Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0965
(629 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72631-1|CAB53540.1| 614|Homo sapiens Rev-ErbAalpha protein pro... 77 4e-14
M24898-1|AAA52335.1| 614|Homo sapiens triiodothyronine receptor... 77 4e-14
BC056148-1|AAH56148.1| 614|Homo sapiens nuclear receptor subfam... 77 4e-14
BC047875-1|AAH47875.1| 614|Homo sapiens nuclear receptor subfam... 77 4e-14
L31785-1|AAA65937.1| 579|Homo sapiens orphan nuclear hormone re... 73 6e-13
D16815-1|BAA20088.1| 579|Homo sapiens EAR-1r protein. 73 6e-13
CR457434-1|CAG33715.1| 579|Homo sapiens NR1D2 protein. 73 6e-13
BC070035-1|AAH70035.1| 408|Homo sapiens NR1D2 protein protein. 73 6e-13
BC045613-1|AAH45613.1| 579|Homo sapiens nuclear receptor subfam... 73 6e-13
AB209091-1|BAD92328.1| 549|Homo sapiens Orphan nuclear receptor... 73 6e-13
L07592-1|AAA36469.1| 441|Homo sapiens peroxisome proliferator a... 64 4e-10
BC007578-1|AAH07578.1| 361|Homo sapiens PPARD protein protein. 64 4e-10
BC002715-1|AAH02715.1| 361|Homo sapiens PPARD protein protein. 64 4e-10
AY919140-1|AAX14041.1| 441|Homo sapiens peroxisome proliferator... 64 4e-10
AY442342-1|AAR05439.1| 441|Homo sapiens peroxisome proliferativ... 64 4e-10
AL022721-9|CAD92505.1| 361|Homo sapiens peroxisome proliferativ... 64 4e-10
AL022721-8|CAB38629.1| 441|Homo sapiens peroxisome proliferativ... 64 4e-10
AF246303-1|AAF62553.1| 441|Homo sapiens peroxisome proliferativ... 64 4e-10
U16997-1|AAA64751.1| 560|Homo sapiens ROR gamma protein. 63 9e-10
CR457436-1|CAG33717.1| 518|Homo sapiens RORC protein. 63 9e-10
BC110571-1|AAI10572.1| 518|Homo sapiens RAR-related orphan rece... 63 9e-10
BC031554-1|AAH31554.1| 518|Homo sapiens RAR-related orphan rece... 63 9e-10
AL589765-18|CAI17180.1| 518|Homo sapiens RAR-related orphan rec... 63 9e-10
AL589765-17|CAI17179.1| 497|Homo sapiens RAR-related orphan rec... 63 9e-10
AK223137-1|BAD96857.1| 518|Homo sapiens RAR-related orphan rece... 63 9e-10
U04899-1|AAA62660.1| 548|Homo sapiens RORalpha3 protein. 62 1e-09
U04898-1|AAA62659.1| 556|Homo sapiens RORalpha2 protein. 62 1e-09
U04897-1|AAA62658.1| 523|Homo sapiens RORalpha1 protein. 62 1e-09
L14611-1|AAA02963.1| 468|Homo sapiens transcription factor prot... 62 1e-09
BC100990-1|AAI00991.1| 468|Homo sapiens RAR-related orphan rece... 62 1e-09
BC100989-1|AAI00990.1| 468|Homo sapiens RAR-related orphan rece... 62 1e-09
BC100988-1|AAI00989.1| 468|Homo sapiens RAR-related orphan rece... 62 1e-09
BC100987-1|AAI00988.1| 468|Homo sapiens RAR-related orphan rece... 62 1e-09
BC008831-1|AAH08831.1| 523|Homo sapiens RAR-related orphan rece... 62 1e-09
Y08639-1|CAA69929.1| 459|Homo sapiens nuclear orphan receptor R... 62 2e-09
X90563-2|CAA62153.1| 475|Homo sapiens peroxisome proliferator a... 62 2e-09
X90563-1|CAA62152.1| 477|Homo sapiens peroxisome proliferator a... 62 2e-09
U79012-1|AAC51248.1| 505|Homo sapiens ligand activated transcri... 62 2e-09
U63415-1|AAB04028.1| 505|Homo sapiens peroxisome proliferator a... 62 2e-09
L40904-1|AAA80314.2| 477|Homo sapiens peroxisome proliferator a... 62 2e-09
BT007281-1|AAP35945.1| 477|Homo sapiens peroxisome proliferativ... 62 2e-09
BC006811-1|AAH06811.1| 477|Homo sapiens peroxisome proliferator... 62 2e-09
AY222643-1|AAO66458.1| 584|Homo sapiens CREB3L2-PPARgamma protein. 62 2e-09
AY157024-1|AAN38992.2| 475|Homo sapiens peroxisome proliferativ... 62 2e-09
AK223528-1|BAD97248.1| 478|Homo sapiens peroxisome proliferativ... 62 2e-09
AJ698135-1|CAG29019.1| 248|Homo sapiens peroxisome proliferativ... 62 2e-09
AJ563370-1|CAD91389.1| 264|Homo sapiens peroxisome proliferativ... 62 2e-09
AJ563369-1|CAD91388.1| 280|Homo sapiens peroxisome proliferativ... 62 2e-09
AB005526-1|BAA23354.1| 474|Homo sapiens peroxisome proliferator... 62 2e-09
BC093774-1|AAH93774.1| 459|Homo sapiens RAR-related orphan rece... 61 4e-09
BC093772-1|AAH93772.1| 459|Homo sapiens RAR-related orphan rece... 61 4e-09
BC051830-1|AAH51830.1| 459|Homo sapiens RAR-related orphan rece... 61 4e-09
AL355674-1|CAD13280.2| 459|Homo sapiens RAR-related orphan rece... 61 4e-09
AL137018-1|CAD13276.2| 459|Homo sapiens RAR-related orphan rece... 61 4e-09
AB099507-1|BAC78903.1| 161|Homo sapiens peroxisome proliferativ... 60 8e-09
Y07619-1|CAA68898.1| 468|Homo sapiens peroxisome proliferator-a... 59 1e-08
S74349-1|AAB32649.1| 468|Homo sapiens peroxisome proliferator a... 59 1e-08
L02932-1|AAA36468.1| 468|Homo sapiens peroxisome proliferator a... 59 1e-08
D83233-1|BAA18949.1| 506|Homo sapiens PPAR gamma2 protein. 59 1e-08
CR457435-1|CAG33716.1| 468|Homo sapiens PPARA protein. 59 1e-08
CR456547-1|CAG30433.1| 468|Homo sapiens PPARA protein. 59 1e-08
BC000052-1|AAH00052.1| 258|Homo sapiens peroxisome proliferator... 59 1e-08
AY206718-1|AAO13489.1| 468|Homo sapiens peroxisome proliferativ... 59 1e-08
AL078611-2|CAI18764.1| 468|Homo sapiens peroxisome proliferativ... 59 1e-08
AL049856-1|CAI22450.1| 468|Homo sapiens peroxisome proliferativ... 59 1e-08
Y00291-1|CAA68398.1| 448|Homo sapiens protein ( Human hap mRNA ... 52 1e-06
X07282-1|CAA30262.1| 448|Homo sapiens protein ( Human mRNA for ... 52 1e-06
DQ083391-1|AAZ32403.1| 184|Homo sapiens retinoic acid receptor ... 52 1e-06
CR536558-1|CAG38795.1| 336|Homo sapiens RARB protein. 52 1e-06
BC060794-1|AAH60794.1| 448|Homo sapiens retinoic acid receptor,... 52 1e-06
BC050415-1|AAH50415.2| 346|Homo sapiens RARB protein protein. 52 1e-06
AY501390-1|AAS85757.1| 336|Homo sapiens retinoic acid receptor ... 52 1e-06
AF157483-1|AAD45688.1| 336|Homo sapiens retinoic acid receptor ... 52 1e-06
X12794-1|CAA31282.1| 403|Homo sapiens protein ( Human v-erbA re... 51 3e-06
M57707-1|AAA63254.1| 454|Homo sapiens retinoic acid receptor-ga... 51 3e-06
M38258-1|AAA60254.1| 454|Homo sapiens retinoic acid receptor-ga... 51 3e-06
M24857-1|AAA52692.1| 454|Homo sapiens RARG protein. 51 3e-06
BC093729-1|AAH93729.1| 454|Homo sapiens retinoic acid receptor,... 51 3e-06
BC093727-1|AAH93727.1| 454|Homo sapiens retinoic acid receptor,... 51 3e-06
BC084544-1|AAH84544.2| 404|Homo sapiens nuclear receptor subfam... 51 3e-06
BC063018-1|AAH63018.2| 404|Homo sapiens nuclear receptor subfam... 51 3e-06
BC002669-1|AAH02669.3| 404|Homo sapiens nuclear receptor subfam... 51 3e-06
AJ250835-1|CAB60726.1| 381|Homo sapiens retinoic acid receptor ... 51 3e-06
AY013703-1|AAG41594.2| 58|Homo sapiens retinoic acid receptor ... 50 5e-06
U60477-1|AAB09475.1| 414|Homo sapiens apoliprotein AI regulator... 50 9e-06
M64497-1|AAA86429.1| 414|Homo sapiens apolipoprotein AI regulat... 50 9e-06
M62760-1|AAA21479.1| 351|Homo sapiens ovalbumin upstream promot... 50 9e-06
BC042897-1|AAH42897.1| 414|Homo sapiens nuclear receptor subfam... 50 9e-06
BC014664-1|AAH14664.1| 414|Homo sapiens nuclear receptor subfam... 50 9e-06
X16155-1|CAA34277.1| 418|Homo sapiens COUP-TF protein. 49 1e-05
X12795-1|CAA31283.1| 423|Homo sapiens protein ( Human v-erbA re... 49 1e-05
BC017493-1|AAH17493.1| 423|Homo sapiens nuclear receptor subfam... 49 1e-05
BC004154-1|AAH04154.1| 423|Homo sapiens nuclear receptor subfam... 49 1e-05
X06614-1|CAA29829.1| 462|Homo sapiens protein ( Human mRNA for ... 49 2e-05
X06538-1|CAA29787.1| 432|Homo sapiens protein ( Human mRNA for ... 49 2e-05
U41743-1|AAB00113.1| 520|Homo sapiens nucleophosmin-retinoic ac... 49 2e-05
U41742-1|AAB00112.1| 563|Homo sapiens nucleophosmin-retinoic ac... 49 2e-05
S50916-1|AAB19602.2| 416|Homo sapiens retinoic acid receptor al... 49 2e-05
M73779-1|AAA60126.1| 797|Homo sapiens PML-RAR protein protein. 49 2e-05
CR457438-1|CAG33719.1| 462|Homo sapiens RARA protein. 49 2e-05
BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,... 49 2e-05
BC008727-1|AAH08727.1| 462|Homo sapiens retinoic acid receptor,... 49 2e-05
AF088895-1|AAD05222.1| 462|Homo sapiens retinoic acid receptor ... 49 2e-05
AF012304-1|AAC33511.1| 194|Homo sapiens nuclear mitotic apparat... 49 2e-05
U38480-1|AAA80681.1| 463|Homo sapiens retinoid X receptor-gamma... 46 1e-04
CR456705-1|CAG32986.1| 463|Homo sapiens RXRG protein. 46 1e-04
BC041421-1|AAH41421.1| 322|Homo sapiens NR2E3 protein protein. 46 1e-04
BC012063-1|AAH12063.1| 463|Homo sapiens retinoid X receptor, ga... 46 1e-04
AL160058-2|CAC00596.1| 463|Homo sapiens retinoid X receptor, ga... 46 1e-04
AJ276674-1|CAB82769.1| 410|Homo sapiens photoreceptor-specific ... 46 1e-04
AF148128-1|AAF22227.1| 367|Homo sapiens nuclear receptor protein. 46 1e-04
AF121129-1|AAD28301.1| 410|Homo sapiens photoreceptor-specific ... 46 1e-04
M29960-1|AAA36761.1| 603|Homo sapiens protein ( Human steroid r... 46 1e-04
M29959-1|AAA36762.1| 467|Homo sapiens protein ( Human steroid r... 46 1e-04
M21985-1|AAA36650.1| 483|Homo sapiens protein ( Human steroid r... 46 1e-04
BC040141-1|AAH40141.1| 467|Homo sapiens nuclear receptor subfam... 46 1e-04
X52773-1|CAA36982.1| 462|Homo sapiens protein ( Human mRNA for ... 44 4e-04
DQ303444-1|ABB96254.1| 452|Homo sapiens retinoid X receptor, al... 44 4e-04
BC110998-1|AAI10999.1| 462|Homo sapiens retinoid X receptor, al... 44 4e-04
BC063827-1|AAH63827.1| 516|Homo sapiens RXRA protein protein. 44 4e-04
AL669970-1|CAM45733.1| 462|Homo sapiens retinoid X receptor, al... 44 4e-04
AL354796-1|CAH70571.1| 462|Homo sapiens retinoid X receptor, al... 44 4e-04
U80802-1|AAB96828.1| 480|Homo sapiens orphan nuclear receptor G... 44 6e-04
U64876-1|AAB06335.1| 480|Homo sapiens nuclear orphan receptor p... 44 6e-04
S83309-1|AAB50876.1| 476|Homo sapiens germ cell nuclear factor ... 44 6e-04
BC030600-1|AAH30600.1| 475|Homo sapiens nuclear receptor subfam... 44 6e-04
AL354979-4|CAI10960.1| 479|Homo sapiens nuclear receptor subfam... 44 6e-04
AL354928-2|CAI39633.1| 479|Homo sapiens nuclear receptor subfam... 44 6e-04
AL158075-1|CAI13577.1| 479|Homo sapiens nuclear receptor subfam... 44 6e-04
AF004291-1|AAC52054.1| 454|Homo sapiens germ cell nuclear facto... 44 6e-04
X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor ... 43 0.001
M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta ... 43 0.001
BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, be... 43 0.001
BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, be... 43 0.001
AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, be... 43 0.001
AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, be... 43 0.001
AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, b... 43 0.001
AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, b... 43 0.001
AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, be... 43 0.001
AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, be... 43 0.001
AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, b... 43 0.001
AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, b... 43 0.001
AL031228-12|CAI95621.1| 262|Homo sapiens retinoid X receptor, b... 43 0.001
AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor bet... 43 0.001
AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B p... 43 0.001
AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, be... 43 0.001
X99975-1|CAA68236.1| 480|Homo sapiens hRTR/hGCNF protein protein. 42 0.002
X75918-1|CAA53518.1| 598|Homo sapiens NOT protein. 42 0.002
U10990-1|AAC50118.1| 596|Homo sapiens hTAK1 protein. 42 0.002
S77154-1|AAB33999.1| 535|Homo sapiens TINUR protein. 42 0.002
L27586-1|AAA21474.1| 615|Homo sapiens TR4 orphan receptor protein. 42 0.002
BC066890-1|AAH66890.1| 535|Homo sapiens nuclear receptor subfam... 42 0.002
BC051670-1|AAH51670.1| 530|Homo sapiens NR2C2 protein protein. 42 0.002
BC009288-1|AAH09288.1| 598|Homo sapiens nuclear receptor subfam... 42 0.002
AK223625-1|BAD97345.1| 598|Homo sapiens nuclear receptor subfam... 42 0.002
AC074099-1|AAY24203.1| 598|Homo sapiens unknown protein. 42 0.002
