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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0965
         (629 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72631-1|CAB53540.1|  614|Homo sapiens Rev-ErbAalpha protein pro...    77   4e-14
M24898-1|AAA52335.1|  614|Homo sapiens triiodothyronine receptor...    77   4e-14
BC056148-1|AAH56148.1|  614|Homo sapiens nuclear receptor subfam...    77   4e-14
BC047875-1|AAH47875.1|  614|Homo sapiens nuclear receptor subfam...    77   4e-14
L31785-1|AAA65937.1|  579|Homo sapiens orphan nuclear hormone re...    73   6e-13
D16815-1|BAA20088.1|  579|Homo sapiens EAR-1r protein.                 73   6e-13
CR457434-1|CAG33715.1|  579|Homo sapiens NR1D2 protein.                73   6e-13
BC070035-1|AAH70035.1|  408|Homo sapiens NR1D2 protein protein.        73   6e-13
BC045613-1|AAH45613.1|  579|Homo sapiens nuclear receptor subfam...    73   6e-13
AB209091-1|BAD92328.1|  549|Homo sapiens Orphan nuclear receptor...    73   6e-13
L07592-1|AAA36469.1|  441|Homo sapiens peroxisome proliferator a...    64   4e-10
BC007578-1|AAH07578.1|  361|Homo sapiens PPARD protein protein.        64   4e-10
BC002715-1|AAH02715.1|  361|Homo sapiens PPARD protein protein.        64   4e-10
AY919140-1|AAX14041.1|  441|Homo sapiens peroxisome proliferator...    64   4e-10
AY442342-1|AAR05439.1|  441|Homo sapiens peroxisome proliferativ...    64   4e-10
AL022721-9|CAD92505.1|  361|Homo sapiens peroxisome proliferativ...    64   4e-10
AL022721-8|CAB38629.1|  441|Homo sapiens peroxisome proliferativ...    64   4e-10
AF246303-1|AAF62553.1|  441|Homo sapiens peroxisome proliferativ...    64   4e-10
U16997-1|AAA64751.1|  560|Homo sapiens ROR gamma protein.              63   9e-10
CR457436-1|CAG33717.1|  518|Homo sapiens RORC protein.                 63   9e-10
BC110571-1|AAI10572.1|  518|Homo sapiens RAR-related orphan rece...    63   9e-10
BC031554-1|AAH31554.1|  518|Homo sapiens RAR-related orphan rece...    63   9e-10
AL589765-18|CAI17180.1|  518|Homo sapiens RAR-related orphan rec...    63   9e-10
AL589765-17|CAI17179.1|  497|Homo sapiens RAR-related orphan rec...    63   9e-10
AK223137-1|BAD96857.1|  518|Homo sapiens RAR-related orphan rece...    63   9e-10
U04899-1|AAA62660.1|  548|Homo sapiens RORalpha3 protein.              62   1e-09
U04898-1|AAA62659.1|  556|Homo sapiens RORalpha2 protein.              62   1e-09
U04897-1|AAA62658.1|  523|Homo sapiens RORalpha1 protein.              62   1e-09
L14611-1|AAA02963.1|  468|Homo sapiens transcription factor prot...    62   1e-09
BC100990-1|AAI00991.1|  468|Homo sapiens RAR-related orphan rece...    62   1e-09
BC100989-1|AAI00990.1|  468|Homo sapiens RAR-related orphan rece...    62   1e-09
BC100988-1|AAI00989.1|  468|Homo sapiens RAR-related orphan rece...    62   1e-09
BC100987-1|AAI00988.1|  468|Homo sapiens RAR-related orphan rece...    62   1e-09
BC008831-1|AAH08831.1|  523|Homo sapiens RAR-related orphan rece...    62   1e-09
Y08639-1|CAA69929.1|  459|Homo sapiens nuclear orphan receptor R...    62   2e-09
X90563-2|CAA62153.1|  475|Homo sapiens peroxisome proliferator a...    62   2e-09
X90563-1|CAA62152.1|  477|Homo sapiens peroxisome proliferator a...    62   2e-09
U79012-1|AAC51248.1|  505|Homo sapiens ligand activated transcri...    62   2e-09
U63415-1|AAB04028.1|  505|Homo sapiens peroxisome proliferator a...    62   2e-09
L40904-1|AAA80314.2|  477|Homo sapiens peroxisome proliferator a...    62   2e-09
BT007281-1|AAP35945.1|  477|Homo sapiens peroxisome proliferativ...    62   2e-09
BC006811-1|AAH06811.1|  477|Homo sapiens peroxisome proliferator...    62   2e-09
AY222643-1|AAO66458.1|  584|Homo sapiens CREB3L2-PPARgamma protein.    62   2e-09
AY157024-1|AAN38992.2|  475|Homo sapiens peroxisome proliferativ...    62   2e-09
AK223528-1|BAD97248.1|  478|Homo sapiens peroxisome proliferativ...    62   2e-09
AJ698135-1|CAG29019.1|  248|Homo sapiens peroxisome proliferativ...    62   2e-09
AJ563370-1|CAD91389.1|  264|Homo sapiens peroxisome proliferativ...    62   2e-09
AJ563369-1|CAD91388.1|  280|Homo sapiens peroxisome proliferativ...    62   2e-09
AB005526-1|BAA23354.1|  474|Homo sapiens peroxisome proliferator...    62   2e-09
BC093774-1|AAH93774.1|  459|Homo sapiens RAR-related orphan rece...    61   4e-09
BC093772-1|AAH93772.1|  459|Homo sapiens RAR-related orphan rece...    61   4e-09
BC051830-1|AAH51830.1|  459|Homo sapiens RAR-related orphan rece...    61   4e-09
AL355674-1|CAD13280.2|  459|Homo sapiens RAR-related orphan rece...    61   4e-09
AL137018-1|CAD13276.2|  459|Homo sapiens RAR-related orphan rece...    61   4e-09
AB099507-1|BAC78903.1|  161|Homo sapiens peroxisome proliferativ...    60   8e-09
Y07619-1|CAA68898.1|  468|Homo sapiens peroxisome proliferator-a...    59   1e-08
S74349-1|AAB32649.1|  468|Homo sapiens peroxisome proliferator a...    59   1e-08
L02932-1|AAA36468.1|  468|Homo sapiens peroxisome proliferator a...    59   1e-08
D83233-1|BAA18949.1|  506|Homo sapiens PPAR gamma2 protein.            59   1e-08
CR457435-1|CAG33716.1|  468|Homo sapiens PPARA protein.                59   1e-08
CR456547-1|CAG30433.1|  468|Homo sapiens PPARA protein.                59   1e-08
BC000052-1|AAH00052.1|  258|Homo sapiens peroxisome proliferator...    59   1e-08
AY206718-1|AAO13489.1|  468|Homo sapiens peroxisome proliferativ...    59   1e-08
AL078611-2|CAI18764.1|  468|Homo sapiens peroxisome proliferativ...    59   1e-08
AL049856-1|CAI22450.1|  468|Homo sapiens peroxisome proliferativ...    59   1e-08
Y00291-1|CAA68398.1|  448|Homo sapiens protein ( Human hap mRNA ...    52   1e-06
X07282-1|CAA30262.1|  448|Homo sapiens protein ( Human mRNA for ...    52   1e-06
DQ083391-1|AAZ32403.1|  184|Homo sapiens retinoic acid receptor ...    52   1e-06
CR536558-1|CAG38795.1|  336|Homo sapiens RARB protein.                 52   1e-06
BC060794-1|AAH60794.1|  448|Homo sapiens retinoic acid receptor,...    52   1e-06
BC050415-1|AAH50415.2|  346|Homo sapiens RARB protein protein.         52   1e-06
AY501390-1|AAS85757.1|  336|Homo sapiens retinoic acid receptor ...    52   1e-06
AF157483-1|AAD45688.1|  336|Homo sapiens retinoic acid receptor ...    52   1e-06
X12794-1|CAA31282.1|  403|Homo sapiens protein ( Human v-erbA re...    51   3e-06
M57707-1|AAA63254.1|  454|Homo sapiens retinoic acid receptor-ga...    51   3e-06
M38258-1|AAA60254.1|  454|Homo sapiens retinoic acid receptor-ga...    51   3e-06
M24857-1|AAA52692.1|  454|Homo sapiens RARG protein.                   51   3e-06
BC093729-1|AAH93729.1|  454|Homo sapiens retinoic acid receptor,...    51   3e-06
BC093727-1|AAH93727.1|  454|Homo sapiens retinoic acid receptor,...    51   3e-06
BC084544-1|AAH84544.2|  404|Homo sapiens nuclear receptor subfam...    51   3e-06
BC063018-1|AAH63018.2|  404|Homo sapiens nuclear receptor subfam...    51   3e-06
BC002669-1|AAH02669.3|  404|Homo sapiens nuclear receptor subfam...    51   3e-06
AJ250835-1|CAB60726.1|  381|Homo sapiens retinoic acid receptor ...    51   3e-06
AY013703-1|AAG41594.2|   58|Homo sapiens retinoic acid receptor ...    50   5e-06
U60477-1|AAB09475.1|  414|Homo sapiens apoliprotein AI regulator...    50   9e-06
M64497-1|AAA86429.1|  414|Homo sapiens apolipoprotein AI regulat...    50   9e-06
M62760-1|AAA21479.1|  351|Homo sapiens ovalbumin upstream promot...    50   9e-06
BC042897-1|AAH42897.1|  414|Homo sapiens nuclear receptor subfam...    50   9e-06
BC014664-1|AAH14664.1|  414|Homo sapiens nuclear receptor subfam...    50   9e-06
X16155-1|CAA34277.1|  418|Homo sapiens COUP-TF protein.                49   1e-05
X12795-1|CAA31283.1|  423|Homo sapiens protein ( Human v-erbA re...    49   1e-05
BC017493-1|AAH17493.1|  423|Homo sapiens nuclear receptor subfam...    49   1e-05
BC004154-1|AAH04154.1|  423|Homo sapiens nuclear receptor subfam...    49   1e-05
X06614-1|CAA29829.1|  462|Homo sapiens protein ( Human mRNA for ...    49   2e-05
X06538-1|CAA29787.1|  432|Homo sapiens protein ( Human mRNA for ...    49   2e-05
U41743-1|AAB00113.1|  520|Homo sapiens nucleophosmin-retinoic ac...    49   2e-05
U41742-1|AAB00112.1|  563|Homo sapiens nucleophosmin-retinoic ac...    49   2e-05
S50916-1|AAB19602.2|  416|Homo sapiens retinoic acid receptor al...    49   2e-05
M73779-1|AAA60126.1|  797|Homo sapiens PML-RAR protein protein.        49   2e-05
CR457438-1|CAG33719.1|  462|Homo sapiens RARA protein.                 49   2e-05
BC071733-1|AAH71733.1|  457|Homo sapiens retinoic acid receptor,...    49   2e-05
BC008727-1|AAH08727.1|  462|Homo sapiens retinoic acid receptor,...    49   2e-05
AF088895-1|AAD05222.1|  462|Homo sapiens retinoic acid receptor ...    49   2e-05
AF012304-1|AAC33511.1|  194|Homo sapiens nuclear mitotic apparat...    49   2e-05
U38480-1|AAA80681.1|  463|Homo sapiens retinoid X receptor-gamma...    46   1e-04
CR456705-1|CAG32986.1|  463|Homo sapiens RXRG protein.                 46   1e-04
BC041421-1|AAH41421.1|  322|Homo sapiens NR2E3 protein protein.        46   1e-04
BC012063-1|AAH12063.1|  463|Homo sapiens retinoid X receptor, ga...    46   1e-04
AL160058-2|CAC00596.1|  463|Homo sapiens retinoid X receptor, ga...    46   1e-04
AJ276674-1|CAB82769.1|  410|Homo sapiens photoreceptor-specific ...    46   1e-04
AF148128-1|AAF22227.1|  367|Homo sapiens nuclear receptor protein.     46   1e-04
AF121129-1|AAD28301.1|  410|Homo sapiens photoreceptor-specific ...    46   1e-04
M29960-1|AAA36761.1|  603|Homo sapiens protein ( Human steroid r...    46   1e-04
M29959-1|AAA36762.1|  467|Homo sapiens protein ( Human steroid r...    46   1e-04
M21985-1|AAA36650.1|  483|Homo sapiens protein ( Human steroid r...    46   1e-04
BC040141-1|AAH40141.1|  467|Homo sapiens nuclear receptor subfam...    46   1e-04
X52773-1|CAA36982.1|  462|Homo sapiens protein ( Human mRNA for ...    44   4e-04
DQ303444-1|ABB96254.1|  452|Homo sapiens retinoid X receptor, al...    44   4e-04
BC110998-1|AAI10999.1|  462|Homo sapiens retinoid X receptor, al...    44   4e-04
BC063827-1|AAH63827.1|  516|Homo sapiens RXRA protein protein.         44   4e-04
AL669970-1|CAM45733.1|  462|Homo sapiens retinoid X receptor, al...    44   4e-04
AL354796-1|CAH70571.1|  462|Homo sapiens retinoid X receptor, al...    44   4e-04
U80802-1|AAB96828.1|  480|Homo sapiens orphan nuclear receptor G...    44   6e-04
U64876-1|AAB06335.1|  480|Homo sapiens nuclear orphan receptor p...    44   6e-04
S83309-1|AAB50876.1|  476|Homo sapiens germ cell nuclear factor ...    44   6e-04
BC030600-1|AAH30600.1|  475|Homo sapiens nuclear receptor subfam...    44   6e-04
AL354979-4|CAI10960.1|  479|Homo sapiens nuclear receptor subfam...    44   6e-04
AL354928-2|CAI39633.1|  479|Homo sapiens nuclear receptor subfam...    44   6e-04
AL158075-1|CAI13577.1|  479|Homo sapiens nuclear receptor subfam...    44   6e-04
AF004291-1|AAC52054.1|  454|Homo sapiens germ cell nuclear facto...    44   6e-04
X63522-1|CAA45087.1|  533|Homo sapiens retinoic acid X receptor ...    43   0.001
M84820-1|AAA60293.1|  533|Homo sapiens retinoid X receptor beta ...    43   0.001
BT007280-1|AAP35944.1|  533|Homo sapiens retinoid X receptor, be...    43   0.001
BC001167-1|AAH01167.1|  533|Homo sapiens retinoid X receptor, be...    43   0.001
AL844527-9|CAI41836.2|  537|Homo sapiens retinoid X receptor, be...    43   0.001
AL844527-8|CAI41837.1|  533|Homo sapiens retinoid X receptor, be...    43   0.001
AL662824-21|CAI17612.2|  537|Homo sapiens retinoid X receptor, b...    43   0.001
AL662824-20|CAI17614.1|  533|Homo sapiens retinoid X receptor, b...    43   0.001
AL645940-7|CAI18064.2|  537|Homo sapiens retinoid X receptor, be...    43   0.001
AL645940-6|CAI18066.1|  533|Homo sapiens retinoid X receptor, be...    43   0.001
AL031228-14|CAI95622.1|  482|Homo sapiens retinoid X receptor, b...    43   0.001
AL031228-13|CAA20239.1|  533|Homo sapiens retinoid X receptor, b...    43   0.001
AL031228-12|CAI95621.1|  262|Homo sapiens retinoid X receptor, b...    43   0.001
AF120161-1|AAD13794.1|  533|Homo sapiens retinoic X receptor bet...    43   0.001
AF065396-1|AAC18599.1|  533|Homo sapiens retinoic X receptor B p...    43   0.001
AB209244-1|BAD92481.1|  577|Homo sapiens retinoid X receptor, be...    43   0.001
X99975-1|CAA68236.1|  480|Homo sapiens hRTR/hGCNF protein protein.     42   0.002
X75918-1|CAA53518.1|  598|Homo sapiens NOT protein.                    42   0.002
U10990-1|AAC50118.1|  596|Homo sapiens hTAK1 protein.                  42   0.002
S77154-1|AAB33999.1|  535|Homo sapiens TINUR protein.                  42   0.002
L27586-1|AAA21474.1|  615|Homo sapiens TR4 orphan receptor protein.    42   0.002
BC066890-1|AAH66890.1|  535|Homo sapiens nuclear receptor subfam...    42   0.002
BC051670-1|AAH51670.1|  530|Homo sapiens NR2C2 protein protein.        42   0.002
BC009288-1|AAH09288.1|  598|Homo sapiens nuclear receptor subfam...    42   0.002
AK223625-1|BAD97345.1|  598|Homo sapiens nuclear receptor subfam...    42   0.002
AC074099-1|AAY24203.1|  598|Homo sapiens unknown protein.              42   0.002
