n=1; Petromyzon marinus|Rep: Peroxisome
           proliferator-activated receptor - Petromyzon marinus
           (Sea lamprey)
          Length = 436

 Score = 58.4 bits (135), Expect = 1e-07
 Identities = 21/36 (58%), Positives = 31/36 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
           N+CQ+CR +KC+ VGMS +A+RFGR+P+ EK R++A
Sbjct: 13  NKCQHCRFQKCLGVGMSHEAIRFGRMPQAEKKRLIA 48


>UniRef50_Q4RVW1 Cluster: Chromosome 9 SCAF14991, whole genome
           shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 9
           SCAF14991, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 463

 Score = 58.4 bits (135), Expect = 1e-07
 Identities = 20/43 (46%), Positives = 34/43 (79%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473
           N+CQYCR +KC+++GMS DA+R+GR+P+ E+ +++A +    S
Sbjct: 79  NKCQYCRFQKCLSLGMSHDAIRYGRMPEAERKKLVAGLLAEES 121


>UniRef50_Q4H2V2 Cluster: Nuclear receptor; n=2; Ciona
           intestinalis|Rep: Nuclear receptor - Ciona intestinalis
           (Transparent sea squirt)
          Length = 802

 Score = 58.4 bits (135), Expect = 1e-07
 Identities = 23/54 (42%), Positives = 37/54 (68%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAE 506
           NRCQ+CRL+KC+  GMS+DAV+FGR+ K+++ R+   + +    RA +    +E
Sbjct: 215 NRCQHCRLQKCLRAGMSKDAVKFGRMSKKQRDRLYLEVLKQQQMRAGQPQVESE 268


>UniRef50_O02643 Cluster: Hormone receptor 3C; n=1; Choristoneura
           fumiferana|Rep: Hormone receptor 3C - Choristoneura
           fumiferana (Spruce budworm)
          Length = 651

 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 22/46 (47%), Positives = 34/46 (73%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
           R  + V   +  NRCQYCRL+KC+ +GM RDAV+FGR+ K+++ ++
Sbjct: 72  RNKACVVDRVNRNRCQYCRLQKCLKLGMRRDAVKFGRMSKKQREKV 117


>UniRef50_Q2TUU3 Cluster: Ecdysone-induced protein E78; n=3;
           Schistosoma|Rep: Ecdysone-induced protein E78 -
           Schistosoma mansoni (Blood fluke)
          Length = 591

 Score = 57.6 bits (133), Expect = 2e-07
 Identities = 21/34 (61%), Positives = 29/34 (85%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           L  NRCQYCR +KC+A GMS+D+VR+GR+P+R +
Sbjct: 336 LNRNRCQYCRFRKCLAAGMSKDSVRYGRMPRRTR 369



 Score = 40.3 bits (90), Expect = 0.037
 Identities = 17/35 (48%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRSIQ++I+Y+ C ++ +C ++R+NR
Sbjct: 305 SCEGCKGFFRRSIQKQIEYK-CLRDGKCLVIRLNR 338


>UniRef50_Q4SHA3 Cluster: Chromosome 19 SCAF14584, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 19 SCAF14584, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 500

 Score = 56.8 bits (131), Expect = 4e-07
 Identities = 21/36 (58%), Positives = 30/36 (83%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
           N+CQYCR  KC++VGMS +A+RFGR+P+ EK ++ A
Sbjct: 139 NKCQYCRFHKCLSVGMSHNAIRFGRMPQAEKLKLKA 174


>UniRef50_UPI0000E494CA Cluster: PREDICTED: similar to peroxisome
           proliferator-activated receptor alpha; n=1;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           peroxisome proliferator-activated receptor alpha -
           Strongylocentrotus purpuratus
          Length = 504

 Score = 53.6 bits (123), Expect = 4e-06
 Identities = 24/51 (47%), Positives = 34/51 (66%)
 Frame = +3

Query: 321 VVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473
           +V+ G T N+CQYCR +KCI +GMS  AVR GRVPK E  ++   + +  +
Sbjct: 155 IVNIG-TRNKCQYCRYQKCIILGMSSTAVRMGRVPKVEVLKLKTELDEKDN 204


>UniRef50_Q4SGI2 Cluster: Chromosome undetermined SCAF14594, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF14594, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 588

 Score = 52.8 bits (121), Expect = 7e-06
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = +2

Query: 227 DSTKCSCDPQGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           D +  S   QGFFRRSIQQ IQY+ C K++ C+I+RINR
Sbjct: 18  DLSPSSRRQQGFFRRSIQQNIQYKKCLKSESCAIMRINR 56


>UniRef50_UPI0000586F42 Cluster: PREDICTED: similar to GA17350-PA;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to GA17350-PA - Strongylocentrotus purpuratus
          Length = 573

 Score = 52.4 bits (120), Expect = 9e-06
 Identities = 25/52 (48%), Positives = 33/52 (63%)
 Frame = +3

Query: 312 TSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS 467
           T   V +  T NRC YCR KKC+AVGMS+ A + GR  K+ KA+I   + +S
Sbjct: 148 TKQCVINKETRNRCMYCRWKKCVAVGMSKTASKLGRRSKQLKAQIAKHLPKS 199


>UniRef50_UPI00005864C9 Cluster: PREDICTED: similar to E75 nuclear
           receptor; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to E75 nuclear receptor -
           Strongylocentrotus purpuratus
          Length = 393

 Score = 52.4 bits (120), Expect = 9e-06
 Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
 Frame = +3

Query: 339 TGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDA 518
           T  RC +CR +KC+AVGMS  +VR GR  K++K + LA +Q   S    EQ    E  D 
Sbjct: 66  TRGRCAHCRYQKCLAVGMSVHSVRVGRYSKKQKMKNLAEIQ---SLATPEQIVERERKDR 122

Query: 519 P--RLLARVVRAH 551
               L+ +VV AH
Sbjct: 123 EIYALIQKVVNAH 135


>UniRef50_Q66MI8 Cluster: COUP-TF1 nuclear orphan receptor; n=2;
           Hydra vulgaris|Rep: COUP-TF1 nuclear orphan receptor -
           Hydra attenuata (Hydra) (Hydra vulgaris)
          Length = 453

 Score = 52.0 bits (119), Expect = 1e-05
 Identities = 20/28 (71%), Positives = 25/28 (89%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK 428
           N+CQYCRLKKC+ VGM +DAV+ GR+PK
Sbjct: 32  NQCQYCRLKKCVKVGMRKDAVQKGRLPK 59


>UniRef50_UPI0000E4819E Cluster: PREDICTED: similar to Nr1h3
           protein; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to Nr1h3 protein - Strongylocentrotus
           purpuratus
          Length = 480

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRC  CR KKC+ +GMS+DAVR GR+P ++K
Sbjct: 74  NRCPACRYKKCLELGMSKDAVRIGRIPNKQK 104


>UniRef50_Q1W404 Cluster: RAR-like nuclear receptor; n=5;
           Schistosoma|Rep: RAR-like nuclear receptor - Schistosoma
           mansoni (Blood fluke)
          Length = 715

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 27/71 (38%), Positives = 41/71 (57%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           N+CQ CRL KCIAVGMSRDAVR  R  K+ +     ++   SS  +++   +A    +  
Sbjct: 317 NKCQQCRLLKCIAVGMSRDAVRKRRQGKKREQSSCESVTLPSSDSSNKYEGSAYSSCSAD 376

Query: 525 LLARVVRAHLD 557
           ++    +AHL+
Sbjct: 377 VVLTPSKAHLN 387


>UniRef50_P13631 Cluster: Retinoic acid receptor gamma-1; n=5;
           Coelomata|Rep: Retinoic acid receptor gamma-1 - Homo
           sapiens (Human)
          Length = 454

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 29/84 (34%), Positives = 49/84 (58%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R  + + + +T NRCQYCRL+KC  VGMS++AVR  R  K+++      +++  S  ++E
Sbjct: 128 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKE------VKEEGSPDSYE 181

Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
            +   E      L+ +V +AH +T
Sbjct: 182 LSPQLE-----ELITKVSKAHQET 200


>UniRef50_Q4REU2 Cluster: Chromosome 13 SCAF15122, whole genome
           shotgun sequence; n=5; Tetraodontidae|Rep: Chromosome 13
           SCAF15122, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 746

 Score = 50.4 bits (115), Expect = 3e-05
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           N+CQYCRLKKC+ VGM R+AV+ GRVP
Sbjct: 51  NQCQYCRLKKCLKVGMRREAVQRGRVP 77



 Score = 42.3 bits (95), Expect = 0.009
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAV 407
           N+CQYCRLKKC+ VGM R+AV
Sbjct: 467 NQCQYCRLKKCLKVGMRREAV 487


>UniRef50_P10589 Cluster: COUP transcription factor 1; n=130;
           Eumetazoa|Rep: COUP transcription factor 1 - Homo
           sapiens (Human)
          Length = 423

 Score = 49.2 bits (112), Expect = 8e-05
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           N+CQYCRLKKC+ VGM R+AV+ GR+P
Sbjct: 136 NQCQYCRLKKCLKVGMRREAVQRGRMP 162


>UniRef50_P16376 Cluster: Steroid receptor seven-up, isoform A; n=1;
           Drosophila melanogaster|Rep: Steroid receptor seven-up,
           isoform A - Drosophila melanogaster (Fruit fly)
          Length = 746

 Score = 49.2 bits (112), Expect = 8e-05
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           N+CQYCRLKKC+ +GM R+AV+ GRVP
Sbjct: 250 NQCQYCRLKKCLKMGMRREAVQRGRVP 276


>UniRef50_Q611B9 Cluster: Putative uncharacterized protein CBG17178;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG17178 - Caenorhabditis
           briggsae
          Length = 538

 Score = 48.8 bits (111), Expect = 1e-04
 Identities = 29/75 (38%), Positives = 36/75 (48%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQYCR KKC+  GMS+D+V   R  KR K          +S R        E DD   
Sbjct: 209 NRCQYCRFKKCLDAGMSKDSV---RQTKRNK--------PPTSDRTVSSTVNVEPDDHII 257

Query: 525 LLARVVRAHLDTCEF 569
              R++  HL TC +
Sbjct: 258 CADRIIDLHLKTCNY 272



 Score = 40.3 bits (90), Expect = 0.037
 Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCAIRS 418
           SC+  +GFFRRSIQ+KI YR C K Q C I R +R        +K       +      S
Sbjct: 175 SCEGCKGFFRRSIQRKIDYR-CLKQQFCEIRRDSRNRCQYCRFKKCLDAGMSK-----DS 228

Query: 419 CTQTRESAYPRSDATV 466
             QT+ +  P SD TV
Sbjct: 229 VRQTKRNKPPTSDRTV 244


>UniRef50_A7S1X4 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 391

 Score = 48.8 bits (111), Expect = 1e-04
 Identities = 18/27 (66%), Positives = 24/27 (88%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           N+CQYCRLKKC+ VGM ++AV+ GR+P
Sbjct: 82  NQCQYCRLKKCLKVGMRKEAVQKGRIP 108


>UniRef50_P10276 Cluster: Retinoic acid receptor alpha; n=207;
           Eumetazoa|Rep: Retinoic acid receptor alpha - Homo
           sapiens (Human)
          Length = 462

 Score = 48.8 bits (111), Expect = 1e-04
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           R  + + + +T NRCQYCRL+KC  VGMS+++VR  R  K+++
Sbjct: 126 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 168


>UniRef50_UPI0000F2CA65 Cluster: PREDICTED: similar to DNA
           (cytosine-5-)-methyltransferase 3 alpha,; n=2;
           Theria|Rep: PREDICTED: similar to DNA
           (cytosine-5-)-methyltransferase 3 alpha, - Monodelphis
           domestica
          Length = 732

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           N+CQYCRLKKC  VGM ++AV+ GR+P
Sbjct: 444 NQCQYCRLKKCFRVGMRKEAVQRGRIP 470


>UniRef50_Q26641 Cluster: COUP transcription factor; n=2;
           Strongylocentrotus purpuratus|Rep: COUP transcription
           factor - Strongylocentrotus purpuratus (Purple sea
           urchin)
          Length = 381

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 18/27 (66%), Positives = 24/27 (88%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           N+CQYCRLKKC+ +GM R+AV+ GR+P
Sbjct: 191 NQCQYCRLKKCLKMGMRREAVQRGRMP 217


>UniRef50_UPI0000EB22C7 Cluster: UPI0000EB22C7 related cluster; n=1;
           Canis lupus familiaris|Rep: UPI0000EB22C7 UniRef100
           entry - Canis familiaris
          Length = 476

 Score = 47.2 bits (107), Expect = 3e-04
 Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +3

Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP-KREKARILAAMQQSSSSR 479
           S  V   +T N+CQ CR KKCIAVGM+ D  R  RVP K  +  +L  +    S R
Sbjct: 43  SCCVIDKITRNQCQLCRFKKCIAVGMAMDLNRLWRVPCKGHRVSLLLIVVLDDSKR 98


>UniRef50_Q173C6 Cluster: Expressed protein; n=1; Aedes aegypti|Rep:
           Expressed protein - Aedes aegypti (Yellowfever mosquito)
          Length = 594