AB019433-1|BAA77328.1| 598|Homo sapiens T-cell nuclear receptor... 42 0.002
AB017586-1|BAA75666.1| 598|Homo sapiens Nurr1 protein. 42 0.002
Y13276-1|CAA73725.1| 385|Homo sapiens Tailless protein protein. 42 0.002
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 42 0.002
U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear o... 42 0.002
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 42 0.002
D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein. 42 0.002
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 42 0.002
D49728-1|BAA08565.1| 598|Homo sapiens DNA binding protein protein. 42 0.002
BT007144-1|AAP35808.1| 598|Homo sapiens nuclear receptor subfam... 42 0.002
BC028031-1|AAH28031.1| 385|Homo sapiens nuclear receptor subfam... 42 0.002
BC016147-1|AAH16147.1| 598|Homo sapiens nuclear receptor subfam... 42 0.002
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 42 0.002
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 42 0.002
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 42 0.002
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 42 0.002
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 42 0.002
AL078596-2|CAO03480.1| 422|Homo sapiens nuclear receptor subfam... 42 0.002
AL078596-1|CAB75626.1| 385|Homo sapiens nuclear receptor subfam... 42 0.002
AK131566-1|BAD18699.1| 652|Homo sapiens protein ( Homo sapiens ... 42 0.002
AK131541-1|BAD18677.1| 422|Homo sapiens protein ( Homo sapiens ... 42 0.002
AF411525-1|AAL05871.1| 385|Homo sapiens nuclear receptor subfam... 42 0.002
AF220532-1|AAG31945.1| 385|Homo sapiens orphan nuclear receptor... 42 0.002
X55074-2|CAB57886.1| 490|Homo sapiens thyroid hormone receptor ... 41 0.003
X55074-1|CAA38899.1| 410|Homo sapiens thyroid hormone receptor ... 41 0.003
X55005-1|CAA38749.1| 410|Homo sapiens thyriod hormone receptor ... 41 0.003
M24899-1|AAA35783.1| 490|Homo sapiens triiodothyronine receptor... 41 0.003
M24748-2|AAA66021.1| 410|Homo sapiens thyroid receptor alpha-1 ... 41 0.003
L13740-1|AAA36763.1| 598|Homo sapiens TR3 orphan receptor protein. 41 0.003
J03239-1|AAA61176.1| 490|Homo sapiens thyroid hormone receptor ... 41 0.003
CR541915-1|CAG46713.1| 410|Homo sapiens THRA protein. 41 0.003
BC035137-1|AAH35137.1| 451|Homo sapiens THRA protein protein. 41 0.003
BC008851-1|AAH08851.1| 410|Homo sapiens THRA protein protein. 41 0.003
BC002728-1|AAH02728.1| 490|Homo sapiens thyroid hormone recepto... 41 0.003
BC000261-1|AAH00261.1| 490|Homo sapiens thyroid hormone recepto... 41 0.003
AB209346-1|BAD92583.1| 397|Homo sapiens thyroid hormone recepto... 41 0.003
CR456704-1|CAG32985.1| 598|Homo sapiens NR4A1 protein. 40 0.006
Y00479-1|CAA68539.1| 490|Homo sapiens protein ( H.sapiens mRNA ... 39 0.017
X04707-1|CAA28412.1| 456|Homo sapiens put.thyroid hormone recep... 38 0.022
M26747-1|AAA35677.1| 456|Homo sapiens c-erbA protein. 38 0.022
BC106930-1|AAI06931.1| 461|Homo sapiens THRB protein protein. 38 0.022
BC106929-1|AAI06930.1| 461|Homo sapiens thyroid hormone recepto... 38 0.022
Z49825-1|CAA89989.1| 504|Homo sapiens hepatocyte nuclear factor... 38 0.029
X87872-1|CAA61135.1| 408|Homo sapiens Hepatocyte nuclear factor... 38 0.029
X87871-1|CAA61134.1| 465|Homo sapiens Hepatocyte nuclear factor... 38 0.029
X87870-1|CAA61133.1| 455|Homo sapiens Hepatocyte nuclear factor... 38 0.029
X76930-1|CAA54248.1| 465|Homo sapiens hepatocyte nuclear factor... 38 0.029
U72969-1|AAB48082.1| 516|Homo sapiens hepatocyte nuclear factor... 38 0.029
U72967-1|AAB48083.1| 408|Homo sapiens hepatocyte nuclear factor... 38 0.029
EF591040-1|ABQ52204.1| 474|Homo sapiens hepatocyte nuclear fact... 38 0.029
DQ356894-1|ABC97372.1| 186|Homo sapiens peroxisome proliferativ... 38 0.029
AY680698-1|AAT91239.1| 395|Homo sapiens hepatocyte nuclear fact... 38 0.029
AY680697-1|AAT91238.1| 452|Homo sapiens hepatocyte nuclear fact... 38 0.029
AY680696-1|AAT91237.1| 442|Homo sapiens hepatocyte nuclear fact... 38 0.029
AL132772-3|CAI18857.1| 467|Homo sapiens hepatocyte nuclear fact... 38 0.029
AL132772-2|CAC01303.1| 474|Homo sapiens hepatocyte nuclear fact... 38 0.029
AL132772-1|CAI18856.1| 417|Homo sapiens hepatocyte nuclear fact... 38 0.029
U93553-1|AAD03155.1| 500|Homo sapiens alpha1-fetoprotein transc... 38 0.039
U80251-1|AAC78727.1| 495|Homo sapiens hepatocytic transcription... 38 0.039
D88155-1|BAA13546.1| 461|Homo sapiens AdBP4 protein. 38 0.039
BC118652-1|AAI18653.1| 495|Homo sapiens nuclear receptor subfam... 38 0.039
BC118571-1|AAI18572.1| 495|Homo sapiens nuclear receptor subfam... 38 0.039
AF190464-2|AAG17124.1| 495|Homo sapiens hepatocytic transcripti... 38 0.039
AF190464-1|AAG17125.1| 541|Homo sapiens hepatocytic transcripti... 38 0.039
AF146343-1|AAD37378.1| 495|Homo sapiens CYP7A promoter binding ... 38 0.039
AF124247-1|AAD26565.1| 541|Homo sapiens hepatocytic transcripti... 38 0.039
AF049102-1|AAD03248.1| 323|Homo sapiens alpha1-fetoprotein tran... 38 0.039
AB019246-1|BAA34092.1| 541|Homo sapiens FTZ-F1 related protein ... 38 0.039
Z49826-1|CAA89990.2| 408|Homo sapiens hepatocyte nuclear factor... 37 0.068
BC105011-1|AAI05012.1| 408|Homo sapiens HNF4G protein protein. 37 0.068
BC105009-1|AAI05010.1| 408|Homo sapiens HNF4G protein protein. 37 0.068
AF133504-1|AAF00110.1| 408|Homo sapiens hepatocyte nuclear fact... 37 0.068
CR542091-1|CAG46888.1| 408|Homo sapiens HNF4G protein. 36 0.16
U76388-1|AAB53105.1| 461|Homo sapiens steroidogenic factor 1 pr... 35 0.21
BC032501-1|AAH32501.1| 461|Homo sapiens nuclear receptor subfam... 35 0.21
AL354979-3|CAI10959.1| 461|Homo sapiens nuclear receptor subfam... 35 0.21
AL354979-2|CAI10958.1| 178|Homo sapiens nuclear receptor subfam... 35 0.21
AL137846-2|CAI10872.1| 461|Homo sapiens nuclear receptor subfam... 35 0.21
X67482-1|CAA47824.1| 427|Homo sapiens HL-60 1,25-dihydroxyvitam... 34 0.36
J03258-1|AAA61273.1| 427|Homo sapiens VDR protein. 34 0.36
BC060832-1|AAH60832.1| 427|Homo sapiens VDR protein protein. 34 0.36
AY342401-1|AAP88938.1| 424|Homo sapiens vitamin D (1,25-dihydro... 34 0.36
AF026260-1|AAB95155.1| 427|Homo sapiens vitamin D receptor prot... 34 0.36
AB002168-1|BAA83389.1| 427|Homo sapiens vitamin D receptor prot... 34 0.36
X51417-1|CAA35779.1| 433|Homo sapiens protein ( Human mRNA for ... 34 0.48
X51416-1|CAA35778.1| 521|Homo sapiens protein ( Human mRNA for ... 34 0.48
L38487-1|AAB17015.1| 481|Homo sapiens estrogen receptor-related... 34 0.48
DQ514553-1|ABF47104.1| 423|Homo sapiens estrogen-related recept... 34 0.48
BT019411-1|AAV38218.1| 447|Homo sapiens nuclear receptor subfam... 34 0.48
BC131517-1|AAI31518.1| 503|Homo sapiens ESRRB protein protein. 34 0.48
BC093722-1|AAH93722.1| 423|Homo sapiens estrogen-related recept... 34 0.48
BC093720-1|AAH93720.1| 423|Homo sapiens estrogen-related recept... 34 0.48
BC092470-1|AAH92470.1| 423|Homo sapiens ESRRA protein protein. 34 0.48
BC064700-1|AAH64700.1| 442|Homo sapiens ESRRG protein protein. 34 0.48
BC063795-1|AAH63795.2| 423|Homo sapiens estrogen-related recept... 34 0.48
BC033701-1|AAH33701.1| 299|Homo sapiens Similar to estrogen-rel... 34 0.48
BC008218-1|AAH08218.1| 343|Homo sapiens ESRRG protein protein. 34 0.48
BC007915-1|AAH07915.2| 320|Homo sapiens ESRRA protein protein. 34 0.48
AY528719-1|AAS00098.1| 435|Homo sapiens estrogen-related recept... 34 0.48
AY451390-1|AAS15572.1| 508|Homo sapiens estrogen receptor-relat... 34 0.48
AY451389-1|AAS15571.1| 433|Homo sapiens estrogen receptor-relat... 34 0.48
AY388461-1|AAQ93381.1| 435|Homo sapiens estrogen-related recept... 34 0.48
AY388460-1|AAQ93380.1| 435|Homo sapiens estrogen-related recept... 34 0.48
AY388459-1|AAQ93379.1| 435|Homo sapiens estrogen-related recept... 34 0.48
AY388458-1|AAQ93378.1| 435|Homo sapiens estrogen-related recept... 34 0.48
AY388457-1|AAQ93377.1| 435|Homo sapiens estrogen-related recept... 34 0.48
AY388456-1|AAQ93376.1| 458|Homo sapiens estrogen-related recept... 34 0.48
AL512650-2|CAH71595.1| 442|Homo sapiens estrogen-related recept... 34 0.48
AL512650-1|CAH71594.1| 435|Homo sapiens estrogen-related recept... 34 0.48
AL445650-2|CAH70619.1| 442|Homo sapiens estrogen-related recept... 34 0.48
AL445650-1|CAH70618.1| 435|Homo sapiens estrogen-related recept... 34 0.48
AF094518-1|AAC99410.1| 458|Homo sapiens nuclear receptor ERRG2 ... 34 0.48
AF094517-1|AAC99409.1| 500|Homo sapiens nuclear receptor ERRB2 ... 34 0.48
AF058291-1|AAC39899.1| 436|Homo sapiens estrogen-related recept... 34 0.48
AC016543-1|AAG29619.1| 262|Homo sapiens hERRB2 protein. 34 0.48
AB020639-1|BAA74855.2| 469|Homo sapiens KIAA0832 protein protein. 34 0.48
U32592-1|AAA75332.1| 56|Homo sapiens steroidogenic factor 1 pr... 32 1.5
EF614253-1|ABR09276.1| 473|Homo sapiens nuclear receptor subfam... 32 1.5
DQ923326-1|ABJ52966.1| 397|Homo sapiens orphan nuclear receptor... 32 1.5
DQ911122-1|ABJ52965.1| 434|Homo sapiens orphan nuclear receptor... 32 1.5
BC017304-1|AAH17304.2| 433|Homo sapiens NR1I2 protein protein. 32 1.5
AY542548-1|AAS48621.1| 81|Homo sapiens nuclear receptor AdBP4 ... 32 1.5
AY091855-1|AAM26736.1| 434|Homo sapiens steroid and xenobiotic ... 32 1.5
AF364606-3|AAK38721.1| 397|Homo sapiens orphan nuclear receptor... 32 1.5
AF364606-2|AAK38720.1| 434|Homo sapiens orphan nuclear receptor... 32 1.5
AF364606-1|AAK38722.1| 473|Homo sapiens orphan nuclear receptor... 32 1.5
AF084645-1|AAC64558.1| 434|Homo sapiens orphan nuclear receptor... 32 1.5
AF084644-1|AAC64557.1| 473|Homo sapiens orphan nuclear receptor... 32 1.5
AF061056-1|AAD05436.1| 434|Homo sapiens orphan nuclear receptor... 32 1.5
X03635-2|CAA27284.1| 595|Homo sapiens oestrogen receptor protein. 31 2.5
U47678-1|AAB00115.1| 701|Homo sapiens 80 kDa estrogen receptor ... 31 2.5
M12674-1|AAA52399.1| 595|Homo sapiens ESR protein. 31 2.5
BC128574-1|AAI28575.1| 595|Homo sapiens estrogen receptor 1 pro... 31 2.5
BC128573-1|AAI28574.1| 595|Homo sapiens estrogen receptor 1 pro... 31 2.5
AY425004-1|AAQ91815.1| 595|Homo sapiens estrogen receptor 1 pro... 31 2.5
AL590993-1|CAI14237.1| 595|Homo sapiens estrogen receptor 1 pro... 31 2.5
AL356311-2|CAI21012.1| 595|Homo sapiens estrogen receptor 1 pro... 31 2.5
AL078582-4|CAI42285.1| 595|Homo sapiens estrogen receptor 1 pro... 31 2.5
AL049821-1|CAI22123.1| 595|Homo sapiens estrogen receptor 1 pro... 31 2.5
AJ009937-3|CAB55494.1| 342|Homo sapiens nuclear hormone recepto... 31 2.5
AJ009937-2|CAB55493.1| 420|Homo sapiens nuclear hormone recepto... 31 2.5
AJ009937-1|CAB55492.1| 397|Homo sapiens nuclear hormone recepto... 31 2.5
AJ009936-3|CAB55491.1| 379|Homo sapiens nuclear hormone recepto... 31 2.5
AJ009936-2|CAB55490.1| 457|Homo sapiens nuclear hormone recepto... 31 2.5
AJ009936-1|CAB55489.1| 434|Homo sapiens nuclear hormone recepto... 31 2.5
AF123500-1|AAD52984.1| 444|Homo sapiens estrogen receptor alpha... 31 2.5
U14534-1|AAA58594.1| 455|Homo sapiens orphan receptor protein. 31 3.4
U07132-1|AAA61783.1| 461|Homo sapiens Ner-I protein. 31 3.4
CR456706-1|CAG32987.1| 461|Homo sapiens NR1H2 protein. 31 3.4
BC074500-1|AAH74500.1| 461|Homo sapiens nuclear receptor subfam... 31 3.4
BC047750-1|AAH47750.1| 461|Homo sapiens nuclear receptor subfam... 31 3.4
BC041172-1|AAH41172.1| 402|Homo sapiens NR1H3 protein protein. 31 3.4
BC033500-1|AAH33500.1| 461|Homo sapiens nuclear receptor subfam... 31 3.4
BC008819-1|AAH08819.1| 387|Homo sapiens NR1H3 protein protein. 31 3.4
BC007790-1|AAH07790.1| 461|Homo sapiens nuclear receptor subfam... 31 3.4
U22662-1|AAA85856.1| 447|Homo sapiens nuclear orphan receptor L... 31 4.5
BX649592-4|CAO03498.1| 1838|Homo sapiens plexin B2 protein. 31 4.5
AY358508-1|AAQ88872.1| 277|Homo sapiens DILV594 protein. 31 4.5
AB002313-1|BAA21571.1| 1841|Homo sapiens KIAA0315 protein. 31 4.5
>X72631-1|CAB53540.1| 614|Homo sapiens Rev-ErbAalpha protein
protein.