AB019433-1|BAA77328.1|  598|Homo sapiens T-cell nuclear receptor...    42   0.002
AB017586-1|BAA75666.1|  598|Homo sapiens Nurr1 protein.                42   0.002
Y13276-1|CAA73725.1|  385|Homo sapiens Tailless protein protein.       42   0.002
X89894-1|CAA61984.1|  443|Homo sapiens nuclear receptor protein.       42   0.002
U12767-1|AAB02581.1|  587|Homo sapiens mitogen induced nuclear o...    42   0.002
S81243-1|AAB36006.1|  684|Homo sapiens CHN protein.                    42   0.002
D85242-1|BAA31221.1|  143|Homo sapiens NOR-1 3'-variant protein.       42   0.002
D78579-1|BAA11419.1|  626|Homo sapiens neuron derived orphan rec...    42   0.002
D49728-1|BAA08565.1|  598|Homo sapiens DNA binding protein protein.    42   0.002
BT007144-1|AAP35808.1|  598|Homo sapiens nuclear receptor subfam...    42   0.002
BC028031-1|AAH28031.1|  385|Homo sapiens nuclear receptor subfam...    42   0.002
BC016147-1|AAH16147.1|  598|Homo sapiens nuclear receptor subfam...    42   0.002
AL359710-3|CAI95139.1|  443|Homo sapiens nuclear receptor subfam...    42   0.002
AL359710-2|CAI95138.1|  626|Homo sapiens nuclear receptor subfam...    42   0.002
AL359710-1|CAM16648.1|  637|Homo sapiens nuclear receptor subfam...    42   0.002
AL358937-4|CAI95320.1|  626|Homo sapiens nuclear receptor subfam...    42   0.002
AL358937-3|CAM22558.1|  637|Homo sapiens nuclear receptor subfam...    42   0.002
AL078596-2|CAO03480.1|  422|Homo sapiens nuclear receptor subfam...    42   0.002
AL078596-1|CAB75626.1|  385|Homo sapiens nuclear receptor subfam...    42   0.002
AK131566-1|BAD18699.1|  652|Homo sapiens protein ( Homo sapiens ...    42   0.002
AK131541-1|BAD18677.1|  422|Homo sapiens protein ( Homo sapiens ...    42   0.002
AF411525-1|AAL05871.1|  385|Homo sapiens nuclear receptor subfam...    42   0.002
AF220532-1|AAG31945.1|  385|Homo sapiens orphan nuclear receptor...    42   0.002
X55074-2|CAB57886.1|  490|Homo sapiens thyroid hormone receptor ...    41   0.003
X55074-1|CAA38899.1|  410|Homo sapiens thyroid hormone receptor ...    41   0.003
X55005-1|CAA38749.1|  410|Homo sapiens thyriod hormone receptor ...    41   0.003
M24899-1|AAA35783.1|  490|Homo sapiens triiodothyronine receptor...    41   0.003
M24748-2|AAA66021.1|  410|Homo sapiens thyroid receptor alpha-1 ...    41   0.003
L13740-1|AAA36763.1|  598|Homo sapiens TR3 orphan receptor protein.    41   0.003
J03239-1|AAA61176.1|  490|Homo sapiens thyroid hormone receptor ...    41   0.003
CR541915-1|CAG46713.1|  410|Homo sapiens THRA protein.                 41   0.003
BC035137-1|AAH35137.1|  451|Homo sapiens THRA protein protein.         41   0.003
BC008851-1|AAH08851.1|  410|Homo sapiens THRA protein protein.         41   0.003
BC002728-1|AAH02728.1|  490|Homo sapiens thyroid hormone recepto...    41   0.003
BC000261-1|AAH00261.1|  490|Homo sapiens thyroid hormone recepto...    41   0.003
AB209346-1|BAD92583.1|  397|Homo sapiens thyroid hormone recepto...    41   0.003
CR456704-1|CAG32985.1|  598|Homo sapiens NR4A1 protein.                40   0.006
Y00479-1|CAA68539.1|  490|Homo sapiens protein ( H.sapiens mRNA ...    39   0.017
X04707-1|CAA28412.1|  456|Homo sapiens put.thyroid hormone recep...    38   0.022
M26747-1|AAA35677.1|  456|Homo sapiens c-erbA protein.                 38   0.022
BC106930-1|AAI06931.1|  461|Homo sapiens THRB protein protein.         38   0.022
BC106929-1|AAI06930.1|  461|Homo sapiens thyroid hormone recepto...    38   0.022
Z49825-1|CAA89989.1|  504|Homo sapiens hepatocyte nuclear factor...    38   0.029
X87872-1|CAA61135.1|  408|Homo sapiens Hepatocyte nuclear factor...    38   0.029
X87871-1|CAA61134.1|  465|Homo sapiens Hepatocyte nuclear factor...    38   0.029
X87870-1|CAA61133.1|  455|Homo sapiens Hepatocyte nuclear factor...    38   0.029
X76930-1|CAA54248.1|  465|Homo sapiens hepatocyte nuclear factor...    38   0.029
U72969-1|AAB48082.1|  516|Homo sapiens hepatocyte nuclear factor...    38   0.029
U72967-1|AAB48083.1|  408|Homo sapiens hepatocyte nuclear factor...    38   0.029
EF591040-1|ABQ52204.1|  474|Homo sapiens hepatocyte nuclear fact...    38   0.029
DQ356894-1|ABC97372.1|  186|Homo sapiens peroxisome proliferativ...    38   0.029
AY680698-1|AAT91239.1|  395|Homo sapiens hepatocyte nuclear fact...    38   0.029
AY680697-1|AAT91238.1|  452|Homo sapiens hepatocyte nuclear fact...    38   0.029
AY680696-1|AAT91237.1|  442|Homo sapiens hepatocyte nuclear fact...    38   0.029
AL132772-3|CAI18857.1|  467|Homo sapiens hepatocyte nuclear fact...    38   0.029
AL132772-2|CAC01303.1|  474|Homo sapiens hepatocyte nuclear fact...    38   0.029
AL132772-1|CAI18856.1|  417|Homo sapiens hepatocyte nuclear fact...    38   0.029
U93553-1|AAD03155.1|  500|Homo sapiens alpha1-fetoprotein transc...    38   0.039
U80251-1|AAC78727.1|  495|Homo sapiens hepatocytic transcription...    38   0.039
D88155-1|BAA13546.1|  461|Homo sapiens AdBP4 protein.                  38   0.039
BC118652-1|AAI18653.1|  495|Homo sapiens nuclear receptor subfam...    38   0.039
BC118571-1|AAI18572.1|  495|Homo sapiens nuclear receptor subfam...    38   0.039
AF190464-2|AAG17124.1|  495|Homo sapiens hepatocytic transcripti...    38   0.039
AF190464-1|AAG17125.1|  541|Homo sapiens hepatocytic transcripti...    38   0.039
AF146343-1|AAD37378.1|  495|Homo sapiens CYP7A promoter binding ...    38   0.039
AF124247-1|AAD26565.1|  541|Homo sapiens hepatocytic transcripti...    38   0.039
AF049102-1|AAD03248.1|  323|Homo sapiens alpha1-fetoprotein tran...    38   0.039
AB019246-1|BAA34092.1|  541|Homo sapiens FTZ-F1 related protein ...    38   0.039
Z49826-1|CAA89990.2|  408|Homo sapiens hepatocyte nuclear factor...    37   0.068
BC105011-1|AAI05012.1|  408|Homo sapiens HNF4G protein protein.        37   0.068
BC105009-1|AAI05010.1|  408|Homo sapiens HNF4G protein protein.        37   0.068
AF133504-1|AAF00110.1|  408|Homo sapiens hepatocyte nuclear fact...    37   0.068
CR542091-1|CAG46888.1|  408|Homo sapiens HNF4G protein.                36   0.16 
U76388-1|AAB53105.1|  461|Homo sapiens steroidogenic factor 1 pr...    35   0.21 
BC032501-1|AAH32501.1|  461|Homo sapiens nuclear receptor subfam...    35   0.21 
AL354979-3|CAI10959.1|  461|Homo sapiens nuclear receptor subfam...    35   0.21 
AL354979-2|CAI10958.1|  178|Homo sapiens nuclear receptor subfam...    35   0.21 
AL137846-2|CAI10872.1|  461|Homo sapiens nuclear receptor subfam...    35   0.21 
X67482-1|CAA47824.1|  427|Homo sapiens HL-60 1,25-dihydroxyvitam...    34   0.36 
J03258-1|AAA61273.1|  427|Homo sapiens VDR protein.                    34   0.36 
BC060832-1|AAH60832.1|  427|Homo sapiens VDR protein protein.          34   0.36 
AY342401-1|AAP88938.1|  424|Homo sapiens vitamin D (1,25-dihydro...    34   0.36 
AF026260-1|AAB95155.1|  427|Homo sapiens vitamin D receptor prot...    34   0.36 
AB002168-1|BAA83389.1|  427|Homo sapiens vitamin D receptor prot...    34   0.36 
X51417-1|CAA35779.1|  433|Homo sapiens protein ( Human mRNA for ...    34   0.48 
X51416-1|CAA35778.1|  521|Homo sapiens protein ( Human mRNA for ...    34   0.48 
L38487-1|AAB17015.1|  481|Homo sapiens estrogen receptor-related...    34   0.48 
DQ514553-1|ABF47104.1|  423|Homo sapiens estrogen-related recept...    34   0.48 
BT019411-1|AAV38218.1|  447|Homo sapiens nuclear receptor subfam...    34   0.48 
BC131517-1|AAI31518.1|  503|Homo sapiens ESRRB protein protein.        34   0.48 
BC093722-1|AAH93722.1|  423|Homo sapiens estrogen-related recept...    34   0.48 
BC093720-1|AAH93720.1|  423|Homo sapiens estrogen-related recept...    34   0.48 
BC092470-1|AAH92470.1|  423|Homo sapiens ESRRA protein protein.        34   0.48 
BC064700-1|AAH64700.1|  442|Homo sapiens ESRRG protein protein.        34   0.48 
BC063795-1|AAH63795.2|  423|Homo sapiens estrogen-related recept...    34   0.48 
BC033701-1|AAH33701.1|  299|Homo sapiens Similar to estrogen-rel...    34   0.48 
BC008218-1|AAH08218.1|  343|Homo sapiens ESRRG protein protein.        34   0.48 
BC007915-1|AAH07915.2|  320|Homo sapiens ESRRA protein protein.        34   0.48 
AY528719-1|AAS00098.1|  435|Homo sapiens estrogen-related recept...    34   0.48 
AY451390-1|AAS15572.1|  508|Homo sapiens estrogen receptor-relat...    34   0.48 
AY451389-1|AAS15571.1|  433|Homo sapiens estrogen receptor-relat...    34   0.48 
AY388461-1|AAQ93381.1|  435|Homo sapiens estrogen-related recept...    34   0.48 
AY388460-1|AAQ93380.1|  435|Homo sapiens estrogen-related recept...    34   0.48 
AY388459-1|AAQ93379.1|  435|Homo sapiens estrogen-related recept...    34   0.48 
AY388458-1|AAQ93378.1|  435|Homo sapiens estrogen-related recept...    34   0.48 
AY388457-1|AAQ93377.1|  435|Homo sapiens estrogen-related recept...    34   0.48 
AY388456-1|AAQ93376.1|  458|Homo sapiens estrogen-related recept...    34   0.48 
AL512650-2|CAH71595.1|  442|Homo sapiens estrogen-related recept...    34   0.48 
AL512650-1|CAH71594.1|  435|Homo sapiens estrogen-related recept...    34   0.48 
AL445650-2|CAH70619.1|  442|Homo sapiens estrogen-related recept...    34   0.48 
AL445650-1|CAH70618.1|  435|Homo sapiens estrogen-related recept...    34   0.48 
AF094518-1|AAC99410.1|  458|Homo sapiens nuclear receptor ERRG2 ...    34   0.48 
AF094517-1|AAC99409.1|  500|Homo sapiens nuclear receptor ERRB2 ...    34   0.48 
AF058291-1|AAC39899.1|  436|Homo sapiens estrogen-related recept...    34   0.48 
AC016543-1|AAG29619.1|  262|Homo sapiens hERRB2 protein.               34   0.48 
AB020639-1|BAA74855.2|  469|Homo sapiens KIAA0832 protein protein.     34   0.48 
U32592-1|AAA75332.1|   56|Homo sapiens steroidogenic factor 1 pr...    32   1.5  
EF614253-1|ABR09276.1|  473|Homo sapiens nuclear receptor subfam...    32   1.5  
DQ923326-1|ABJ52966.1|  397|Homo sapiens orphan nuclear receptor...    32   1.5  
DQ911122-1|ABJ52965.1|  434|Homo sapiens orphan nuclear receptor...    32   1.5  
BC017304-1|AAH17304.2|  433|Homo sapiens NR1I2 protein protein.        32   1.5  
AY542548-1|AAS48621.1|   81|Homo sapiens nuclear receptor AdBP4 ...    32   1.5  
AY091855-1|AAM26736.1|  434|Homo sapiens steroid and xenobiotic ...    32   1.5  
AF364606-3|AAK38721.1|  397|Homo sapiens orphan nuclear receptor...    32   1.5  
AF364606-2|AAK38720.1|  434|Homo sapiens orphan nuclear receptor...    32   1.5  
AF364606-1|AAK38722.1|  473|Homo sapiens orphan nuclear receptor...    32   1.5  
AF084645-1|AAC64558.1|  434|Homo sapiens orphan nuclear receptor...    32   1.5  
AF084644-1|AAC64557.1|  473|Homo sapiens orphan nuclear receptor...    32   1.5  
AF061056-1|AAD05436.1|  434|Homo sapiens orphan nuclear receptor...    32   1.5  
X03635-2|CAA27284.1|  595|Homo sapiens oestrogen receptor protein.     31   2.5  
U47678-1|AAB00115.1|  701|Homo sapiens 80 kDa estrogen receptor ...    31   2.5  
M12674-1|AAA52399.1|  595|Homo sapiens ESR protein.                    31   2.5  
BC128574-1|AAI28575.1|  595|Homo sapiens estrogen receptor 1 pro...    31   2.5  
BC128573-1|AAI28574.1|  595|Homo sapiens estrogen receptor 1 pro...    31   2.5  
AY425004-1|AAQ91815.1|  595|Homo sapiens estrogen receptor 1 pro...    31   2.5  
AL590993-1|CAI14237.1|  595|Homo sapiens estrogen receptor 1 pro...    31   2.5  
AL356311-2|CAI21012.1|  595|Homo sapiens estrogen receptor 1 pro...    31   2.5  
AL078582-4|CAI42285.1|  595|Homo sapiens estrogen receptor 1 pro...    31   2.5  
AL049821-1|CAI22123.1|  595|Homo sapiens estrogen receptor 1 pro...    31   2.5  
AJ009937-3|CAB55494.1|  342|Homo sapiens nuclear hormone recepto...    31   2.5  
AJ009937-2|CAB55493.1|  420|Homo sapiens nuclear hormone recepto...    31   2.5  
AJ009937-1|CAB55492.1|  397|Homo sapiens nuclear hormone recepto...    31   2.5  
AJ009936-3|CAB55491.1|  379|Homo sapiens nuclear hormone recepto...    31   2.5  
AJ009936-2|CAB55490.1|  457|Homo sapiens nuclear hormone recepto...    31   2.5  
AJ009936-1|CAB55489.1|  434|Homo sapiens nuclear hormone recepto...    31   2.5  
AF123500-1|AAD52984.1|  444|Homo sapiens estrogen receptor alpha...    31   2.5  
U14534-1|AAA58594.1|  455|Homo sapiens orphan receptor protein.        31   3.4  
U07132-1|AAA61783.1|  461|Homo sapiens Ner-I protein.                  31   3.4  
CR456706-1|CAG32987.1|  461|Homo sapiens NR1H2 protein.                31   3.4  
BC074500-1|AAH74500.1|  461|Homo sapiens nuclear receptor subfam...    31   3.4  
BC047750-1|AAH47750.1|  461|Homo sapiens nuclear receptor subfam...    31   3.4  
BC041172-1|AAH41172.1|  402|Homo sapiens NR1H3 protein protein.        31   3.4  
BC033500-1|AAH33500.1|  461|Homo sapiens nuclear receptor subfam...    31   3.4  
BC008819-1|AAH08819.1|  387|Homo sapiens NR1H3 protein protein.        31   3.4  
BC007790-1|AAH07790.1|  461|Homo sapiens nuclear receptor subfam...    31   3.4  
U22662-1|AAA85856.1|  447|Homo sapiens nuclear orphan receptor L...    31   4.5  
BX649592-4|CAO03498.1| 1838|Homo sapiens plexin B2 protein.            31   4.5  
AY358508-1|AAQ88872.1|  277|Homo sapiens DILV594 protein.              31   4.5  
AB002313-1|BAA21571.1| 1841|Homo sapiens KIAA0315 protein.             31   4.5  