 Score = 47.2 bits (107), Expect = 3e-04
 Identities = 22/53 (41%), Positives = 32/53 (60%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503
           N+CQ CRLKKC+ +GM++DAV+  R P+        A++     RA  +AA A
Sbjct: 178 NQCQACRLKKCLNMGMNKDAVQNERQPRNTATIRPEALRDMEQGRALREAAVA 230


>UniRef50_Q8I748 Cluster: Retinoid X receptor; n=1; Suberites
           domuncula|Rep: Retinoid X receptor - Suberites domuncula
           (Sponge)
          Length = 548

 Score = 46.8 bits (106), Expect = 4e-04
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = +3

Query: 339 TGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           T NRCQYCRL+KCIA GM ++AV+  R P+  K
Sbjct: 203 TRNRCQYCRLQKCIANGMRKEAVQEERTPQGAK 235


>UniRef50_Q52ZN9 Cluster: Nuclear receptor usp/RXR; n=2;
           Coelomata|Rep: Nuclear receptor usp/RXR - Polistes
           fuscatus (Paper wasp)
          Length = 279

 Score = 46.4 bits (105), Expect = 6e-04
 Identities = 24/59 (40%), Positives = 35/59 (59%)
 Frame = +3

Query: 306 RRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRA 482
           R   S +      NRCQYCR +KC+A+GM R+AV+  R  +R K R  + ++ +SS  A
Sbjct: 12  REEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEER--QRTKERDQSEVESTSSLHA 68


>UniRef50_A1ZA01 Cluster: CG16801-PB, isoform B; n=5;
           Endopterygota|Rep: CG16801-PB, isoform B - Drosophila
           melanogaster (Fruit fly)
          Length = 744

 Score = 46.4 bits (105), Expect = 6e-04
 Identities = 21/53 (39%), Positives = 32/53 (60%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503
           N+CQ CRLKKC+ +GM++DAV+  R P+         +++    RA  +AA A
Sbjct: 328 NQCQACRLKKCLQMGMNKDAVQNERQPRNTATIRPETLREMEHGRALREAAVA 380


>UniRef50_Q4H2W2 Cluster: Nuclear receptor; n=4; Ascidiacea|Rep:
           Nuclear receptor - Ciona intestinalis (Transparent sea
           squirt)
          Length = 638

 Score = 46.0 bits (104), Expect = 7e-04
 Identities = 27/74 (36%), Positives = 42/74 (56%)
 Frame = +3

Query: 339 TGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDA 518
           T +RCQYCRL+KCI  GM R++VR  R  KR K +      +S  +   E + + E++  
Sbjct: 346 TRSRCQYCRLQKCIQAGMLRESVRNDRNKKRGKEK----EGKSDQNGVDEPSCSPEIE-- 399

Query: 519 PRLLARVVRAHLDT 560
             L+  V + H++T
Sbjct: 400 -ALVTSVHKFHVET 412



 Score = 35.9 bits (79), Expect = 0.80
 Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRS+Q+ +QY  C +N+QC I +  R
Sbjct: 314 SCEGCKGFFRRSVQKNMQY-TCHRNKQCLINKSTR 347


>UniRef50_Q4H2U9 Cluster: Nuclear receptor; n=9; Coelomata|Rep:
           Nuclear receptor - Ciona intestinalis (Transparent sea
           squirt)
          Length = 507

 Score = 46.0 bits (104), Expect = 7e-04
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = +3

Query: 282 RRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           R+Y T   R     +      NRCQYCR +KCI +GM ++AV+  R   RE+
Sbjct: 198 RKYLTYTCRDDKDCIIDKRQRNRCQYCRYQKCITMGMKKEAVQEERQKNREQ 249


>UniRef50_Q9Y5X4 Cluster: Photoreceptor-specific nuclear receptor;
           n=33; Euteleostomi|Rep: Photoreceptor-specific nuclear
           receptor - Homo sapiens (Human)
          Length = 410

 Score = 46.0 bits (104), Expect = 7e-04
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
           N+CQ CRLKKC+  GM++DAV+  R P+      L +M+ ++ SR     A
Sbjct: 98  NQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVHLDSMESNTESRPESLVA 148


>UniRef50_Q24142 Cluster: Nuclear hormone receptor HR78; n=4;
           Sophophora|Rep: Nuclear hormone receptor HR78 -
           Drosophila melanogaster (Fruit fly)
          Length = 601

 Score = 46.0 bits (104), Expect = 7e-04
 Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP-KREKARILAAMQQSSSS 476
           NRCQ+CRL+KC+A GM  D+V+  R P    K  I+AA   SS+S
Sbjct: 102 NRCQFCRLQKCLASGMRSDSVQHERKPIVDRKEGIIAAAGSSSTS 146


>UniRef50_UPI0000D8B087 Cluster: UPI0000D8B087 related cluster; n=1;
           Mus musculus|Rep: UPI0000D8B087 UniRef100 entry - Mus
           musculus
          Length = 345

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 23/55 (41%), Positives = 32/55 (58%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAEL 509
           N+CQ C LKKC+  GM++DAV+  R P+      L AM+  S SR+    A+  L
Sbjct: 69  NQCQACWLKKCLQAGMNQDAVQNERQPRSMAQVHLDAMETGSDSRSEPVVASPAL 123


>UniRef50_P13056 Cluster: Orphan nuclear receptor TR2; n=78;
           Euteleostomi|Rep: Orphan nuclear receptor TR2 - Homo
           sapiens (Human)
          Length = 483

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
           NRCQYCRL++CIA GM +D+V+  R P    REK+   AA
Sbjct: 163 NRCQYCRLQRCIAFGMKQDSVQCERKPIEVSREKSSNCAA 202


>UniRef50_UPI000065F8EB Cluster: Homolog of Gallus gallus "Nuclear
           orphan receptor ROR-beta.; n=1; Takifugu rubripes|Rep:
           Homolog of Gallus gallus "Nuclear orphan receptor
           ROR-beta. - Takifugu rubripes
          Length = 583

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 20/40 (50%), Positives = 27/40 (67%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ 464
           NRCQ+CRL+KC+A+GMSRD  R  RV      +I  A ++
Sbjct: 59  NRCQHCRLQKCLALGMSRDERRGTRVLSMRDRKIQQAFKE 98


>UniRef50_O77230 Cluster: Nuclear hormone receptor; n=1; Brugia
           pahangi|Rep: Nuclear hormone receptor - Brugia pahangi
           (Filarial nematode worm)
          Length = 265

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 17/29 (58%), Positives = 23/29 (79%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431
           +RCQYCR +KCIAVGM ++ VR+G +  R
Sbjct: 79  SRCQYCRFQKCIAVGMVKEVVRYGSLSGR 107



 Score = 33.1 bits (72), Expect = 5.7
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSI 328
           +GFF+R++Q+K QY  CT N+ C+I
Sbjct: 50  KGFFKRTVQKKAQY-VCTGNKNCTI 73


>UniRef50_UPI0000DB6D60 Cluster: PREDICTED: similar to Orphan
           nuclear receptor TR4 (Orphan nuclear receptor TAK1);
           n=2; Apocrita|Rep: PREDICTED: similar to Orphan nuclear
           receptor TR4 (Orphan nuclear receptor TAK1) - Apis
           mellifera
          Length = 546

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           NRCQYCRL+KC+A+GM  D+V+  R P
Sbjct: 201 NRCQYCRLQKCLAMGMRSDSVQHERKP 227


>UniRef50_UPI00006A05FD Cluster: Orphan nuclear receptor TR4 (Orphan
           nuclear receptor TAK1).; n=1; Xenopus tropicalis|Rep:
           Orphan nuclear receptor TR4 (Orphan nuclear receptor
           TAK1). - Xenopus tropicalis
          Length = 582

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
 Frame = +3

Query: 282 RRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILA 452
           R+  T   R +   V +    NRCQ+CRLKKC+ +GM  ++V+  R P   +REKA   A
Sbjct: 152 RKSLTYSCRSSQDCVINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDIQREKASNCA 211

Query: 453 A 455
           A
Sbjct: 212 A 212


>UniRef50_Q7Q2K7 Cluster: ENSANGP00000003675; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000003675 - Anopheles gambiae
           str. PEST
          Length = 756

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 24/49 (48%), Positives = 27/49 (55%)
 Frame = +3

Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           NRR  T  A  T  +  +    NRCQYCR KKCI  GM   AVR  R+P
Sbjct: 315 NRRVYTCVADGTCEITKA--QRNRCQYCRFKKCIEQGMVLQAVREDRMP 361


>UniRef50_A7TAF5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 261

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVP-KREKARILAAMQQSS----SSRAHEQAAAAELD 512
           RCQYCR +KC+A+GM ++AVR  R P  R + + L  +++++    SS    Q   A  D
Sbjct: 65  RCQYCRFQKCLALGMLKEAVREDRAPGGRPRIKSLIGLKENAETFVSSELIIQLIQARPD 124

Query: 513 DAP-RLLARVVRA 548
             P R L R+ R+
Sbjct: 125 AIPKRRLIRLPRS 137


>UniRef50_A7MAD8 Cluster: Hormone receptor-like in 4; n=3; Aedes
            aegypti|Rep: Hormone receptor-like in 4 - Aedes aegypti
            (Yellowfever mosquito)
          Length = 1263

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 24/49 (48%), Positives = 27/49 (55%)
 Frame = +3

Query: 279  NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
            NRR  T  A  T  +  +    NRCQYCR KKCI  GM   AVR  R+P
Sbjct: 861  NRRVYTCVADGTCEITKA--QRNRCQYCRFKKCIEQGMVLQAVREDRMP 907


>UniRef50_O76202 Cluster: Protein ultraspiracle homolog; n=5;
           Ditrysia|Rep: Protein ultraspiracle homolog -
           Choristoneura fumiferana (Spruce budworm)
          Length = 472

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 24/63 (38%), Positives = 35/63 (55%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQYCR +KC+A GM R+AV+  R   +  AR       SSS +  ++ +   L +   
Sbjct: 169 NRCQYCRYQKCLACGMKREAVQEER---QRNARGAEDAHPSSSVQVSDELSIERLTEMES 225

Query: 525 LLA 533
           L+A
Sbjct: 226 LVA 228


>UniRef50_Q9W539 Cluster: Hormone receptor 4; n=2; Pancrustacea|Rep:
            Hormone receptor 4 - Drosophila melanogaster (Fruit fly)
          Length = 1518

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 24/49 (48%), Positives = 27/49 (55%)
 Frame = +3

Query: 279  NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
            NRR  T  A  T  +  +    NRCQYCR KKCI  GM   AVR  R+P
Sbjct: 951  NRRVYTCVADGTCEITKA--QRNRCQYCRFKKCIEQGMVLQAVREDRMP 997


>UniRef50_Q95WG3 Cluster: Nuclear receptor AmNR2; n=2;
           Hexacorallia|Rep: Nuclear receptor AmNR2 - Acropora
           millepora (Coral)
          Length = 448

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           ++ NRCQYCR  KC+A GM ++AVR  R P
Sbjct: 133 ISRNRCQYCRFNKCLAQGMLKEAVREDRTP 162


>UniRef50_Q4KXQ1 Cluster: TR4/TR2; n=11; Eumetazoa|Rep: TR4/TR2 -
           Schistosoma mansoni (Blood fluke)
          Length = 1943

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           NRCQYCRL+KC+AVGM  +AV+  R P
Sbjct: 654 NRCQYCRLQKCLAVGMRSEAVQNERRP 680


>UniRef50_Q17K29 Cluster: Nuclear hormone receptor; n=2;
           Culicidae|Rep: Nuclear hormone receptor - Aedes aegypti
           (Yellowfever mosquito)
          Length = 630

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 18/31 (58%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCRL+KC+A GM  D+V+  R P  +K
Sbjct: 100 NRCQYCRLQKCLACGMRSDSVQHERKPIIDK 130


>UniRef50_O61227 Cluster: Nuclear receptor; n=1; Tenebrio
           molitor|Rep: Nuclear receptor - Tenebrio molitor (Yellow
           mealworm)
          Length = 489

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 18/31 (58%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCRL+KC+A GM  D+V+  R P  +K
Sbjct: 80  NRCQYCRLQKCLACGMRSDSVQHERKPIIDK 110


>UniRef50_A7S286 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 344

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVP-KREKARILAAMQQSSSS 476
           RCQYCR +KC+A+GM ++AVR  R P  R + + L  +++++ +
Sbjct: 65  RCQYCRFQKCLALGMLKEAVREDRAPGGRPRIKSLIGLKENAET 108


>UniRef50_UPI0000E479AD Cluster: PREDICTED: similar to MGC79469
           protein; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to MGC79469 protein -
           Strongylocentrotus purpuratus
          Length = 611

 Score = 43.6 bits (98), Expect = 0.004
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           R  + + S    NRCQYCRL KC+ VGM+R A+R   +P
Sbjct: 242 RDKNCMMSRQKRNRCQYCRLLKCLQVGMNRKAIREDGMP 280


>UniRef50_Q703I8 Cluster: Zinc finger transcription factor; n=2;
           Tribolium castaneum|Rep: Zinc finger transcription
           factor - Tribolium castaneum (Red flour beetle)
          Length = 228

 Score = 43.6 bits (98), Expect = 0.004
 Identities = 26/81 (32%), Positives = 36/81 (44%)
 Frame = +3

Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
           G  YN   +    +     V +      C+ CRL+KC+ VGMS+   R+GR     K   
Sbjct: 30  GRTYNNISSISECKNNGECVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHC 89