Length = 614
Score = 77.4 bits (182), Expect = 4e-14
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521
NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+LA MQ + + ++ ++ L+ +P
Sbjct: 183 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLETSP 241
Score = 53.2 bits (122), Expect = 7e-07
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ IQY+ C KN+ CSI+RINR
Sbjct: 153 KGFFRRSIQQNIQYKRCLKNENCSIVRINR 182
>M24898-1|AAA52335.1| 614|Homo sapiens triiodothyronine receptor
protein.
Length = 614
Score = 77.4 bits (182), Expect = 4e-14
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521
NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+LA MQ + + ++ ++ L+ +P
Sbjct: 183 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLETSP 241
Score = 53.2 bits (122), Expect = 7e-07
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ IQY+ C KN+ CSI+RINR
Sbjct: 153 KGFFRRSIQQNIQYKRCLKNENCSIVRINR 182
>BC056148-1|AAH56148.1| 614|Homo sapiens nuclear receptor subfamily
1, group D, member 1 protein.
Length = 614
Score = 77.4 bits (182), Expect = 4e-14
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521
NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+LA MQ + + ++ ++ L+ +P
Sbjct: 183 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLETSP 241
Score = 53.2 bits (122), Expect = 7e-07
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ IQY+ C KN+ CSI+RINR
Sbjct: 153 KGFFRRSIQQNIQYKRCLKNENCSIVRINR 182
>BC047875-1|AAH47875.1| 614|Homo sapiens nuclear receptor subfamily
1, group D, member 1 protein.
Length = 614
Score = 77.4 bits (182), Expect = 4e-14
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521
NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+LA MQ + + ++ ++ L+ +P
Sbjct: 183 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLETSP 241
Score = 53.2 bits (122), Expect = 7e-07
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ IQY+ C KN+ CSI+RINR
Sbjct: 153 KGFFRRSIQQNIQYKRCLKNENCSIVRINR 182
>L31785-1|AAA65937.1| 579|Homo sapiens orphan nuclear hormone
receptor BD73 protein.
Length = 579
Score = 73.3 bits (172), Expect = 6e-13
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L MQ + + + Q
Sbjct: 153 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ 201
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ IQY+ C KN+ CSI+R+NR
Sbjct: 123 KGFFRRSIQQNIQYKKCLKNENCSIMRMNR 152
>D16815-1|BAA20088.1| 579|Homo sapiens EAR-1r protein.
Length = 579
Score = 73.3 bits (172), Expect = 6e-13
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L MQ + + + Q
Sbjct: 154 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ 202
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ IQY+ C KN+ CSI+R+NR
Sbjct: 124 KGFFRRSIQQNIQYKKCLKNENCSIMRMNR 153
>CR457434-1|CAG33715.1| 579|Homo sapiens NR1D2 protein.
Length = 579
Score = 73.3 bits (172), Expect = 6e-13
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L MQ + + + Q
Sbjct: 154 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ 202
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ IQY+ C KN+ CSI+R+NR
Sbjct: 124 KGFFRRSIQQNIQYKKCLKNENCSIMRMNR 153
>BC070035-1|AAH70035.1| 408|Homo sapiens NR1D2 protein protein.
Length = 408
Score = 73.3 bits (172), Expect = 6e-13
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L MQ + + + Q
Sbjct: 154 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ 202
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ IQY+ C KN+ CSI+R+NR
Sbjct: 124 KGFFRRSIQQNIQYKKCLKNENCSIMRMNR 153
>BC045613-1|AAH45613.1| 579|Homo sapiens nuclear receptor subfamily
1, group D, member 2 protein.
Length = 579
Score = 73.3 bits (172), Expect = 6e-13
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L MQ + + + Q
Sbjct: 154 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ 202
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ IQY+ C KN+ CSI+R+NR
Sbjct: 124 KGFFRRSIQQNIQYKKCLKNENCSIMRMNR 153
>AB209091-1|BAD92328.1| 549|Homo sapiens Orphan nuclear receptor
NR1D2 variant protein.
Length = 549
Score = 73.3 bits (172), Expect = 6e-13
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ CR KKC++VGMSRDAVRFGR+PKREK R+L MQ + + + Q
Sbjct: 123 NRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQ 171
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQ IQY+ C KN+ CSI+R+NR
Sbjct: 93 KGFFRRSIQQNIQYKKCLKNENCSIMRMNR 122
>L07592-1|AAA36469.1| 441|Homo sapiens peroxisome proliferator
activated receptor protein.
Length = 441
Score = 64.1 bits (149), Expect = 4e-10
Identities = 24/51 (47%), Positives = 39/51 (76%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A + + S+ + Q A
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRR+I+ K++Y C ++ C I + NR
Sbjct: 95 KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122
>BC007578-1|AAH07578.1| 361|Homo sapiens PPARD protein protein.
Length = 361
Score = 64.1 bits (149), Expect = 4e-10
Identities = 24/51 (47%), Positives = 39/51 (76%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A + + S+ + Q A
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRR+I+ K++Y C ++ C I + NR
Sbjct: 95 KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122
>BC002715-1|AAH02715.1| 361|Homo sapiens PPARD protein protein.
Length = 361
Score = 64.1 bits (149), Expect = 4e-10
Identities = 24/51 (47%), Positives = 39/51 (76%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A + + S+ + Q A
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRR+I+ K++Y C ++ C I + NR
Sbjct: 95 KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122
>AY919140-1|AAX14041.1| 441|Homo sapiens peroxisome proliferator
activated receptor delta protein.
Length = 441
Score = 64.1 bits (149), Expect = 4e-10
Identities = 24/51 (47%), Positives = 39/51 (76%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A + + S+ + Q A
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRR+I+ K++Y C ++ C I + NR
Sbjct: 95 KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122
>AY442342-1|AAR05439.1| 441|Homo sapiens peroxisome proliferative
activated receptor, delta protein.
Length = 441
Score = 64.1 bits (149), Expect = 4e-10
Identities = 24/51 (47%), Positives = 39/51 (76%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A + + S+ + Q A
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRR+I+ K++Y C ++ C I + NR
Sbjct: 95 KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122
>AL022721-9|CAD92505.1| 361|Homo sapiens peroxisome proliferative
activated receptor, delta protein.
Length = 361
Score = 64.1 bits (149), Expect = 4e-10
Identities = 24/51 (47%), Positives = 39/51 (76%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A + + S+ + Q A
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRR+I+ K++Y C ++ C I + NR
Sbjct: 95 KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122
>AL022721-8|CAB38629.1| 441|Homo sapiens peroxisome proliferative
activated receptor, delta protein.
Length = 441
Score = 64.1 bits (149), Expect = 4e-10
Identities = 24/51 (47%), Positives = 39/51 (76%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A + + S+ + Q A
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRR+I+ K++Y C ++ C I + NR
Sbjct: 95 KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122
>AF246303-1|AAF62553.1| 441|Homo sapiens peroxisome proliferative
activated receptor delta protein.
Length = 441
Score = 64.1 bits (149), Expect = 4e-10
Identities = 24/51 (47%), Positives = 39/51 (76%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A + + S+ + Q A
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRR+I+ K++Y C ++ C I + NR
Sbjct: 95 KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122
>U16997-1|AAA64751.1| 560|Homo sapiens ROR gamma protein.
Length = 560
Score = 62.9 bits (146), Expect = 9e-10
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ R +Q
Sbjct: 81 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 129
>CR457436-1|CAG33717.1| 518|Homo sapiens RORC protein.
Length = 518
Score = 62.9 bits (146), Expect = 9e-10
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ R +Q
Sbjct: 81 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 129
>BC110571-1|AAI10572.1| 518|Homo sapiens RAR-related orphan
receptor C protein.
Length = 518
Score = 62.9 bits (146), Expect = 9e-10
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ R +Q
Sbjct: 81 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 129
>BC031554-1|AAH31554.1| 518|Homo sapiens RAR-related orphan
receptor C protein.
Length = 518
Score = 62.9 bits (146), Expect = 9e-10
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ R +Q
Sbjct: 81 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 129
>AL589765-18|CAI17180.1| 518|Homo sapiens RAR-related orphan
receptor C protein.
Length = 518
Score = 62.9 bits (146), Expect = 9e-10
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ R +Q
Sbjct: 81 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 129
>AL589765-17|CAI17179.1| 497|Homo sapiens RAR-related orphan
receptor C protein.
Length = 497
Score = 62.9 bits (146), Expect = 9e-10
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ R +Q
Sbjct: 60 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 108
>AK223137-1|BAD96857.1| 518|Homo sapiens RAR-related orphan
receptor C isoform a variant protein.
Length = 518
Score = 62.9 bits (146), Expect = 9e-10
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ R +Q
Sbjct: 81 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQ 129
>U04899-1|AAA62660.1| 548|Homo sapiens RORalpha3 protein.
Length = 548
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++ + A +Q+ R H+Q
Sbjct: 148 NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 199
>U04898-1|AAA62659.1| 556|Homo sapiens RORalpha2 protein.
Length = 556
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++ + A +Q+ R H+Q
Sbjct: 156 NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 207
>U04897-1|AAA62658.1| 523|Homo sapiens RORalpha1 protein.
Length = 523
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++ + A +Q+ R H+Q
Sbjct: 123 NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 174
>L14611-1|AAA02963.1| 468|Homo sapiens transcription factor
protein.
Length = 468
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++ + A +Q+ R H+Q
Sbjct: 68 NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 119
>BC100990-1|AAI00991.1| 468|Homo sapiens RAR-related orphan
receptor A protein.
Length = 468
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++ + A +Q+ R H+Q
Sbjct: 68 NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 119
>BC100989-1|AAI00990.1| 468|Homo sapiens RAR-related orphan
receptor A protein.
Length = 468
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++ + A +Q+ R H+Q
Sbjct: 68 NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 119
>BC100988-1|AAI00989.1| 468|Homo sapiens RAR-related orphan
receptor A protein.
Length = 468
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++ + A +Q+ R H+Q
Sbjct: 68 NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 119
>BC100987-1|AAI00988.1| 468|Homo sapiens RAR-related orphan
receptor A protein.
Length = 468
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++ + A +Q+ R H+Q
Sbjct: 68 NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 119
>BC008831-1|AAH08831.1| 523|Homo sapiens RAR-related orphan
receptor A protein.
Length = 523
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQ 491
NRCQ+CRL+KC+AVGMSRDAV+FGR+ K+++ + A +Q+ R H+Q
Sbjct: 123 NRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQ 174
>Y08639-1|CAA69929.1| 459|Homo sapiens nuclear orphan receptor
ROR-beta protein.
Length = 459
Score = 62.1 bits (144), Expect = 2e-09
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM---QQSSSSRAHEQAAAAE 506
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A + QQ + EQ+ AE
Sbjct: 60 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQEQSGEAE 116
>X90563-2|CAA62153.1| 475|Homo sapiens peroxisome proliferator
activated receptor gamma protein.
Length = 475
Score = 61.7 bits (143), Expect = 2e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA + E A
Sbjct: 158 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 207
>X90563-1|CAA62152.1| 477|Homo sapiens peroxisome proliferator
activated receptor gamma protein.
Length = 477
Score = 61.7 bits (143), Expect = 2e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA + E A
Sbjct: 160 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 209
>U79012-1|AAC51248.1| 505|Homo sapiens ligand activated
transcription factor PPARgamma2 protein.
Length = 505
Score = 61.7 bits (143), Expect = 2e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA + E A
Sbjct: 188 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 237
>U63415-1|AAB04028.1| 505|Homo sapiens peroxisome proliferator
activated receptor gamma 2 protein.
Length = 505
Score = 61.7 bits (143), Expect = 2e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA + E A
Sbjct: 188 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 237
>L40904-1|AAA80314.2| 477|Homo sapiens peroxisome proliferator
activated receptor gamma protein.
Length = 477
Score = 61.7 bits (143), Expect = 2e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA + E A
Sbjct: 160 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 209
>BT007281-1|AAP35945.1| 477|Homo sapiens peroxisome proliferative
activated receptor, gamma protein.
