Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0965
         (629 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457566-1|AAL68796.1|  147|Anopheles gambiae multiprotein bridg...    26   1.1  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   3.5  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   6.1  
AY146742-1|AAO12102.1|  154|Anopheles gambiae odorant-binding pr...    23   8.0  
AF437890-1|AAL84185.1|  154|Anopheles gambiae odorant binding pr...    23   8.0  

>AF457566-1|AAL68796.1|  147|Anopheles gambiae multiprotein bridging
           factor-like proteinprotein.
          Length = 147

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 13/56 (23%), Positives = 27/56 (48%)
 Frame = +2

Query: 272 SIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCAIRSCTQTRES 439
           ++ +K   +  T   + +I +  R+ +PV  T+K +   N+Q   A  +    RE+
Sbjct: 10  TVLRKKAPKAATLKTESAINKARRQGIPVETTQKFNAGTNKQHVAAKNTAKLDRET 65


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 237 NVAVTRRASSGDLYNRRYNT 296
           NV++ R ASSG+L N  + T
Sbjct: 312 NVSMPRNASSGELQNGEHKT 331


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
 Frame = +2

Query: 302 CTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCAIRSCTQTRESAYPR---SDATVVV 472
           CT  ++  I  + RE+VP+    K   R       AIRS    + +  PR   +D    +
Sbjct: 7   CTPEERKDIQGLYRENVPIKTICKAFGRSRSFVDNAIRSEATGKSTGRPRKTTADVDARI 66

Query: 473 VSCTRA 490
           V   RA
Sbjct: 67  VEMIRA 72


>AY146742-1|AAO12102.1|  154|Anopheles gambiae odorant-binding
           protein AgamOBP7 protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 588 SDAITRETRTCRDERAPLAPATE 520
           S A   + RTC D   P APA +
Sbjct: 52  SGASEEQLRTCLDGTVPTAPAAK 74


>AF437890-1|AAL84185.1|  154|Anopheles gambiae odorant binding
           protein protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 588 SDAITRETRTCRDERAPLAPATE 520
           S A   + RTC D   P APA +
Sbjct: 52  SGASEEQLRTCLDGTVPTAPAAK 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,435
Number of Sequences: 2352
Number of extensions: 10461
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)