Query: 447 LAAMQQSSSSRAHEQAAAAEL 509
           L   QQ + +     AAAA L
Sbjct: 90  LLQEQQQAGA---NMAAAANL 107


>UniRef50_P90892 Cluster: Defective fasciculation of axons protein
           1; n=2; Caenorhabditis|Rep: Defective fasciculation of
           axons protein 1 - Caenorhabditis elegans
          Length = 419

 Score = 43.6 bits (98), Expect = 0.004
 Identities = 23/52 (44%), Positives = 30/52 (57%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAA 500
           N+CQ CRLKKC+  GM++DAV+  R P R  A I  A+     +   E A A
Sbjct: 153 NQCQACRLKKCLNKGMNKDAVQNERQP-RNTATIRPALDMDPQNFFREYAGA 203


>UniRef50_P18102 Cluster: Protein tailless; n=10; Diptera|Rep:
           Protein tailless - Drosophila melanogaster (Fruit fly)
          Length = 452

 Score = 43.6 bits (98), Expect = 0.004
 Identities = 20/48 (41%), Positives = 29/48 (60%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           N+C+ CRL+KC  VGM++DAV+  R P+    R   AM + +   A E
Sbjct: 86  NQCRACRLRKCFEVGMNKDAVQHERGPRNSTLRRHMAMYKDAMMGAGE 133


>UniRef50_Q15406 Cluster: Orphan nuclear receptor NR6A1; n=53;
           Euteleostomi|Rep: Orphan nuclear receptor NR6A1 - Homo
           sapiens (Human)
          Length = 480

 Score = 43.6 bits (98), Expect = 0.004
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           R  + V S    NRCQYCRL KC+ +GM+R A+R   +P
Sbjct: 98  RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 136


>UniRef50_Q90WV5 Cluster: Photoreceptor-specific nuclear receptor;
           n=7; Coelomata|Rep: Photoreceptor-specific nuclear
           receptor - Gallus gallus (Chicken)
          Length = 406

 Score = 43.2 bits (97), Expect = 0.005
 Identities = 25/69 (36%), Positives = 35/69 (50%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           N+CQ CRLKKC+  GM++DAV+  R P R  A++     +  +    E  AA    D P 
Sbjct: 86  NQCQACRLKKCLQAGMNKDAVQNERQP-RSTAQVRLDSIELDAELPPEHVAATR--DVPP 142

Query: 525 LLARVVRAH 551
           +     R H
Sbjct: 143 VPCPAPRGH 151


>UniRef50_A5HL80 Cluster: Retinoid X receptor alpha 2; n=2;
           Clupeocephala|Rep: Retinoid X receptor alpha 2 - Oryzias
           latipes (Medaka fish) (Japanese ricefish)
          Length = 118

 Score = 43.2 bits (97), Expect = 0.005
 Identities = 17/31 (54%), Positives = 24/31 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A+GM R+AV+  R   +E+
Sbjct: 54  NRCQYCRYQKCLAMGMKREAVQEERQRGKER 84


>UniRef50_Q16IX1 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 295

 Score = 43.2 bits (97), Expect = 0.005
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +3

Query: 243 AVTRRASSGDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
           A TR +  G  YN   +    +     V +      C+ CRL+KC+ VGMS+   R+GR
Sbjct: 26  ADTRTSFFGRTYNNLSSISECKNNGECVINKKNRTACKACRLRKCLVVGMSKSGSRYGR 84


>UniRef50_UPI000051A33D Cluster: PREDICTED: similar to
           photoreceptor-specific nuclear receptor isoform b; n=1;
           Apis mellifera|Rep: PREDICTED: similar to
           photoreceptor-specific nuclear receptor isoform b - Apis
           mellifera
          Length = 402

 Score = 42.7 bits (96), Expect = 0.007
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSS 470
           N+CQ CR  KC+ V M RDAV+  R P+   + + AA +  S
Sbjct: 69  NQCQACRFTKCLQVNMKRDAVQHERAPRNTSSLVAAARRGPS 110


>UniRef50_UPI000065FDEF Cluster: Homolog of Gallus gallus "Nuclear
           orphan receptor ROR-beta.; n=1; Takifugu rubripes|Rep:
           Homolog of Gallus gallus "Nuclear orphan receptor
           ROR-beta. - Takifugu rubripes
          Length = 538

 Score = 42.7 bits (96), Expect = 0.007
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 19/64 (29%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRD-------------------AVRFGRVPKREKARILAAMQQS 467
           NRCQ+CRL+KC+A+GMSRD                   AV+FGR+ K+++  + A +Q+ 
Sbjct: 60  NRCQHCRLQKCLALGMSRDGLWVTFLDSSFSIFFLILLAVKFGRMSKKQRDSLYAEVQKH 119

Query: 468 SSSR 479
             S+
Sbjct: 120 QQSQ 123


>UniRef50_Q95WG1 Cluster: Nuclear receptor AmNR4 isoform A; n=3;
           Acropora millepora|Rep: Nuclear receptor AmNR4 isoform A
           - Acropora millepora (Coral)
          Length = 416

 Score = 42.7 bits (96), Expect = 0.007
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           NRCQ CRLKKC+ +GM R+AV+  R P
Sbjct: 88  NRCQRCRLKKCLTMGMKREAVQCERKP 114


>UniRef50_Q617F2 Cluster: Putative uncharacterized protein CBG14997;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG14997 - Caenorhabditis
           briggsae
          Length = 457

 Score = 42.7 bits (96), Expect = 0.007
 Identities = 19/28 (67%), Positives = 21/28 (75%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK 428
           NRC+ CRLKKC AVGM R+AVR  R  K
Sbjct: 72  NRCRQCRLKKCEAVGMDREAVRTERKKK 99


>UniRef50_Q4H3F3 Cluster: Nuclear receptor; n=1; Ciona
           intestinalis|Rep: Nuclear receptor - Ciona intestinalis
           (Transparent sea squirt)
          Length = 694

 Score = 42.7 bits (96), Expect = 0.007
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           R+ + V S    NRCQ+CRL KC+ +GM+R A+R   +P
Sbjct: 141 RSKNCVMSRKQRNRCQFCRLLKCLQMGMNRKAIREDGMP 179


>UniRef50_P28702 Cluster: Retinoic acid receptor RXR-beta; n=240;
           Coelomata|Rep: Retinoic acid receptor RXR-beta - Homo
           sapiens (Human)
          Length = 533

 Score = 42.7 bits (96), Expect = 0.007
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285


>UniRef50_Q9XVV3 Cluster: Nuclear hormone receptor family member
           nhr-67; n=3; Caenorhabditis|Rep: Nuclear hormone
           receptor family member nhr-67 - Caenorhabditis elegans
          Length = 416

 Score = 42.7 bits (96), Expect = 0.007
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
           N+C+ CRL+KC+ +GM++DAV+  R P+    R    M    SS
Sbjct: 76  NQCRACRLRKCLEIGMNKDAVQHERGPRNSSLRRQQMMFDHGSS 119


>UniRef50_P41830 Cluster: Steroid hormone receptor family member
           cnr14; n=3; Caenorhabditis elegans|Rep: Steroid hormone
           receptor family member cnr14 - Caenorhabditis elegans
          Length = 534

 Score = 42.7 bits (96), Expect = 0.007
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           NRCQYCR KKC+  GMS+D+VR
Sbjct: 201 NRCQYCRFKKCLDSGMSKDSVR 222



 Score = 40.3 bits (90), Expect = 0.037
 Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRSIQ+KI YR C K Q C I R +R
Sbjct: 167 SCEGCKGFFRRSIQRKIDYR-CLKQQVCEIKRESR 200


>UniRef50_UPI0000DB6EB1 Cluster: PREDICTED: similar to Nuclear
           Hormone Receptor family member (nhr-91); n=1; Apis
           mellifera|Rep: PREDICTED: similar to Nuclear Hormone
           Receptor family member (nhr-91) - Apis mellifera
          Length = 914

 Score = 42.3 bits (95), Expect = 0.009
 Identities = 18/27 (66%), Positives = 19/27 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           NRCQYCR KKCI  GM   AVR  R+P
Sbjct: 550 NRCQYCRFKKCIEQGMVLQAVREDRMP 576


>UniRef50_Q9NCL0 Cluster: Tailless ortholog; n=3; Coelomata|Rep:
           Tailless ortholog - Tribolium castaneum (Red flour
           beetle)
          Length = 406

 Score = 42.3 bits (95), Expect = 0.009
 Identities = 22/55 (40%), Positives = 31/55 (56%)
 Frame = +3

Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443
           NR+Y    A+   S +      N+C+ CRLKKC  VGM++DAV+  R P+    R
Sbjct: 69  NRQY-VCKAKDEGSCIIDKTHRNQCRACRLKKCQNVGMNKDAVQHERGPRNSTLR 122


>UniRef50_Q95WF8 Cluster: Nuclear receptor AmNR6; n=2;
           Astrocoeniina|Rep: Nuclear receptor AmNR6 - Acropora
           millepora (Coral)
          Length = 340

 Score = 42.3 bits (95), Expect = 0.009
 Identities = 17/44 (38%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVP-KREKARILAAMQQSSSS 476
           RCQ+CR +KC+++GM ++AVR  R P  R + + L  M++++ +
Sbjct: 62  RCQFCRFQKCLSLGMLKEAVREDRAPGGRPRIKSLMGMKENADT 105


>UniRef50_Q8WSJ4 Cluster: Hormone receptor 4; n=3; Obtectomera|Rep:
           Hormone receptor 4 - Manduca sexta (Tobacco hawkmoth)
           (Tobacco hornworm)
          Length = 743

 Score = 42.3 bits (95), Expect = 0.009
 Identities = 18/27 (66%), Positives = 19/27 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           NRCQYCR KKCI  GM   AVR  R+P
Sbjct: 392 NRCQYCRFKKCIEQGMVLQAVREDRMP 418


>UniRef50_Q26622 Cluster: Orphan steroid hormone receptor 2; n=7;
           Bilateria|Rep: Orphan steroid hormone receptor 2 -
           Strongylocentrotus purpuratus (Purple sea urchin)
          Length = 583

 Score = 42.3 bits (95), Expect = 0.009
 Identities = 16/31 (51%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCRL+KC+ +GM  D+V+  R P + +
Sbjct: 137 NRCQYCRLQKCLDMGMKSDSVQCERSPLKTR 167



 Score = 32.3 bits (70), Expect = 9.9
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFF+RSI++ + Y  C  N+ C I++ NR
Sbjct: 103 SCEGCKGFFKRSIRKHLGY-TCRGNKDCQIIKHNR 136


>UniRef50_P13054 Cluster: Knirps-related protein; n=2;
           Sophophora|Rep: Knirps-related protein - Drosophila
           melanogaster (Fruit fly)
          Length = 647

 Score = 42.3 bits (95), Expect = 0.009
 Identities = 22/72 (30%), Positives = 31/72 (43%)
 Frame = +3

Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
           G  YN   +    +     + +      C+ CRLKKC+ VGMS+   R+GR     K   
Sbjct: 39  GRSYNNLSSISDCKNNGECIINKKNRTACKACRLKKCLMVGMSKSGSRYGRRSNWFKIHC 98

Query: 447 LAAMQQSSSSRA 482
           L   QQ  +  A
Sbjct: 99  LLQEQQQQAVAA 110


>UniRef50_UPI00015B573C Cluster: PREDICTED: similar to thr4; n=1;
           Nasonia vitripennis|Rep: PREDICTED: similar to thr4 -
           Nasonia vitripennis
          Length = 916

 Score = 41.9 bits (94), Expect = 0.012
 Identities = 22/49 (44%), Positives = 27/49 (55%)
 Frame = +3

Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           NRR  T  A  +  +  +    NRCQYCR KKC+  GM   AVR  R+P
Sbjct: 535 NRRIYTCVAEGSCEITKA--QRNRCQYCRFKKCMDQGMVLQAVREDRMP 581


>UniRef50_UPI0000588887 Cluster: PREDICTED: similar to GA10225-PA;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to GA10225-PA - Strongylocentrotus purpuratus
          Length = 483

 Score = 41.9 bits (94), Expect = 0.012
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           N C YCRLKKC AV M++ AV+  R P+++K
Sbjct: 61  NWCPYCRLKKCFAVNMNKSAVQEERGPRKKK 91


>UniRef50_Q4T0V6 Cluster: Chromosome undetermined SCAF10841, whole
           genome shotgun sequence; n=2; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF10841,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 467

 Score = 41.9 bits (94), Expect = 0.012
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM----QQSSSSRAHEQAAAAELD 512
           N+CQ CRLKKC+  GM++DAV+  R P+      L A+    ++   +   E    +   
Sbjct: 106 NQCQACRLKKCLQAGMNKDAVQNERQPRSTAQVRLDAIDIDPEKEHLATTREPTTTSSSS 165

Query: 513 DAPRLLARVVRAHL 554
            +  +L   VR H+
Sbjct: 166 SSTAILLHRVRPHV 179


>UniRef50_Q4RXK2 Cluster: Chromosome 11 SCAF14979, whole genome
           shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 11
           SCAF14979, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 621

 Score = 41.9 bits (94), Expect = 0.012
 Identities = 18/34 (52%), Positives = 26/34 (76%), Gaps = 2/34 (5%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRD--AVRFGRVPKREKA 440
           NRCQ+CRL+KC+A+GMSRD   +R+    +R+ A
Sbjct: 60  NRCQHCRLQKCLALGMSRDEALIRWWASSRRDPA 93