>X72631-1|CAB53540.1|  614|Homo sapiens Rev-ErbAalpha protein
           protein.
          Length = 614

 Score = 77.4 bits (182), Expect = 4e-14
 Identities = 33/59 (55%), Positives = 45/59 (76%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521
           NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+LA MQ + +   ++ ++   L+ +P
Sbjct: 183 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLETSP 241



 Score = 53.2 bits (122), Expect = 7e-07
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ IQY+ C KN+ CSI+RINR
Sbjct: 153 KGFFRRSIQQNIQYKRCLKNENCSIVRINR 182


>M24898-1|AAA52335.1|  614|Homo sapiens triiodothyronine receptor
           protein.
          Length = 614

 Score = 77.4 bits (182), Expect = 4e-14
 Identities = 33/59 (55%), Positives = 45/59 (76%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521
           NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+LA MQ + +   ++ ++   L+ +P
Sbjct: 183 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLETSP 241



 Score = 53.2 bits (122), Expect = 7e-07
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ IQY+ C KN+ CSI+RINR
Sbjct: 153 KGFFRRSIQQNIQYKRCLKNENCSIVRINR 182


>BC056148-1|AAH56148.1|  614|Homo sapiens nuclear receptor subfamily
           1, group D, member 1 protein.
          Length = 614

 Score = 77.4 bits (182), Expect = 4e-14
 Identities = 33/59 (55%), Positives = 45/59 (76%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521
           NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+LA MQ + +   ++ ++   L+ +P
Sbjct: 183 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLETSP 241



 Score = 53.2 bits (122), Expect = 7e-07
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ IQY+ C KN+ CSI+RINR
Sbjct: 153 KGFFRRSIQQNIQYKRCLKNENCSIVRINR 182


>BC047875-1|AAH47875.1|  614|Homo sapiens nuclear receptor subfamily
           1, group D, member 1 protein.
          Length = 614

 Score = 77.4 bits (182), Expect = 4e-14
 Identities = 33/59 (55%), Positives = 45/59 (76%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521
           NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+LA MQ + +   ++ ++   L+ +P
Sbjct: 183 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLETSP 241



 Score = 53.2 bits (122), Expect = 7e-07
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ IQY+ C KN+ CSI+RINR
Sbjct: 153 KGFFRRSIQQNIQYKRCLKNENCSIVRINR 182


>L31785-1|AAA65937.1|  579|Homo sapiens orphan nuclear hormone
           receptor BD73 protein.
          Length = 579

 Score = 73.3 bits (172), Expect = 6e-13
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L  MQ +  +  + Q
Sbjct: 153 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ 201



 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ IQY+ C KN+ CSI+R+NR
Sbjct: 123 KGFFRRSIQQNIQYKKCLKNENCSIMRMNR 152


>D16815-1|BAA20088.1|  579|Homo sapiens EAR-1r protein.
          Length = 579

 Score = 73.3 bits (172), Expect = 6e-13
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L  MQ +  +  + Q
Sbjct: 154 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ 202



 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ IQY+ C KN+ CSI+R+NR
Sbjct: 124 KGFFRRSIQQNIQYKKCLKNENCSIMRMNR 153


>CR457434-1|CAG33715.1|  579|Homo sapiens NR1D2 protein.
          Length = 579

 Score = 73.3 bits (172), Expect = 6e-13
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L  MQ +  +  + Q
Sbjct: 154 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ 202



 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ IQY+ C KN+ CSI+R+NR
Sbjct: 124 KGFFRRSIQQNIQYKKCLKNENCSIMRMNR 153


>BC070035-1|AAH70035.1|  408|Homo sapiens NR1D2 protein protein.
          Length = 408

 Score = 73.3 bits (172), Expect = 6e-13
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L  MQ +  +  + Q
Sbjct: 154 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ 202



 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ IQY+ C KN+ CSI+R+NR
Sbjct: 124 KGFFRRSIQQNIQYKKCLKNENCSIMRMNR 153


>BC045613-1|AAH45613.1|  579|Homo sapiens nuclear receptor subfamily
           1, group D, member 2 protein.
          Length = 579

 Score = 73.3 bits (172), Expect = 6e-13
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L  MQ +  +  + Q
Sbjct: 154 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ 202



 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ IQY+ C KN+ CSI+R+NR
Sbjct: 124 KGFFRRSIQQNIQYKKCLKNENCSIMRMNR 153


>AB209091-1|BAD92328.1|  549|Homo sapiens Orphan nuclear receptor
           NR1D2 variant protein.
          Length = 549

 Score = 73.3 bits (172), Expect = 6e-13
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L  MQ +  +  + Q
Sbjct: 123 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ 171



 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQQ IQY+ C KN+ CSI+R+NR
Sbjct: 93  KGFFRRSIQQNIQYKKCLKNENCSIMRMNR 122


>L07592-1|AAA36469.1|  441|Homo sapiens peroxisome proliferator
           activated receptor protein.
          Length = 441

 Score = 64.1 bits (149), Expect = 4e-10
 Identities = 24/51 (47%), Positives = 39/51 (76%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
           N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A +  +  S+ + Q A
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173



 Score = 31.9 bits (69), Expect = 1.9
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRR+I+ K++Y  C ++  C I + NR
Sbjct: 95  KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122


>BC007578-1|AAH07578.1|  361|Homo sapiens PPARD protein protein.
          Length = 361

 Score = 64.1 bits (149), Expect = 4e-10
 Identities = 24/51 (47%), Positives = 39/51 (76%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
           N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A +  +  S+ + Q A
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173



 Score = 31.9 bits (69), Expect = 1.9
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRR+I+ K++Y  C ++  C I + NR
Sbjct: 95  KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122


>BC002715-1|AAH02715.1|  361|Homo sapiens PPARD protein protein.
          Length = 361

 Score = 64.1 bits (149), Expect = 4e-10
 Identities = 24/51 (47%), Positives = 39/51 (76%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
           N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A +  +  S+ + Q A
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173



 Score = 31.9 bits (69), Expect = 1.9
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRR+I+ K++Y  C ++  C I + NR
Sbjct: 95  KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122


>AY919140-1|AAX14041.1|  441|Homo sapiens peroxisome proliferator
           activated receptor delta protein.
          Length = 441

 Score = 64.1 bits (149), Expect = 4e-10
 Identities = 24/51 (47%), Positives = 39/51 (76%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
           N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A +  +  S+ + Q A
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173



 Score = 31.9 bits (69), Expect = 1.9
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRR+I+ K++Y  C ++  C I + NR
Sbjct: 95  KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122


>AY442342-1|AAR05439.1|  441|Homo sapiens peroxisome proliferative
           activated receptor, delta protein.
          Length = 441

 Score = 64.1 bits (149), Expect = 4e-10
 Identities = 24/51 (47%), Positives = 39/51 (76%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
           N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A +  +  S+ + Q A
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173



 Score = 31.9 bits (69), Expect = 1.9
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRR+I+ K++Y  C ++  C I + NR
Sbjct: 95  KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122


>AL022721-9|CAD92505.1|  361|Homo sapiens peroxisome proliferative
           activated receptor, delta protein.
          Length = 361

 Score = 64.1 bits (149), Expect = 4e-10
 Identities = 24/51 (47%), Positives = 39/51 (76%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
           N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A +  +  S+ + Q A
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173



 Score = 31.9 bits (69), Expect = 1.9
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRR+I+ K++Y  C ++  C I + NR
Sbjct: 95  KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122


>AL022721-8|CAB38629.1|  441|Homo sapiens peroxisome proliferative
           activated receptor, delta protein.
          Length = 441

 Score = 64.1 bits (149), Expect = 4e-10
 Identities = 24/51 (47%), Positives = 39/51 (76%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
           N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A +  +  S+ + Q A
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173



 Score = 31.9 bits (69), Expect = 1.9
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRR+I+ K++Y  C ++  C I + NR
Sbjct: 95  KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122


>AF246303-1|AAF62553.1|  441|Homo sapiens peroxisome proliferative
           activated receptor delta protein.
          Length = 441

 Score = 64.1 bits (149), Expect = 4e-10
 Identities = 24/51 (47%), Positives = 39/51 (76%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
           N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A +  +  S+ + Q A
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173



 Score = 31.9 bits (69), Expect = 1.9
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRR+I+ K++Y  C ++  C I + NR
Sbjct: 95  KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122


>U16997-1|AAA64751.1|  560|Homo sapiens ROR gamma protein.
          Length = 560

 Score = 62.9 bits (146), Expect = 9e-10
 Identities = 25/49 (51%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +Q+    R  +Q
Sbjct: 81  NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 129


>CR457436-1|CAG33717.1|  518|Homo sapiens RORC protein.
          Length = 518

 Score = 62.9 bits (146), Expect = 9e-10
 Identities = 25/49 (51%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +Q+    R  +Q
Sbjct: 81  NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 129


>BC110571-1|AAI10572.1|  518|Homo sapiens RAR-related orphan
           receptor C protein.
          Length = 518

 Score = 62.9 bits (146), Expect = 9e-10
 Identities = 25/49 (51%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +Q+    R  +Q
Sbjct: 81  NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 129


>BC031554-1|AAH31554.1|  518|Homo sapiens RAR-related orphan
           receptor C protein.
          Length = 518

 Score = 62.9 bits (146), Expect = 9e-10
 Identities = 25/49 (51%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +Q+    R  +Q
Sbjct: 81  NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 129


>AL589765-18|CAI17180.1|  518|Homo sapiens RAR-related orphan
           receptor C protein.
          Length = 518

 Score = 62.9 bits (146), Expect = 9e-10
 Identities = 25/49 (51%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +Q+    R  +Q
Sbjct: 81  NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 129


>AL589765-17|CAI17179.1|  497|Homo sapiens RAR-related orphan
           receptor C protein.
          Length = 497

 Score = 62.9 bits (146), Expect = 9e-10
 Identities = 25/49 (51%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +Q+    R  +Q
Sbjct: 60  NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 108


>AK223137-1|BAD96857.1|  518|Homo sapiens RAR-related orphan
           receptor C isoform a variant protein.
          Length = 518

 Score = 62.9 bits (146), Expect = 9e-10
 Identities = 25/49 (51%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +Q+    R  +Q
Sbjct: 81  NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 129


>U04899-1|AAA62660.1|  548|Homo sapiens RORalpha3 protein.
          Length = 548

 Score = 62.5 bits (145), Expect = 1e-09
 Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
           NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++  + A +Q+       R H+Q
Sbjct: 148 NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 199


>U04898-1|AAA62659.1|  556|Homo sapiens RORalpha2 protein.
          Length = 556

 Score = 62.5 bits (145), Expect = 1e-09
 Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
           NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++  + A +Q+       R H+Q
Sbjct: 156 NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 207


>U04897-1|AAA62658.1|  523|Homo sapiens RORalpha1 protein.
          Length = 523

 Score = 62.5 bits (145), Expect = 1e-09
 Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
           NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++  + A +Q+       R H+Q
Sbjct: 123 NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 174


>L14611-1|AAA02963.1|  468|Homo sapiens transcription factor
           protein.
          Length = 468

 Score = 62.5 bits (145), Expect = 1e-09
 Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
           NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++  + A +Q+       R H+Q
Sbjct: 68  NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 119


>BC100990-1|AAI00991.1|  468|Homo sapiens RAR-related orphan
           receptor A protein.
          Length = 468

 Score = 62.5 bits (145), Expect = 1e-09
 Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
           NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++  + A +Q+       R H+Q
Sbjct: 68  NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 119


>BC100989-1|AAI00990.1|  468|Homo sapiens RAR-related orphan
           receptor A protein.
          Length = 468

 Score = 62.5 bits (145), Expect = 1e-09
 Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
           NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++  + A +Q+       R H+Q
Sbjct: 68  NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 119


>BC100988-1|AAI00989.1|  468|Homo sapiens RAR-related orphan
           receptor A protein.
          Length = 468

 Score = 62.5 bits (145), Expect = 1e-09
 Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
           NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++  + A +Q+       R H+Q
Sbjct: 68  NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 119


>BC100987-1|AAI00988.1|  468|Homo sapiens RAR-related orphan
           receptor A protein.
          Length = 468

 Score = 62.5 bits (145), Expect = 1e-09
 Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
           NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++  + A +Q+       R H+Q
Sbjct: 68  NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 119


>BC008831-1|AAH08831.1|  523|Homo sapiens RAR-related orphan
           receptor A protein.
          Length = 523

 Score = 62.5 bits (145), Expect = 1e-09
 Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
           NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++  + A +Q+       R H+Q
Sbjct: 123 NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 174


>Y08639-1|CAA69929.1|  459|Homo sapiens nuclear orphan receptor
           ROR-beta protein.
          Length = 459