Length = 477
Score = 61.7 bits (143), Expect = 2e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA + E A
Sbjct: 160 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 209
>BC006811-1|AAH06811.1| 477|Homo sapiens peroxisome
proliferator-activated receptor gamma protein.
Length = 477
Score = 61.7 bits (143), Expect = 2e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA + E A
Sbjct: 160 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 209
>AY222643-1|AAO66458.1| 584|Homo sapiens CREB3L2-PPARgamma protein.
Length = 584
Score = 61.7 bits (143), Expect = 2e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA + E A
Sbjct: 267 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 316
>AY157024-1|AAN38992.2| 475|Homo sapiens peroxisome proliferative
activated receptor gamma protein.
Length = 475
Score = 61.7 bits (143), Expect = 2e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA + E A
Sbjct: 158 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 207
>AK223528-1|BAD97248.1| 478|Homo sapiens peroxisome proliferative
activated receptor gamma isoform 2 variant protein.
Length = 478
Score = 61.7 bits (143), Expect = 2e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA + E A
Sbjct: 161 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 210
>AJ698135-1|CAG29019.1| 248|Homo sapiens peroxisome proliferative
activated receptor gamma protein.
Length = 248
Score = 61.7 bits (143), Expect = 2e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA + E A
Sbjct: 158 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 207
>AJ563370-1|CAD91389.1| 264|Homo sapiens peroxisome proliferative
activated receptor gamma protein.
Length = 264
Score = 61.7 bits (143), Expect = 2e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA + E A
Sbjct: 158 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 207
>AJ563369-1|CAD91388.1| 280|Homo sapiens peroxisome proliferative
activated receptor gamma protein.
Length = 280
Score = 61.7 bits (143), Expect = 2e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA + E A
Sbjct: 174 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 223
>AB005526-1|BAA23354.1| 474|Homo sapiens peroxisome proliferator
activated-receptor gamma protein.
Length = 474
Score = 61.7 bits (143), Expect = 2e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N+CQYCR +KC+AVGMS +A+RFGR+P+ EK ++LA + E A
Sbjct: 160 NKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESA 209
>BC093774-1|AAH93774.1| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 60.9 bits (141), Expect = 4e-09
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ R EQ
Sbjct: 60 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQK-HQQRLQEQ 107
>BC093772-1|AAH93772.1| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 60.9 bits (141), Expect = 4e-09
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ R EQ
Sbjct: 60 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQK-HQQRLQEQ 107
>BC051830-1|AAH51830.1| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 60.9 bits (141), Expect = 4e-09
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ R EQ
Sbjct: 60 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQK-HQQRLQEQ 107
>AL355674-1|CAD13280.2| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 60.9 bits (141), Expect = 4e-09
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ R EQ
Sbjct: 60 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQK-HQQRLQEQ 107
>AL137018-1|CAD13276.2| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 60.9 bits (141), Expect = 4e-09
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQ 491
NRCQ+CRL+KC+A+GMSRDAV+FGR+ K+++ + A +Q+ R EQ
Sbjct: 60 NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQK-HQQRLQEQ 107
>AB099507-1|BAC78903.1| 161|Homo sapiens peroxisome proliferative
activated receptor-delta isoform protein.
Length = 161
Score = 59.7 bits (138), Expect = 8e-09
Identities = 21/38 (55%), Positives = 33/38 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM 458
N+CQYCR +KC+A+GMS +A+RFGR+P+ EK +++A +
Sbjct: 123 NKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGL 160
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRR+I+ K++Y C ++ C I + NR
Sbjct: 95 KGFFRRTIRMKLEYEKCERS--CKIQKKNR 122
>Y07619-1|CAA68898.1| 468|Homo sapiens peroxisome
proliferator-activated receptor alpha protein.
Length = 468
Score = 59.3 bits (137), Expect = 1e-08
Identities = 22/36 (61%), Positives = 31/36 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
N+CQYCR KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186
>S74349-1|AAB32649.1| 468|Homo sapiens peroxisome proliferator
activated receptor alpha protein.
Length = 468
Score = 59.3 bits (137), Expect = 1e-08
Identities = 22/36 (61%), Positives = 31/36 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
N+CQYCR KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186
>L02932-1|AAA36468.1| 468|Homo sapiens peroxisome proliferator
activated receptor protein.
Length = 468
Score = 59.3 bits (137), Expect = 1e-08
Identities = 22/36 (61%), Positives = 31/36 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
N+CQYCR KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186
>D83233-1|BAA18949.1| 506|Homo sapiens PPAR gamma2 protein.
Length = 506
Score = 59.3 bits (137), Expect = 1e-08
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N+CQYCR +KC+AVGMS +A+RFGR+ + EK ++LA + E A
Sbjct: 188 NKCQYCRFQKCLAVGMSHNAIRFGRIAQAEKEKLLAEISSDIDQLNPESA 237
>CR457435-1|CAG33716.1| 468|Homo sapiens PPARA protein.
Length = 468
Score = 59.3 bits (137), Expect = 1e-08
Identities = 22/36 (61%), Positives = 31/36 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
N+CQYCR KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186
>CR456547-1|CAG30433.1| 468|Homo sapiens PPARA protein.
Length = 468
Score = 59.3 bits (137), Expect = 1e-08
Identities = 22/36 (61%), Positives = 31/36 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
N+CQYCR KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186
>BC000052-1|AAH00052.1| 258|Homo sapiens peroxisome
proliferator-activated receptor alpha protein.
Length = 258
Score = 59.3 bits (137), Expect = 1e-08
Identities = 22/36 (61%), Positives = 31/36 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
N+CQYCR KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186
>AY206718-1|AAO13489.1| 468|Homo sapiens peroxisome proliferative
activated receptor, alpha protein.
Length = 468
Score = 59.3 bits (137), Expect = 1e-08
Identities = 22/36 (61%), Positives = 31/36 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
N+CQYCR KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186
>AL078611-2|CAI18764.1| 468|Homo sapiens peroxisome proliferative
activated receptor, alpha protein.
Length = 468
Score = 59.3 bits (137), Expect = 1e-08
Identities = 22/36 (61%), Positives = 31/36 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
N+CQYCR KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186
>AL049856-1|CAI22450.1| 468|Homo sapiens peroxisome proliferative
activated receptor, alpha protein.
Length = 468
Score = 59.3 bits (137), Expect = 1e-08
Identities = 22/36 (61%), Positives = 31/36 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILA 452
N+CQYCR KC++VGMS +A+RFGR+P+ EKA++ A
Sbjct: 151 NKCQYCRFHKCLSVGMSHNAIRFGRMPRSEKAKLKA 186
>Y00291-1|CAA68398.1| 448|Homo sapiens protein ( Human hap mRNA
encoding a DNA-binding hormone receptor. ).
Length = 448
Score = 52.4 bits (120), Expect = 1e-06
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + V + +T NRCQYCRL+KC VGMS+++VR R K+++ + + ++E
Sbjct: 119 RDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKET------SKQECTESYE 172
Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
AELDD L ++ +AH +T
Sbjct: 173 M--TAELDD---LTEKIRKAHQET 191
Score = 30.3 bits (65), Expect = 5.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 102 KGFFRRSIQKNMIY-TCHRDKNCVINKVTR 130
>X07282-1|CAA30262.1| 448|Homo sapiens protein ( Human mRNA for
retinoic acid receptor-epsilon protein. ).
Length = 448
Score = 52.4 bits (120), Expect = 1e-06
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + V + +T NRCQYCRL+KC VGMS+++VR R K+++ + + ++E
Sbjct: 119 RDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKET------SKQECTESYE 172
Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
AELDD L ++ +AH +T
Sbjct: 173 M--TAELDD---LTEKIRKAHQET 191
Score = 30.3 bits (65), Expect = 5.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 102 KGFFRRSIQKNMIY-TCHRDKNCVINKVTR 130
>DQ083391-1|AAZ32403.1| 184|Homo sapiens retinoic acid receptor
beta 1' protein.
Length = 184
Score = 52.4 bits (120), Expect = 1e-06
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + V + +T NRCQYCRL+KC VGMS+++VR R K+++ + + ++E
Sbjct: 76 RDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKET------SKQECTESYE 129
Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
AELDD L ++ +AH +T
Sbjct: 130 M--TAELDD---LTEKIRKAHQET 148
Score = 30.3 bits (65), Expect = 5.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 59 KGFFRRSIQKNMIY-TCHRDKNCVINKVTR 87
>CR536558-1|CAG38795.1| 336|Homo sapiens RARB protein.
Length = 336
Score = 52.4 bits (120), Expect = 1e-06
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + V + +T NRCQYCRL+KC VGMS+++VR R K+++ + + ++E
Sbjct: 7 RDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKET------SKQECTESYE 60
Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
AELDD L ++ +AH +T
Sbjct: 61 M--TAELDD---LTEKIRKAHQET 79
>BC060794-1|AAH60794.1| 448|Homo sapiens retinoic acid receptor,
beta protein.
Length = 448
Score = 52.4 bits (120), Expect = 1e-06
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + V + +T NRCQYCRL+KC VGMS+++VR R K+++ + + ++E
Sbjct: 119 RDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKET------SKQECTESYE 172
Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
AELDD L ++ +AH +T
Sbjct: 173 M--TAELDD---LTEKIRKAHQET 191
Score = 30.3 bits (65), Expect = 5.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 102 KGFFRRSIQKNMIY-TCHRDKNCVINKVTR 130
>BC050415-1|AAH50415.2| 346|Homo sapiens RARB protein protein.
Length = 346
Score = 52.4 bits (120), Expect = 1e-06
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + V + +T NRCQYCRL+KC VGMS+++VR R K+++ + + ++E
Sbjct: 17 RDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKET------SKQECTESYE 70
Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
AELDD L ++ +AH +T
Sbjct: 71 M--TAELDD---LTEKIRKAHQET 89
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 257 GFFRRSIQQKIQYRPCTKNQQCSILRINR 343
GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 1 GFFRRSIQKNMIY-TCHRDKNCVINKVTR 28
>AY501390-1|AAS85757.1| 336|Homo sapiens retinoic acid receptor
beta 5 protein.
Length = 336
Score = 52.4 bits (120), Expect = 1e-06
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + V + +T NRCQYCRL+KC VGMS+++VR R K+++ + + ++E
Sbjct: 7 RDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKET------SKQECTESYE 60
Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
AELDD L ++ +AH +T
Sbjct: 61 M--TAELDD---LTEKIRKAHQET 79
>AF157483-1|AAD45688.1| 336|Homo sapiens retinoic acid receptor
beta 4 protein.
Length = 336
Score = 52.4 bits (120), Expect = 1e-06
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + V + +T NRCQYCRL+KC VGMS+++VR R K+++ + + ++E
Sbjct: 7 RDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKET------SKQECTESYE 60
Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
AELDD L ++ +AH +T
Sbjct: 61 M--TAELDD---LTEKIRKAHQET 79
>X12794-1|CAA31282.1| 403|Homo sapiens protein ( Human v-erbA
related ear-2 gene. ).
Length = 403
Score = 51.2 bits (117), Expect = 3e-06
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAEL---DD 515
N+CQYCRLKKC VGM ++AV+ GR+P + A+ S A+ +L
Sbjct: 106 NQCQYCRLKKCFRVGMRKEAVQRGRIPHSLPGAVAASSGSPPGSALAAVASGGDLFPGQP 165
Query: 516 APRLLARVVRA 548
L+A+++RA
Sbjct: 166 VSELIAQLLRA 176
>M57707-1|AAA63254.1| 454|Homo sapiens retinoic acid receptor-gamma
protein.
Length = 454
Score = 51.2 bits (117), Expect = 3e-06
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + + + +T NRCQYCRL+KC VGMS++AVR R K+++ +++ S ++E
Sbjct: 128 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKE------VKEEGSPDSYE 181
Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
+ E L+ +V +AH +T
Sbjct: 182 LSPQLE-----ELITKVSKAHQET 200
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 106 SCEGCKGFFRRSIQKNMVY-TCHRDKNCIINKVTR 139
>M38258-1|AAA60254.1| 454|Homo sapiens retinoic acid
receptor-gamma-1 protein.
Length = 454
Score = 51.2 bits (117), Expect = 3e-06
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + + + +T NRCQYCRL+KC VGMS++AVR R K+++ +++ S ++E
Sbjct: 128 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKE------VKEEGSPDSYE 181
Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
+ E L+ +V +AH +T
Sbjct: 182 LSPQLE-----ELITKVSKAHQET 200
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 106 SCEGCKGFFRRSIQKNMVY-TCHRDKNCIINKVTR 139
>M24857-1|AAA52692.1| 454|Homo sapiens RARG protein.
Length = 454
Score = 51.2 bits (117), Expect = 3e-06
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + + + +T NRCQYCRL+KC VGMS++AVR R K+++ +++ S ++E
Sbjct: 128 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKE------VKEEGSPDSYE 181
Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
+ E L+ +V +AH +T
Sbjct: 182 LSPQLE-----ELITKVSKAHQET 200
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 106 SCEGCKGFFRRSIQKNMVY-TCHRDKNCIINKVTR 139
>BC093729-1|AAH93729.1| 454|Homo sapiens retinoic acid receptor,
gamma protein.
Length = 454
Score = 51.2 bits (117), Expect = 3e-06
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + + + +T NRCQYCRL+KC VGMS++AVR R K+++ +++ S ++E
Sbjct: 128 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKE------VKEEGSPDSYE 181
Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
+ E L+ +V +AH +T
Sbjct: 182 LSPQLE-----ELITKVSKAHQET 200
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 106 SCEGCKGFFRRSIQKNMVY-TCHRDKNCIINKVTR 139
>BC093727-1|AAH93727.1| 454|Homo sapiens retinoic acid receptor,
gamma protein.
Length = 454
Score = 51.2 bits (117), Expect = 3e-06
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + + + +T NRCQYCRL+KC VGMS++AVR R K+++ +++ S ++E
Sbjct: 128 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKE------VKEEGSPDSYE 181
Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
+ E L+ +V +AH +T
Sbjct: 182 LSPQLE-----ELITKVSKAHQET 200
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 106 SCEGCKGFFRRSIQKNMVY-TCHRDKNCIINKVTR 139
>BC084544-1|AAH84544.2| 404|Homo sapiens nuclear receptor subfamily
2, group F, member 6 protein.