>UniRef50_Q4U1Y2 Cluster: Steroid hormone receptor 3; n=1;
           Strongylocentrotus purpuratus|Rep: Steroid hormone
           receptor 3 - Strongylocentrotus purpuratus (Purple sea
           urchin)
          Length = 715

 Score = 41.9 bits (94), Expect = 0.012
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           NRCQYCR +KC+ +GM  +AVR  R+P
Sbjct: 321 NRCQYCRFQKCLHMGMMLEAVREDRMP 347


>UniRef50_Q0IGD6 Cluster: Tailless; n=1; Aedes aegypti|Rep: Tailless
           - Aedes aegypti (Yellowfever mosquito)
          Length = 397

 Score = 41.9 bits (94), Expect = 0.012
 Identities = 17/33 (51%), Positives = 23/33 (69%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443
           N+C+ CRLKKC  VGM++DAV+  R P+    R
Sbjct: 85  NQCRACRLKKCFEVGMNKDAVQHERGPRSSTLR 117


>UniRef50_A7S012 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 364

 Score = 41.9 bits (94), Expect = 0.012
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443
           N+CQ CRL+KC  + M+RDAV+  R P+  + R
Sbjct: 54  NQCQACRLRKCFEMNMNRDAVQHERAPRTSQIR 86


>UniRef50_P49116 Cluster: Orphan nuclear receptor TR4; n=13;
           Eumetazoa|Rep: Orphan nuclear receptor TR4 - Homo
           sapiens (Human)
          Length = 596

 Score = 41.9 bits (94), Expect = 0.012
 Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
           NRCQ+CRLKKC+ +GM  ++V+  R P   +REK    AA
Sbjct: 167 NRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPSNCAA 206


>UniRef50_P43354 Cluster: Orphan nuclear receptor NR4A2; n=77;
           Euteleostomi|Rep: Orphan nuclear receptor NR4A2 - Homo
           sapiens (Human)
          Length = 598

 Score = 41.9 bits (94), Expect = 0.012
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
           NRCQYCR +KC+AVGM ++ VR        GR+P + K+
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 351


>UniRef50_Q10902 Cluster: Nuclear hormone receptor family member
           nhr-2; n=4; Caenorhabditis elegans|Rep: Nuclear hormone
           receptor family member nhr-2 - Caenorhabditis elegans
          Length = 359

 Score = 41.9 bits (94), Expect = 0.012
 Identities = 20/51 (39%), Positives = 29/51 (56%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAA 500
           RCQ CR  KC+AVGM+RD VR  +   ++    +A+     +S+  E  AA
Sbjct: 163 RCQACRFAKCLAVGMNRDNVRVNKETDKDVKPSVASPNFEMTSQVKELTAA 213


>UniRef50_UPI00015B4A62 Cluster: PREDICTED: similar to nuclear
           receptor; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to nuclear receptor - Nasonia vitripennis
          Length = 427

 Score = 41.5 bits (93), Expect = 0.016
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM 458
           N+CQ CR +KC+ V M RDAV+  R P R     +AAM
Sbjct: 61  NQCQACRFRKCLQVNMKRDAVQHERAP-RSATTSMAAM 97


>UniRef50_UPI0000DB771B Cluster: PREDICTED: similar to Hormone
           receptor-like in 38 CG1864-PB, isoform B; n=3; Apis
           mellifera|Rep: PREDICTED: similar to Hormone
           receptor-like in 38 CG1864-PB, isoform B - Apis
           mellifera
          Length = 787

 Score = 41.5 bits (93), Expect = 0.016
 Identities = 25/72 (34%), Positives = 38/72 (52%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQ+CR +KC+ VGM ++ VR   + K  + R+      S      E   ++ +     
Sbjct: 503 NRCQFCRFQKCLMVGMVKEVVRTDSL-KGRRGRL-----PSKPKSPQESPPSSPVS---- 552

Query: 525 LLARVVRAHLDT 560
           L+  +VRAHLDT
Sbjct: 553 LITALVRAHLDT 564


>UniRef50_Q98ST8 Cluster: Ff1c; n=6; Clupeocephala|Rep: Ff1c - Danio
           rerio (Zebrafish) (Brachydanio rerio)
          Length = 537

 Score = 41.5 bits (93), Expect = 0.016
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = +3

Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRV 422
           N+RY    A+     ++      RC YCR +KC+AVGM ++AVR  R+
Sbjct: 82  NKRYTCAEAQNCPMDLAQR---KRCPYCRFQKCVAVGMKKEAVRADRM 126


>UniRef50_Q7ZZY9 Cluster: Vitamin D receptor; n=1; Petromyzon
           marinus|Rep: Vitamin D receptor - Petromyzon marinus
           (Sea lamprey)
          Length = 406

 Score = 41.5 bits (93), Expect = 0.016
 Identities = 21/70 (30%), Positives = 36/70 (51%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
           CQ CRLK+C  +GM ++ +      +R+K  I+    + S+   H       L++  RL+
Sbjct: 79  CQACRLKRCRDIGMMKELIMTEEEVQRKKEIIMKRKLEDSAREVHTPQL---LEEQERLI 135

Query: 531 ARVVRAHLDT 560
           A ++ AH  T
Sbjct: 136 ATLIEAHRKT 145


>UniRef50_Q4SD43 Cluster: Chromosome 1 SCAF14643, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 1 SCAF14643, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 350

 Score = 41.5 bits (93), Expect = 0.016
 Identities = 15/19 (78%), Positives = 19/19 (100%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRD 401
           NRCQ+CRL+KC+A+GMSRD
Sbjct: 60  NRCQHCRLQKCLALGMSRD 78


>UniRef50_Q49MA6 Cluster: Nuclear receptor 2DBD-gamma; n=3;
           Bilateria|Rep: Nuclear receptor 2DBD-gamma - Schistosoma
           mansoni (Blood fluke)
          Length = 1861

 Score = 41.5 bits (93), Expect = 0.016
 Identities = 20/57 (35%), Positives = 30/57 (52%)
 Frame = +3

Query: 306 RRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
           R   +   +G T N C+ CR ++C+AVGMS+ AV     P   K R    ++Q  S+
Sbjct: 518 RNGGNCAVTGATRNNCKSCRYRRCLAVGMSKHAVVSALQPNAIKHRCAVEIEQIRSA 574


>UniRef50_Q1RPY8 Cluster: Nuclear receptor; n=2; Ciona
           intestinalis|Rep: Nuclear receptor - Ciona intestinalis
           (Transparent sea squirt)
          Length = 692

 Score = 41.5 bits (93), Expect = 0.016
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+ +GM  D+V+  R P  ++
Sbjct: 256 NRCQYCRFQKCVLMGMKSDSVQCERSPMHKQ 286


>UniRef50_Q92570 Cluster: Orphan nuclear receptor NR4A3; n=26;
           Euteleostomi|Rep: Orphan nuclear receptor NR4A3 - Homo
           sapiens (Human)
          Length = 626

 Score = 41.5 bits (93), Expect = 0.016
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
           NRCQYCR +KC++VGM ++ VR        GR+P + K+ +     Q S
Sbjct: 342 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 390


>UniRef50_Q9Y466 Cluster: Orphan nuclear receptor NR2E1; n=38;
           Eumetazoa|Rep: Orphan nuclear receptor NR2E1 - Homo
           sapiens (Human)
          Length = 385

 Score = 41.5 bits (93), Expect = 0.016
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500
           N+C+ CRLKKC+ V M++DAV+  R P+    R   A+     ++ + + AH  +AA
Sbjct: 68  NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 124


>UniRef50_P15370 Cluster: Protein embryonic gonad; n=2;
           Sophophora|Rep: Protein embryonic gonad - Drosophila
           melanogaster (Fruit fly)
          Length = 373

 Score = 41.5 bits (93), Expect = 0.016
 Identities = 22/69 (31%), Positives = 31/69 (44%)
 Frame = +3

Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
           G  YN        +     V +      C+ CRL+KC+ VGMS+   R+GR     K   
Sbjct: 30  GRTYNNIAAIAGCKHNGDCVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHC 89

Query: 447 LAAMQQSSS 473
           L   QQ++S
Sbjct: 90  LLQEQQTTS 98


>UniRef50_UPI0000E47369 Cluster: PREDICTED: similar to ROR-alpha 1,
           partial; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to ROR-alpha 1, partial -
           Strongylocentrotus purpuratus
          Length = 497

 Score = 36.7 bits (81), Expect(2) = 0.018
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGM 392
           NRCQ+CR KKC+AVGM
Sbjct: 90  NRCQHCRFKKCLAVGM 105



 Score = 23.8 bits (49), Expect(2) = 0.018
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +3

Query: 399 DAVRFGRVPKREK 437
           +AVR+GRVP+R K
Sbjct: 140 EAVRYGRVPQRGK 152


>UniRef50_Q7PUT9 Cluster: ENSANGP00000017626; n=12;
           Endopterygota|Rep: ENSANGP00000017626 - Anopheles
           gambiae str. PEST
          Length = 485

 Score = 41.1 bits (92), Expect = 0.021
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           NRCQYCR +KC+A GM R+AV+
Sbjct: 186 NRCQYCRYQKCLACGMKREAVQ 207


>UniRef50_A0NCV2 Cluster: ENSANGP00000031834; n=2; Culicidae|Rep:
           ENSANGP00000031834 - Anopheles gambiae str. PEST
          Length = 98

 Score = 41.1 bits (92), Expect = 0.021
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = +3

Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
           G  YN   +    +     + +      C+ CRL+KC+ VGMS+   R+GR     K   
Sbjct: 30  GRSYNNLSSISECKNNGECIINKKNRTACKACRLRKCLMVGMSKSGSRYGRRSNWFKIHC 89

Query: 447 LAAMQQSSS 473
           L   QQ ++
Sbjct: 90  LLQEQQQAA 98


>UniRef50_P10827 Cluster: Thyroid hormone receptor alpha; n=186;
           root|Rep: Thyroid hormone receptor alpha - Homo sapiens
           (Human)
          Length = 490

 Score = 41.1 bits (92), Expect = 0.021
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +3

Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
           S  V   +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95  SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125


>UniRef50_Q9N4B8 Cluster: Nuclear hormone receptor family member
           nhr-41; n=5; Caenorhabditis|Rep: Nuclear hormone
           receptor family member nhr-41 - Caenorhabditis elegans
          Length = 615

 Score = 41.1 bits (92), Expect = 0.021
 Identities = 15/27 (55%), Positives = 22/27 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           NRCQYCRL+KC+++GM  ++V+  R P
Sbjct: 202 NRCQYCRLRKCLSMGMRSESVQAERRP 228


>UniRef50_UPI0000F1FFCD Cluster: PREDICTED: neural orphan nuclear
           receptor NOR1 isoform 1; n=1; Danio rerio|Rep:
           PREDICTED: neural orphan nuclear receptor NOR1 isoform 1
           - Danio rerio
          Length = 575

 Score = 40.7 bits (91), Expect = 0.028
 Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
           NRCQYCR +KC++VGM ++ VR        GR+P + K+
Sbjct: 305 NRCQYCRFQKCLSVGMVKEVVRTDNLKGRRGRLPSKPKS 343


>UniRef50_UPI0000D55997 Cluster: PREDICTED: similar to
           Knirps-related protein, partial; n=1; Tribolium
           castaneum|Rep: PREDICTED: similar to Knirps-related
           protein, partial - Tribolium castaneum
          Length = 330

 Score = 40.7 bits (91), Expect = 0.028
 Identities = 21/66 (31%), Positives = 29/66 (43%)
 Frame = +3

Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
           G  YN   +    +     V +      C+ CRL+KC+ VGMS+   R+GR     K   
Sbjct: 30  GRSYNNLSSISECKNNGECVINKKNRTACKACRLRKCLMVGMSKSGSRYGRRSNWFKIHC 89

Query: 447 LAAMQQ 464
           L   QQ
Sbjct: 90  LLQEQQ 95


>UniRef50_UPI0000D556F1 Cluster: PREDICTED: similar to CG9019-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG9019-PA - Tribolium castaneum
          Length = 483

 Score = 40.7 bits (91), Expect = 0.028
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH 485
           N+C+ CRL KC    M++DAV+  R P++ K +  +  Q   S   H
Sbjct: 89  NQCRACRLSKCFQASMNKDAVQHERGPRKPKLQASSNQQMQPSPVGH 135


>UniRef50_UPI0000584A1E Cluster: PREDICTED: similar to nuclear
           receptor AmNR2; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to nuclear receptor AmNR2 -
           Strongylocentrotus purpuratus
          Length = 448

 Score = 40.7 bits (91), Expect = 0.028
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           N CQ+CR +KC+  GM  DAVR  R+P
Sbjct: 119 NSCQFCRFQKCLTAGMKTDAVREDRLP 145


>UniRef50_UPI000051A1CD Cluster: PREDICTED: similar to
           Knirps-related protein; n=1; Apis mellifera|Rep:
           PREDICTED: similar to Knirps-related protein - Apis
           mellifera
          Length = 420

 Score = 40.7 bits (91), Expect = 0.028
 Identities = 21/74 (28%), Positives = 31/74 (41%)
 Frame = +3

Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
           G  YN   +    +     V +      C+ CRL+KC+ VGMS+   R+GR     K   
Sbjct: 30  GRSYNNLSSISECKNGGECVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHC 89

Query: 447 LAAMQQSSSSRAHE 488
           L   QQ    +  +
Sbjct: 90  LLQEQQQQQQQQQQ 103


>UniRef50_Q4RI46 Cluster: Chromosome 8 SCAF15044, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 8
           SCAF15044, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 650

 Score = 40.7 bits (91), Expect = 0.028
 Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
           NRCQYCR +KC++VGM ++ VR        GR+P + K+
Sbjct: 338 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKS 376


>UniRef50_Q2M0D5 Cluster: GA17924-PA; n=1; Drosophila
           pseudoobscura|Rep: GA17924-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 803

 Score = 40.7 bits (91), Expect = 0.028
 Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 10/49 (20%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVR----------FGRVPKREKARILAAMQQ 464
           RC YCR +KC+ VGM  +AVR          FG + KR++AR L  M+Q
Sbjct: 390 RCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQ 438


>UniRef50_O96562 Cluster: Retinoic acid X receptor; n=1; Tripedalia
           cystophora|Rep: Retinoic acid X receptor - Tripedalia
           cystophora (Jellyfish)
          Length = 435

 Score = 40.7 bits (91), Expect = 0.028
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+ VGM  +AV+   + K  K
Sbjct: 156 NRCQYCRFQKCVQVGMKPEAVQDETLKKERK 186


>UniRef50_Q20765 Cluster: Nuclear hormone receptor family member
           nhr-7; n=2; Caenorhabditis|Rep: Nuclear hormone receptor
           family member nhr-7 - Caenorhabditis elegans
          Length = 536

 Score = 40.7 bits (91), Expect = 0.028
 Identities = 18/50 (36%), Positives = 29/50 (58%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N C+YCR +KC+ VGM+ D VR  R   ++   +L+  +  S S ++  A
Sbjct: 60  NACRYCRFRKCLLVGMNPDYVRPDREKSKKGKTVLSKKKSVSRSLSYRLA 109


>UniRef50_O45666 Cluster: Nuclear hormone receptor family member
           nhr-49; n=5; Caenorhabditis|Rep: Nuclear hormone
           receptor family member nhr-49 - Caenorhabditis elegans
          Length = 501

 Score = 40.7 bits (91), Expect = 0.028
 Identities = 14/25 (56%), Positives = 20/25 (80%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
           C+YCR +KC+ VGM R+A++F R P
Sbjct: 87  CRYCRFQKCVQVGMKREAIQFERDP 111


>UniRef50_P33244 Cluster: Nuclear hormone receptor FTZ-F1; n=4;
           Coelomata|Rep: Nuclear hormone receptor FTZ-F1 -
           Drosophila melanogaster (Fruit fly)
          Length = 1027

 Score = 40.7 bits (91), Expect = 0.028
 Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 10/49 (20%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVR----------FGRVPKREKARILAAMQQ 464
           RC YCR +KC+ VGM  +AVR          FG + KR++AR L  M+Q
Sbjct: 559 RCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQ 607


>UniRef50_UPI0000E4A84F Cluster: PREDICTED: similar to retinoic X
           receptor-like protein, partial; n=3; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to retinoic X
           receptor-like protein, partial - Strongylocentrotus
           purpuratus
          Length = 308

 Score = 40.3 bits (90), Expect = 0.037
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK 428
           NRCQYCR +KC+ +GM R+AV+  R  K
Sbjct: 183 NRCQYCRYQKCLGMGMRREAVQEERQRK 210


>UniRef50_Q90Y24 Cluster: Thyroid hormone receptor alpha small
           isoform; n=4; Euteleostomi|Rep: Thyroid hormone receptor
           alpha small isoform - Oreochromis niloticus (Nile
           tilapia) (Tilapia nilotica)
          Length = 241

 Score = 40.3 bits (90), Expect = 0.037
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV 407
           +T N+CQ CR KKCIAVGM+ D V
Sbjct: 24  ITRNQCQLCRFKKCIAVGMAMDLV 47


>UniRef50_Q4RI90 Cluster: Chromosome 8 SCAF15044, whole genome
           shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 8
           SCAF15044, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 503

 Score = 40.3 bits (90), Expect = 0.037
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRD 401
           NRCQ+CRL+KC+A GMSRD
Sbjct: 58  NRCQHCRLQKCLAQGMSRD 76


>UniRef50_Q9NB03 Cluster: Nuclear receptor FTZ-F1 protein; n=2;
           Aedes aegypti|Rep: Nuclear receptor FTZ-F1 protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 840

 Score = 40.3 bits (90), Expect = 0.037
 Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 10/49 (20%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVR----------FGRVPKREKARILAAMQQ 464
           RC YCR +KC+ VGM  +AVR          FG + KR++AR L  M+Q
Sbjct: 388 RCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQIMRQ 436


>UniRef50_Q4H333 Cluster: Nuclear receptor; n=2; Coelomata|Rep:
           Nuclear receptor - Ciona intestinalis (Transparent sea
           squirt)
          Length = 1054

 Score = 40.3 bits (90), Expect = 0.037
 Identities = 24/72 (33%), Positives = 36/72 (50%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQ+CR +KC+AVGM ++ VR   + K  + R+        S     +   A       
Sbjct: 765 NRCQFCRFEKCLAVGMVKEVVRTDHL-KGRRGRL-------PSKPKGPKDPVAPPSPPVS 816

Query: 525 LLARVVRAHLDT 560
            +  +VRAH+DT
Sbjct: 817 FITSLVRAHVDT 828


>UniRef50_Q3I5Q0 Cluster: RXRc nuclear hormone receptor; n=4;
           Decapoda|Rep: RXRc nuclear hormone receptor - Gecarcinus
           lateralis (Blackback land crab)
          Length = 363

 Score = 40.3 bits (90), Expect = 0.037
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           NRCQYCR +KC+ +GM R+AV+
Sbjct: 122 NRCQYCRYQKCLTMGMKREAVQ 143


>UniRef50_UPI0000E460D2 Cluster: PREDICTED: similar to orphan
           nuclear hormone receptor; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to orphan nuclear
           hormone receptor - Strongylocentrotus purpuratus
          Length = 723

 Score = 39.9 bits (89), Expect = 0.049
 Identities = 24/71 (33%), Positives = 36/71 (50%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQYCR +KC+A GM ++ VR   +  R +   L   Q++S          +       
Sbjct: 438 NRCQYCRFQKCLACGMVKEVVRTDNL--RGRRGRLPTKQRNSQDLPPPSPPVS------- 488

Query: 525 LLARVVRAHLD 557
           L+  +VRAH+D
Sbjct: 489 LITALVRAHVD 499


>UniRef50_UPI0000DB6F53 Cluster: PREDICTED: similar to nuclear
           receptor subfamily 2, group E, member 1; n=1; Apis
           mellifera|Rep: PREDICTED: similar to nuclear receptor
           subfamily 2, group E, member 1 - Apis mellifera
          Length = 418

 Score = 39.9 bits (89), Expect = 0.049
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443
           N+C+ CRL KCI  GM++DAV+  R P+    R
Sbjct: 101 NQCRACRLAKCIQAGMNKDAVQHERGPRNSTLR 133


>UniRef50_Q9Y1J4 Cluster: Retinoid X receptor RXR-2; n=10;
            Bilateria|Rep: Retinoid X receptor RXR-2 - Schistosoma
            mansoni (Blood fluke)
          Length = 1501

 Score = 39.9 bits (89), Expect = 0.049
 Identities = 17/41 (41%), Positives = 29/41 (70%)
 Frame = +3

Query: 345  NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS 467
            NRCQYCR +KC+  GM R+AV+     +R++ ++ + +Q+S
Sbjct: 965  NRCQYCRYQKCLRAGMRREAVQ----EERQQQQLQSEVQRS 1001


>UniRef50_Q9Y0D1 Cluster: Fushi tarazu-factor 1; n=4;
           Pancrustacea|Rep: Fushi tarazu-factor 1 - Metapenaeus
           ensis (Greasyback shrimp) (Sand shrimp)
          Length = 545

 Score = 39.9 bits (89), Expect = 0.049
 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 10/54 (18%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVR----------FGRVPKREKARILAAMQQSSSSR 479
           RC YCR +KC+ VGM  +AVR          FG + KR++AR L  ++Q   S+
Sbjct: 84  RCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQLLRQRQLSQ 137


>UniRef50_Q8ST32 Cluster: Nuclear receptor RXR; n=1; Dirofilaria
           immitis|Rep: Nuclear receptor RXR - Dirofilaria immitis
           (Canine heartworm)
          Length = 474

 Score = 39.9 bits (89), Expect = 0.049
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431
           NRCQYCR +KC ++GM R+AV+  R   R
Sbjct: 179 NRCQYCRYRKCQSMGMKREAVQEERQSSR 207


>UniRef50_Q2TUU9 Cluster: Two-DBD-nuclear receptor; n=3; Schistosoma
           mansoni|Rep: Two-DBD-nuclear receptor - Schistosoma
           mansoni (Blood fluke)
          Length = 1527

 Score = 39.9 bits (89), Expect = 0.049
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
           N C+ CR ++C+A GMS+   R GR P   K      ++Q  + R +  ++
Sbjct: 618 NACKSCRFRRCLAAGMSKKGSRIGRQPNAVKFHCAIEIKQLQAIRGNSSSS 668


>UniRef50_Q4SGI3 Cluster: Chromosome undetermined SCAF14594, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF14594,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 404

 Score = 39.5 bits (88), Expect = 0.065
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV 407
           +T N+CQ CR KKCIAVGM+ D V
Sbjct: 63  VTRNQCQECRFKKCIAVGMATDLV 86


>UniRef50_A7RX15 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 351

 Score = 39.5 bits (88), Expect = 0.065
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPK 428
           +CQ CR KKC  VGM R+A+R GR  K
Sbjct: 73  QCQACRFKKCATVGMRREAIRRGRPTK 99


>UniRef50_P20153 Cluster: Protein ultraspiracle; n=6;
           Schizophora|Rep: Protein ultraspiracle - Drosophila
           melanogaster (Fruit fly)
          Length = 508

 Score = 39.5 bits (88), Expect = 0.065
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           NRCQYCR +KC+  GM R+AV+
Sbjct: 154 NRCQYCRYQKCLTCGMKREAVQ 175


>UniRef50_Q9U2R6 Cluster: Nuclear hormone receptor family member
           nhr-91; n=5; Caenorhabditis|Rep: Nuclear hormone
           receptor family member nhr-91 - Caenorhabditis elegans
          Length = 474

 Score = 39.5 bits (88), Expect = 0.065
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           NRCQ CR +KCI+ GM  +AVR  R+P
Sbjct: 150 NRCQSCRFRKCISKGMLTEAVREDRMP 176


>UniRef50_P41829 Cluster: Nuclear hormone receptor family member
           nhr-6; n=2; Caenorhabditis|Rep: Nuclear hormone receptor
           family member nhr-6 - Caenorhabditis elegans
          Length = 619

 Score = 39.5 bits (88), Expect = 0.065
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431
           +RCQYCR +KC+ VGM ++ VR G +  R
Sbjct: 318 SRCQYCRYQKCLEVGMVKEIVRHGSLSGR 346


>UniRef50_UPI0000587672 Cluster: PREDICTED: similar to tailless;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to tailless - Strongylocentrotus purpuratus
          Length = 457

 Score = 39.1 bits (87), Expect = 0.086
 Identities = 15/43 (34%), Positives = 28/43 (65%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473
           N+C+ CRL+KC    M++DAV+  R P++ K + + ++   S+
Sbjct: 109 NQCRACRLRKCFEAQMNKDAVQHERGPRKPKNKPMVSIDARST 151


>UniRef50_Q49MV3 Cluster: Nuclear receptor 2DBD-beta; n=2;
           Schistosoma|Rep: Nuclear receptor 2DBD-beta -
           Schistosoma mansoni (Blood fluke)
          Length = 1523

 Score = 39.1 bits (87), Expect = 0.086
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
           N C+ CR ++C+AVGMS+   R GR P   K      + Q ++S
Sbjct: 224 NMCKSCRFQRCLAVGMSKTGSRIGRQPNTIKYYCAREISQLTNS 267


>UniRef50_P49869 Cluster: Probable nuclear hormone receptor HR38;
           n=19; Coelomata|Rep: Probable nuclear hormone receptor
           HR38 - Drosophila melanogaster (Fruit fly)
          Length = 1073

 Score = 39.1 bits (87), Expect = 0.086
 Identities = 23/72 (31%), Positives = 37/72 (51%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQ+CR +KC+ VGM ++ VR   + K  + R+      S      E   +  +     
Sbjct: 794 NRCQFCRFQKCLVVGMVKEVVRTDSL-KGRRGRL-----PSKPKSPQESPPSPPIS---- 843

Query: 525 LLARVVRAHLDT 560
           L+  +VR+H+DT
Sbjct: 844 LITALVRSHVDT 855


>UniRef50_O42554 Cluster: ReverbB; n=2; Danio rerio|Rep: ReverbB -
           Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 43

 Score = 38.7 bits (86), Expect = 0.11
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDA 404
           NRCQ CR KKC+ VGMS DA
Sbjct: 24  NRCQQCRFKKCLLVGMSSDA 43