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM---QQSSSSRAHEQAAAAE 506
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +   QQ    +  EQ+  AE
Sbjct: 60  NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQEQSGEAE 116


>X90563-2|CAA62153.1|  475|Homo sapiens peroxisome proliferator
           activated receptor gamma protein.
          Length = 475

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA +         E A
Sbjct: 158 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 207


>X90563-1|CAA62152.1|  477|Homo sapiens peroxisome proliferator
           activated receptor gamma protein.
          Length = 477

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA +         E A
Sbjct: 160 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 209


>U79012-1|AAC51248.1|  505|Homo sapiens ligand activated
           transcription factor PPARgamma2 protein.
          Length = 505

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA +         E A
Sbjct: 188 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 237


>U63415-1|AAB04028.1|  505|Homo sapiens peroxisome proliferator
           activated receptor gamma 2 protein.
          Length = 505

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA +         E A
Sbjct: 188 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 237


>L40904-1|AAA80314.2|  477|Homo sapiens peroxisome proliferator
           activated receptor gamma protein.
          Length = 477

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA +         E A
Sbjct: 160 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 209


>BT007281-1|AAP35945.1|  477|Homo sapiens peroxisome proliferative
           activated receptor, gamma protein.
          Length = 477

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA +         E A
Sbjct: 160 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 209


>BC006811-1|AAH06811.1|  477|Homo sapiens peroxisome
           proliferator-activated receptor gamma protein.
          Length = 477

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA +         E A
Sbjct: 160 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 209


>AY222643-1|AAO66458.1|  584|Homo sapiens CREB3L2-PPARgamma protein.
          Length = 584

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA +         E A
Sbjct: 267 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 316


>AY157024-1|AAN38992.2|  475|Homo sapiens peroxisome proliferative
           activated receptor gamma protein.
          Length = 475

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA +         E A
Sbjct: 158 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 207


>AK223528-1|BAD97248.1|  478|Homo sapiens peroxisome proliferative
           activated receptor gamma isoform 2 variant protein.
          Length = 478

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA +         E A
Sbjct: 161 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 210


>AJ698135-1|CAG29019.1|  248|Homo sapiens peroxisome proliferative
           activated receptor gamma protein.
          Length = 248

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA +         E A
Sbjct: 158 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 207


>AJ563370-1|CAD91389.1|  264|Homo sapiens peroxisome proliferative
           activated receptor gamma protein.
          Length = 264

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA +         E A
Sbjct: 158 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 207


>AJ563369-1|CAD91388.1|  280|Homo sapiens peroxisome proliferative
           activated receptor gamma protein.
          Length = 280

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA +         E A
Sbjct: 174 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 223


>AB005526-1|BAA23354.1|  474|Homo sapiens peroxisome proliferator
           activated-receptor gamma protein.
          Length = 474

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA +         E A
Sbjct: 160 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 209


>BC093774-1|AAH93774.1|  459|Homo sapiens RAR-related orphan
           receptor B protein.
          Length = 459

 Score = 60.9 bits (141), Expect = 4e-09
 Identities = 26/49 (53%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +Q+    R  EQ
Sbjct: 60  NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQK-HQQRLQEQ 107


>BC093772-1|AAH93772.1|  459|Homo sapiens RAR-related orphan
           receptor B protein.
          Length = 459

 Score = 60.9 bits (141), Expect = 4e-09
 Identities = 26/49 (53%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +Q+    R  EQ
Sbjct: 60  NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQK-HQQRLQEQ 107


>BC051830-1|AAH51830.1|  459|Homo sapiens RAR-related orphan
           receptor B protein.
          Length = 459

 Score = 60.9 bits (141), Expect = 4e-09
 Identities = 26/49 (53%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +Q+    R  EQ
Sbjct: 60  NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQK-HQQRLQEQ 107


>AL355674-1|CAD13280.2|  459|Homo sapiens RAR-related orphan
           receptor B protein.
          Length = 459

 Score = 60.9 bits (141), Expect = 4e-09
 Identities = 26/49 (53%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +Q+    R  EQ
Sbjct: 60  NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQK-HQQRLQEQ 107


>AL137018-1|CAD13276.2|  459|Homo sapiens RAR-related orphan
           receptor B protein.
          Length = 459

 Score = 60.9 bits (141), Expect = 4e-09
 Identities = 26/49 (53%), Positives = 38/49 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
           NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++  + A +Q+    R  EQ
Sbjct: 60  NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQK-HQQRLQEQ 107


>AB099507-1|BAC78903.1|  161|Homo sapiens peroxisome proliferative
           activated receptor-delta isoform protein.
          Length = 161

 Score = 59.7 bits (138), Expect = 8e-09
 Identities = 21/38 (55%), Positives = 33/38 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM 458
           N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A +
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGL 160



 Score = 31.9 bits (69), Expect = 1.9
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRR+I+ K++Y  C ++  C I + NR
Sbjct: 95  KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122


>Y07619-1|CAA68898.1|  468|Homo sapiens peroxisome
           proliferator-activated receptor alpha protein.
          Length = 468

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 22/36 (61%), Positives = 31/36 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
           N+CQYCR  KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186


>S74349-1|AAB32649.1|  468|Homo sapiens peroxisome proliferator
           activated receptor alpha protein.
          Length = 468

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 22/36 (61%), Positives = 31/36 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
           N+CQYCR  KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186


>L02932-1|AAA36468.1|  468|Homo sapiens peroxisome proliferator
           activated receptor protein.
          Length = 468

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 22/36 (61%), Positives = 31/36 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
           N+CQYCR  KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186


>D83233-1|BAA18949.1|  506|Homo sapiens PPAR gamma2 protein.
          Length = 506

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 24/50 (48%), Positives = 34/50 (68%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
           N+CQYCR +KC+AVGMS +A+RFGR+ + EK ++LA +         E A
Sbjct: 188 NKCQYCRFQKCLAVGMSHNAIRFGRIAQAEKEKLLAEISSDIDQLNPESA 237


>CR457435-1|CAG33716.1|  468|Homo sapiens PPARA protein.
          Length = 468

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 22/36 (61%), Positives = 31/36 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
           N+CQYCR  KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186


>CR456547-1|CAG30433.1|  468|Homo sapiens PPARA protein.
          Length = 468

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 22/36 (61%), Positives = 31/36 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
           N+CQYCR  KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186


>BC000052-1|AAH00052.1|  258|Homo sapiens peroxisome
           proliferator-activated receptor alpha protein.
          Length = 258

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 22/36 (61%), Positives = 31/36 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
           N+CQYCR  KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186


>AY206718-1|AAO13489.1|  468|Homo sapiens peroxisome proliferative
           activated receptor, alpha protein.
          Length = 468

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 22/36 (61%), Positives = 31/36 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
           N+CQYCR  KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186


>AL078611-2|CAI18764.1|  468|Homo sapiens peroxisome proliferative
           activated receptor, alpha protein.
          Length = 468

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 22/36 (61%), Positives = 31/36 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
           N+CQYCR  KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186


>AL049856-1|CAI22450.1|  468|Homo sapiens peroxisome proliferative
           activated receptor, alpha protein.
          Length = 468

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 22/36 (61%), Positives = 31/36 (86%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
           N+CQYCR  KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186


>Y00291-1|CAA68398.1|  448|Homo sapiens protein ( Human hap mRNA
           encoding a DNA-binding hormone receptor. ).
          Length = 448

 Score = 52.4 bits (120), Expect = 1e-06
 Identities = 31/84 (36%), Positives = 49/84 (58%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R  + V + +T NRCQYCRL+KC  VGMS+++VR  R  K+++        +   + ++E
Sbjct: 119 RDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKET------SKQECTESYE 172

Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
               AELDD   L  ++ +AH +T
Sbjct: 173 M--TAELDD---LTEKIRKAHQET 191



 Score = 30.3 bits (65), Expect = 5.9
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 102 KGFFRRSIQKNMIY-TCHRDKNCVINKVTR 130


>X07282-1|CAA30262.1|  448|Homo sapiens protein ( Human mRNA for
           retinoic acid receptor-epsilon protein. ).
          Length = 448

 Score = 52.4 bits (120), Expect = 1e-06
 Identities = 31/84 (36%), Positives = 49/84 (58%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R  + V + +T NRCQYCRL+KC  VGMS+++VR  R  K+++        +   + ++E
Sbjct: 119 RDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKET------SKQECTESYE 172

Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
               AELDD   L  ++ +AH +T
Sbjct: 173 M--TAELDD---LTEKIRKAHQET 191



 Score = 30.3 bits (65), Expect = 5.9
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 102 KGFFRRSIQKNMIY-TCHRDKNCVINKVTR 130


>DQ083391-1|AAZ32403.1|  184|Homo sapiens retinoic acid receptor
           beta 1' protein.
          Length = 184

 Score = 52.4 bits (120), Expect = 1e-06
 Identities = 31/84 (36%), Positives = 49/84 (58%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R  + V + +T NRCQYCRL+KC  VGMS+++VR  R  K+++        +   + ++E
Sbjct: 76  RDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKET------SKQECTESYE 129

Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
               AELDD   L  ++ +AH +T
Sbjct: 130 M--TAELDD---LTEKIRKAHQET 148



 Score = 30.3 bits (65), Expect = 5.9
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 59  KGFFRRSIQKNMIY-TCHRDKNCVINKVTR 87


>CR536558-1|CAG38795.1|  336|Homo sapiens RARB protein.
          Length = 336

 Score = 52.4 bits (120), Expect = 1e-06
 Identities = 31/84 (36%), Positives = 49/84 (58%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R  + V + +T NRCQYCRL+KC  VGMS+++VR  R  K+++        +   + ++E
Sbjct: 7   RDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKET------SKQECTESYE 60

Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
               AELDD   L  ++ +AH +T
Sbjct: 61  M--TAELDD---LTEKIRKAHQET 79


>BC060794-1|AAH60794.1|  448|Homo sapiens retinoic acid receptor,
           beta protein.
          Length = 448

 Score = 52.4 bits (120), Expect = 1e-06
 Identities = 31/84 (36%), Positives = 49/84 (58%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R  + V + +T NRCQYCRL+KC  VGMS+++VR  R  K+++        +   + ++E
Sbjct: 119 RDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKET------SKQECTESYE 172

Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
               AELDD   L  ++ +AH +T
Sbjct: 173 M--TAELDD---LTEKIRKAHQET 191



 Score = 30.3 bits (65), Expect = 5.9
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 102 KGFFRRSIQKNMIY-TCHRDKNCVINKVTR 130


>BC050415-1|AAH50415.2|  346|Homo sapiens RARB protein protein.
          Length = 346

 Score = 52.4 bits (120), Expect = 1e-06
 Identities = 31/84 (36%), Positives = 49/84 (58%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R  + V + +T NRCQYCRL+KC  VGMS+++VR  R  K+++        +   + ++E
Sbjct: 17  RDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKET------SKQECTESYE 70

Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
               AELDD   L  ++ +AH +T
Sbjct: 71  M--TAELDD---LTEKIRKAHQET 89



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 257 GFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 1   GFFRRSIQKNMIY-TCHRDKNCVINKVTR 28


>AY501390-1|AAS85757.1|  336|Homo sapiens retinoic acid receptor
           beta 5 protein.
          Length = 336

 Score = 52.4 bits (120), Expect = 1e-06
 Identities = 31/84 (36%), Positives = 49/84 (58%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R  + V + +T NRCQYCRL+KC  VGMS+++VR  R  K+++        +   + ++E
Sbjct: 7   RDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKET------SKQECTESYE 60

Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
               AELDD   L  ++ +AH +T
Sbjct: 61  M--TAELDD---LTEKIRKAHQET 79


>AF157483-1|AAD45688.1|  336|Homo sapiens retinoic acid receptor
           beta 4 protein.
          Length = 336

 Score = 52.4 bits (120), Expect = 1e-06
 Identities = 31/84 (36%), Positives = 49/84 (58%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R  + V + +T NRCQYCRL+KC  VGMS+++VR  R  K+++        +   + ++E
Sbjct: 7   RDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKET------SKQECTESYE 60

Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
               AELDD   L  ++ +AH +T
Sbjct: 61  M--TAELDD---LTEKIRKAHQET 79


>X12794-1|CAA31282.1|  403|Homo sapiens protein ( Human v-erbA
           related ear-2 gene. ).
          Length = 403

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAEL---DD 515
           N+CQYCRLKKC  VGM ++AV+ GR+P      + A+      S     A+  +L     
Sbjct: 106 NQCQYCRLKKCFRVGMRKEAVQRGRIPHSLPGAVAASSGSPPGSALAAVASGGDLFPGQP 165

Query: 516 APRLLARVVRA 548
              L+A+++RA
Sbjct: 166 VSELIAQLLRA 176


>M57707-1|AAA63254.1|  454|Homo sapiens retinoic acid receptor-gamma
           protein.
          Length = 454

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 29/84 (34%), Positives = 49/84 (58%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R  + + + +T NRCQYCRL+KC  VGMS++AVR  R  K+++      +++  S  ++E
Sbjct: 128 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKE------VKEEGSPDSYE 181

Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
            +   E      L+ +V +AH +T
Sbjct: 182 LSPQLE-----ELITKVSKAHQET 200



 Score = 31.5 bits (68), Expect = 2.5
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 106 SCEGCKGFFRRSIQKNMVY-TCHRDKNCIINKVTR 139


>M38258-1|AAA60254.1|  454|Homo sapiens retinoic acid
           receptor-gamma-1 protein.
          Length = 454

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 29/84 (34%), Positives = 49/84 (58%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R  + + + +T NRCQYCRL+KC  VGMS++AVR  R  K+++      +++  S  ++E
Sbjct: 128 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKE------VKEEGSPDSYE 181

Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
            +   E      L+ +V +AH +T
Sbjct: 182 LSPQLE-----ELITKVSKAHQET 200



 Score = 31.5 bits (68), Expect = 2.5
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 106 SCEGCKGFFRRSIQKNMVY-TCHRDKNCIINKVTR 139


>M24857-1|AAA52692.1|  454|Homo sapiens RARG protein.
          Length = 454

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 29/84 (34%), Positives = 49/84 (58%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R  + + + +T NRCQYCRL+KC  VGMS++AVR  R  K+++      +++  S  ++E
Sbjct: 128 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKE------VKEEGSPDSYE 181

Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
            +   E      L+ +V +AH +T
Sbjct: 182 LSPQLE-----ELITKVSKAHQET 200



 Score = 31.5 bits (68), Expect = 2.5
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 106 SCEGCKGFFRRSIQKNMVY-TCHRDKNCIINKVTR 139


>BC093729-1|AAH93729.1|  454|Homo sapiens retinoic acid receptor,
           gamma protein.
          Length = 454

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 29/84 (34%), Positives = 49/84 (58%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R  + + + +T NRCQYCRL+KC  VGMS++AVR  R  K+++      +++  S  ++E
Sbjct: 128 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKE------VKEEGSPDSYE 181

Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
            +   E      L+ +V +AH +T
Sbjct: 182 LSPQLE-----ELITKVSKAHQET 200



 Score = 31.5 bits (68), Expect = 2.5
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 106 SCEGCKGFFRRSIQKNMVY-TCHRDKNCIINKVTR 139


>BC093727-1|AAH93727.1|  454|Homo sapiens retinoic acid receptor,
           gamma protein.
          Length = 454