Length = 404
Score = 51.2 bits (117), Expect = 3e-06
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAEL---DD 515
N+CQYCRLKKC VGM ++AV+ GR+P + A+ S A+ +L
Sbjct: 106 NQCQYCRLKKCFRVGMRKEAVQRGRIPHSLPGAVAASSGSPPGSALAAVASGGDLFPGQP 165
Query: 516 APRLLARVVRA 548
L+A+++RA
Sbjct: 166 VSELIAQLLRA 176
>BC063018-1|AAH63018.2| 404|Homo sapiens nuclear receptor subfamily
2, group F, member 6 protein.
Length = 404
Score = 51.2 bits (117), Expect = 3e-06
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAEL---DD 515
N+CQYCRLKKC VGM ++AV+ GR+P + A+ S A+ +L
Sbjct: 106 NQCQYCRLKKCFRVGMRKEAVQRGRIPHSLPGAVAASSGSPPGSALAAVASGGDLFPGQP 165
Query: 516 APRLLARVVRA 548
L+A+++RA
Sbjct: 166 VSELIAQLLRA 176
>BC002669-1|AAH02669.3| 404|Homo sapiens nuclear receptor subfamily
2, group F, member 6 protein.
Length = 404
Score = 51.2 bits (117), Expect = 3e-06
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAEL---DD 515
N+CQYCRLKKC VGM ++AV+ GR+P + A+ S A+ +L
Sbjct: 106 NQCQYCRLKKCFRVGMRKEAVQRGRIPHSLPGAVAASSGSPPGSALAAVASGGDLFPGQP 165
Query: 516 APRLLARVVRA 548
L+A+++RA
Sbjct: 166 VSELIAQLLRA 176
>AJ250835-1|CAB60726.1| 381|Homo sapiens retinoic acid receptor
protein.
Length = 381
Score = 51.2 bits (117), Expect = 3e-06
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + + + +T NRCQYCRL+KC VGMS++AVR R K+++ +++ S ++E
Sbjct: 55 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKE------VKEEGSPDSYE 108
Query: 489 QAAAAELDDAPRLLARVVRAHLDT 560
+ E L+ +V +AH +T
Sbjct: 109 LSPQLE-----ELITKVSKAHQET 127
>AY013703-1|AAG41594.2| 58|Homo sapiens retinoic acid receptor
gamma protein.
Length = 58
Score = 50.4 bits (115), Expect = 5e-06
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443
+T NRCQYCRL+KC VGMS++AVR R K+++ R
Sbjct: 4 VTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKEVR 39
>U60477-1|AAB09475.1| 414|Homo sapiens apoliprotein AI regulatory
protein-1 protein.
Length = 414
Score = 49.6 bits (113), Expect = 9e-06
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH 485
N+CQYCRLKKC+ VGM R+AV+ GR+P + A+ H
Sbjct: 129 NQCQYCRLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCH 175
>M64497-1|AAA86429.1| 414|Homo sapiens apolipoprotein AI regulatory
protein-1 protein.
Length = 414
Score = 49.6 bits (113), Expect = 9e-06
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH 485
N+CQYCRLKKC+ VGM R+AV+ GR+P + A+ H
Sbjct: 129 NQCQYCRLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCH 175
>M62760-1|AAA21479.1| 351|Homo sapiens ovalbumin upstream promoter
transcription factor II protein.
Length = 351
Score = 49.6 bits (113), Expect = 9e-06
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH 485
N+CQYCRLKKC+ VGM R+AV+ GR+P + A+ H
Sbjct: 129 NQCQYCRLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCH 175
>BC042897-1|AAH42897.1| 414|Homo sapiens nuclear receptor subfamily
2, group F, member 2 protein.
Length = 414
Score = 49.6 bits (113), Expect = 9e-06
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH 485
N+CQYCRLKKC+ VGM R+AV+ GR+P + A+ H
Sbjct: 129 NQCQYCRLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCH 175
>BC014664-1|AAH14664.1| 414|Homo sapiens nuclear receptor subfamily
2, group F, member 2 protein.
Length = 414
Score = 49.6 bits (113), Expect = 9e-06
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH 485
N+CQYCRLKKC+ VGM R+AV+ GR+P + A+ H
Sbjct: 129 NQCQYCRLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCH 175
>X16155-1|CAA34277.1| 418|Homo sapiens COUP-TF protein.
Length = 418
Score = 49.2 bits (112), Expect = 1e-05
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
N+CQYCRLKKC+ VGM R+AV+ GR+P
Sbjct: 131 NQCQYCRLKKCLKVGMRREAVQRGRMP 157
>X12795-1|CAA31283.1| 423|Homo sapiens protein ( Human v-erbA
related ear-3 gene. ).
Length = 423
Score = 49.2 bits (112), Expect = 1e-05
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
N+CQYCRLKKC+ VGM R+AV+ GR+P
Sbjct: 136 NQCQYCRLKKCLKVGMRREAVQRGRMP 162
>BC017493-1|AAH17493.1| 423|Homo sapiens nuclear receptor subfamily
2, group F, member 1 protein.
Length = 423
Score = 49.2 bits (112), Expect = 1e-05
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
N+CQYCRLKKC+ VGM R+AV+ GR+P
Sbjct: 136 NQCQYCRLKKCLKVGMRREAVQRGRMP 162
>BC004154-1|AAH04154.1| 423|Homo sapiens nuclear receptor subfamily
2, group F, member 1 protein.
Length = 423
Score = 49.2 bits (112), Expect = 1e-05
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
N+CQYCRLKKC+ VGM R+AV+ GR+P
Sbjct: 136 NQCQYCRLKKCLKVGMRREAVQRGRMP 162
>X06614-1|CAA29829.1| 462|Homo sapiens protein ( Human mRNA for
receptor of retinoic acid. ).
Length = 462
Score = 48.8 bits (111), Expect = 2e-05
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
R + + + +T NRCQYCRL+KC VGMS+++VR R K+++
Sbjct: 126 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 168
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 109 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 137
>X06538-1|CAA29787.1| 432|Homo sapiens protein ( Human mRNA for
retinoic acid receptor. ).
Length = 432
Score = 48.8 bits (111), Expect = 2e-05
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
R + + + +T NRCQYCRL+KC VGMS+++VR R K+++
Sbjct: 96 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 138
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 79 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 107
>U41743-1|AAB00113.1| 520|Homo sapiens nucleophosmin-retinoic acid
receptor alpha fusion protein NPM-RAR short form
protein.
Length = 520
Score = 48.8 bits (111), Expect = 2e-05
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
R + + + +T NRCQYCRL+KC VGMS+++VR R K+++
Sbjct: 184 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 226
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 167 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 195
>U41742-1|AAB00112.1| 563|Homo sapiens nucleophosmin-retinoic acid
receptor alpha fusion protein NPM-RAR long form protein.
Length = 563
Score = 48.8 bits (111), Expect = 2e-05
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
R + + + +T NRCQYCRL+KC VGMS+++VR R K+++
Sbjct: 227 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 269
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 210 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 238
>S50916-1|AAB19602.2| 416|Homo sapiens retinoic acid receptor alpha
protein.
Length = 416
Score = 48.8 bits (111), Expect = 2e-05
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
R + + + +T NRCQYCRL+KC VGMS+++VR R K+++
Sbjct: 80 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 122
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 63 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 91
>M73779-1|AAA60126.1| 797|Homo sapiens PML-RAR protein protein.
Length = 797
Score = 48.8 bits (111), Expect = 2e-05
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
R + + + +T NRCQYCRL+KC VGMS+++VR R K+++
Sbjct: 461 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 503
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 444 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 472
>CR457438-1|CAG33719.1| 462|Homo sapiens RARA protein.
Length = 462
Score = 48.8 bits (111), Expect = 2e-05
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
R + + + +T NRCQYCRL+KC VGMS+++VR R K+++
Sbjct: 126 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 168
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 109 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 137
>BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,
alpha protein.
Length = 457
Score = 48.8 bits (111), Expect = 2e-05
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
R + + + +T NRCQYCRL+KC VGMS+++VR R K+++
Sbjct: 121 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 163
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 104 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 132
>BC008727-1|AAH08727.1| 462|Homo sapiens retinoic acid receptor,
alpha protein.
Length = 462
Score = 48.8 bits (111), Expect = 2e-05
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
R + + + +T NRCQYCRL+KC VGMS+++VR R K+++
Sbjct: 126 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 168
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 109 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 137
>AF088895-1|AAD05222.1| 462|Homo sapiens retinoic acid receptor
alpha protein.
Length = 462
Score = 48.8 bits (111), Expect = 2e-05
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
R + + + +T NRCQYCRL+KC VGMS+++VR R K+++
Sbjct: 126 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 168
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 109 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 137
>AF012304-1|AAC33511.1| 194|Homo sapiens nuclear mitotic apparatus
protein-retinoic acid receptor alpha fusion protein
protein.
Length = 194
Score = 48.8 bits (111), Expect = 2e-05
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
R + + + +T NRCQYCRL+KC VGMS+++VR R K+++
Sbjct: 130 RDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKE 172
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQ+ + Y C +++ C I ++ R
Sbjct: 113 KGFFRRSIQKNMVY-TCHRDKNCIINKVTR 141
>U38480-1|AAA80681.1| 463|Homo sapiens retinoid X receptor-gamma
protein.
Length = 463
Score = 46.0 bits (104), Expect = 1e-04
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSS-SSRAHEQAAAAELDDAP 521
NRCQYCR +KC+ +GM R+AV+ R RE+A A S E+ AEL P
Sbjct: 189 NRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECATSGHEDMPVERILEAELAVEP 248
Query: 522 R 524
+
Sbjct: 249 K 249
>CR456705-1|CAG32986.1| 463|Homo sapiens RXRG protein.
Length = 463
Score = 46.0 bits (104), Expect = 1e-04
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSS-SSRAHEQAAAAELDDAP 521
NRCQYCR +KC+ +GM R+AV+ R RE+A A S E+ AEL P
Sbjct: 189 NRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECATSGHEDMPVERILEAELAVEP 248
Query: 522 R 524
+
Sbjct: 249 K 249
>BC041421-1|AAH41421.1| 322|Homo sapiens NR2E3 protein protein.
Length = 322
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
N+CQ CRLKKC+ GM++DAV+ R P+ L +M+ ++ SR A
Sbjct: 10 NQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVHLDSMESNTESRPESLVA 60
>BC012063-1|AAH12063.1| 463|Homo sapiens retinoid X receptor, gamma
protein.
Length = 463
Score = 46.0 bits (104), Expect = 1e-04
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSS-SSRAHEQAAAAELDDAP 521
NRCQYCR +KC+ +GM R+AV+ R RE+A A S E+ AEL P
Sbjct: 189 NRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECATSGHEDMPVERILEAELAVEP 248
Query: 522 R 524
+
Sbjct: 249 K 249
>AL160058-2|CAC00596.1| 463|Homo sapiens retinoid X receptor, gamma
protein.
Length = 463
Score = 46.0 bits (104), Expect = 1e-04
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSS-SSRAHEQAAAAELDDAP 521
NRCQYCR +KC+ +GM R+AV+ R RE+A A S E+ AEL P
Sbjct: 189 NRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECATSGHEDMPVERILEAELAVEP 248
Query: 522 R 524
+
Sbjct: 249 K 249
>AJ276674-1|CAB82769.1| 410|Homo sapiens photoreceptor-specific
nuclear receptor protein.
Length = 410
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
N+CQ CRLKKC+ GM++DAV+ R P+ L +M+ ++ SR A
Sbjct: 98 NQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVHLDSMESNTESRPESLVA 148
>AF148128-1|AAF22227.1| 367|Homo sapiens nuclear receptor protein.
Length = 367
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
N+CQ CRLKKC+ GM++DAV+ R P+ L +M+ ++ SR A
Sbjct: 98 NQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVHLDSMESNTESRPESLVA 148
>AF121129-1|AAD28301.1| 410|Homo sapiens photoreceptor-specific
nuclear receptor protein.
Length = 410
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAA 497
N+CQ CRLKKC+ GM++DAV+ R P+ L +M+ ++ SR A
Sbjct: 98 NQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVHLDSMESNTESRPESLVA 148
>M29960-1|AAA36761.1| 603|Homo sapiens protein ( Human steroid
receptor (TR2-11) mRNA, complete cds. ).
Length = 603
Score = 45.6 bits (103), Expect = 1e-04
Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
NRCQYCRL++CIA GM +D+V+ R P REK+ AA
Sbjct: 163 NRCQYCRLQRCIAFGMKQDSVQCERKPIEVSREKSSNCAA 202
>M29959-1|AAA36762.1| 467|Homo sapiens protein ( Human steroid
receptor (TR2-9) mRNA, complete cds. ).
Length = 467
Score = 45.6 bits (103), Expect = 1e-04
Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
NRCQYCRL++CIA GM +D+V+ R P REK+ AA
Sbjct: 163 NRCQYCRLQRCIAFGMKQDSVQCERKPIEVSREKSSNCAA 202
>M21985-1|AAA36650.1| 483|Homo sapiens protein ( Human steroid
receptor TR2 mRNA, complete cds. ).
Length = 483
Score = 45.6 bits (103), Expect = 1e-04
Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
NRCQYCRL++CIA GM +D+V+ R P REK+ AA
Sbjct: 163 NRCQYCRLQRCIAFGMKQDSVQCERKPIEVSREKSSNCAA 202
>BC040141-1|AAH40141.1| 467|Homo sapiens nuclear receptor subfamily
2, group C, member 1 protein.
Length = 467
Score = 45.6 bits (103), Expect = 1e-04
Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
NRCQYCRL++CIA GM +D+V+ R P REK+ AA
Sbjct: 163 NRCQYCRLQRCIAFGMKQDSVQCERKPIEVSREKSSNCAA 202
>X52773-1|CAA36982.1| 462|Homo sapiens protein ( Human mRNA for
retinoic acid receptor-like protein. ).
Length = 462
Score = 44.0 bits (99), Expect = 4e-04
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH---EQAAAAELDD 515
NRCQYCR +KC+A+GM R+AV+ R +R K R ++ +SS+ E+ AEL
Sbjct: 185 NRCQYCRYQKCLAMGMKREAVQEER--QRGKDRNENEVESTSSANEDMPVERILEAELAV 242
Query: 516 APR 524
P+
Sbjct: 243 EPK 245
>DQ303444-1|ABB96254.1| 452|Homo sapiens retinoid X receptor, alpha
protein.