 Score = 37.5 bits (83), Expect = 0.26
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +2

Query: 275 IQQKIQYRPCTKNQQCSILRINR 343
           +QQ IQY+ C KN+ C I+RINR
Sbjct: 1   MQQNIQYKKCLKNESCPIMRINR 23


>UniRef50_O45117 Cluster: Ultraspiracle; n=3; Endopterygota|Rep:
           Ultraspiracle - Chironomus tentans (Midge)
          Length = 552

 Score = 38.7 bits (86), Expect = 0.11
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           NRCQYCR +KC+  GM R+AV+
Sbjct: 247 NRCQYCRYQKCLNCGMKREAVQ 268


>UniRef50_Q8T7Y2 Cluster: Nuclear orphan receptor; n=1; Bombyx
           mori|Rep: Nuclear orphan receptor - Bombyx mori (Silk
           moth)
          Length = 461

 Score = 38.3 bits (85), Expect = 0.15
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRD 401
           NRCQYCRL+KC+A GM  D
Sbjct: 73  NRCQYCRLQKCLACGMRSD 91


>UniRef50_O77154 Cluster: Nuclear receptor 1; n=2; Ciona
           intestinalis|Rep: Nuclear receptor 1 - Ciona
           intestinalis (Transparent sea squirt)
          Length = 587

 Score = 38.3 bits (85), Expect = 0.15
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAV--RFGRVPKR---EKARILAAMQQSSSSRAHEQAAAAEL 509
           N+CQ CR +KCIA GM+ D V     R+ KR   E+ R L   +  S      +      
Sbjct: 96  NQCQMCRYEKCIATGMATDLVLNEDKRIAKRKLIERNRQLRRHKDISHVMGTWKVGRGS- 154

Query: 510 DDAPRLLARVVRAHLD 557
           DD   +++ VV+AH D
Sbjct: 155 DDDNHVISAVVQAHND 170


>UniRef50_A7J001 Cluster: Rxr1; n=1; Oikopleura dioica|Rep: Rxr1 -
           Oikopleura dioica (Tunicate)
          Length = 239

 Score = 38.3 bits (85), Expect = 0.15
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           NRCQYCR +KC+  GM ++AV+
Sbjct: 44  NRCQYCRYQKCLLAGMKKEAVQ 65


>UniRef50_O17611 Cluster: Nuclear hormone receptor family member
           nhr-100; n=2; Caenorhabditis elegans|Rep: Nuclear
           hormone receptor family member nhr-100 - Caenorhabditis
           elegans
          Length = 437

 Score = 38.3 bits (85), Expect = 0.15
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK 428
           NRC+ CRLK+C+ VGM  +AVR  R  K
Sbjct: 74  NRCRACRLKRCLHVGMDANAVRSERTRK 101


>UniRef50_P10734 Cluster: Zygotic gap protein knirps; n=10;
           Schizophora|Rep: Zygotic gap protein knirps - Drosophila
           melanogaster (Fruit fly)
          Length = 429

 Score = 38.3 bits (85), Expect = 0.15
 Identities = 25/79 (31%), Positives = 35/79 (44%)
 Frame = +3

Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
           G  YN        +     +        C+ CRL+KC  VGMS+   R+GR  +    +I
Sbjct: 30  GRSYNNISTISECKNEGKCIIDKKNRTTCKACRLRKCYNVGMSKGGSRYGR--RSNWFKI 87

Query: 447 LAAMQQSSSSRAHEQAAAA 503
              +Q+      HEQAAAA
Sbjct: 88  HCLLQE------HEQAAAA 100


>UniRef50_P49867 Cluster: Nuclear hormone receptor FTZ-F1; n=4;
           Endopterygota|Rep: Nuclear hormone receptor FTZ-F1 -
           Bombyx mori (Silk moth)
          Length = 534

 Score = 38.3 bits (85), Expect = 0.15
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 10/49 (20%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVR----------FGRVPKREKARILAAMQQ 464
           RC +CR +KC+ VGM  +AVR          FG + KR++AR L  M+Q
Sbjct: 140 RCPFCRFQKCLDVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQMMRQ 188


>UniRef50_UPI00015B6336 Cluster: PREDICTED: similar to zinc finger
           transcription factor; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to zinc finger transcription factor -
           Nasonia vitripennis
          Length = 341

 Score = 37.9 bits (84), Expect = 0.20
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +3

Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
           G  YN   +    +     V +      C+ CRL+KC+ VGMS+   R+GR
Sbjct: 30  GRTYNNLGSISECKNGGVCVINKKNRTACKACRLRKCLMVGMSKSGSRYGR 80


>UniRef50_UPI0000F21183 Cluster: PREDICTED: similar to Hnf4a
           protein; n=1; Danio rerio|Rep: PREDICTED: similar to
           Hnf4a protein - Danio rerio
          Length = 488

 Score = 37.9 bits (84), Expect = 0.20
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131


>UniRef50_UPI0000DB74D6 Cluster: PREDICTED: similar to nuclear
           receptor subfamily 2, group E, member 1; n=1; Apis
           mellifera|Rep: PREDICTED: similar to nuclear receptor
           subfamily 2, group E, member 1 - Apis mellifera
          Length = 351

 Score = 37.9 bits (84), Expect = 0.20
 Identities = 19/36 (52%), Positives = 23/36 (63%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
           N C YCRLKKC  VGM+  AV+  R P R + +I A
Sbjct: 62  NWCPYCRLKKCFTVGMNTAAVQEERGP-RVRTKIAA 96


>UniRef50_UPI0000DB7437 Cluster: PREDICTED: similar to
           Knirps-related protein; n=1; Apis mellifera|Rep:
           PREDICTED: similar to Knirps-related protein - Apis
           mellifera
          Length = 422

 Score = 37.9 bits (84), Expect = 0.20
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +3

Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
           G  YN   +    +     V +      C+ CRL+KC+ VGMS+   R+GR
Sbjct: 30  GRTYNNLGSISECKNGGVCVINKKNRTACKACRLRKCLMVGMSKSGSRYGR 80


>UniRef50_UPI0000DB7436 Cluster: PREDICTED: similar to
           Knirps-related protein; n=1; Apis mellifera|Rep:
           PREDICTED: similar to Knirps-related protein - Apis
           mellifera
          Length = 423

 Score = 37.9 bits (84), Expect = 0.20
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +3

Query: 267 GDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
           G  YN   +    +     V +      C+ CRL+KC+ VGMS+   R+GR
Sbjct: 81  GRTYNNLGSISECKNGGVCVINKKNRTACKACRLRKCLMVGMSKSGSRYGR 131


>UniRef50_Q5RZV7 Cluster: Thyroid hormone receptor beta; n=7;
           Euteleostomi|Rep: Thyroid hormone receptor beta -
           Pseudopleuronectes americanus (Winter flounder)
           (Pleuronectesamericanus)
          Length = 415

 Score = 37.9 bits (84), Expect = 0.20
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV 407
           +T N+CQ CR KKCI VGM+ D V
Sbjct: 81  VTRNQCQECRFKKCIVVGMATDLV 104


>UniRef50_Q8MXH2 Cluster: Nuclear hormone receptor family protein
           66, isoform c; n=10; Caenorhabditis|Rep: Nuclear hormone
           receptor family protein 66, isoform c - Caenorhabditis
           elegans
          Length = 733

 Score = 37.9 bits (84), Expect = 0.20
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +3

Query: 318 SVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
           +VV  G  G +C+ CR +KCI+ GM +++V+  R
Sbjct: 312 TVVKDGSAGQKCRACRFRKCISSGMDKNSVQHRR 345


>UniRef50_Q91766 Cluster: Hepatocyte nuclear factor 4-alpha; n=5;
           Euteleostomi|Rep: Hepatocyte nuclear factor 4-alpha -
           Xenopus laevis (African clawed frog)
          Length = 464

 Score = 37.9 bits (84), Expect = 0.20
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131


>UniRef50_P49698 Cluster: Hepatocyte nuclear factor 4-alpha; n=41;
           Eumetazoa|Rep: Hepatocyte nuclear factor 4-alpha - Mus
           musculus (Mouse)
          Length = 474

 Score = 37.9 bits (84), Expect = 0.20
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131


>UniRef50_P41235 Cluster: Hepatocyte nuclear factor 4-alpha; n=63;
           Chordata|Rep: Hepatocyte nuclear factor 4-alpha - Homo
           sapiens (Human)
          Length = 474

 Score = 37.9 bits (84), Expect = 0.20
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131


>UniRef50_Q2TUT9 Cluster: Nuclear hormone receptor 4A4-like protein;
           n=3; Schistosoma|Rep: Nuclear hormone receptor 4A4-like
           protein - Schistosoma mansoni (Blood fluke)
          Length = 592

 Score = 37.5 bits (83), Expect = 0.26
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           NRC YCR +KC+ VGM ++ VR
Sbjct: 153 NRCHYCRFQKCLKVGMVKEVVR 174


>UniRef50_O61228 Cluster: Thr4 protein; n=2; Tenebrionidae|Rep: Thr4
           protein - Tenebrio molitor (Yellow mealworm)
          Length = 810

 Score = 37.5 bits (83), Expect = 0.26
 Identities = 16/26 (61%), Positives = 17/26 (65%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVP 425
           RC YCR KKCI  GM   AVR  R+P
Sbjct: 451 RCPYCRFKKCIEQGMVLQAVREDRMP 476


>UniRef50_O16890 Cluster: Nuclear hormone receptor family protein
           118; n=2; Caenorhabditis elegans|Rep: Nuclear hormone
           receptor family protein 118 - Caenorhabditis elegans
          Length = 231

 Score = 37.5 bits (83), Expect = 0.26
 Identities = 24/93 (25%), Positives = 43/93 (46%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRC+ CRL+KC   GM   A+R  R  ++ +       +  + + + +  A   L     
Sbjct: 67  NRCRACRLEKCFRAGMDASAIRNKRAKRKSQPESPCTEEIENRALSWQTEAIIAL----- 121

Query: 525 LLARVVRAHLDTCEFHA*SRRFHASQSFVTVPT 623
           L+ +  + H    +F   S    +++SFVT+ T
Sbjct: 122 LMQKNGQTHNKLSQFSGASEFNFSTRSFVTLET 154



 Score = 34.7 bits (76), Expect = 1.9
 Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = +2

Query: 218 VERDSTKCSCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNE 394
           ++R     SC+  +GFFRRSI +K  Y+ C+ + QCSI    R        EK  R   +
Sbjct: 25  IQRHYGTVSCNGCKGFFRRSIWEKRTYK-CSFHNQCSIEHKYRNRCRACRLEKCFRAGMD 83

Query: 395 QRCCAIRSCTQTRESAYPRSDAT 463
               AIR+    R+S  P S  T
Sbjct: 84  --ASAIRNKRAKRKS-QPESPCT 103


>UniRef50_O00482 Cluster: Orphan nuclear receptor NR5A2; n=68;
           Deuterostomia|Rep: Orphan nuclear receptor NR5A2 - Homo
           sapiens (Human)
          Length = 541

 Score = 37.5 bits (83), Expect = 0.26
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC YCR +KC++VGM  +AVR  R+
Sbjct: 137 RCPYCRFQKCLSVGMKLEAVRADRM 161



 Score = 32.3 bits (70), Expect = 9.9
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q   +Y  C +NQ C I +  R+  P    +K
Sbjct: 107 KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 145


>UniRef50_Q4RQL5 Cluster: Chromosome 2 SCAF15004, whole genome
           shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 2
           SCAF15004, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 636

 Score = 37.1 bits (82), Expect = 0.35
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           NRCQ+CR +KC+ VGM R+  R
Sbjct: 315 NRCQFCRFQKCLVVGMVREGKR 336


>UniRef50_Q9GUI3 Cluster: Nuclear hormone receptor family protein
           114, isoform a; n=5; Caenorhabditis|Rep: Nuclear hormone
           receptor family protein 114, isoform a - Caenorhabditis
           elegans
          Length = 418

 Score = 37.1 bits (82), Expect = 0.35
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
           C+YCR +KC++VGM R+A++  R P
Sbjct: 67  CRYCRFEKCLSVGMDRNALQQNRDP 91


>UniRef50_Q23038 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 427

 Score = 37.1 bits (82), Expect = 0.35
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR 419
           N C+ CR KKCIAVGM+ D V++ R
Sbjct: 112 NVCRDCRYKKCIAVGMTTDNVQYNR 136


>UniRef50_A7L5U9 Cluster: Thyroid hormone receptor; n=2;
           Branchiostoma|Rep: Thyroid hormone receptor -
           Branchiostoma floridae (Florida lancelet) (Amphioxus)
          Length = 431

 Score = 37.1 bits (82), Expect = 0.35
 Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = +3

Query: 339 TGNRCQYCRLKKCIAVGMSRDAV--RFGRVPKRE 434
           T N+CQ CR KKC+ VGM+ D V     RV KR+
Sbjct: 102 TRNQCQECRFKKCVRVGMATDLVLDEQKRVAKRK 135


>UniRef50_Q17771 Cluster: Nuclear hormone receptor family member
           nhr-35; n=4; Caenorhabditis|Rep: Nuclear hormone
           receptor family member nhr-35 - Caenorhabditis elegans
          Length = 542