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 29/84 (34%), Positives = 49/84 (58%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R  + + + +T NRCQYCRL+KC  VGMS++AVR  R  K+++      +++  S  ++E
Sbjct: 128 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKE------VKEEGSPDSYE 181

Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
            +   E      L+ +V +AH +T
Sbjct: 182 LSPQLE-----ELITKVSKAHQET 200



 Score = 31.5 bits (68), Expect = 2.5
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 106 SCEGCKGFFRRSIQKNMVY-TCHRDKNCIINKVTR 139


>BC084544-1|AAH84544.2|  404|Homo sapiens nuclear receptor subfamily
           2, group F, member 6 protein.
          Length = 404

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAEL---DD 515
           N+CQYCRLKKC  VGM ++AV+ GR+P      + A+      S     A+  +L     
Sbjct: 106 NQCQYCRLKKCFRVGMRKEAVQRGRIPHSLPGAVAASSGSPPGSALAAVASGGDLFPGQP 165

Query: 516 APRLLARVVRA 548
              L+A+++RA
Sbjct: 166 VSELIAQLLRA 176


>BC063018-1|AAH63018.2|  404|Homo sapiens nuclear receptor subfamily
           2, group F, member 6 protein.
          Length = 404

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAEL---DD 515
           N+CQYCRLKKC  VGM ++AV+ GR+P      + A+      S     A+  +L     
Sbjct: 106 NQCQYCRLKKCFRVGMRKEAVQRGRIPHSLPGAVAASSGSPPGSALAAVASGGDLFPGQP 165

Query: 516 APRLLARVVRA 548
              L+A+++RA
Sbjct: 166 VSELIAQLLRA 176


>BC002669-1|AAH02669.3|  404|Homo sapiens nuclear receptor subfamily
           2, group F, member 6 protein.
          Length = 404

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAEL---DD 515
           N+CQYCRLKKC  VGM ++AV+ GR+P      + A+      S     A+  +L     
Sbjct: 106 NQCQYCRLKKCFRVGMRKEAVQRGRIPHSLPGAVAASSGSPPGSALAAVASGGDLFPGQP 165

Query: 516 APRLLARVVRA 548
              L+A+++RA
Sbjct: 166 VSELIAQLLRA 176


>AJ250835-1|CAB60726.1|  381|Homo sapiens retinoic acid receptor
           protein.
          Length = 381

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 29/84 (34%), Positives = 49/84 (58%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
           R  + + + +T NRCQYCRL+KC  VGMS++AVR  R  K+++      +++  S  ++E
Sbjct: 55  RDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKE------VKEEGSPDSYE 108

Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
            +   E      L+ +V +AH +T
Sbjct: 109 LSPQLE-----ELITKVSKAHQET 127


>AY013703-1|AAG41594.2|   58|Homo sapiens retinoic acid receptor
           gamma protein.
          Length = 58

 Score = 50.4 bits (115), Expect = 5e-06
 Identities = 21/36 (58%), Positives = 28/36 (77%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443
           +T NRCQYCRL+KC  VGMS++AVR  R  K+++ R
Sbjct: 4   VTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKEVR 39


>U60477-1|AAB09475.1|  414|Homo sapiens apoliprotein AI regulatory
           protein-1 protein.
          Length = 414

 Score = 49.6 bits (113), Expect = 9e-06
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH 485
           N+CQYCRLKKC+ VGM R+AV+ GR+P  +      A+        H
Sbjct: 129 NQCQYCRLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCH 175


>M64497-1|AAA86429.1|  414|Homo sapiens apolipoprotein AI regulatory
           protein-1 protein.
          Length = 414

 Score = 49.6 bits (113), Expect = 9e-06
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH 485
           N+CQYCRLKKC+ VGM R+AV+ GR+P  +      A+        H
Sbjct: 129 NQCQYCRLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCH 175


>M62760-1|AAA21479.1|  351|Homo sapiens ovalbumin upstream promoter
           transcription factor II protein.
          Length = 351

 Score = 49.6 bits (113), Expect = 9e-06
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH 485
           N+CQYCRLKKC+ VGM R+AV+ GR+P  +      A+        H
Sbjct: 129 NQCQYCRLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCH 175


>BC042897-1|AAH42897.1|  414|Homo sapiens nuclear receptor subfamily
           2, group F, member 2 protein.
          Length = 414

 Score = 49.6 bits (113), Expect = 9e-06
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH 485
           N+CQYCRLKKC+ VGM R+AV+ GR+P  +      A+        H
Sbjct: 129 NQCQYCRLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCH 175


>BC014664-1|AAH14664.1|  414|Homo sapiens nuclear receptor subfamily
           2, group F, member 2 protein.
          Length = 414

 Score = 49.6 bits (113), Expect = 9e-06
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH 485
           N+CQYCRLKKC+ VGM R+AV+ GR+P  +      A+        H
Sbjct: 129 NQCQYCRLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCH 175


>X16155-1|CAA34277.1|  418|Homo sapiens COUP-TF protein.
          Length = 418

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           N+CQYCRLKKC+ VGM R+AV+ GR+P
Sbjct: 131 NQCQYCRLKKCLKVGMRREAVQRGRMP 157


>X12795-1|CAA31283.1|  423|Homo sapiens protein ( Human v-erbA
           related ear-3 gene. ).
          Length = 423

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           N+CQYCRLKKC+ VGM R+AV+ GR+P
Sbjct: 136 NQCQYCRLKKCLKVGMRREAVQRGRMP 162


>BC017493-1|AAH17493.1|  423|Homo sapiens nuclear receptor subfamily
           2, group F, member 1 protein.
          Length = 423

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           N+CQYCRLKKC+ VGM R+AV+ GR+P
Sbjct: 136 NQCQYCRLKKCLKVGMRREAVQRGRMP 162


>BC004154-1|AAH04154.1|  423|Homo sapiens nuclear receptor subfamily
           2, group F, member 1 protein.
          Length = 423

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 19/27 (70%), Positives = 24/27 (88%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           N+CQYCRLKKC+ VGM R+AV+ GR+P
Sbjct: 136 NQCQYCRLKKCLKVGMRREAVQRGRMP 162


>X06614-1|CAA29829.1|  462|Homo sapiens protein ( Human mRNA for
           receptor of retinoic acid. ).
          Length = 462

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           R  + + + +T NRCQYCRL+KC  VGMS+++VR  R  K+++
Sbjct: 126 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 168



 Score = 30.7 bits (66), Expect = 4.5
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 109 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 137


>X06538-1|CAA29787.1|  432|Homo sapiens protein ( Human mRNA for
           retinoic acid receptor. ).
          Length = 432

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           R  + + + +T NRCQYCRL+KC  VGMS+++VR  R  K+++
Sbjct: 96  RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 138



 Score = 30.7 bits (66), Expect = 4.5
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 79  KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 107


>U41743-1|AAB00113.1|  520|Homo sapiens nucleophosmin-retinoic acid
           receptor alpha fusion protein NPM-RAR short form
           protein.
          Length = 520

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           R  + + + +T NRCQYCRL+KC  VGMS+++VR  R  K+++
Sbjct: 184 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 226



 Score = 30.7 bits (66), Expect = 4.5
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 167 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 195


>U41742-1|AAB00112.1|  563|Homo sapiens nucleophosmin-retinoic acid
           receptor alpha fusion protein NPM-RAR long form protein.
          Length = 563

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           R  + + + +T NRCQYCRL+KC  VGMS+++VR  R  K+++
Sbjct: 227 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 269



 Score = 30.7 bits (66), Expect = 4.5
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 210 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 238


>S50916-1|AAB19602.2|  416|Homo sapiens retinoic acid receptor alpha
           protein.
          Length = 416

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           R  + + + +T NRCQYCRL+KC  VGMS+++VR  R  K+++
Sbjct: 80  RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 122



 Score = 30.7 bits (66), Expect = 4.5
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 63  KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 91


>M73779-1|AAA60126.1|  797|Homo sapiens PML-RAR protein protein.
          Length = 797

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           R  + + + +T NRCQYCRL+KC  VGMS+++VR  R  K+++
Sbjct: 461 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 503



 Score = 30.7 bits (66), Expect = 4.5
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 444 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 472


>CR457438-1|CAG33719.1|  462|Homo sapiens RARA protein.
          Length = 462

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           R  + + + +T NRCQYCRL+KC  VGMS+++VR  R  K+++
Sbjct: 126 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 168



 Score = 30.7 bits (66), Expect = 4.5
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 109 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 137


>BC071733-1|AAH71733.1|  457|Homo sapiens retinoic acid receptor,
           alpha protein.
          Length = 457

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           R  + + + +T NRCQYCRL+KC  VGMS+++VR  R  K+++
Sbjct: 121 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 163



 Score = 30.7 bits (66), Expect = 4.5
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 104 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 132


>BC008727-1|AAH08727.1|  462|Homo sapiens retinoic acid receptor,
           alpha protein.
          Length = 462

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           R  + + + +T NRCQYCRL+KC  VGMS+++VR  R  K+++
Sbjct: 126 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 168



 Score = 30.7 bits (66), Expect = 4.5
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 109 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 137


>AF088895-1|AAD05222.1|  462|Homo sapiens retinoic acid receptor
           alpha protein.
          Length = 462

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           R  + + + +T NRCQYCRL+KC  VGMS+++VR  R  K+++
Sbjct: 126 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 168



 Score = 30.7 bits (66), Expect = 4.5
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 109 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 137


>AF012304-1|AAC33511.1|  194|Homo sapiens nuclear mitotic apparatus
           protein-retinoic acid receptor alpha fusion protein
           protein.
          Length = 194

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           R  + + + +T NRCQYCRL+KC  VGMS+++VR  R  K+++
Sbjct: 130 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 172



 Score = 30.7 bits (66), Expect = 4.5
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           +GFFRRSIQ+ + Y  C +++ C I ++ R
Sbjct: 113 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 141


>U38480-1|AAA80681.1|  463|Homo sapiens retinoid X receptor-gamma
           protein.
          Length = 463

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSS-SSRAHEQAAAAELDDAP 521
           NRCQYCR +KC+ +GM R+AV+  R   RE+A   A    S       E+   AEL   P
Sbjct: 189 NRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECATSGHEDMPVERILEAELAVEP 248

Query: 522 R 524
           +
Sbjct: 249 K 249


>CR456705-1|CAG32986.1|  463|Homo sapiens RXRG protein.
          Length = 463

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSS-SSRAHEQAAAAELDDAP 521
           NRCQYCR +KC+ +GM R+AV+  R   RE+A   A    S       E+   AEL   P
Sbjct: 189 NRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECATSGHEDMPVERILEAELAVEP 248

Query: 522 R 524
           +
Sbjct: 249 K 249


>BC041421-1|AAH41421.1|  322|Homo sapiens NR2E3 protein protein.
          Length = 322

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
           N+CQ CRLKKC+  GM++DAV+  R P+      L +M+ ++ SR     A
Sbjct: 10  NQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVHLDSMESNTESRPESLVA 60


>BC012063-1|AAH12063.1|  463|Homo sapiens retinoid X receptor, gamma
           protein.
          Length = 463

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSS-SSRAHEQAAAAELDDAP 521
           NRCQYCR +KC+ +GM R+AV+  R   RE+A   A    S       E+   AEL   P
Sbjct: 189 NRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECATSGHEDMPVERILEAELAVEP 248

Query: 522 R 524
           +
Sbjct: 249 K 249


>AL160058-2|CAC00596.1|  463|Homo sapiens retinoid X receptor, gamma
           protein.
          Length = 463

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSS-SSRAHEQAAAAELDDAP 521
           NRCQYCR +KC+ +GM R+AV+  R   RE+A   A    S       E+   AEL   P
Sbjct: 189 NRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECATSGHEDMPVERILEAELAVEP 248

Query: 522 R 524
           +
Sbjct: 249 K 249


>AJ276674-1|CAB82769.1|  410|Homo sapiens photoreceptor-specific
           nuclear receptor protein.
          Length = 410

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
           N+CQ CRLKKC+  GM++DAV+  R P+      L +M+ ++ SR     A
Sbjct: 98  NQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVHLDSMESNTESRPESLVA 148


>AF148128-1|AAF22227.1|  367|Homo sapiens nuclear receptor protein.
          Length = 367

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
           N+CQ CRLKKC+  GM++DAV+  R P+      L +M+ ++ SR     A
Sbjct: 98  NQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVHLDSMESNTESRPESLVA 148


>AF121129-1|AAD28301.1|  410|Homo sapiens photoreceptor-specific
           nuclear receptor protein.
          Length = 410

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
           N+CQ CRLKKC+  GM++DAV+  R P+      L +M+ ++ SR     A
Sbjct: 98  NQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVHLDSMESNTESRPESLVA 148


>M29960-1|AAA36761.1|  603|Homo sapiens protein ( Human steroid
           receptor (TR2-11) mRNA, complete cds. ).
          Length = 603

 Score = 45.6 bits (103), Expect = 1e-04
 Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
           NRCQYCRL++CIA GM +D+V+  R P    REK+   AA
Sbjct: 163 NRCQYCRLQRCIAFGMKQDSVQCERKPIEVSREKSSNCAA 202


>M29959-1|AAA36762.1|  467|Homo sapiens protein ( Human steroid
           receptor (TR2-9) mRNA, complete cds. ).
          Length = 467

 Score = 45.6 bits (103), Expect = 1e-04
 Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
           NRCQYCRL++CIA GM +D+V+  R P    REK+   AA
Sbjct: 163 NRCQYCRLQRCIAFGMKQDSVQCERKPIEVSREKSSNCAA 202


>M21985-1|AAA36650.1|  483|Homo sapiens protein ( Human steroid
           receptor TR2 mRNA, complete cds. ).
          Length = 483

 Score = 45.6 bits (103), Expect = 1e-04
 Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
           NRCQYCRL++CIA GM +D+V+  R P    REK+   AA
Sbjct: 163 NRCQYCRLQRCIAFGMKQDSVQCERKPIEVSREKSSNCAA 202


>BC040141-1|AAH40141.1|  467|Homo sapiens nuclear receptor subfamily
           2, group C, member 1 protein.
          Length = 467

 Score = 45.6 bits (103), Expect = 1e-04
 Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
           NRCQYCRL++CIA GM +D+V+  R P    REK+   AA
Sbjct: 163 NRCQYCRLQRCIAFGMKQDSVQCERKPIEVSREKSSNCAA 202


>X52773-1|CAA36982.1|  462|Homo sapiens protein ( Human mRNA for
           retinoic acid receptor-like protein. ).
          Length = 462

 Score = 44.0 bits (99), Expect = 4e-04
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH---EQAAAAELDD 515
           NRCQYCR +KC+A+GM R+AV+  R  +R K R    ++ +SS+      E+   AEL  
Sbjct: 185 NRCQYCRYQKCLAMGMKREAVQEER--QRGKDRNENEVESTSSANEDMPVERILEAELAV 242

Query: 516 APR 524
            P+
Sbjct: 243 EPK 245


>DQ303444-1|ABB96254.1|  452|Homo sapiens retinoid X receptor, alpha
           protein.
          Length = 452

 Score = 44.0 bits (99), Expect = 4e-04
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH---EQAAAAELDD 515
           NRCQYCR +KC+A+GM R+AV+  R  +R K R    ++ +SS+      E+   AEL  
Sbjct: 175 NRCQYCRYQKCLAMGMKREAVQEER--QRGKDRNENEVESTSSANEDMPVERILEAELAV 232