Length = 452
Score = 44.0 bits (99), Expect = 4e-04
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH---EQAAAAELDD 515
NRCQYCR +KC+A+GM R+AV+ R +R K R ++ +SS+ E+ AEL
Sbjct: 175 NRCQYCRYQKCLAMGMKREAVQEER--QRGKDRNENEVESTSSANEDMPVERILEAELAV 232
Query: 516 APR 524
P+
Sbjct: 233 EPK 235
>BC110998-1|AAI10999.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 44.0 bits (99), Expect = 4e-04
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH---EQAAAAELDD 515
NRCQYCR +KC+A+GM R+AV+ R +R K R ++ +SS+ E+ AEL
Sbjct: 185 NRCQYCRYQKCLAMGMKREAVQEER--QRGKDRNENEVESTSSANEDMPVERILEAELAV 242
Query: 516 APR 524
P+
Sbjct: 243 EPK 245
>BC063827-1|AAH63827.1| 516|Homo sapiens RXRA protein protein.
Length = 516
Score = 44.0 bits (99), Expect = 4e-04
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH---EQAAAAELDD 515
NRCQYCR +KC+A+GM R+AV+ R +R K R ++ +SS+ E+ AEL
Sbjct: 239 NRCQYCRYQKCLAMGMKREAVQEER--QRGKDRNENEVESTSSANEDMPVERILEAELAV 296
Query: 516 APR 524
P+
Sbjct: 297 EPK 299
>AL669970-1|CAM45733.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 44.0 bits (99), Expect = 4e-04
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH---EQAAAAELDD 515
NRCQYCR +KC+A+GM R+AV+ R +R K R ++ +SS+ E+ AEL
Sbjct: 185 NRCQYCRYQKCLAMGMKREAVQEER--QRGKDRNENEVESTSSANEDMPVERILEAELAV 242
Query: 516 APR 524
P+
Sbjct: 243 EPK 245
>AL354796-1|CAH70571.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 44.0 bits (99), Expect = 4e-04
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH---EQAAAAELDD 515
NRCQYCR +KC+A+GM R+AV+ R +R K R ++ +SS+ E+ AEL
Sbjct: 185 NRCQYCRYQKCLAMGMKREAVQEER--QRGKDRNENEVESTSSANEDMPVERILEAELAV 242
Query: 516 APR 524
P+
Sbjct: 243 EPK 245
>U80802-1|AAB96828.1| 480|Homo sapiens orphan nuclear receptor GCNF
protein.
Length = 480
Score = 43.6 bits (98), Expect = 6e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
R + V S NRCQYCRL KC+ +GM+R A+R +P
Sbjct: 98 RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 136
>U64876-1|AAB06335.1| 480|Homo sapiens nuclear orphan receptor
protein.
Length = 480
Score = 43.6 bits (98), Expect = 6e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
R + V S NRCQYCRL KC+ +GM+R A+R +P
Sbjct: 98 RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 136
>S83309-1|AAB50876.1| 476|Homo sapiens germ cell nuclear factor
protein.
Length = 476
Score = 43.6 bits (98), Expect = 6e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
R + V S NRCQYCRL KC+ +GM+R A+R +P
Sbjct: 94 RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 132
>BC030600-1|AAH30600.1| 475|Homo sapiens nuclear receptor subfamily
6, group A, member 1 protein.
Length = 475
Score = 43.6 bits (98), Expect = 6e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
R + V S NRCQYCRL KC+ +GM+R A+R +P
Sbjct: 94 RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 132
>AL354979-4|CAI10960.1| 479|Homo sapiens nuclear receptor subfamily
6, group A, member 1 protein.
Length = 479
Score = 43.6 bits (98), Expect = 6e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
R + V S NRCQYCRL KC+ +GM+R A+R +P
Sbjct: 98 RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 136
>AL354928-2|CAI39633.1| 479|Homo sapiens nuclear receptor subfamily
6, group A, member 1 protein.
Length = 479
Score = 43.6 bits (98), Expect = 6e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
R + V S NRCQYCRL KC+ +GM+R A+R +P
Sbjct: 98 RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 136
>AL158075-1|CAI13577.1| 479|Homo sapiens nuclear receptor subfamily
6, group A, member 1 protein.
Length = 479
Score = 43.6 bits (98), Expect = 6e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
R + V S NRCQYCRL KC+ +GM+R A+R +P
Sbjct: 98 RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 136
>AF004291-1|AAC52054.1| 454|Homo sapiens germ cell nuclear factor
protein.
Length = 454
Score = 43.6 bits (98), Expect = 6e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
R + V S NRCQYCRL KC+ +GM+R A+R +P
Sbjct: 72 RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMP 110
>X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor b
protein.
Length = 533
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285
>M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta
protein.
Length = 533
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285
>BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285
>BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285
>AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285
>AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285
>AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285
>AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285
>AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285
>AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285
>AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, beta
protein.
Length = 482
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 204 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 234
>AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285
>AL031228-12|CAI95621.1| 262|Homo sapiens retinoid X receptor, beta
protein.
Length = 262
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 226 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 256
>AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor beta
protein.
Length = 533
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285
>AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B
protein.
Length = 533
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 255 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 285
>AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, beta
variant protein.
Length = 577
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
NRCQYCR +KC+A GM R+AV+ R ++K
Sbjct: 295 NRCQYCRYQKCLATGMKREAVQEERQRGKDK 325
>X99975-1|CAA68236.1| 480|Homo sapiens hRTR/hGCNF protein protein.
Length = 480
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVP 425
R + V S NRCQYCRL KC+ +GM+R +R +P
Sbjct: 98 RDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKTIREDGMP 136
>X75918-1|CAA53518.1| 598|Homo sapiens NOT protein.
Length = 598
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
NRCQYCR +KC+AVGM ++ VR GR+P + K+
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 351
>U10990-1|AAC50118.1| 596|Homo sapiens hTAK1 protein.
Length = 596
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
NRCQ+CRLKKC+ +GM ++V+ R P +REK AA
Sbjct: 167 NRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPSNCAA 206
Score = 30.3 bits (65), Expect = 5.9
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFF+RS+++ + Y C NQ C I + +R
Sbjct: 133 SCEGCKGFFKRSVRKNLTY-SCRSNQDCIINKHHR 166
>S77154-1|AAB33999.1| 535|Homo sapiens TINUR protein.
Length = 535
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
NRCQYCR +KC+AVGM ++ VR GR+P + K+
Sbjct: 250 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 288
>L27586-1|AAA21474.1| 615|Homo sapiens TR4 orphan receptor protein.
Length = 615
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
NRCQ+CRLKKC+ +GM ++V+ R P +REK AA
Sbjct: 186 NRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPSNCAA 225
>BC066890-1|AAH66890.1| 535|Homo sapiens nuclear receptor subfamily
4, group A, member 2 protein.
Length = 535
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
NRCQYCR +KC+AVGM ++ VR GR+P + K+
Sbjct: 250 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 288
>BC051670-1|AAH51670.1| 530|Homo sapiens NR2C2 protein protein.
Length = 530
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP---KREKARILAA 455
NRCQ+CRLKKC+ +GM ++V+ R P +REK AA
Sbjct: 186 NRCQFCRLKKCLEMGMKMESVQSKRKPFDVQREKPSNCAA 225
Score = 30.3 bits (65), Expect = 5.9
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFF+RS+++ + Y C NQ C I + +R
Sbjct: 152 SCEGCKGFFKRSVRKNLTY-SCRSNQDCIINKHHR 185
>BC009288-1|AAH09288.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 2 protein.
Length = 598
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
NRCQYCR +KC+AVGM ++ VR GR+P + K+
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 351
>AK223625-1|BAD97345.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 2 isoform a variant protein.
Length = 598
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
NRCQYCR +KC+AVGM ++ VR GR+P + K+
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 351
>AC074099-1|AAY24203.1| 598|Homo sapiens unknown protein.
Length = 598
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
NRCQYCR +KC+AVGM ++ VR GR+P + K+
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 351
>AB019433-1|BAA77328.1| 598|Homo sapiens T-cell nuclear receptor
NOT (Nurr1) protein.
Length = 598
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
NRCQYCR +KC+AVGM ++ VR GR+P + K+
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 351
>AB017586-1|BAA75666.1| 598|Homo sapiens Nurr1 protein.
Length = 598
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 7/39 (17%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKA 440
NRCQYCR +KC+AVGM ++ VR GR+P + K+
Sbjct: 313 NRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKS 351
>Y13276-1|CAA73725.1| 385|Homo sapiens Tailless protein protein.
Length = 385
Score = 41.5 bits (93), Expect = 0.002
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500
N+C+ CRLKKC+ V M++DAV+ R P+ R A+ ++ + + AH +AA
Sbjct: 68 NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 124
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
NRCQYCR +KC++VGM ++ VR GR+P + K+ + Q S
Sbjct: 342 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 390
>U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear
orphan receptor protein.
Length = 587
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
NRCQYCR +KC++VGM ++ VR GR+P + K+ + Q S
Sbjct: 303 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 351
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
NRCQYCR +KC++VGM ++ VR GR+P + K+ + Q S
Sbjct: 400 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 448
>D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein.
Length = 143
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
NRCQYCR +KC++VGM ++ VR GR+P + K+ + Q S
Sbjct: 42 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 90
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
NRCQYCR +KC++VGM ++ VR GR+P + K+ + Q S
Sbjct: 342 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 390
>D49728-1|BAA08565.1| 598|Homo sapiens DNA binding protein protein.
Length = 598
Score = 41.5 bits (93), Expect = 0.002
Identities = 27/72 (37%), Positives = 39/72 (54%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQ+CR +KC+AVGM ++ VR + K + R+ S + A+ A
Sbjct: 317 NRCQFCRFQKCLAVGMVKEVVRTDSL-KGRRGRL------PSKPKQPPDASPA------N 363
Query: 525 LLARVVRAHLDT 560
LL +VRAHLD+
Sbjct: 364 LLTSLVRAHLDS 375
>BT007144-1|AAP35808.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 1 protein.
Length = 598
Score = 41.5 bits (93), Expect = 0.002
Identities = 27/72 (37%), Positives = 39/72 (54%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQ+CR +KC+AVGM ++ VR + K + R+ S + A+ A
Sbjct: 317 NRCQFCRFQKCLAVGMVKEVVRTDSL-KGRRGRL------PSKPKQPPDASPA------N 363
Query: 525 LLARVVRAHLDT 560
LL +VRAHLD+
Sbjct: 364 LLTSLVRAHLDS 375
>BC028031-1|AAH28031.1| 385|Homo sapiens nuclear receptor subfamily
2, group E, member 1 protein.
Length = 385
Score = 41.5 bits (93), Expect = 0.002
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500
N+C+ CRLKKC+ V M++DAV+ R P+ R A+ ++ + + AH +AA
Sbjct: 68 NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 124
>BC016147-1|AAH16147.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 1 protein.
Length = 598
Score = 41.5 bits (93), Expect = 0.002
Identities = 27/72 (37%), Positives = 39/72 (54%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQ+CR +KC+AVGM ++ VR + K + R+ S + A+ A
Sbjct: 317 NRCQFCRFQKCLAVGMVKEVVRTDSL-KGRRGRL------PSKPKQPPDASPA------N 363
Query: 525 LLARVVRAHLDT 560
LL +VRAHLD+
Sbjct: 364 LLTSLVRAHLDS 375
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
NRCQYCR +KC++VGM ++ VR GR+P + K+ + Q S
Sbjct: 342 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 390
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
NRCQYCR +KC++VGM ++ VR GR+P + K+ + Q S
Sbjct: 342 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 390
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
NRCQYCR +KC++VGM ++ VR GR+P + K+ + Q S
Sbjct: 353 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 401
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
NRCQYCR +KC++VGM ++ VR GR+P + K+ + Q S
Sbjct: 342 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 390
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRF-------GRVPKREKARILAAMQQSS 470
NRCQYCR +KC++VGM ++ VR GR+P + K+ + Q S
Sbjct: 353 NRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPS 401
>AL078596-2|CAO03480.1| 422|Homo sapiens nuclear receptor subfamily
2, group E, member 1 protein.
Length = 422
Score = 41.5 bits (93), Expect = 0.002
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500
N+C+ CRLKKC+ V M++DAV+ R P+ R A+ ++ + + AH +AA
Sbjct: 105 NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 161
>AL078596-1|CAB75626.1| 385|Homo sapiens nuclear receptor subfamily
2, group E, member 1 protein.
Length = 385
Score = 41.5 bits (93), Expect = 0.002
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500
N+C+ CRLKKC+ V M++DAV+ R P+ R A+ ++ + + AH +AA
Sbjct: 68 NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 124
>AK131566-1|BAD18699.1| 652|Homo sapiens protein ( Homo sapiens
cDNA FLJ16818 fis, clone TRACH1000193, highly similar
to Orphan nuclear receptor HMR. ).
Length = 652
Score = 41.5 bits (93), Expect = 0.002
Identities = 27/72 (37%), Positives = 39/72 (54%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQ+CR +KC+AVGM ++ VR + K + R+ S + A+ A
Sbjct: 371 NRCQFCRFQKCLAVGMVKEVVRTDSL-KGRRGRL------PSKPKQPPDASPA------N 417
Query: 525 LLARVVRAHLDT 560
LL +VRAHLD+
Sbjct: 418 LLTSLVRAHLDS 429
>AK131541-1|BAD18677.1| 422|Homo sapiens protein ( Homo sapiens
cDNA FLJ16774 fis, clone BRCAN2019772, highly similar
to Orphan nuclear receptor NR2E1. ).
Length = 422
Score = 41.5 bits (93), Expect = 0.002
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500
N+C+ CRLKKC+ V M++DAV+ R P+ R A+ ++ + + AH +AA
Sbjct: 105 NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 161
>AF411525-1|AAL05871.1| 385|Homo sapiens nuclear receptor subfamily
2 group E member 1 protein.
Length = 385
Score = 41.5 bits (93), Expect = 0.002
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500
N+C+ CRLKKC+ V M++DAV+ R P+ R A+ ++ + + AH +AA
Sbjct: 68 NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 124
>AF220532-1|AAG31945.1| 385|Homo sapiens orphan nuclear receptor
protein.
Length = 385
Score = 41.5 bits (93), Expect = 0.002
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM-----QQSSSSRAHEQAAA 500
N+C+ CRLKKC+ V M++DAV+ R P+ R A+ ++ + + AH +AA
Sbjct: 68 NQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAA 124
>X55074-2|CAB57886.1| 490|Homo sapiens thyroid hormone receptor
alpha 2 protein.
Length = 490
Score = 41.1 bits (92), Expect = 0.003
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
S V +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95 SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125
>X55074-1|CAA38899.1| 410|Homo sapiens thyroid hormone receptor
alpha 1 protein.
Length = 410
Score = 41.1 bits (92), Expect = 0.003
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
S V +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95 SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125
>X55005-1|CAA38749.1| 410|Homo sapiens thyriod hormone receptor
alpha 1, THRA1 protein.
Length = 410
Score = 41.1 bits (92), Expect = 0.003
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
S V +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95 SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125
>M24899-1|AAA35783.1| 490|Homo sapiens triiodothyronine receptor
protein.
Length = 490
Score = 41.1 bits (92), Expect = 0.003
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
S V +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95 SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125
>M24748-2|AAA66021.1| 410|Homo sapiens thyroid receptor alpha-1
protein.
Length = 410
Score = 41.1 bits (92), Expect = 0.003
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
S V +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95 SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125
>L13740-1|AAA36763.1| 598|Homo sapiens TR3 orphan receptor protein.
Length = 598
Score = 41.1 bits (92), Expect = 0.003
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQ---SSSSRAHEQAAAAELDD 515
NRCQ+CR +KC+AVGM ++ VR + K + R+ + +Q +S + A LD
Sbjct: 317 NRCQFCRFQKCLAVGMVKEVVRTDSL-KGRRGRLPSKPKQPPDASPANLLTSLVLAHLDS 375
Query: 516 AP 521
P
Sbjct: 376 GP 377
>J03239-1|AAA61176.1| 490|Homo sapiens thyroid hormone receptor
protein.
Length = 490
Score = 41.1 bits (92), Expect = 0.003
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
S V +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95 SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125
>CR541915-1|CAG46713.1| 410|Homo sapiens THRA protein.
Length = 410
Score = 41.1 bits (92), Expect = 0.003
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
S V +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95 SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125
>BC035137-1|AAH35137.1| 451|Homo sapiens THRA protein protein.
Length = 451
Score = 41.1 bits (92), Expect = 0.003
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
S V +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95 SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125
>BC008851-1|AAH08851.1| 410|Homo sapiens THRA protein protein.
Length = 410
Score = 41.1 bits (92), Expect = 0.003
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
S V +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95 SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125
>BC002728-1|AAH02728.1| 490|Homo sapiens thyroid hormone receptor,
alpha (erythroblastic leukemia viral (v-erb-a) oncoge
protein.
Length = 490
Score = 41.1 bits (92), Expect = 0.003
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
S V +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95 SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125
>BC000261-1|AAH00261.1| 490|Homo sapiens thyroid hormone receptor,
alpha (erythroblastic leukemia viral (v-erb-a) oncoge
protein.
Length = 490
Score = 41.1 bits (92), Expect = 0.003
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
S V +T N+CQ CR KKCIAVGM+ D V
Sbjct: 95 SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 125
>AB209346-1|BAD92583.1| 397|Homo sapiens thyroid hormone receptor,
alpha isoform 1 variant protein.
Length = 397
Score = 41.1 bits (92), Expect = 0.003
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
S V +T N+CQ CR KKCIAVGM+ D V
Sbjct: 82 SCCVIDKITRNQCQLCRFKKCIAVGMAMDLV 112
>CR456704-1|CAG32985.1| 598|Homo sapiens NR4A1 protein.
Length = 598
Score = 40.3 bits (90), Expect = 0.006
Identities = 27/72 (37%), Positives = 38/72 (52%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQ+CR +KC+AVGM ++ VR + K + R+ S + A A
Sbjct: 317 NRCQFCRFQKCLAVGMVKEVVRTDSL-KGRRGRL------PSKPKQPPDAFPA------N 363
Query: 525 LLARVVRAHLDT 560
LL +VRAHLD+
Sbjct: 364 LLTSLVRAHLDS 375
>Y00479-1|CAA68539.1| 490|Homo sapiens protein ( H.sapiens mRNA for
thyroid hormone receptor. ).
Length = 490
Score = 38.7 bits (86), Expect = 0.017
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAV 407
S V +T N+CQ CR KKCIAV M+ D V
Sbjct: 95 SCCVIDKITRNQCQLCRFKKCIAVAMAMDLV 125
>X04707-1|CAA28412.1| 456|Homo sapiens put.thyroid hormone receptor
protein.
Length = 456
Score = 38.3 bits (85), Expect = 0.022
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV--RFGRVPKR---EKARILAAMQQSSSSRAHEQAAA 500
+T N+CQ CR KKCI VGM+ D V R+ KR E+ R ++ S H+
Sbjct: 151 VTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEPT 210
Query: 501 AELDDAPRLLARVVRAHLDT 560
D+ L+ V AH+ T
Sbjct: 211 ---DEEWELIKTVTEAHVAT 227
>M26747-1|AAA35677.1| 456|Homo sapiens c-erbA protein.
Length = 456
Score = 38.3 bits (85), Expect = 0.022
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV--RFGRVPKR---EKARILAAMQQSSSSRAHEQAAA 500
+T N+CQ CR KKCI VGM+ D V R+ KR E+ R ++ S H+
Sbjct: 151 VTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEPT 210
Query: 501 AELDDAPRLLARVVRAHLDT 560
D+ L+ V AH+ T
Sbjct: 211 ---DEEWELIKTVTEAHVAT 227
>BC106930-1|AAI06931.1| 461|Homo sapiens THRB protein protein.
Length = 461
Score = 38.3 bits (85), Expect = 0.022
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV--RFGRVPKR---EKARILAAMQQSSSSRAHEQAAA 500
+T N+CQ CR KKCI VGM+ D V R+ KR E+ R ++ S H+
Sbjct: 156 VTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEPT 215
Query: 501 AELDDAPRLLARVVRAHLDT 560
D+ L+ V AH+ T
Sbjct: 216 ---DEEWELIKTVTEAHVAT 232
>BC106929-1|AAI06930.1| 461|Homo sapiens thyroid hormone receptor,
beta (erythroblastic leukemia viral (v-erb-a) oncogen
protein.
Length = 461
Score = 38.3 bits (85), Expect = 0.022
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAV--RFGRVPKR---EKARILAAMQQSSSSRAHEQAAA 500
+T N+CQ CR KKCI VGM+ D V R+ KR E+ R ++ S H+
Sbjct: 156 VTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEPT 215
Query: 501 AELDDAPRLLARVVRAHLDT 560
D+ L+ V AH+ T
Sbjct: 216 ---DEEWELIKTVTEAHVAT 232
>Z49825-1|CAA89989.1| 504|Homo sapiens hepatocyte nuclear factor 4
alpha (HNF4alpha4) protein.
Length = 504
Score = 37.9 bits (84), Expect = 0.029
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 140 NQCRYCRLKKCFRAGMKKEAVQ 161
Score = 29.9 bits (64), Expect = 7.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
SCD +GFFRRS+++ Y C ++QC + + R +K R ++ R
Sbjct: 106 SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 164
Query: 416 SCTQTRESAYPRS 454
TR S+Y S
Sbjct: 165 DRISTRRSSYEDS 177
>X87872-1|CAA61135.1| 408|Homo sapiens Hepatocyte nuclear factor 4C
protein.
Length = 408
Score = 37.9 bits (84), Expect = 0.029
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 101 NQCRYCRLKKCFRAGMKKEAVQ 122
Score = 29.9 bits (64), Expect = 7.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
SCD +GFFRRS+++ Y C ++QC + + R +K R ++ R
Sbjct: 67 SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 125
Query: 416 SCTQTRESAYPRS 454
TR S+Y S
Sbjct: 126 DRISTRRSSYEDS 138
>X87871-1|CAA61134.1| 465|Homo sapiens Hepatocyte nuclear factor 4B
protein.
Length = 465
Score = 37.9 bits (84), Expect = 0.029
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 101 NQCRYCRLKKCFRAGMKKEAVQ 122
Score = 29.9 bits (64), Expect = 7.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
SCD +GFFRRS+++ Y C ++QC + + R +K R ++ R
Sbjct: 67 SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 125
Query: 416 SCTQTRESAYPRS 454
TR S+Y S
Sbjct: 126 DRISTRRSSYEDS 138
>X87870-1|CAA61133.1| 455|Homo sapiens Hepatocyte nuclear factor 4A
protein.
Length = 455
Score = 37.9 bits (84), Expect = 0.029
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 101 NQCRYCRLKKCFRAGMKKEAVQ 122
Score = 29.9 bits (64), Expect = 7.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
SCD +GFFRRS+++ Y C ++QC + + R +K R ++ R
Sbjct: 67 SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 125
Query: 416 SCTQTRESAYPRS 454
TR S+Y S
Sbjct: 126 DRISTRRSSYEDS 138
>X76930-1|CAA54248.1| 465|Homo sapiens hepatocyte nuclear factor 4
protein.
Length = 465
Score = 37.9 bits (84), Expect = 0.029
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 101 NQCRYCRLKKCFRAGMKKEAVQ 122
Score = 29.9 bits (64), Expect = 7.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
SCD +GFFRRS+++ Y C ++QC + + R +K R ++ R
Sbjct: 67 SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 125
Query: 416 SCTQTRESAYPRS 454
TR S+Y S
Sbjct: 126 DRISTRRSSYEDS 138
>U72969-1|AAB48082.1| 516|Homo sapiens hepatocyte nuclear factor
4-alpha protein.
Length = 516
Score = 37.9 bits (84), Expect = 0.029
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 152 NQCRYCRLKKCFRAGMKKEAVQ 173
Score = 29.9 bits (64), Expect = 7.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
SCD +GFFRRS+++ Y C ++QC + + R +K R ++ R
Sbjct: 118 SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 176
Query: 416 SCTQTRESAYPRS 454
TR S+Y S
Sbjct: 177 DRISTRRSSYEDS 189
>U72967-1|AAB48083.1| 408|Homo sapiens hepatocyte nuclear factor
4-alpha protein.
Length = 408
Score = 37.9 bits (84), Expect = 0.029
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 101 NQCRYCRLKKCFRAGMKKEAVQ 122
Score = 29.9 bits (64), Expect = 7.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
SCD +GFFRRS+++ Y C ++QC + + R +K R ++ R
Sbjct: 67 SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 125
Query: 416 SCTQTRESAYPRS 454
TR S+Y S
Sbjct: 126 DRISTRRSSYEDS 138
>EF591040-1|ABQ52204.1| 474|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 474
Score = 37.9 bits (84), Expect = 0.029
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131
Score = 29.9 bits (64), Expect = 7.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
SCD +GFFRRS+++ Y C ++QC + + R +K R ++ R
Sbjct: 76 SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 134
Query: 416 SCTQTRESAYPRS 454
TR S+Y S
Sbjct: 135 DRISTRRSSYEDS 147
>DQ356894-1|ABC97372.1| 186|Homo sapiens peroxisome proliferative
acitvated receptor gamma protein.
Length = 186
Score = 37.9 bits (84), Expect = 0.029
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRD 401
N+CQYCR +KC+AVGMS +
Sbjct: 160 NKCQYCRFQKCLAVGMSHN 178
>AY680698-1|AAT91239.1| 395|Homo sapiens hepatocyte nuclear factor
4 alpha, transcript variant 9 protein.
Length = 395
Score = 37.9 bits (84), Expect = 0.029
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 88 NQCRYCRLKKCFRAGMKKEAVQ 109
Score = 29.9 bits (64), Expect = 7.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
SCD +GFFRRS+++ Y C ++QC + + R +K R ++ R
Sbjct: 54 SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 112
Query: 416 SCTQTRESAYPRS 454
TR S+Y S
Sbjct: 113 DRISTRRSSYEDS 125
>AY680697-1|AAT91238.1| 452|Homo sapiens hepatocyte nuclear factor
4 alpha, transcript variant 8 protein.
Length = 452
Score = 37.9 bits (84), Expect = 0.029
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 88 NQCRYCRLKKCFRAGMKKEAVQ 109
Score = 29.9 bits (64), Expect = 7.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
SCD +GFFRRS+++ Y C ++QC + + R +K R ++ R
Sbjct: 54 SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 112
Query: 416 SCTQTRESAYPRS 454
TR S+Y S
Sbjct: 113 DRISTRRSSYEDS 125
>AY680696-1|AAT91237.1| 442|Homo sapiens hepatocyte nuclear factor
4 alpha, transcript variant 7 protein.
Length = 442
Score = 37.9 bits (84), Expect = 0.029
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 88 NQCRYCRLKKCFRAGMKKEAVQ 109
Score = 29.9 bits (64), Expect = 7.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
SCD +GFFRRS+++ Y C ++QC + + R +K R ++ R
Sbjct: 54 SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 112
Query: 416 SCTQTRESAYPRS 454
TR S+Y S
Sbjct: 113 DRISTRRSSYEDS 125
>AL132772-3|CAI18857.1| 467|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 467
Score = 37.9 bits (84), Expect = 0.029
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 103 NQCRYCRLKKCFRAGMKKEAVQ 124
Score = 29.9 bits (64), Expect = 7.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
SCD +GFFRRS+++ Y C ++QC + + R +K R ++ R
Sbjct: 69 SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 127
Query: 416 SCTQTRESAYPRS 454
TR S+Y S
Sbjct: 128 DRISTRRSSYEDS 140
>AL132772-2|CAC01303.1| 474|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 474
Score = 37.9 bits (84), Expect = 0.029
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131
Score = 29.9 bits (64), Expect = 7.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
SCD +GFFRRS+++ Y C ++QC + + R +K R ++ R
Sbjct: 76 SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 134
Query: 416 SCTQTRESAYPRS 454
TR S+Y S
Sbjct: 135 DRISTRRSSYEDS 147
>AL132772-1|CAI18856.1| 417|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 417
Score = 37.9 bits (84), Expect = 0.029
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRLKKC GM ++AV+
Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQ 131
Score = 29.9 bits (64), Expect = 7.8
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNEQRCCA-IR 415
SCD +GFFRRS+++ Y C ++QC + + R +K R ++ R
Sbjct: 76 SCDGCKGFFRRSVRKNHMY-SCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER 134
Query: 416 SCTQTRESAYPRS 454
TR S+Y S
Sbjct: 135 DRISTRRSSYEDS 147
>U93553-1|AAD03155.1| 500|Homo sapiens alpha1-fetoprotein
transcription factor protein.
Length = 500
Score = 37.5 bits (83), Expect = 0.039
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC YCR +KC++VGM +AVR R+
Sbjct: 97 RCPYCRFQKCLSVGMKLEAVRADRM 121
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q +Y C +NQ C I + R+ P +K
Sbjct: 67 KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 105
>U80251-1|AAC78727.1| 495|Homo sapiens hepatocytic transcription
factor protein.
Length = 495
Score = 37.5 bits (83), Expect = 0.039
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC YCR +KC++VGM +AVR R+
Sbjct: 91 RCPYCRFQKCLSVGMKLEAVRADRM 115
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q +Y C +NQ C I + R+ P +K
Sbjct: 61 KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 99
>D88155-1|BAA13546.1| 461|Homo sapiens AdBP4 protein.
Length = 461
Score = 37.5 bits (83), Expect = 0.039
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRV 422
NRC +CR +KC+ VGM +AVR R+
Sbjct: 63 NRCPFCRFQKCLTVGMRLEAVRADRM 88
Score = 31.9 bits (69), Expect = 1.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q Y CT++Q C I + R P +K
Sbjct: 34 KGFFKRTVQNNKHYT-CTESQSCKIDKTQRNRCPFCRFQK 72
>BC118652-1|AAI18653.1| 495|Homo sapiens nuclear receptor subfamily
5, group A, member 2 protein.
Length = 495
Score = 37.5 bits (83), Expect = 0.039
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC YCR +KC++VGM +AVR R+
Sbjct: 91 RCPYCRFQKCLSVGMKLEAVRADRM 115
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q +Y C +NQ C I + R+ P +K
Sbjct: 61 KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 99
>BC118571-1|AAI18572.1| 495|Homo sapiens nuclear receptor subfamily
5, group A, member 2 protein.
Length = 495
Score = 37.5 bits (83), Expect = 0.039
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC YCR +KC++VGM +AVR R+
Sbjct: 91 RCPYCRFQKCLSVGMKLEAVRADRM 115
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q +Y C +NQ C I + R+ P +K
Sbjct: 61 KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 99
>AF190464-2|AAG17124.1| 495|Homo sapiens hepatocytic transcription
factor B1F protein.
Length = 495
Score = 37.5 bits (83), Expect = 0.039
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC YCR +KC++VGM +AVR R+
Sbjct: 91 RCPYCRFQKCLSVGMKLEAVRADRM 115
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q +Y C +NQ C I + R+ P +K
Sbjct: 61 KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 99
>AF190464-1|AAG17125.1| 541|Homo sapiens hepatocytic transcription
factor isoform B1F-2 protein.
Length = 541
Score = 37.5 bits (83), Expect = 0.039
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC YCR +KC++VGM +AVR R+
Sbjct: 137 RCPYCRFQKCLSVGMKLEAVRADRM 161
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q +Y C +NQ C I + R+ P +K
Sbjct: 107 KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 145
>AF146343-1|AAD37378.1| 495|Homo sapiens CYP7A promoter binding
factor protein.
Length = 495
Score = 37.5 bits (83), Expect = 0.039
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC YCR +KC++VGM +AVR R+
Sbjct: 91 RCPYCRFQKCLSVGMKLEAVRADRM 115
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q +Y C +NQ C I + R+ P +K
Sbjct: 61 KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 99
>AF124247-1|AAD26565.1| 541|Homo sapiens hepatocytic transcription
factor hB1F-2 protein.
Length = 541
Score = 37.5 bits (83), Expect = 0.039
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC YCR +KC++VGM +AVR R+
Sbjct: 137 RCPYCRFQKCLSVGMKLEAVRADRM 161
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q +Y C +NQ C I + R+ P +K
Sbjct: 107 KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 145
>AF049102-1|AAD03248.1| 323|Homo sapiens alpha1-fetoprotein
transcription factor short variant protein.
Length = 323
Score = 37.5 bits (83), Expect = 0.039
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC YCR +KC++VGM +AVR R+
Sbjct: 57 RCPYCRFQKCLSVGMKLEAVRADRM 81
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q +Y C +NQ C I + R+ P +K
Sbjct: 27 KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 65
>AB019246-1|BAA34092.1| 541|Homo sapiens FTZ-F1 related protein
protein.
Length = 541
Score = 37.5 bits (83), Expect = 0.039
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC YCR +KC++VGM +AVR R+
Sbjct: 137 RCPYCRFQKCLSVGMKLEAVRADRM 161
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q +Y C +NQ C I + R+ P +K
Sbjct: 107 KGFFKRTVQNNKRYT-CIENQNCQIDKTQRKRCPYCRFQK 145
>Z49826-1|CAA89990.2| 408|Homo sapiens hepatocyte nuclear factor 4
gamma (HNF4gamma) protein.
Length = 408
Score = 36.7 bits (81), Expect = 0.068
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRL+KC GM ++AV+
Sbjct: 62 NQCRYCRLRKCFRAGMKKEAVQ 83
>BC105011-1|AAI05012.1| 408|Homo sapiens HNF4G protein protein.
Length = 408
Score = 36.7 bits (81), Expect = 0.068
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRL+KC GM ++AV+
Sbjct: 62 NQCRYCRLRKCFRAGMKKEAVQ 83
>BC105009-1|AAI05010.1| 408|Homo sapiens HNF4G protein protein.
Length = 408
Score = 36.7 bits (81), Expect = 0.068
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRL+KC GM ++AV+
Sbjct: 62 NQCRYCRLRKCFRAGMKKEAVQ 83
>AF133504-1|AAF00110.1| 408|Homo sapiens hepatocyte nuclear factor
4 gamma protein.
Length = 408
Score = 36.7 bits (81), Expect = 0.068
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRL+KC GM ++AV+
Sbjct: 62 NQCRYCRLRKCFRAGMKKEAVQ 83
>CR542091-1|CAG46888.1| 408|Homo sapiens HNF4G protein.
Length = 408
Score = 35.5 bits (78), Expect = 0.16
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+C+YCRL+KC GM + AV+
Sbjct: 62 NQCRYCRLRKCFRAGMKKKAVQ 83
>U76388-1|AAB53105.1| 461|Homo sapiens steroidogenic factor 1
protein.
Length = 461
Score = 35.1 bits (77), Expect = 0.21
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC +CR +KC+ VGM +AVR R+
Sbjct: 64 RCPFCRFQKCLTVGMRLEAVRADRM 88
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q Y CT++Q C I + R+ P +K
Sbjct: 34 KGFFKRTVQNNKHYT-CTESQSCKIDKTQRKRCPFCRFQK 72
>BC032501-1|AAH32501.1| 461|Homo sapiens nuclear receptor subfamily
5, group A, member 1 protein.
Length = 461
Score = 35.1 bits (77), Expect = 0.21
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC +CR +KC+ VGM +AVR R+
Sbjct: 64 RCPFCRFQKCLTVGMRLEAVRADRM 88
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q Y CT++Q C I + R+ P +K
Sbjct: 34 KGFFKRTVQNNKHYT-CTESQSCKIDKTQRKRCPFCRFQK 72
>AL354979-3|CAI10959.1| 461|Homo sapiens nuclear receptor subfamily
5, group A, member 1 protein.
Length = 461
Score = 35.1 bits (77), Expect = 0.21
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC +CR +KC+ VGM +AVR R+
Sbjct: 64 RCPFCRFQKCLTVGMRLEAVRADRM 88
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q Y CT++Q C I + R+ P +K
Sbjct: 34 KGFFKRTVQNNKHYT-CTESQSCKIDKTQRKRCPFCRFQK 72
>AL354979-2|CAI10958.1| 178|Homo sapiens nuclear receptor subfamily
5, group A, member 1 protein.
Length = 178
Score = 35.1 bits (77), Expect = 0.21
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC +CR +KC+ VGM +AVR R+
Sbjct: 64 RCPFCRFQKCLTVGMRLEAVRADRM 88
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q Y CT++Q C I + R+ P +K
Sbjct: 34 KGFFKRTVQNNKHYT-CTESQSCKIDKTQRKRCPFCRFQK 72
>AL137846-2|CAI10872.1| 461|Homo sapiens nuclear receptor subfamily
5, group A, member 1 protein.
Length = 461
Score = 35.1 bits (77), Expect = 0.21
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC +CR +KC+ VGM +AVR R+
Sbjct: 64 RCPFCRFQKCLTVGMRLEAVRADRM 88
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEK 373
+GFF+R++Q Y CT++Q C I + R+ P +K
Sbjct: 34 KGFFKRTVQNNKHYT-CTESQSCKIDKTQRKRCPFCRFQK 72
>X67482-1|CAA47824.1| 427|Homo sapiens HL-60 1,25-dihydroxyvitamin
D-3 receptor protein.
Length = 427
Score = 34.3 bits (75), Expect = 0.36
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
CQ CRLK+C+ +GM ++ + +R++ IL ++ + + + ++ R++
Sbjct: 76 CQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSLRPKLS---EEQQRII 132
Query: 531 ARVVRAHLDT 560
A ++ AH T
Sbjct: 133 AILLDAHHKT 142
>J03258-1|AAA61273.1| 427|Homo sapiens VDR protein.
Length = 427
Score = 34.3 bits (75), Expect = 0.36
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
CQ CRLK+C+ +GM ++ + +R++ IL ++ + + + ++ R++
Sbjct: 76 CQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSLRPKLS---EEQQRII 132
Query: 531 ARVVRAHLDT 560
A ++ AH T
Sbjct: 133 AILLDAHHKT 142
>BC060832-1|AAH60832.1| 427|Homo sapiens VDR protein protein.
Length = 427
Score = 34.3 bits (75), Expect = 0.36
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
CQ CRLK+C+ +GM ++ + +R++ IL ++ + + + ++ R++
Sbjct: 76 CQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSLRPKLS---EEQQRII 132
Query: 531 ARVVRAHLDT 560
A ++ AH T
Sbjct: 133 AILLDAHHKT 142
>AY342401-1|AAP88938.1| 424|Homo sapiens vitamin D
(1,25-dihydroxyvitamin D3) receptor protein.
Length = 424
Score = 34.3 bits (75), Expect = 0.36
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
CQ CRLK+C+ +GM ++ + +R++ IL ++ + + + ++ R++
Sbjct: 73 CQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSLRPKLS---EEQQRII 129
Query: 531 ARVVRAHLDT 560
A ++ AH T
Sbjct: 130 AILLDAHHKT 139
>AF026260-1|AAB95155.1| 427|Homo sapiens vitamin D receptor
protein.
Length = 427
Score = 34.3 bits (75), Expect = 0.36
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
CQ CRLK+C+ +GM ++ + +R++ IL ++ + + + ++ R++
Sbjct: 76 CQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSLRPKLS---EEQQRII 132
Query: 531 ARVVRAHLDT 560
A ++ AH T
Sbjct: 133 AILLDAHHKT 142
>AB002168-1|BAA83389.1| 427|Homo sapiens vitamin D receptor
protein.
Length = 427
Score = 34.3 bits (75), Expect = 0.36
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
CQ CRLK+C+ +GM ++ + +R++ IL ++ + + + ++ R++
Sbjct: 76 CQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEEEALKDSLRPKLS---EEQQRII 132
Query: 531 ARVVRAHLDT 560
A ++ AH T
Sbjct: 133 AILLDAHHKT 142
>X51417-1|CAA35779.1| 433|Homo sapiens protein ( Human mRNA for
steroid hormone receptor hERR2. ).
Length = 433
Score = 33.9 bits (74), Expect = 0.48
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
CQ CR KC+ VGM ++ VR RV
Sbjct: 155 CQACRFMKCLKVGMLKEGVRLDRV 178
>X51416-1|CAA35778.1| 521|Homo sapiens protein ( Human mRNA for
steroid hormone receptor hERR1. ).
Length = 521
Score = 33.9 bits (74), Expect = 0.48
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
CQ CR KC+ VGM ++ VR RV
Sbjct: 228 CQACRFTKCLRVGMLKEGVRLDRV 251
>L38487-1|AAB17015.1| 481|Homo sapiens estrogen receptor-related
protein protein.
Length = 481
Score = 33.9 bits (74), Expect = 0.48
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
CQ CR KC+ VGM ++ VR RV
Sbjct: 190 CQACRFTKCLRVGMLKEGVRLDRV 213
>DQ514553-1|ABF47104.1| 423|Homo sapiens estrogen-related receptor
alpha protein.
Length = 423
Score = 33.9 bits (74), Expect = 0.48
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
CQ CR KC+ VGM ++ VR RV
Sbjct: 131 CQACRFTKCLRVGMLKEGVRLDRV 154
>BT019411-1|AAV38218.1| 447|Homo sapiens nuclear receptor subfamily
1, group H, member 3 protein.
Length = 447
Score = 33.9 bits (74), Expect = 0.48
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRL 527
+CQ CRL+KC GM + V E+ R L +++ +AH + P++
Sbjct: 149 KCQECRLRKCRQAGMREECVL-----SEEQIR-LKKLKRQEEEQAHATSLPPRASSPPQI 202
Query: 528 LARVVRAHLDTCE 566
L ++ R L E
Sbjct: 203 LPQLSREQLGMIE 215
>BC131517-1|AAI31518.1| 503|Homo sapiens ESRRB protein protein.
Length = 503
Score = 33.9 bits (74), Expect = 0.48
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
CQ CR KC+ VGM ++ VR RV
Sbjct: 155 CQACRFMKCLKVGMLKEGVRLDRV 178
>BC093722-1|AAH93722.1| 423|Homo sapiens estrogen-related receptor
alpha protein.
Length = 423
Score = 33.9 bits (74), Expect = 0.48
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
CQ CR KC+ VGM ++ VR RV
Sbjct: 131 CQACRFTKCLRVGMLKEGVRLDRV 154
>BC093720-1|AAH93720.1| 423|Homo sapiens estrogen-related receptor
alpha protein.
Length = 423
Score = 33.9 bits (74), Expect = 0.48
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
CQ CR KC+ VGM ++ VR RV
Sbjct: 131 CQACRFTKCLRVGMLKEGVRLDRV 154
>BC092470-1|AAH92470.1| 423|Homo sapiens ESRRA protein protein.
Length = 423
Score = 33.9 bits (74), Expect = 0.48
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
CQ CR KC+ VGM ++ VR RV
Sbjct: 131 CQACRFTKCLRVGMLKEGVRLDRV 154
>BC064700-1|AAH64700.1| 442|Homo sapiens ESRRG protein protein.
Length = 442
Score = 33.9 bits (74), Expect = 0.48
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV 422
CQ CR KC+ VGM ++ VR RV
Sbjct: 157 CQACRFMKCLKVGMLKEGVRLDRV 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,287,441
Number of Sequences: 237096
Number of extensions: 1464914
Number of successful extensions: 4608
Number of sequences better than 10.0: 315
Number of HSP's better than 10.0 without gapping: 4201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4608
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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