 Score = 37.1 bits (82), Expect = 0.35
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGR--VPKREKARILAAMQQSSSSRAHEQAAAAELDDA-P 521
           C+YCR  KCI+ GM  D V+  R  + KREK   +    Q  + R   +   + ++D   
Sbjct: 129 CRYCRFMKCISSGMRDDQVQSERDVIGKREKKDNMKTYCQDPTPRTSPELTMSPVEDEYD 188

Query: 522 RLLARVVRAHL 554
           +LL  ++++ +
Sbjct: 189 QLLESLLKSEM 199


>UniRef50_UPI0000E4834A Cluster: PREDICTED: similar to hormone
           receptor beta subunit; TRbeta1; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to hormone receptor
           beta subunit; TRbeta1 - Strongylocentrotus purpuratus
          Length = 423

 Score = 36.7 bits (81), Expect = 0.46
 Identities = 20/51 (39%), Positives = 28/51 (54%)
 Frame = +3

Query: 339 TGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           T N+CQ CR KKC+ VGM+ D V      K ++A I    Q++   R  E+
Sbjct: 125 TRNQCQQCRYKKCLNVGMAPDLVLNESQRKAKRALI----QENREKRGREE 171


>UniRef50_Q7QCB4 Cluster: ENSANGP00000002992; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000002992 - Anopheles gambiae
           str. PEST
          Length = 284

 Score = 36.7 bits (81), Expect = 0.46
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
           N+CQ+CRL+KC+ +GM R+  R       + +R+
Sbjct: 31  NQCQFCRLRKCLKMGMRREVSRTNSSSTNKTSRL 64


>UniRef50_A7SBF2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 378

 Score = 36.7 bits (81), Expect = 0.46
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           NRCQ CR  KC+  GM ++AV+  R P
Sbjct: 63  NRCQKCRFVKCLTAGMKKEAVQCERKP 89


>UniRef50_P79926 Cluster: Hepatocyte nuclear factor 4-beta; n=7;
           Euteleostomi|Rep: Hepatocyte nuclear factor 4-beta -
           Xenopus laevis (African clawed frog)
          Length = 446

 Score = 36.7 bits (81), Expect = 0.46
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRL+KC   GM ++AV+
Sbjct: 100 NQCRYCRLRKCFRAGMKKEAVQ 121


>UniRef50_UPI000155BF1B Cluster: PREDICTED: similar to hepatocyte
           nuclear factor 4, gamma; n=1; Ornithorhynchus
           anatinus|Rep: PREDICTED: similar to hepatocyte nuclear
           factor 4, gamma - Ornithorhynchus anatinus
          Length = 470

 Score = 36.3 bits (80), Expect = 0.61
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C++CRLKKC   GM ++AV+
Sbjct: 115 NQCRFCRLKKCFRAGMKKEAVQ 136


>UniRef50_UPI00015A41AD Cluster: UPI00015A41AD related cluster; n=1;
           Danio rerio|Rep: UPI00015A41AD UniRef100 entry - Danio
           rerio
          Length = 468

 Score = 36.3 bits (80), Expect = 0.61
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRL+KC   GM ++AV+
Sbjct: 113 NQCRYCRLRKCFRAGMRKEAVQ 134


>UniRef50_Q966H7 Cluster: Putative uncharacterized protein; n=3;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 431

 Score = 36.3 bits (80), Expect = 0.61
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQ 461
           C+ CRL++C  +GM  D  +F R P ++K  + AA++
Sbjct: 87  CKKCRLQRCFDIGMKIDNFQFERDPYKQKLEMQAALK 123


>UniRef50_Q29PL1 Cluster: GA21482-PA; n=1; Drosophila
           pseudoobscura|Rep: GA21482-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 658

 Score = 36.3 bits (80), Expect = 0.61
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           N+C+ CRL KC    M++DAV+  R P++ K
Sbjct: 65  NQCRACRLAKCFQSAMNKDAVQHERGPRKPK 95


>UniRef50_Q17589 Cluster: Putative uncharacterized protein nhr-17;
           n=2; Caenorhabditis|Rep: Putative uncharacterized
           protein nhr-17 - Caenorhabditis elegans
          Length = 396

 Score = 36.3 bits (80), Expect = 0.61
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS 467
           C++CR KKCI  GM R  +   R  KR+K   L   ++S
Sbjct: 83  CRHCRYKKCIIAGMDRGELSMERRRKRKKLNGLEGSEES 121


>UniRef50_O96680 Cluster: Dissatisfaction; n=2; Drosophila
           melanogaster|Rep: Dissatisfaction - Drosophila
           melanogaster (Fruit fly)
          Length = 693

 Score = 36.3 bits (80), Expect = 0.61
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           N+C+ CRL KC    M++DAV+  R P++ K
Sbjct: 67  NQCRACRLAKCFQSAMNKDAVQHERGPRKPK 97


>UniRef50_O45910 Cluster: Putative uncharacterized protein nhr-231;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein nhr-231 - Caenorhabditis elegans
          Length = 397

 Score = 36.3 bits (80), Expect = 0.61
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +3

Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKA 440
           NR+Y      + S     G     C++CR KKCI +GM+ D VR   + ++E A
Sbjct: 48  NRKYKCA---QKSGKCDVGAEKATCKFCRYKKCIDLGMTTDNVRAEDITEQEPA 98


>UniRef50_O16884 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 391

 Score = 36.3 bits (80), Expect = 0.61
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = +3

Query: 306 RRTSSVVSSGLTGNRCQYCRLKKCI-AVGMSRDAVRFGRVPKREKARILAAMQQSSSSR 479
           +R S  +SS    + C+ CR ++CI   GMSRD V+  R  KR    +LA        R
Sbjct: 51  KRDSDCISSPELRSICRACRYQRCIDTAGMSRDLVQQRRSEKRTPKYVLALRNGGEDER 109


>UniRef50_A7MAD6 Cluster: PNR-like; n=2; Aedes aegypti|Rep: PNR-like
           - Aedes aegypti (Yellowfever mosquito)
          Length = 422

 Score = 36.3 bits (80), Expect = 0.61
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503
           N+CQ CR  KC+   M R+AV+  R P+      LAAM   + S  +   A A
Sbjct: 66  NQCQACRFAKCLQANMRREAVQHERAPR--NCAPLAAMNGINPSDFYPSRAFA 116


>UniRef50_Q9BJK5 Cluster: Nuclear hormone receptor family member
           nhr-97; n=3; Caenorhabditis|Rep: Nuclear hormone
           receptor family member nhr-97 - Caenorhabditis elegans
          Length = 439

 Score = 36.3 bits (80), Expect = 0.61
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR-VPKREKAR 443
           N C+YCR  +C+ VGM  +AV+  R + KR+K +
Sbjct: 86  NACRYCRFHRCLFVGMKIEAVKMDRKLTKRKKEK 119


>UniRef50_Q17370 Cluster: Nuclear hormone receptor family member
           nhr-47; n=2; Caenorhabditis|Rep: Nuclear hormone
           receptor family member nhr-47 - Caenorhabditis elegans
          Length = 579

 Score = 36.3 bits (80), Expect = 0.61
 Identities = 12/23 (52%), Positives = 20/23 (86%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGR 419
           C+YCRL+KC+AVGM +++++  R
Sbjct: 63  CRYCRLQKCLAVGMDKNSIQNDR 85


>UniRef50_UPI00015B458D Cluster: PREDICTED: similar to GA10225-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA10225-PA - Nasonia vitripennis
          Length = 1166

 Score = 35.9 bits (79), Expect = 0.80
 Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK-REKA 440
           N C +CRLKKC AV M+  AV+  R P+ R KA
Sbjct: 62  NWCPHCRLKKCFAVSMNTAAVQEERGPRSRSKA 94


>UniRef50_A5WYG8 Cluster: Pregnane X receptor; n=5; Danio rerio|Rep:
           Pregnane X receptor - Danio rerio (Zebrafish)
           (Brachydanio rerio)
          Length = 430

 Score = 35.9 bits (79), Expect = 0.80
 Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
 Frame = +3

Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSS--SSRAHE 488
           S+ V +     +CQ CRL+KC+++GM R+ +      ++ + +I     Q    +    +
Sbjct: 86  SACVITKSNRRQCQSCRLQKCLSIGMKRELIMSDEAVEKRRLQIRRKRMQEEPVTLTPQQ 145

Query: 489 QAAAAELDDAPRLLARVVRAH 551
           +A   EL +A +    +  AH
Sbjct: 146 EAVIQELLNAHKKTFDMTCAH 166


>UniRef50_Q95XH8 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 347

 Score = 35.9 bits (79), Expect = 0.80
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
 Frame = +3

Query: 339 TGNRCQYCRLKKCIAVGMSRDAVR----FG-RVPKREKARILAAMQQSSSSRAHEQAAAA 503
           T N C+ CRL+KC+ VGM+ +A++     G R PK  K R+  A   S S       +  
Sbjct: 69  TRNTCRACRLQKCLNVGMNPNAIQRRDEIGPRKPKVSKHRLTCAQNFSFSGETQNNFSQK 128

Query: 504 ELDDA 518
           + + A
Sbjct: 129 QYNAA 133


>UniRef50_Q7PQN6 Cluster: ENSANGP00000012911; n=2; Culicidae|Rep:
           ENSANGP00000012911 - Anopheles gambiae str. PEST
          Length = 714

 Score = 35.9 bits (79), Expect = 0.80
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV--RFGRVPKREKARILAAMQQSSSSRAHEQAAA 500
           +T   CQ CRL+KC  +GM ++ +     +V KR+K     A ++ S+  A E +A+
Sbjct: 58  VTRRFCQKCRLEKCFRIGMKKEYIMSEEDKVLKRKKIEQNRAKKRQSNGSASEGSAS 114


>UniRef50_Q61KE7 Cluster: Putative uncharacterized protein CBG09399;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG09399 - Caenorhabditis
           briggsae
          Length = 484

 Score = 35.9 bits (79), Expect = 0.80
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR 419
           N C+ CR KKC+AVGM+ D V++ R
Sbjct: 122 NVCRDCRYKKCLAVGMTPDNVQYNR 146


>UniRef50_Q06AL0 Cluster: Estrogen receptor-related receptor; n=1;
           Marisa cornuarietis|Rep: Estrogen receptor-related
           receptor - Marisa cornuarietis
          Length = 424

 Score = 35.9 bits (79), Expect = 0.80
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
           CQ CR +KC+ VGM R+ VR  RV
Sbjct: 141 CQACRFQKCLRVGMLREGVRLDRV 164


>UniRef50_A5Z0M1 Cluster: UNC-55a isoform; n=8; Caenorhabditis|Rep:
           UNC-55a isoform - Caenorhabditis elegans
          Length = 370

 Score = 35.9 bits (79), Expect = 0.80
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+CQYCRL KCI +GM ++  R
Sbjct: 71  NQCQYCRLTKCIRMGMRKEGRR 92


>UniRef50_O18141 Cluster: Nuclear hormone receptor family member
           nhr-79; n=3; Caenorhabditis|Rep: Nuclear hormone
           receptor family member nhr-79 - Caenorhabditis elegans
          Length = 463

 Score = 35.9 bits (79), Expect = 0.80
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443
           C++CRLKKC   GM RD V+  R  K +K +
Sbjct: 61  CRHCRLKKCQKAGMMRDLVQAKREIKSDKGK 91


>UniRef50_Q25604 Cluster: Nuclear hormone receptor-like 1; n=1;
           Onchocerca volvulus|Rep: Nuclear hormone receptor-like 1
           - Onchocerca volvulus
          Length = 367

 Score = 35.9 bits (79), Expect = 0.80
 Identities = 15/30 (50%), Positives = 23/30 (76%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRR++QQKI Y+ C   ++C I +I+R
Sbjct: 56  KGFFRRTVQQKIVYK-CKSIERCEISKISR 84


>UniRef50_UPI000155C258 Cluster: PREDICTED: similar to
           photoreceptor-specific nuclear receptor; n=1;
           Ornithorhynchus anatinus|Rep: PREDICTED: similar to
           photoreceptor-specific nuclear receptor -
           Ornithorhynchus anatinus
          Length = 178

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDA 404
           N+CQ CRL+KC+  GM++DA
Sbjct: 146 NQCQACRLRKCLQAGMNKDA 165


>UniRef50_UPI00015A74A9 Cluster: nuclear receptor subfamily 2, group
           E, member 1; n=1; Danio rerio|Rep: nuclear receptor
           subfamily 2, group E, member 1 - Danio rerio
          Length = 466

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 12/21 (57%), Positives = 18/21 (85%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAV 407
           N+C+ CRLKKC+ V M++DA+
Sbjct: 53  NQCRACRLKKCLEVNMNKDAI 73


>UniRef50_Q617F3 Cluster: Putative uncharacterized protein CBG14996;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG14996 - Caenorhabditis
           briggsae
          Length = 449

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431
           NRC+ CRL+KC +VGM   +V+  R P +
Sbjct: 70  NRCRACRLQKCYSVGMDEKSVQSERHPAK 98


>UniRef50_Q4H3L1 Cluster: Nuclear receptor; n=1; Ciona
           intestinalis|Rep: Nuclear receptor - Ciona intestinalis
           (Transparent sea squirt)
          Length = 515

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
           CQ CR  KC+ VGM R+ VR  RV
Sbjct: 228 CQSCRFSKCLRVGMLREGVRLDRV 251