Query: 516 APR 524
            P+
Sbjct: 233 EPK 235


>BC110998-1|AAI10999.1|  462|Homo sapiens retinoid X receptor, alpha
           protein.
          Length = 462

 Score = 44.0 bits (99), Expect = 4e-04
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH---EQAAAAELDD 515
           NRCQYCR +KC+A+GM R+AV+  R  +R K R    ++ +SS+      E+   AEL  
Sbjct: 185 NRCQYCRYQKCLAMGMKREAVQEER--QRGKDRNENEVESTSSANEDMPVERILEAELAV 242

Query: 516 APR 524
            P+
Sbjct: 243 EPK 245


>BC063827-1|AAH63827.1|  516|Homo sapiens RXRA protein protein.
          Length = 516

 Score = 44.0 bits (99), Expect = 4e-04
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH---EQAAAAELDD 515
           NRCQYCR +KC+A+GM R+AV+  R  +R K R    ++ +SS+      E+   AEL  
Sbjct: 239 NRCQYCRYQKCLAMGMKREAVQEER--QRGKDRNENEVESTSSANEDMPVERILEAELAV 296

Query: 516 APR 524
            P+
Sbjct: 297 EPK 299


>AL669970-1|CAM45733.1|  462|Homo sapiens retinoid X receptor, alpha
           protein.
          Length = 462

 Score = 44.0 bits (99), Expect = 4e-04
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH---EQAAAAELDD 515
           NRCQYCR +KC+A+GM R+AV+  R  +R K R    ++ +SS+      E+   AEL  
Sbjct: 185 NRCQYCRYQKCLAMGMKREAVQEER--QRGKDRNENEVESTSSANEDMPVERILEAELAV 242

Query: 516 APR 524
            P+
Sbjct: 243 EPK 245


>AL354796-1|CAH70571.1|  462|Homo sapiens retinoid X receptor, alpha
           protein.
          Length = 462

 Score = 44.0 bits (99), Expect = 4e-04
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH---EQAAAAELDD 515
           NRCQYCR +KC+A+GM R+AV+  R  +R K R    ++ +SS+      E+   AEL  
Sbjct: 185 NRCQYCRYQKCLAMGMKREAVQEER--QRGKDRNENEVESTSSANEDMPVERILEAELAV 242

Query: 516 APR 524
            P+
Sbjct: 243 EPK 245


>U80802-1|AAB96828.1|  480|Homo sapiens orphan nuclear receptor GCNF
           protein.
          Length = 480

 Score = 43.6 bits (98), Expect = 6e-04
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           R  + V S    NRCQYCRL KC+ +GM+R A+R   +P
Sbjct: 98  RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 136


>U64876-1|AAB06335.1|  480|Homo sapiens nuclear orphan receptor
           protein.
          Length = 480

 Score = 43.6 bits (98), Expect = 6e-04
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           R  + V S    NRCQYCRL KC+ +GM+R A+R   +P
Sbjct: 98  RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 136


>S83309-1|AAB50876.1|  476|Homo sapiens germ cell nuclear factor
           protein.
          Length = 476

 Score = 43.6 bits (98), Expect = 6e-04
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           R  + V S    NRCQYCRL KC+ +GM+R A+R   +P
Sbjct: 94  RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 132


>BC030600-1|AAH30600.1|  475|Homo sapiens nuclear receptor subfamily
           6, group A, member 1 protein.
          Length = 475

 Score = 43.6 bits (98), Expect = 6e-04
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           R  + V S    NRCQYCRL KC+ +GM+R A+R   +P
Sbjct: 94  RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 132


>AL354979-4|CAI10960.1|  479|Homo sapiens nuclear receptor subfamily
           6, group A, member 1 protein.
          Length = 479

 Score = 43.6 bits (98), Expect = 6e-04
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           R  + V S    NRCQYCRL KC+ +GM+R A+R   +P
Sbjct: 98  RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 136


>AL354928-2|CAI39633.1|  479|Homo sapiens nuclear receptor subfamily
           6, group A, member 1 protein.
          Length = 479

 Score = 43.6 bits (98), Expect = 6e-04
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           R  + V S    NRCQYCRL KC+ +GM+R A+R   +P
Sbjct: 98  RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 136


>AL158075-1|CAI13577.1|  479|Homo sapiens nuclear receptor subfamily
           6, group A, member 1 protein.
          Length = 479

 Score = 43.6 bits (98), Expect = 6e-04
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           R  + V S    NRCQYCRL KC+ +GM+R A+R   +P
Sbjct: 98  RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 136


>AF004291-1|AAC52054.1|  454|Homo sapiens germ cell nuclear factor
           protein.
          Length = 454

 Score = 43.6 bits (98), Expect = 6e-04
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           R  + V S    NRCQYCRL KC+ +GM+R A+R   +P
Sbjct: 72  RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 110


>X63522-1|CAA45087.1|  533|Homo sapiens retinoic acid X receptor  b
           protein.
          Length = 533

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285


>M84820-1|AAA60293.1|  533|Homo sapiens retinoid X receptor beta
           protein.
          Length = 533

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285


>BT007280-1|AAP35944.1|  533|Homo sapiens retinoid X receptor, beta
           protein.
          Length = 533

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285


>BC001167-1|AAH01167.1|  533|Homo sapiens retinoid X receptor, beta
           protein.
          Length = 533

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285


>AL844527-9|CAI41836.2|  537|Homo sapiens retinoid X receptor, beta
           protein.
          Length = 537

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285


>AL844527-8|CAI41837.1|  533|Homo sapiens retinoid X receptor, beta
           protein.
          Length = 533

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285


>AL662824-21|CAI17612.2|  537|Homo sapiens retinoid X receptor, beta
           protein.
          Length = 537

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285


>AL662824-20|CAI17614.1|  533|Homo sapiens retinoid X receptor, beta
           protein.
          Length = 533

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285


>AL645940-7|CAI18064.2|  537|Homo sapiens retinoid X receptor, beta
           protein.
          Length = 537

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285


>AL645940-6|CAI18066.1|  533|Homo sapiens retinoid X receptor, beta
           protein.
          Length = 533

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285


>AL031228-14|CAI95622.1|  482|Homo sapiens retinoid X receptor, beta
           protein.
          Length = 482

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 204 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 234


>AL031228-13|CAA20239.1|  533|Homo sapiens retinoid X receptor, beta
           protein.
          Length = 533

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285


>AL031228-12|CAI95621.1|  262|Homo sapiens retinoid X receptor, beta
           protein.
          Length = 262

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 226 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 256


>AF120161-1|AAD13794.1|  533|Homo sapiens retinoic X receptor beta
           protein.
          Length = 533

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285


>AF065396-1|AAC18599.1|  533|Homo sapiens retinoic X receptor B
           protein.
          Length = 533

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285


>AB209244-1|BAD92481.1|  577|Homo sapiens retinoid X receptor, beta
           variant protein.
          Length = 577

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
           NRCQYCR +KC+A GM R+AV+  R   ++K
Sbjct: 295 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 325


>X99975-1|CAA68236.1|  480|Homo sapiens hRTR/hGCNF protein protein.
          Length = 480

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = +3

Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
           R  + V S    NRCQYCRL KC+ +GM+R  +R   +P
Sbjct: 98  RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKTIREDGMP 136


>X75918-1|CAA53518.1|  598|Homo sapiens NOT protein.
          Length = 598

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
           NRCQYCR +KC+AVGM ++ VR        GR+P + K+
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 351


>U10990-1|AAC50118.1|  596|Homo sapiens hTAK1 protein.
          Length = 596

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
           NRCQ+CRLKKC+ +GM  ++V+  R P   +REK    AA
Sbjct: 167 NRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPSNCAA 206



 Score = 30.3 bits (65), Expect = 5.9
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFF+RS+++ + Y  C  NQ C I + +R
Sbjct: 133 SCEGCKGFFKRSVRKNLTY-SCRSNQDCIINKHHR 166


>S77154-1|AAB33999.1|  535|Homo sapiens TINUR protein.
          Length = 535

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
           NRCQYCR +KC+AVGM ++ VR        GR+P + K+
Sbjct: 250 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 288


>L27586-1|AAA21474.1|  615|Homo sapiens TR4 orphan receptor protein.
          Length = 615

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
           NRCQ+CRLKKC+ +GM  ++V+  R P   +REK    AA
Sbjct: 186 NRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPSNCAA 225


>BC066890-1|AAH66890.1|  535|Homo sapiens nuclear receptor subfamily
           4, group A, member 2 protein.
          Length = 535

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
           NRCQYCR +KC+AVGM ++ VR        GR+P + K+
Sbjct: 250 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 288


>BC051670-1|AAH51670.1|  530|Homo sapiens NR2C2 protein protein.
          Length = 530

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
           NRCQ+CRLKKC+ +GM  ++V+  R P   +REK    AA
Sbjct: 186 NRCQFCRLKKCLEMGMKMESVQSKRKPFDVQREKPSNCAA 225



 Score = 30.3 bits (65), Expect = 5.9
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
           SC+  +GFF+RS+++ + Y  C  NQ C I + +R
Sbjct: 152 SCEGCKGFFKRSVRKNLTY-SCRSNQDCIINKHHR 185


>BC009288-1|AAH09288.1|  598|Homo sapiens nuclear receptor subfamily
           4, group A, member 2 protein.
          Length = 598

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
           NRCQYCR +KC+AVGM ++ VR        GR+P + K+
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 351


>AK223625-1|BAD97345.1|  598|Homo sapiens nuclear receptor subfamily
           4, group A, member 2 isoform a variant protein.
          Length = 598

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
           NRCQYCR +KC+AVGM ++ VR        GR+P + K+
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 351


>AC074099-1|AAY24203.1|  598|Homo sapiens unknown protein.
          Length = 598

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
           NRCQYCR +KC+AVGM ++ VR        GR+P + K+
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 351


>AB019433-1|BAA77328.1|  598|Homo sapiens T-cell nuclear receptor
           NOT (Nurr1) protein.
          Length = 598

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
           NRCQYCR +KC+AVGM ++ VR        GR+P + K+
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 351


>AB017586-1|BAA75666.1|  598|Homo sapiens Nurr1 protein.
          Length = 598

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
           NRCQYCR +KC+AVGM ++ VR        GR+P + K+
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 351


>Y13276-1|CAA73725.1|  385|Homo sapiens Tailless protein protein.
          Length = 385

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500
           N+C+ CRLKKC+ V M++DAV+  R P+    R   A+     ++ + + AH  +AA
Sbjct: 68  NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 124


>X89894-1|CAA61984.1|  443|Homo sapiens nuclear receptor protein.
          Length = 443

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
           NRCQYCR +KC++VGM ++ VR        GR+P + K+ +     Q S
Sbjct: 342 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 390


>U12767-1|AAB02581.1|  587|Homo sapiens mitogen induced nuclear
           orphan receptor protein.
          Length = 587

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
           NRCQYCR +KC++VGM ++ VR        GR+P + K+ +     Q S
Sbjct: 303 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 351


>S81243-1|AAB36006.1|  684|Homo sapiens CHN protein.
          Length = 684

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
           NRCQYCR +KC++VGM ++ VR        GR+P + K+ +     Q S
Sbjct: 400 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 448


>D85242-1|BAA31221.1|  143|Homo sapiens NOR-1 3'-variant protein.
          Length = 143

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
           NRCQYCR +KC++VGM ++ VR        GR+P + K+ +     Q S
Sbjct: 42  NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 90


>D78579-1|BAA11419.1|  626|Homo sapiens neuron derived orphan
           receptor protein.
          Length = 626

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
           NRCQYCR +KC++VGM ++ VR        GR+P + K+ +     Q S
Sbjct: 342 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 390


>D49728-1|BAA08565.1|  598|Homo sapiens DNA binding protein protein.
          Length = 598

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 27/72 (37%), Positives = 39/72 (54%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQ+CR +KC+AVGM ++ VR   + K  + R+       S  +    A+ A       
Sbjct: 317 NRCQFCRFQKCLAVGMVKEVVRTDSL-KGRRGRL------PSKPKQPPDASPA------N 363

Query: 525 LLARVVRAHLDT 560
           LL  +VRAHLD+
Sbjct: 364 LLTSLVRAHLDS 375


>BT007144-1|AAP35808.1|  598|Homo sapiens nuclear receptor subfamily
           4, group A, member 1 protein.
          Length = 598

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 27/72 (37%), Positives = 39/72 (54%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQ+CR +KC+AVGM ++ VR   + K  + R+       S  +    A+ A       
Sbjct: 317 NRCQFCRFQKCLAVGMVKEVVRTDSL-KGRRGRL------PSKPKQPPDASPA------N 363

Query: 525 LLARVVRAHLDT 560
           LL  +VRAHLD+
Sbjct: 364 LLTSLVRAHLDS 375


>BC028031-1|AAH28031.1|  385|Homo sapiens nuclear receptor subfamily
           2, group E, member 1 protein.
          Length = 385

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500
           N+C+ CRLKKC+ V M++DAV+  R P+    R   A+     ++ + + AH  +AA
Sbjct: 68  NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 124


>BC016147-1|AAH16147.1|  598|Homo sapiens nuclear receptor subfamily
           4, group A, member 1 protein.
          Length = 598

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 27/72 (37%), Positives = 39/72 (54%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQ+CR +KC+AVGM ++ VR   + K  + R+       S  +    A+ A       
Sbjct: 317 NRCQFCRFQKCLAVGMVKEVVRTDSL-KGRRGRL------PSKPKQPPDASPA------N 363

Query: 525 LLARVVRAHLDT 560
           LL  +VRAHLD+
Sbjct: 364 LLTSLVRAHLDS 375


>AL359710-3|CAI95139.1|  443|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 443

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
           NRCQYCR +KC++VGM ++ VR        GR+P + K+ +     Q S
Sbjct: 342 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 390


>AL359710-2|CAI95138.1|  626|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 626

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
           NRCQYCR +KC++VGM ++ VR        GR+P + K+ +     Q S
Sbjct: 342 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 390


>AL359710-1|CAM16648.1|  637|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 637

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
           NRCQYCR +KC++VGM ++ VR        GR+P + K+ +     Q S
Sbjct: 353 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 401


>AL358937-4|CAI95320.1|  626|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 626

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
           NRCQYCR +KC++VGM ++ VR        GR+P + K+ +     Q S
Sbjct: 342 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 390


>AL358937-3|CAM22558.1|  637|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 637

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
           NRCQYCR +KC++VGM ++ VR        GR+P + K+ +     Q S
Sbjct: 353 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 401


>AL078596-2|CAO03480.1|  422|Homo sapiens nuclear receptor subfamily
           2, group E, member 1 protein.
          Length = 422

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500
           N+C+ CRLKKC+ V M++DAV+  R P+    R   A+     ++ + + AH  +AA
Sbjct: 105 NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 161


>AL078596-1|CAB75626.1|  385|Homo sapiens nuclear receptor subfamily
           2, group E, member 1 protein.
          Length = 385

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500
           N+C+ CRLKKC+ V M++DAV+  R P+    R   A+     ++ + + AH  +AA
Sbjct: 68  NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 124


>AK131566-1|BAD18699.1|  652|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16818 fis, clone TRACH1000193, highly  similar
           to Orphan nuclear receptor HMR. ).
          Length = 652

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 27/72 (37%), Positives = 39/72 (54%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQ+CR +KC+AVGM ++ VR   + K  + R+       S  +    A+ A       
Sbjct: 371 NRCQFCRFQKCLAVGMVKEVVRTDSL-KGRRGRL------PSKPKQPPDASPA------N 417

Query: 525 LLARVVRAHLDT 560
           LL  +VRAHLD+
Sbjct: 418 LLTSLVRAHLDS 429


>AK131541-1|BAD18677.1|  422|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16774 fis, clone BRCAN2019772, highly  similar
           to Orphan nuclear receptor NR2E1. ).
          Length = 422

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500
           N+C+ CRLKKC+ V M++DAV+  R P+    R   A+     ++ + + AH  +AA
Sbjct: 105 NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 161


>AF411525-1|AAL05871.1|  385|Homo sapiens nuclear receptor subfamily
           2 group E member 1 protein.
          Length = 385

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500
           N+C+ CRLKKC+ V M++DAV+  R P+    R   A+     ++ + + AH  +AA
Sbjct: 68  NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 124


>AF220532-1|AAG31945.1|  385|Homo sapiens orphan nuclear receptor
           protein.
          Length = 385

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500
           N+C+ CRLKKC+ V M++DAV+  R P+    R   A+     ++ + + AH  +AA
Sbjct: 68  NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 124


>X55074-2|CAB57886.1|  490|Homo sapiens thyroid hormone receptor
           alpha 2 protein.
          Length = 490

 Score = 41.1 bits (92), Expect = 0.003
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +3

Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
           S  V   +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95  SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125


>X55074-1|CAA38899.1|  410|Homo sapiens thyroid hormone receptor
           alpha 1 protein.
          Length = 410

 Score = 41.1 bits (92), Expect = 0.003
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +3

Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
           S  V   +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95  SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125


>X55005-1|CAA38749.1|  410|Homo sapiens thyriod hormone receptor
           alpha 1, THRA1 protein.
          Length = 410

 Score = 41.1 bits (92), Expect = 0.003
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +3

Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
           S  V   +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95  SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125


>M24899-1|AAA35783.1|  490|Homo sapiens triiodothyronine receptor
           protein.
          Length = 490

 Score = 41.1 bits (92), Expect = 0.003
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +3

Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
           S  V   +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95  SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125


>M24748-2|AAA66021.1|  410|Homo sapiens thyroid receptor alpha-1
           protein.
          Length = 410

 Score = 41.1 bits (92), Expect = 0.003
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +3

Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
           S  V   +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95  SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125


>L13740-1|AAA36763.1|  598|Homo sapiens TR3 orphan receptor protein.
          Length = 598

 Score = 41.1 bits (92), Expect = 0.003
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQAAAAELDD 515
           NRCQ+CR +KC+AVGM ++ VR   + K  + R+ +  +Q   +S +        A LD 
Sbjct: 317 NRCQFCRFQKCLAVGMVKEVVRTDSL-KGRRGRLPSKPKQPPDASPANLLTSLVLAHLDS 375

Query: 516 AP 521
            P
Sbjct: 376 GP 377


>J03239-1|AAA61176.1|  490|Homo sapiens thyroid hormone receptor
           protein.
          Length = 490

 Score = 41.1 bits (92), Expect = 0.003
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +3

Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
           S  V   +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95  SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125


>CR541915-1|CAG46713.1|  410|Homo sapiens THRA protein.
          Length = 410

 Score = 41.1 bits (92), Expect = 0.003
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +3

Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
           S  V   +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95  SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125


>BC035137-1|AAH35137.1|  451|Homo sapiens THRA protein protein.
          Length = 451

 Score = 41.1 bits (92), Expect = 0.003
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +3

Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
           S  V   +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95  SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125


>BC008851-1|AAH08851.1|  410|Homo sapiens THRA protein protein.
          Length = 410

 Score = 41.1 bits (92), Expect = 0.003
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +3

Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
           S  V   +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95  SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125


>BC002728-1|AAH02728.1|  490|Homo sapiens thyroid hormone receptor,
           alpha (erythroblastic leukemia viral (v-erb-a) oncoge
           protein.
          Length = 490

 Score = 41.1 bits (92), Expect = 0.003
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +3

Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
           S  V   +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95  SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125


>BC000261-1|AAH00261.1|  490|Homo sapiens thyroid hormone receptor,
           alpha (erythroblastic leukemia viral (v-erb-a) oncoge
           protein.
          Length = 490

 Score = 41.1 bits (92), Expect = 0.003
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +3

Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
           S  V   +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95  SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125


>AB209346-1|BAD92583.1|  397|Homo sapiens thyroid hormone receptor,
           alpha isoform 1 variant protein.
          Length = 397

 Score = 41.1 bits (92), Expect = 0.003
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +3

Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
           S  V   +T N+CQ CR KKCIAVGM+ D V
Sbjct: 82  SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 112


>CR456704-1|CAG32985.1|  598|Homo sapiens NR4A1 protein.
          Length = 598

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 27/72 (37%), Positives = 38/72 (52%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
           NRCQ+CR +KC+AVGM ++ VR   + K  + R+       S  +    A  A       
Sbjct: 317 NRCQFCRFQKCLAVGMVKEVVRTDSL-KGRRGRL------PSKPKQPPDAFPA------N 363

Query: 525 LLARVVRAHLDT 560
           LL  +VRAHLD+
Sbjct: 364 LLTSLVRAHLDS 375


>Y00479-1|CAA68539.1|  490|Homo sapiens protein ( H.sapiens mRNA for
           thyroid hormone receptor. ).
          Length = 490

 Score = 38.7 bits (86), Expect = 0.017
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +3

Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
           S  V   +T N+CQ CR KKCIAV M+ D V
Sbjct: 95  SCCVIDKITRNQCQLCRFKKCIAVAMAMDLV 125


>X04707-1|CAA28412.1|  456|Homo sapiens put.thyroid hormone receptor
           protein.
          Length = 456

 Score = 38.3 bits (85), Expect = 0.022
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV--RFGRVPKR---EKARILAAMQQSSSSRAHEQAAA 500
           +T N+CQ CR KKCI VGM+ D V     R+ KR   E+ R     ++   S  H+    
Sbjct: 151 VTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEPT 210

Query: 501 AELDDAPRLLARVVRAHLDT 560
              D+   L+  V  AH+ T
Sbjct: 211 ---DEEWELIKTVTEAHVAT 227


>M26747-1|AAA35677.1|  456|Homo sapiens c-erbA protein.
          Length = 456

 Score = 38.3 bits (85), Expect = 0.022
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV--RFGRVPKR---EKARILAAMQQSSSSRAHEQAAA 500
           +T N+CQ CR KKCI VGM+ D V     R+ KR   E+ R     ++   S  H+    
Sbjct: 151 VTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEPT 210

Query: 501 AELDDAPRLLARVVRAHLDT 560
              D+   L+  V  AH+ T
Sbjct: 211 ---DEEWELIKTVTEAHVAT 227


>BC106930-1|AAI06931.1|  461|Homo sapiens THRB protein protein.
          Length = 461

 Score = 38.3 bits (85), Expect = 0.022
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV--RFGRVPKR---EKARILAAMQQSSSSRAHEQAAA 500
           +T N+CQ CR KKCI VGM+ D V     R+ KR   E+ R     ++   S  H+    
Sbjct: 156 VTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEPT 215

Query: 501 AELDDAPRLLARVVRAHLDT 560
              D+   L+  V  AH+ T
Sbjct: 216 ---DEEWELIKTVTEAHVAT 232


>BC106929-1|AAI06930.1|  461|Homo sapiens thyroid hormone receptor,
           beta (erythroblastic leukemia viral (v-erb-a) oncogen
           protein.
          Length = 461

 Score = 38.3 bits (85), Expect = 0.022
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
 Frame = +3

Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV--RFGRVPKR---EKARILAAMQQSSSSRAHEQAAA 500
           +T N+CQ CR KKCI VGM+ D V     R+ KR   E+ R     ++   S  H+    
Sbjct: 156 VTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEPT 215

Query: 501 AELDDAPRLLARVVRAHLDT 560
              D+   L+  V  AH+ T
Sbjct: 216 ---DEEWELIKTVTEAHVAT 232


>Z49825-1|CAA89989.1|  504|Homo sapiens hepatocyte nuclear factor 4
           alpha (HNF4alpha4) protein.
          Length = 504

 Score = 37.9 bits (84), Expect = 0.029
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 140 NQCRYCRLKKCFRAGMKKEAVQ 161



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
           SCD  +GFFRRS+++   Y  C  ++QC + +  R        +K  R   ++      R
Sbjct: 106 SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 164

Query: 416 SCTQTRESAYPRS 454
               TR S+Y  S
Sbjct: 165 DRISTRRSSYEDS 177


>X87872-1|CAA61135.1|  408|Homo sapiens Hepatocyte nuclear factor 4C
           protein.
          Length = 408

 Score = 37.9 bits (84), Expect = 0.029
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 101 NQCRYCRLKKCFRAGMKKEAVQ 122



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
           SCD  +GFFRRS+++   Y  C  ++QC + +  R        +K  R   ++      R
Sbjct: 67  SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 125

Query: 416 SCTQTRESAYPRS 454
               TR S+Y  S
Sbjct: 126 DRISTRRSSYEDS 138


>X87871-1|CAA61134.1|  465|Homo sapiens Hepatocyte nuclear factor 4B
           protein.
          Length = 465

 Score = 37.9 bits (84), Expect = 0.029
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 101 NQCRYCRLKKCFRAGMKKEAVQ 122



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
           SCD  +GFFRRS+++   Y  C  ++QC + +  R        +K  R   ++      R
Sbjct: 67  SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 125

Query: 416 SCTQTRESAYPRS 454
               TR S+Y  S
Sbjct: 126 DRISTRRSSYEDS 138


>X87870-1|CAA61133.1|  455|Homo sapiens Hepatocyte nuclear factor 4A
           protein.
          Length = 455

 Score = 37.9 bits (84), Expect = 0.029
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 101 NQCRYCRLKKCFRAGMKKEAVQ 122



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
           SCD  +GFFRRS+++   Y  C  ++QC + +  R        +K  R   ++      R
Sbjct: 67  SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 125

Query: 416 SCTQTRESAYPRS 454
               TR S+Y  S
Sbjct: 126 DRISTRRSSYEDS 138


>X76930-1|CAA54248.1|  465|Homo sapiens hepatocyte nuclear factor 4
           protein.
          Length = 465

 Score = 37.9 bits (84), Expect = 0.029
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 101 NQCRYCRLKKCFRAGMKKEAVQ 122



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
           SCD  +GFFRRS+++   Y  C  ++QC + +  R        +K  R   ++      R
Sbjct: 67  SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 125

Query: 416 SCTQTRESAYPRS 454
               TR S+Y  S
Sbjct: 126 DRISTRRSSYEDS 138


>U72969-1|AAB48082.1|  516|Homo sapiens hepatocyte nuclear factor
           4-alpha protein.
          Length = 516

 Score = 37.9 bits (84), Expect = 0.029
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 152 NQCRYCRLKKCFRAGMKKEAVQ 173



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
           SCD  +GFFRRS+++   Y  C  ++QC + +  R        +K  R   ++      R
Sbjct: 118 SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 176

Query: 416 SCTQTRESAYPRS 454
               TR S+Y  S
Sbjct: 177 DRISTRRSSYEDS 189


>U72967-1|AAB48083.1|  408|Homo sapiens hepatocyte nuclear factor
           4-alpha protein.
          Length = 408

 Score = 37.9 bits (84), Expect = 0.029
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 101 NQCRYCRLKKCFRAGMKKEAVQ 122



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
           SCD  +GFFRRS+++   Y  C  ++QC + +  R        +K  R   ++      R
Sbjct: 67  SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 125

Query: 416 SCTQTRESAYPRS 454
               TR S+Y  S
Sbjct: 126 DRISTRRSSYEDS 138


>EF591040-1|ABQ52204.1|  474|Homo sapiens hepatocyte nuclear factor
           4, alpha protein.
          Length = 474

 Score = 37.9 bits (84), Expect = 0.029
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
           SCD  +GFFRRS+++   Y  C  ++QC + +  R        +K  R   ++      R
Sbjct: 76  SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 134

Query: 416 SCTQTRESAYPRS 454
               TR S+Y  S
Sbjct: 135 DRISTRRSSYEDS 147


>DQ356894-1|ABC97372.1|  186|Homo sapiens peroxisome proliferative
           acitvated receptor gamma protein.
          Length = 186

 Score = 37.9 bits (84), Expect = 0.029
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRD 401
           N+CQYCR +KC+AVGMS +
Sbjct: 160 NKCQYCRFQKCLAVGMSHN 178


>AY680698-1|AAT91239.1|  395|Homo sapiens hepatocyte nuclear factor
           4 alpha, transcript variant 9 protein.
          Length = 395

 Score = 37.9 bits (84), Expect = 0.029
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 88  NQCRYCRLKKCFRAGMKKEAVQ 109



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
           SCD  +GFFRRS+++   Y  C  ++QC + +  R        +K  R   ++      R
Sbjct: 54  SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 112

Query: 416 SCTQTRESAYPRS 454
               TR S+Y  S
Sbjct: 113 DRISTRRSSYEDS 125


>AY680697-1|AAT91238.1|  452|Homo sapiens hepatocyte nuclear factor
           4 alpha, transcript variant 8 protein.
          Length = 452

 Score = 37.9 bits (84), Expect = 0.029
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 88  NQCRYCRLKKCFRAGMKKEAVQ 109



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
           SCD  +GFFRRS+++   Y  C  ++QC + +  R        +K  R   ++      R
Sbjct: 54  SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 112

Query: 416 SCTQTRESAYPRS 454
               TR S+Y  S
Sbjct: 113 DRISTRRSSYEDS 125


>AY680696-1|AAT91237.1|  442|Homo sapiens hepatocyte nuclear factor
           4 alpha, transcript variant 7 protein.
          Length = 442

 Score = 37.9 bits (84), Expect = 0.029
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 88  NQCRYCRLKKCFRAGMKKEAVQ 109



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
           SCD  +GFFRRS+++   Y  C  ++QC + +  R        +K  R   ++      R
Sbjct: 54  SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 112

Query: 416 SCTQTRESAYPRS 454
               TR S+Y  S
Sbjct: 113 DRISTRRSSYEDS 125


>AL132772-3|CAI18857.1|  467|Homo sapiens hepatocyte nuclear factor
           4, alpha protein.
          Length = 467

 Score = 37.9 bits (84), Expect = 0.029
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 103 NQCRYCRLKKCFRAGMKKEAVQ 124



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
           SCD  +GFFRRS+++   Y  C  ++QC + +  R        +K  R   ++      R
Sbjct: 69  SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 127

Query: 416 SCTQTRESAYPRS 454
               TR S+Y  S
Sbjct: 128 DRISTRRSSYEDS 140


>AL132772-2|CAC01303.1|  474|Homo sapiens hepatocyte nuclear factor
           4, alpha protein.
          Length = 474

 Score = 37.9 bits (84), Expect = 0.029
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
           SCD  +GFFRRS+++   Y  C  ++QC + +  R        +K  R   ++      R
Sbjct: 76  SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 134

Query: 416 SCTQTRESAYPRS 454
               TR S+Y  S
Sbjct: 135 DRISTRRSSYEDS 147


>AL132772-1|CAI18856.1|  417|Homo sapiens hepatocyte nuclear factor
           4, alpha protein.
          Length = 417

 Score = 37.9 bits (84), Expect = 0.029
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRLKKC   GM ++AV+
Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +2

Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
           SCD  +GFFRRS+++   Y  C  ++QC + +  R        +K  R   ++      R
Sbjct: 76  SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 134

Query: 416 SCTQTRESAYPRS 454
               TR S+Y  S
Sbjct: 135 DRISTRRSSYEDS 147


>U93553-1|AAD03155.1|  500|Homo sapiens alpha1-fetoprotein
           transcription factor protein.
          Length = 500

 Score = 37.5 bits (83), Expect = 0.039
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC YCR +KC++VGM  +AVR  R+
Sbjct: 97  RCPYCRFQKCLSVGMKLEAVRADRM 121



 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q   +Y  C +NQ C I +  R+  P    +K
Sbjct: 67  KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 105


>U80251-1|AAC78727.1|  495|Homo sapiens hepatocytic transcription
           factor protein.
          Length = 495

 Score = 37.5 bits (83), Expect = 0.039
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC YCR +KC++VGM  +AVR  R+
Sbjct: 91  RCPYCRFQKCLSVGMKLEAVRADRM 115



 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q   +Y  C +NQ C I +  R+  P    +K
Sbjct: 61  KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 99


>D88155-1|BAA13546.1|  461|Homo sapiens AdBP4 protein.
          Length = 461

 Score = 37.5 bits (83), Expect = 0.039
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRV 422
           NRC +CR +KC+ VGM  +AVR  R+
Sbjct: 63  NRCPFCRFQKCLTVGMRLEAVRADRM 88



 Score = 31.9 bits (69), Expect = 1.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q    Y  CT++Q C I +  R   P    +K
Sbjct: 34  KGFFKRTVQNNKHYT-CTESQSCKIDKTQRNRCPFCRFQK 72


>BC118652-1|AAI18653.1|  495|Homo sapiens nuclear receptor subfamily
           5, group A, member 2 protein.
          Length = 495

 Score = 37.5 bits (83), Expect = 0.039
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC YCR +KC++VGM  +AVR  R+
Sbjct: 91  RCPYCRFQKCLSVGMKLEAVRADRM 115



 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q   +Y  C +NQ C I +  R+  P    +K
Sbjct: 61  KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 99


>BC118571-1|AAI18572.1|  495|Homo sapiens nuclear receptor subfamily
           5, group A, member 2 protein.
          Length = 495

 Score = 37.5 bits (83), Expect = 0.039
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC YCR +KC++VGM  +AVR  R+
Sbjct: 91  RCPYCRFQKCLSVGMKLEAVRADRM 115



 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q   +Y  C +NQ C I +  R+  P    +K
Sbjct: 61  KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 99


>AF190464-2|AAG17124.1|  495|Homo sapiens hepatocytic transcription
           factor B1F protein.
          Length = 495

 Score = 37.5 bits (83), Expect = 0.039
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC YCR +KC++VGM  +AVR  R+
Sbjct: 91  RCPYCRFQKCLSVGMKLEAVRADRM 115



 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q   +Y  C +NQ C I +  R+  P    +K
Sbjct: 61  KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 99


>AF190464-1|AAG17125.1|  541|Homo sapiens hepatocytic transcription
           factor isoform B1F-2 protein.
          Length = 541

 Score = 37.5 bits (83), Expect = 0.039
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC YCR +KC++VGM  +AVR  R+
Sbjct: 137 RCPYCRFQKCLSVGMKLEAVRADRM 161



 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q   +Y  C +NQ C I +  R+  P    +K
Sbjct: 107 KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 145


>AF146343-1|AAD37378.1|  495|Homo sapiens CYP7A promoter binding
           factor protein.
          Length = 495

 Score = 37.5 bits (83), Expect = 0.039
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC YCR +KC++VGM  +AVR  R+
Sbjct: 91  RCPYCRFQKCLSVGMKLEAVRADRM 115



 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q   +Y  C +NQ C I +  R+  P    +K
Sbjct: 61  KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 99


>AF124247-1|AAD26565.1|  541|Homo sapiens hepatocytic transcription
           factor hB1F-2 protein.
          Length = 541

 Score = 37.5 bits (83), Expect = 0.039
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC YCR +KC++VGM  +AVR  R+
Sbjct: 137 RCPYCRFQKCLSVGMKLEAVRADRM 161



 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q   +Y  C +NQ C I +  R+  P    +K
Sbjct: 107 KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 145


>AF049102-1|AAD03248.1|  323|Homo sapiens alpha1-fetoprotein
           transcription factor short variant protein.
          Length = 323

 Score = 37.5 bits (83), Expect = 0.039
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC YCR +KC++VGM  +AVR  R+
Sbjct: 57  RCPYCRFQKCLSVGMKLEAVRADRM 81



 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q   +Y  C +NQ C I +  R+  P    +K
Sbjct: 27  KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 65


>AB019246-1|BAA34092.1|  541|Homo sapiens FTZ-F1 related protein
           protein.
          Length = 541

 Score = 37.5 bits (83), Expect = 0.039
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC YCR +KC++VGM  +AVR  R+
Sbjct: 137 RCPYCRFQKCLSVGMKLEAVRADRM 161



 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q   +Y  C +NQ C I +  R+  P    +K
Sbjct: 107 KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 145


>Z49826-1|CAA89990.2|  408|Homo sapiens hepatocyte nuclear factor 4
           gamma (HNF4gamma) protein.
          Length = 408

 Score = 36.7 bits (81), Expect = 0.068
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRL+KC   GM ++AV+
Sbjct: 62  NQCRYCRLRKCFRAGMKKEAVQ 83


>BC105011-1|AAI05012.1|  408|Homo sapiens HNF4G protein protein.
          Length = 408

 Score = 36.7 bits (81), Expect = 0.068
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRL+KC   GM ++AV+
Sbjct: 62  NQCRYCRLRKCFRAGMKKEAVQ 83


>BC105009-1|AAI05010.1|  408|Homo sapiens HNF4G protein protein.
          Length = 408

 Score = 36.7 bits (81), Expect = 0.068
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRL+KC   GM ++AV+
Sbjct: 62  NQCRYCRLRKCFRAGMKKEAVQ 83


>AF133504-1|AAF00110.1|  408|Homo sapiens hepatocyte nuclear factor
           4 gamma protein.
          Length = 408

 Score = 36.7 bits (81), Expect = 0.068
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRL+KC   GM ++AV+
Sbjct: 62  NQCRYCRLRKCFRAGMKKEAVQ 83


>CR542091-1|CAG46888.1|  408|Homo sapiens HNF4G protein.
          Length = 408

 Score = 35.5 bits (78), Expect = 0.16
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
           N+C+YCRL+KC   GM + AV+
Sbjct: 62  NQCRYCRLRKCFRAGMKKKAVQ 83


>U76388-1|AAB53105.1|  461|Homo sapiens steroidogenic factor 1
           protein.
          Length = 461

 Score = 35.1 bits (77), Expect = 0.21
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC +CR +KC+ VGM  +AVR  R+
Sbjct: 64  RCPFCRFQKCLTVGMRLEAVRADRM 88



 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q    Y  CT++Q C I +  R+  P    +K
Sbjct: 34  KGFFKRTVQNNKHYT-CTESQSCKIDKTQRKRCPFCRFQK 72


>BC032501-1|AAH32501.1|  461|Homo sapiens nuclear receptor subfamily
           5, group A, member 1 protein.
          Length = 461

 Score = 35.1 bits (77), Expect = 0.21
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC +CR +KC+ VGM  +AVR  R+
Sbjct: 64  RCPFCRFQKCLTVGMRLEAVRADRM 88



 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q    Y  CT++Q C I +  R+  P    +K
Sbjct: 34  KGFFKRTVQNNKHYT-CTESQSCKIDKTQRKRCPFCRFQK 72


>AL354979-3|CAI10959.1|  461|Homo sapiens nuclear receptor subfamily
           5, group A, member 1 protein.
          Length = 461

 Score = 35.1 bits (77), Expect = 0.21
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC +CR +KC+ VGM  +AVR  R+
Sbjct: 64  RCPFCRFQKCLTVGMRLEAVRADRM 88



 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q    Y  CT++Q C I +  R+  P    +K
Sbjct: 34  KGFFKRTVQNNKHYT-CTESQSCKIDKTQRKRCPFCRFQK 72


>AL354979-2|CAI10958.1|  178|Homo sapiens nuclear receptor subfamily
           5, group A, member 1 protein.
          Length = 178

 Score = 35.1 bits (77), Expect = 0.21
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC +CR +KC+ VGM  +AVR  R+
Sbjct: 64  RCPFCRFQKCLTVGMRLEAVRADRM 88



 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q    Y  CT++Q C I +  R+  P    +K
Sbjct: 34  KGFFKRTVQNNKHYT-CTESQSCKIDKTQRKRCPFCRFQK 72


>AL137846-2|CAI10872.1|  461|Homo sapiens nuclear receptor subfamily
           5, group A, member 1 protein.
          Length = 461

 Score = 35.1 bits (77), Expect = 0.21
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
           RC +CR +KC+ VGM  +AVR  R+
Sbjct: 64  RCPFCRFQKCLTVGMRLEAVRADRM 88



 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
           +GFF+R++Q    Y  CT++Q C I +  R+  P    +K
Sbjct: 34  KGFFKRTVQNNKHYT-CTESQSCKIDKTQRKRCPFCRFQK 72


>X67482-1|CAA47824.1|  427|Homo sapiens HL-60 1,25-dihydroxyvitamin
           D-3  receptor protein.
          Length = 427

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 17/70 (24%), Positives = 37/70 (52%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
           CQ CRLK+C+ +GM ++ +      +R++  IL   ++ +   +     +   ++  R++
Sbjct: 76  CQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSLRPKLS---EEQQRII 132

Query: 531 ARVVRAHLDT 560
           A ++ AH  T
Sbjct: 133 AILLDAHHKT 142


>J03258-1|AAA61273.1|  427|Homo sapiens VDR protein.
          Length = 427

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 17/70 (24%), Positives = 37/70 (52%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
           CQ CRLK+C+ +GM ++ +      +R++  IL   ++ +   +     +   ++  R++
Sbjct: 76  CQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSLRPKLS---EEQQRII 132

Query: 531 ARVVRAHLDT 560
           A ++ AH  T
Sbjct: 133 AILLDAHHKT 142


>BC060832-1|AAH60832.1|  427|Homo sapiens VDR protein protein.
          Length = 427

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 17/70 (24%), Positives = 37/70 (52%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
           CQ CRLK+C+ +GM ++ +      +R++  IL   ++ +   +     +   ++  R++
Sbjct: 76  CQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSLRPKLS---EEQQRII 132

Query: 531 ARVVRAHLDT 560
           A ++ AH  T
Sbjct: 133 AILLDAHHKT 142


>AY342401-1|AAP88938.1|  424|Homo sapiens vitamin D
           (1,25-dihydroxyvitamin D3) receptor protein.
          Length = 424

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 17/70 (24%), Positives = 37/70 (52%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
           CQ CRLK+C+ +GM ++ +      +R++  IL   ++ +   +     +   ++  R++
Sbjct: 73  CQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSLRPKLS---EEQQRII 129

Query: 531 ARVVRAHLDT 560
           A ++ AH  T
Sbjct: 130 AILLDAHHKT 139


>AF026260-1|AAB95155.1|  427|Homo sapiens vitamin D receptor
           protein.
          Length = 427

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 17/70 (24%), Positives = 37/70 (52%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
           CQ CRLK+C+ +GM ++ +      +R++  IL   ++ +   +     +   ++  R++
Sbjct: 76  CQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSLRPKLS---EEQQRII 132

Query: 531 ARVVRAHLDT 560
           A ++ AH  T
Sbjct: 133 AILLDAHHKT 142


>AB002168-1|BAA83389.1|  427|Homo sapiens vitamin D receptor
           protein.
          Length = 427

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 17/70 (24%), Positives = 37/70 (52%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
           CQ CRLK+C+ +GM ++ +      +R++  IL   ++ +   +     +   ++  R++
Sbjct: 76  CQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSLRPKLS---EEQQRII 132

Query: 531 ARVVRAHLDT 560
           A ++ AH  T
Sbjct: 133 AILLDAHHKT 142


>X51417-1|CAA35779.1|  433|Homo sapiens protein ( Human mRNA for
           steroid hormone receptor hERR2. ).
          Length = 433

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
           CQ CR  KC+ VGM ++ VR  RV
Sbjct: 155 CQACRFMKCLKVGMLKEGVRLDRV 178


>X51416-1|CAA35778.1|  521|Homo sapiens protein ( Human mRNA for
           steroid hormone receptor hERR1. ).
          Length = 521

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
           CQ CR  KC+ VGM ++ VR  RV
Sbjct: 228 CQACRFTKCLRVGMLKEGVRLDRV 251


>L38487-1|AAB17015.1|  481|Homo sapiens estrogen receptor-related
           protein protein.
          Length = 481

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
           CQ CR  KC+ VGM ++ VR  RV
Sbjct: 190 CQACRFTKCLRVGMLKEGVRLDRV 213


>DQ514553-1|ABF47104.1|  423|Homo sapiens estrogen-related receptor
           alpha protein.
          Length = 423

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
           CQ CR  KC+ VGM ++ VR  RV
Sbjct: 131 CQACRFTKCLRVGMLKEGVRLDRV 154


>BT019411-1|AAV38218.1|  447|Homo sapiens nuclear receptor subfamily
           1, group H, member 3 protein.
          Length = 447

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = +3

Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRL 527
           +CQ CRL+KC   GM  + V        E+ R L  +++    +AH  +        P++
Sbjct: 149 KCQECRLRKCRQAGMREECVL-----SEEQIR-LKKLKRQEEEQAHATSLPPRASSPPQI 202

Query: 528 LARVVRAHLDTCE 566
           L ++ R  L   E
Sbjct: 203 LPQLSREQLGMIE 215


>BC131517-1|AAI31518.1|  503|Homo sapiens ESRRB protein protein.
          Length = 503

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
           CQ CR  KC+ VGM ++ VR  RV
Sbjct: 155 CQACRFMKCLKVGMLKEGVRLDRV 178


>BC093722-1|AAH93722.1|  423|Homo sapiens estrogen-related receptor
           alpha protein.
          Length = 423

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
           CQ CR  KC+ VGM ++ VR  RV
Sbjct: 131 CQACRFTKCLRVGMLKEGVRLDRV 154


>BC093720-1|AAH93720.1|  423|Homo sapiens estrogen-related receptor
           alpha protein.
          Length = 423

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
           CQ CR  KC+ VGM ++ VR  RV
Sbjct: 131 CQACRFTKCLRVGMLKEGVRLDRV 154


>BC092470-1|AAH92470.1|  423|Homo sapiens ESRRA protein protein.
          Length = 423

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
           CQ CR  KC+ VGM ++ VR  RV
Sbjct: 131 CQACRFTKCLRVGMLKEGVRLDRV 154


>BC064700-1|AAH64700.1|  442|Homo sapiens ESRRG protein protein.
          Length = 442

 Score = 33.9 bits (74), Expect = 0.48
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
           CQ CR  KC+ VGM ++ VR  RV
Sbjct: 157 CQACRFMKCLKVGMLKEGVRLDRV 180


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,287,441
Number of Sequences: 237096
Number of extensions: 1464914
Number of successful extensions: 4608
Number of sequences better than 10.0: 315
Number of HSP's better than 10.0 without gapping: 4201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4608
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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