>UniRef50_Q2TUU6 Cluster: Thyroid hormone receptor beta; n=2;
           Schistosoma mansoni|Rep: Thyroid hormone receptor beta -
           Schistosoma mansoni (Blood fluke)
          Length = 847

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = +3

Query: 324 VSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503
           VS     N CQ CR  +CI+ GM++D V      +  K R++ A +    + A E + A 
Sbjct: 193 VSDKQNRNSCQKCRFDRCISGGMAKDLV-LDEDKRLAKRRLIEANRARKRAEAIEASTAV 251

Query: 504 ELDD 515
            + D
Sbjct: 252 YVTD 255


>UniRef50_Q18392 Cluster: Putative uncharacterized protein C33G8.12;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein C33G8.12 - Caenorhabditis
           elegans
          Length = 358

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +3

Query: 282 RRYNTGPARRTSSVVSSGLTGNR-CQYCRLKKCIAVGMSRDAVRFGRVPKREKARIL 449
           RRY     +  S      L  +  C+YCR+ KC+ +GM +  V+    P REK +IL
Sbjct: 39  RRYVHSTKQEISCTCDQRLISSHPCRYCRMLKCMKIGMCKTQVQ----PPREKNKIL 91


>UniRef50_Q14EL7 Cluster: FTZ-F1-alpha; n=10; Eumetazoa|Rep:
           FTZ-F1-alpha - Schistosoma mansoni (Blood fluke)
          Length = 1892

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC YCR +KC+ VGM  +AVR  R+
Sbjct: 160 RCAYCRFQKCLIVGMRVEAVREDRM 184


>UniRef50_A5JPH1 Cluster: Estrogen receptor; n=1; Branchiostoma
           floridae|Rep: Estrogen receptor - Branchiostoma floridae
           (Florida lancelet) (Amphioxus)
          Length = 491

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFG--RVPKREK 437
           CQ CR +KC+ VGM++D  R G  R P+R++
Sbjct: 136 CQACRYRKCLMVGMTKDGRRSGERRGPRRKR 166


>UniRef50_A1ZA02 Cluster: CG16801-PA, isoform A; n=1; Drosophila
           melanogaster|Rep: CG16801-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 532

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRD 401
           N+CQ CRLKKC+ +GM++D
Sbjct: 280 NQCQACRLKKCLQMGMNKD 298


>UniRef50_O02235 Cluster: Nuclear hormone receptor family member
           nhr-89; n=1; Caenorhabditis elegans|Rep: Nuclear hormone
           receptor family member nhr-89 - Caenorhabditis elegans
          Length = 310

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
 Frame = +3

Query: 222 KETLLNVAVTRRASSGDLYNRRYNTG---PARRTSSVVSSGLTGNRCQYCRLKKCIAVGM 392
           K T  +  +T   S    + R  N     PA  + +++        C+ CR  KC+  GM
Sbjct: 15  KGTRRHFGITACMSCSSFFRRSLNCKFYCPANNSCTILDD--QKQFCRSCRYNKCVQSGM 72

Query: 393 SRDAVR---FGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLAR 536
            RD VR   + R   R++A+  A    +  S ++E+     + +A   +AR
Sbjct: 73  RRDCVRKQSYRRQAGRKEAKSPAVSCSNKLSESYEELLNFYVKEANESIAR 123


>UniRef50_UPI00015B595D Cluster: PREDICTED: similar to CG16801-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           CG16801-PA - Nasonia vitripennis
          Length = 494

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRD 401
           N+CQ CRLKKC+ +GM++D
Sbjct: 230 NQCQACRLKKCMQMGMNKD 248


>UniRef50_UPI0000DC039A Cluster: Steroidogenic factor 1 (STF-1)
           (SF-1) (Adrenal 4-binding protein) (Steroid hormone
           receptor Ad4BP) (Fushi tarazu factor homolog 1).; n=1;
           Rattus norvegicus|Rep: Steroidogenic factor 1 (STF-1)
           (SF-1) (Adrenal 4-binding protein) (Steroid hormone
           receptor Ad4BP) (Fushi tarazu factor homolog 1). -
           Rattus norvegicus
          Length = 331

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC +CR +KC+ VGM  +AVR  R+
Sbjct: 53  RCPFCRFQKCLTVGMRLEAVRADRM 77



 Score = 32.3 bits (70), Expect = 9.9
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q    Y  CT++Q C I +  R+  P    +K
Sbjct: 23  KGFFKRTVQNNKHYT-CTESQSCKIDKTQRKRCPFCRFQK 61


>UniRef50_Q9GTC9 Cluster: Nuclear receptor NHR-88; n=3;
           Caenorhabditis elegans|Rep: Nuclear receptor NHR-88 -
           Caenorhabditis elegans
          Length = 598

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N C+YCR ++C+ VGM  +A+R
Sbjct: 91  NACRYCRFQRCLTVGMEPEAIR 112


>UniRef50_Q7QKA0 Cluster: ENSANGP00000013419; n=3; Culicidae|Rep:
           ENSANGP00000013419 - Anopheles gambiae str. PEST
          Length = 278

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
           N C +CRL+KC  VGM+  AV+  R P++ +  +
Sbjct: 60  NWCPFCRLQKCFLVGMNAAAVQQERGPRKGRKMV 93


>UniRef50_Q61XA5 Cluster: Putative uncharacterized protein CBG04060;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG04060 - Caenorhabditis
           briggsae
          Length = 502

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 14/29 (48%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGR-VPKR 431
           RCQ CR  +C+AVGM++++VR  +  PK+
Sbjct: 303 RCQACRYARCLAVGMNKESVRITKDEPKK 331


>UniRef50_Q61AX8 Cluster: Putative uncharacterized protein CBG13579;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG13579 - Caenorhabditis
           briggsae
          Length = 470

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV--PKREKARILAAMQQ 464
           C+YCRL+KC  VGM   A++   V  P++ K++ +   Q+
Sbjct: 97  CRYCRLQKCFTVGMKASAIQRRDVMGPRKPKSKDIPIKQE 136


>UniRef50_Q4H3G7 Cluster: Nuclear receptor; n=1; Ciona
           intestinalis|Rep: Nuclear receptor - Ciona intestinalis
           (Transparent sea squirt)
          Length = 504

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDA 518
           CQ CR +KC+ VGM  +AVR  RV  R        + +   +R     A +E+ D+
Sbjct: 61  CQACRFQKCLRVGMKLEAVRRDRV--RGGRNKFGPLYKQDRARKQRLKALSEVHDS 114


>UniRef50_Q1RLF6 Cluster: Nuclear receptor; n=2; Ciona
           intestinalis|Rep: Nuclear receptor - Ciona intestinalis
           (Transparent sea squirt)
          Length = 656

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 339 TGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKA 440
           T   C YCR +KC+ VGM ++ VR      R KA
Sbjct: 534 TRTHCPYCRYQKCLRVGMIKNVVRTDPHQSRRKA 567


>UniRef50_A7SVT5 Cluster: Predicted protein; n=2; Actiniaria|Rep:
           Predicted protein - Nematostella vectensis
          Length = 347

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRD 401
           NRCQYCR +KCI  GM ++
Sbjct: 66  NRCQYCRFQKCIQAGMIKE 84


>UniRef50_A7SD88 Cluster: Predicted protein; n=4; Eumetazoa|Rep:
           Predicted protein - Nematostella vectensis
          Length = 340

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           N+CQ CR KKC+ V M+R AV+  R P
Sbjct: 59  NQCQACRFKKCLEVKMNRFAVQQERQP 85


>UniRef50_P18119 Cluster: Thyroid hormone receptor beta-B; n=19;
           Tetrapoda|Rep: Thyroid hormone receptor beta-B - Xenopus
           laevis (African clawed frog)
          Length = 414

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV 407
           +T N+CQ CR KKC  VGM+ D V
Sbjct: 109 VTRNQCQECRFKKCKTVGMATDLV 132


>UniRef50_Q13285 Cluster: Steroidogenic factor 1; n=59;
           Euteleostomi|Rep: Steroidogenic factor 1 - Homo sapiens
           (Human)
          Length = 461

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC +CR +KC+ VGM  +AVR  R+
Sbjct: 64  RCPFCRFQKCLTVGMRLEAVRADRM 88



 Score = 32.3 bits (70), Expect = 9.9
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q    Y  CT++Q C I +  R+  P    +K
Sbjct: 34  KGFFKRTVQNNKHYT-CTESQSCKIDKTQRKRCPFCRFQK 72


>UniRef50_O02151 Cluster: Nuclear hormone receptor family member
           nhr-14; n=3; Caenorhabditis|Rep: Nuclear hormone
           receptor family member nhr-14 - Caenorhabditis elegans
          Length = 435

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 18/61 (29%), Positives = 33/61 (54%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           N C+YCR +KC+A GM  +A+      + E+ RI +  ++  S    E  + +E   +P+
Sbjct: 70  NACRYCRFQKCLADGMKPEAI------QNERDRIGSTKRRKRSGANSENNSDSEGTPSPK 123

Query: 525 L 527
           +
Sbjct: 124 I 124



 Score = 33.9 bits (74), Expect = 3.2
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRES 349
           +GFFRRS+ Q +QY  C  N+QC+I + +R +
Sbjct: 41  KGFFRRSVWQNLQY-TCRFNKQCNIDKDHRNA 71


>UniRef50_P41999 Cluster: Nuclear hormone receptor family member
           nhr-10; n=9; Caenorhabditis|Rep: Nuclear hormone
           receptor family member nhr-10 - Caenorhabditis elegans
          Length = 395

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
           C++CR +KC+ VGM R+A++  R P
Sbjct: 70  CRHCRFEKCLQVGMDRNAIQQNRDP 94


>UniRef50_Q6Q6F3 Cluster: Estrogen-related receptor delta; n=3;
           Danio rerio|Rep: Estrogen-related receptor delta - Danio
           rerio (Zebrafish) (Brachydanio rerio)
          Length = 344

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
           CQ CR +KC+  GM R+ VR  RV
Sbjct: 66  CQACRFQKCLRAGMMREGVRMDRV 89


>UniRef50_O42550 Cluster: PPARG; n=12; Clupeocephala|Rep: PPARG -
           Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 44

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMS 395
           N+CQYCR +KC  VGMS
Sbjct: 28  NKCQYCRFQKCFPVGMS 44


>UniRef50_Q9VI12 Cluster: CG10296-PA; n=2; Sophophora|Rep:
           CG10296-PA - Drosophila melanogaster (Fruit fly)
          Length = 278

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           N C  CR ++C+AVGM+  AV+  R P+ ++   +A  +         QAA +    +  
Sbjct: 58  NWCPSCRFQRCLAVGMNAAAVQEERGPRNQQ---VALYRTGRRQAPPSQAAPSPTPHSQA 114

Query: 525 LLARVVRAHLDTC 563
           L  +++   L TC
Sbjct: 115 LHFQILAQILVTC 127


>UniRef50_Q9GTG3 Cluster: Nuclear receptor NHR-50; n=2;
           Caenorhabditis elegans|Rep: Nuclear receptor NHR-50 -
           Caenorhabditis elegans
          Length = 116

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGR---VPKREKARILAAMQQSSSS 476
           C+ CR+KKC+++GM+ + V+  R    PK+ K   ++    SSSS
Sbjct: 52  CRECRIKKCLSIGMNPEKVQEKRERHPPKKNKPPSISEALTSSSS 96


>UniRef50_Q95YJ6 Cluster: Nuclear receptor 1; n=1; Ciona
           savignyi|Rep: Nuclear receptor 1 - Ciona savignyi
           (Pacific transparent sea squirt)
          Length = 600

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAV 407
           N+CQ CR KKCI  GM+ D V
Sbjct: 97  NQCQLCRYKKCITTGMATDLV 117


>UniRef50_Q61R49 Cluster: Putative uncharacterized protein CBG06732;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG06732 - Caenorhabditis
           briggsae
          Length = 303

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPK 428
           RCQ CR KKCI VGM+  A+      K
Sbjct: 63  RCQSCRFKKCIEVGMNSKALELNETEK 89


>UniRef50_Q21700 Cluster: Putative uncharacterized protein nhr-205;
           n=2; Caenorhabditis|Rep: Putative uncharacterized
           protein nhr-205 - Caenorhabditis elegans
          Length = 387

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGR-VPKREKARILAAMQQS 467
           C+ CRL KC+ +GM R  V+  R  P++E+  IL +M  S
Sbjct: 75  CKSCRLNKCLNLGMKRSCVQPRRDKPQKEEKLILPSMNVS 114


>UniRef50_Q1RL97 Cluster: Nuclear receptor; n=2; Ciona
           intestinalis|Rep: Nuclear receptor - Ciona intestinalis
           (Transparent sea squirt)
          Length = 391

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
           CQ CR   C+A GM+   +      +  K R L  M +  S     QA    +D+   L+
Sbjct: 43  CQACRFNACLAAGMNSSLILSDE--EVNKKRDLIRMNREKSGSKQPQATRMTMDE-KLLV 99

Query: 531 ARVVRAHLDTCEF 569
             +++ H D+ +F
Sbjct: 100 KTLLKGHRDSYDF 112


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,643,967
Number of Sequences: 1657284
Number of extensions: 9356456
Number of successful extensions: 34485
Number of sequences better than 10.0: 309
Number of HSP's better than 10.0 without gapping: 32856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34452
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -