Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0965
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82071-5|CAB04919.2| 514|Caenorhabditis elegans Hypothetical pr... 79 3e-15
AY204180-1|AAO39184.1| 514|Caenorhabditis elegans nuclear recep... 79 3e-15
AL110478-13|CAC14397.1| 514|Caenorhabditis elegans Hypothetical... 79 3e-15
Z71258-12|CAJ30220.1| 555|Caenorhabditis elegans Hypothetical p... 63 1e-10
Z71258-10|CAJ30218.1| 439|Caenorhabditis elegans Hypothetical p... 63 1e-10
Z71258-9|CAI46548.1| 437|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z71258-8|CAD30427.1| 553|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z71258-7|CAA95782.2| 588|Caenorhabditis elegans Hypothetical pr... 62 3e-10
U51136-1|AAA96057.1| 553|Caenorhabditis elegans CHR3 protein. 62 3e-10
U13075-1|AAA96983.1| 553|Caenorhabditis elegans steroid hormone... 62 3e-10
AF332203-1|AAK17974.1| 588|Caenorhabditis elegans nuclear recep... 62 3e-10
AF332202-1|AAK17973.1| 573|Caenorhabditis elegans nuclear recep... 62 3e-10
Z82071-3|CAH04734.1| 336|Caenorhabditis elegans Hypothetical pr... 48 4e-06
AY204181-1|AAO39185.1| 336|Caenorhabditis elegans nuclear recep... 48 4e-06
U41536-4|AAK39238.2| 419|Caenorhabditis elegans Defective fasci... 44 1e-04
AF176087-1|AAD55066.1| 419|Caenorhabditis elegans nuclear hormo... 44 1e-04
Z73103-7|CAA97428.1| 416|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z50858-5|CAA90722.1| 534|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U13074-1|AAA96982.1| 534|Caenorhabditis elegans steroid hormone... 43 2e-04
AY204176-1|AAO39180.1| 409|Caenorhabditis elegans nuclear recep... 43 2e-04
AF273840-1|AAG15187.1| 553|Caenorhabditis elegans sex-1 protein. 43 2e-04
AF049869-1|AAC77795.1| 556|Caenorhabditis elegans SEX-1 protein. 43 2e-04
AF273829-1|AAG15178.1| 372|Caenorhabditis elegans nuclear recep... 42 3e-04
AC024776-16|AAL32242.1| 363|Caenorhabditis elegans Nuclear horm... 42 3e-04
U37424-1|AAA80355.1| 359|Caenorhabditis elegans NHR-2 protein. 42 4e-04
AF332201-1|AAK17972.1| 474|Caenorhabditis elegans nuclear recep... 42 4e-04
AF332200-1|AAK17971.1| 453|Caenorhabditis elegans nuclear recep... 42 4e-04
AF000195-4|AAC24271.2| 359|Caenorhabditis elegans Nuclear hormo... 42 4e-04
AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein. 41 6e-04
AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 41 6e-04
Z83235-7|CAD57703.1| 486|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z83235-6|CAD57702.1| 501|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z83235-5|CAD21653.1| 476|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z83235-4|CAB05772.1| 477|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical pr... 41 8e-04
AF332206-1|AAK17977.1| 381|Caenorhabditis elegans nuclear recep... 41 8e-04
AF273795-1|AAG15143.1| 475|Caenorhabditis elegans nuclear recep... 41 8e-04
AF273793-1|AAG15141.1| 474|Caenorhabditis elegans nuclear recep... 41 8e-04
AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear recep... 41 8e-04
Z36237-1|CAA85271.2| 619|Caenorhabditis elegans Hypothetical pr... 40 0.002
U13076-1|AAA96984.1| 463|Caenorhabditis elegans steroid hormone... 40 0.002
EF601077-1|ABQ96199.1| 357|Caenorhabditis elegans UNC-55b isofo... 40 0.002
AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein. 40 0.002
AY204167-1|AAO39171.1| 619|Caenorhabditis elegans nuclear recep... 40 0.002
AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical ... 40 0.002
AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear recep... 40 0.002
AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear recep... 40 0.002
AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear recep... 40 0.002
AF273770-1|AAG15119.1| 469|Caenorhabditis elegans nuclear recep... 40 0.002
AF083224-1|AAD03682.1| 619|Caenorhabditis elegans nuclear recep... 40 0.002
Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical pr... 38 0.004
AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear recep... 38 0.004
AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 38 0.006
AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 38 0.006
AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 38 0.006
AF047660-8|AAM54167.1| 526|Caenorhabditis elegans Nuclear hormo... 38 0.006
AF047660-7|AAM54166.1| 577|Caenorhabditis elegans Nuclear hormo... 38 0.006
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 38 0.006
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 38 0.006
AF022970-8|AAB69901.2| 231|Caenorhabditis elegans Nuclear hormo... 38 0.008
U64835-7|AAG24198.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.010
U41542-10|AAX88836.1| 486|Caenorhabditis elegans Nuclear hormon... 37 0.010
U41542-9|AAK39150.3| 542|Caenorhabditis elegans Nuclear hormone... 37 0.010
AY305836-1|AAR11981.1| 487|Caenorhabditis elegans nuclear recep... 37 0.010
AY204202-1|AAO39203.1| 339|Caenorhabditis elegans nuclear recep... 37 0.010
AY204201-1|AAO39202.1| 409|Caenorhabditis elegans nuclear recep... 37 0.010
AY204200-1|AAO39201.1| 304|Caenorhabditis elegans nuclear recep... 37 0.010
AF408754-1|AAO27833.1| 418|Caenorhabditis elegans nuclear recep... 37 0.010
AF273781-1|AAG15130.1| 508|Caenorhabditis elegans nuclear recep... 37 0.010
AC084155-11|AAQ91893.1| 304|Caenorhabditis elegans Nuclear horm... 37 0.010
AC084155-10|AAG23368.3| 418|Caenorhabditis elegans Nuclear horm... 37 0.010
Z82259-10|CAD36480.1| 439|Caenorhabditis elegans Hypothetical p... 36 0.018
Z50004-1|CAA90291.1| 396|Caenorhabditis elegans Hypothetical pr... 36 0.018
U41296-1|AAA93297.1| 579|Caenorhabditis elegans Steroid hormone... 36 0.018
AY204170-1|AAO39174.1| 579|Caenorhabditis elegans nuclear recep... 36 0.018
AL022473-2|CAA18549.2| 439|Caenorhabditis elegans Hypothetical ... 36 0.018
AL021472-1|CAA16299.2| 397|Caenorhabditis elegans Hypothetical ... 36 0.018
AF332211-1|AAK17982.1| 439|Caenorhabditis elegans nuclear recep... 36 0.018
AF067936-1|AAC19212.2| 579|Caenorhabditis elegans Nuclear hormo... 36 0.018
AF022969-1|AAB69894.3| 391|Caenorhabditis elegans Hypothetical ... 36 0.018
AC006675-9|AAK84553.1| 431|Caenorhabditis elegans Hypothetical ... 36 0.018
Z82055-8|CAB04850.2| 463|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z75542-4|CAA99861.1| 424|Caenorhabditis elegans Hypothetical pr... 36 0.024
EF601082-1|ABQ96204.1| 370|Caenorhabditis elegans UNC-55a isofo... 36 0.024
AF332208-1|AAK17979.1| 435|Caenorhabditis elegans nuclear recep... 36 0.024
AC084158-16|AAK68571.2| 347|Caenorhabditis elegans Hypothetical... 36 0.024
Z83102-11|CAB05470.1| 310|Caenorhabditis elegans Hypothetical p... 36 0.032
Z81492-11|CAB04035.1| 310|Caenorhabditis elegans Hypothetical p... 36 0.032
U53154-2|AAC25856.1| 358|Caenorhabditis elegans Hypothetical pr... 36 0.032
U97551-2|AAP13776.1| 434|Caenorhabditis elegans Nuclear hormone... 35 0.042
U97551-1|AAP13775.1| 435|Caenorhabditis elegans Nuclear hormone... 35 0.042
U10438-5|AAA19086.1| 395|Caenorhabditis elegans Nuclear hormone... 35 0.042
AY204168-1|AAO39172.1| 395|Caenorhabditis elegans nuclear recep... 35 0.042
AF273830-1|AAG15179.1| 598|Caenorhabditis elegans nuclear recep... 35 0.042
AC006671-3|AAR30203.1| 235|Caenorhabditis elegans Nuclear hormo... 35 0.042
AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormo... 35 0.042
AC006671-1|AAF39914.2| 593|Caenorhabditis elegans Nuclear hormo... 35 0.042
Z93374-9|CAC70078.1| 116|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z93374-8|CAB07555.1| 359|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z81496-8|CAB04068.1| 498|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z81142-8|CAO82053.1| 370|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z79604-3|CAD36502.1| 817|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z70782-2|CAA94839.1| 387|Caenorhabditis elegans Hypothetical pr... 35 0.055
AL021387-2|CAA16168.1| 463|Caenorhabditis elegans Hypothetical ... 35 0.055
AF332205-1|AAK17976.1| 817|Caenorhabditis elegans nuclear recep... 35 0.055
AF273796-1|AAG15144.1| 116|Caenorhabditis elegans nuclear recep... 35 0.055
AF273769-1|AAG15118.1| 463|Caenorhabditis elegans nuclear recep... 35 0.055
AF083222-1|AAD03680.1| 463|Caenorhabditis elegans nuclear recep... 35 0.055
AC024776-17|ABN43080.1| 365|Caenorhabditis elegans Hypothetical... 35 0.055
Z83109-8|CAB05521.2| 311|Caenorhabditis elegans Hypothetical pr... 34 0.073
Z81531-2|CAB04316.1| 422|Caenorhabditis elegans Hypothetical pr... 34 0.073
Z68222-9|CAE46689.1| 631|Caenorhabditis elegans Hypothetical pr... 34 0.073
Z68222-8|CAC70146.2| 613|Caenorhabditis elegans Hypothetical pr... 34 0.073
Z68217-11|CAE46673.1| 631|Caenorhabditis elegans Hypothetical p... 34 0.073
Z68217-10|CAC70099.2| 613|Caenorhabditis elegans Hypothetical p... 34 0.073
Z68217-4|CAA92467.2| 499|Caenorhabditis elegans Hypothetical pr... 34 0.073
AF273780-1|AAG15129.1| 509|Caenorhabditis elegans nuclear recep... 34 0.073
AF016675-4|AAB66137.1| 356|Caenorhabditis elegans Hypothetical ... 34 0.073
AF022976-16|AAC69076.2| 276|Caenorhabditis elegans Nuclear horm... 34 0.096
AC024776-13|AAK68483.1| 374|Caenorhabditis elegans Nuclear horm... 34 0.096
Z81074-1|CAB03044.2| 492|Caenorhabditis elegans Hypothetical pr... 33 0.13
U97008-3|AAB52308.1| 380|Caenorhabditis elegans Hypothetical pr... 33 0.13
U55365-8|AAA98573.2| 383|Caenorhabditis elegans Hypothetical pr... 33 0.13
AY204177-1|AAO39181.1| 385|Caenorhabditis elegans nuclear recep... 33 0.13
AL022272-2|CAA18351.1| 385|Caenorhabditis elegans Hypothetical ... 33 0.13
AF083223-1|AAD03681.1| 492|Caenorhabditis elegans nuclear recep... 33 0.13
Z70210-8|CAA94154.2| 414|Caenorhabditis elegans Hypothetical pr... 33 0.17
U41559-7|AAV34794.1| 544|Caenorhabditis elegans Nuclear hormone... 33 0.17
U41559-6|AAC24263.1| 583|Caenorhabditis elegans Nuclear hormone... 33 0.17
AY204169-1|AAO39173.1| 414|Caenorhabditis elegans nuclear recep... 33 0.17
AF273779-1|AAG15128.1| 565|Caenorhabditis elegans nuclear recep... 33 0.17
AF273778-1|AAG15127.1| 595|Caenorhabditis elegans nuclear recep... 33 0.17
AF273776-1|AAG15125.1| 583|Caenorhabditis elegans nuclear recep... 33 0.17
AC024776-20|AAK68473.2| 460|Caenorhabditis elegans Nuclear horm... 33 0.17
Z98877-17|CAB11571.1| 389|Caenorhabditis elegans Hypothetical p... 33 0.22
Z83240-1|CAB05815.2| 373|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z82259-8|CAC70072.3| 410|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z81487-4|CAB03998.2| 420|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z75951-1|CAB00091.2| 408|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z68270-10|CAA92572.2| 459|Caenorhabditis elegans Hypothetical p... 33 0.22
Z54270-6|CAA91028.1| 572|Caenorhabditis elegans Hypothetical pr... 33 0.22
U53154-4|AAC25851.1| 346|Caenorhabditis elegans Hypothetical pr... 33 0.22
U41556-12|AAK39191.2| 477|Caenorhabditis elegans Nuclear hormon... 33 0.22
U40160-3|AAA81157.2| 363|Caenorhabditis elegans Nuclear hormone... 33 0.22
AY305848-1|AAR11992.1| 477|Caenorhabditis elegans nuclear recep... 33 0.22
AY305838-1|AAR11983.1| 459|Caenorhabditis elegans nuclear recep... 33 0.22
AY204185-1|AAO39189.1| 400|Caenorhabditis elegans nuclear recep... 33 0.22
AY204178-1|AAO39182.1| 373|Caenorhabditis elegans nuclear recep... 33 0.22
AL032632-15|CAA21593.1| 344|Caenorhabditis elegans Hypothetical... 33 0.22
AL022273-1|CAA18356.1| 344|Caenorhabditis elegans Hypothetical ... 33 0.22
AL022272-4|CAC42310.2| 391|Caenorhabditis elegans Hypothetical ... 33 0.22
AL021497-21|CAA16413.1| 389|Caenorhabditis elegans Hypothetical... 33 0.22
AF273823-1|AAG15172.1| 388|Caenorhabditis elegans nuclear recep... 33 0.22
AF273822-1|AAG15171.1| 387|Caenorhabditis elegans nuclear recep... 33 0.22
AF273821-1|AAG15170.1| 383|Caenorhabditis elegans nuclear recep... 33 0.22
AF179216-1|AAF67040.1| 233|Caenorhabditis elegans NHR-25 protein. 33 0.22
AF179214-1|AAF67038.1| 568|Caenorhabditis elegans NHR-25 alpha ... 33 0.22
AF083227-1|AAD03685.1| 290|Caenorhabditis elegans nuclear recep... 33 0.22
Z81575-8|CAB04634.1| 433|Caenorhabditis elegans Hypothetical pr... 32 0.29
U23518-8|AAO38654.1| 400|Caenorhabditis elegans Nuclear hormone... 32 0.29
U23518-7|AAO38655.1| 440|Caenorhabditis elegans Nuclear hormone... 32 0.29
U23518-6|AAD31548.2| 446|Caenorhabditis elegans Nuclear hormone... 32 0.29
U23518-5|AAO38653.1| 448|Caenorhabditis elegans Nuclear hormone... 32 0.29
U23518-4|ABB88231.1| 450|Caenorhabditis elegans Nuclear hormone... 32 0.29
AL021470-3|CAA16291.2| 414|Caenorhabditis elegans Hypothetical ... 32 0.29
AF273836-1|AAG15184.1| 362|Caenorhabditis elegans nuclear recep... 32 0.29
AF083234-1|AAD03692.1| 400|Caenorhabditis elegans nuclear recep... 32 0.29
AF083233-1|AAD03691.1| 458|Caenorhabditis elegans nuclear recep... 32 0.29
AC024776-15|AAK68482.2| 354|Caenorhabditis elegans Nuclear horm... 32 0.29
Z98877-9|CAB63405.1| 348|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z93374-3|CAB07558.2| 363|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical p... 32 0.39
Z81142-2|CAB03504.1| 337|Caenorhabditis elegans Hypothetical pr... 32 0.39
U50311-7|AAA92311.1| 401|Caenorhabditis elegans Hypothetical pr... 32 0.39
AY204190-1|AAO39194.1| 382|Caenorhabditis elegans nuclear recep... 32 0.39
AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical ... 32 0.39
AF273815-1|AAG15164.1| 365|Caenorhabditis elegans nuclear recep... 32 0.39
AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear recep... 32 0.39
AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear recep... 32 0.39
AF022978-5|AAG24181.2| 382|Caenorhabditis elegans Nuclear hormo... 32 0.39
AF016421-11|AAM45373.2| 417|Caenorhabditis elegans Hypothetical... 32 0.39
AC006675-8|AAK84554.1| 414|Caenorhabditis elegans Hypothetical ... 32 0.39
Z83233-10|CAB05768.2| 364|Caenorhabditis elegans Hypothetical p... 31 0.51
Z81056-6|CAB02906.1| 398|Caenorhabditis elegans Hypothetical pr... 31 0.51
Z70204-5|CAI46566.1| 379|Caenorhabditis elegans Hypothetical pr... 31 0.51
Z70204-4|CAA94114.2| 437|Caenorhabditis elegans Hypothetical pr... 31 0.51
U97008-1|AAB52310.1| 370|Caenorhabditis elegans Hypothetical pr... 31 0.51
AY305832-1|AAR11977.1| 437|Caenorhabditis elegans nuclear recep... 31 0.51
AY305831-1|AAR11976.1| 437|Caenorhabditis elegans nuclear recep... 31 0.51
AF273799-1|AAG15148.1| 365|Caenorhabditis elegans nuclear recep... 31 0.51
AF273798-1|AAG15147.1| 366|Caenorhabditis elegans nuclear recep... 31 0.51
AF273775-1|AAG15124.1| 383|Caenorhabditis elegans nuclear recep... 31 0.51
AF273774-1|AAG15123.1| 433|Caenorhabditis elegans nuclear recep... 31 0.51
AF106581-7|ABC48241.1| 362|Caenorhabditis elegans Nuclear hormo... 31 0.51
AF067942-5|AAG45580.2| 345|Caenorhabditis elegans Hypothetical ... 31 0.51
AF039048-10|AAB94240.2| 421|Caenorhabditis elegans Hypothetical... 31 0.51
Z83233-2|CAB05761.1| 338|Caenorhabditis elegans Hypothetical pr... 31 0.68
AY305847-1|AAR11991.1| 461|Caenorhabditis elegans nuclear recep... 31 0.68
AL132853-2|CAB60441.2| 424|Caenorhabditis elegans Hypothetical ... 31 0.68
AF273797-2|AAG15146.1| 338|Caenorhabditis elegans nuclear recep... 31 0.68
AF099915-4|AAC68773.2| 461|Caenorhabditis elegans Nuclear hormo... 31 0.68
AF016438-3|AAQ62456.1| 173|Caenorhabditis elegans Hypothetical ... 31 0.68
AF016438-2|AAQ62455.1| 407|Caenorhabditis elegans Hypothetical ... 31 0.68
AF016438-1|AAB65895.1| 406|Caenorhabditis elegans Nuclear hormo... 31 0.68
Z96048-6|CAE17841.1| 327|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z92817-6|CAB60324.1| 384|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z83111-7|CAB05534.2| 384|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z81463-1|CAB03850.1| 342|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z81132-15|CAE17969.1| 327|Caenorhabditis elegans Hypothetical p... 31 0.90
Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical pr... 31 0.90
U97008-4|AAB52312.1| 430|Caenorhabditis elegans Hypothetical pr... 31 0.90
U46670-1|AAP46277.1| 445|Caenorhabditis elegans Nuclear hormone... 31 0.90
U41559-10|AAC24264.2| 371|Caenorhabditis elegans Hypothetical p... 31 0.90
AY204196-1|AAO39199.1| 412|Caenorhabditis elegans nuclear recep... 31 0.90
AY204166-1|AAO39170.1| 436|Caenorhabditis elegans nuclear recep... 31 0.90
AY204165-1|AAO39169.1| 445|Caenorhabditis elegans nuclear recep... 31 0.90
AC006777-1|ABB51174.1| 424|Caenorhabditis elegans Nuclear hormo... 31 0.90
Z81477-3|CAB03929.2| 316|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81116-12|CAB03309.1| 414|Caenorhabditis elegans Hypothetical p... 30 1.2
Z68119-2|CAA92192.1| 457|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical pr... 30 1.2
U97009-5|AAC69036.2| 505|Caenorhabditis elegans Nuclear hormone... 30 1.2
U61950-7|AAL02467.1| 395|Caenorhabditis elegans Nuclear hormone... 30 1.2
U61950-6|AAC24291.1| 528|Caenorhabditis elegans Nuclear hormone... 30 1.2
U61950-5|AAL02466.1| 576|Caenorhabditis elegans Nuclear hormone... 30 1.2
U53154-3|AAC25852.1| 346|Caenorhabditis elegans Hypothetical pr... 30 1.2
U50313-4|AAA92328.1| 417|Caenorhabditis elegans Hypothetical pr... 30 1.2
U50308-8|AAG24032.1| 562|Caenorhabditis elegans Hypothetical pr... 30 1.2
U16708-1|AAC46497.1| 457|Caenorhabditis elegans odr-7 protein. 30 1.2
AF273791-1|AAG15139.1| 525|Caenorhabditis elegans nuclear recep... 30 1.2
AF273790-1|AAG15138.1| 534|Caenorhabditis elegans nuclear recep... 30 1.2
AF273787-1|AAG15135.1| 527|Caenorhabditis elegans nuclear recep... 30 1.2
AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2 pro... 30 1.2
AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1 pro... 30 1.2
AF083226-1|AAD03684.1| 560|Caenorhabditis elegans nuclear recep... 30 1.2
AF036702-12|AAP31437.1| 559|Caenorhabditis elegans Nuclear horm... 30 1.2
AF036702-11|AAP31436.1| 560|Caenorhabditis elegans Nuclear horm... 30 1.2
AF024495-1|AAB70338.3| 399|Caenorhabditis elegans Nuclear hormo... 30 1.2
AF022983-3|AAB69942.2| 399|Caenorhabditis elegans Nuclear hormo... 30 1.2
AC006674-1|AAK68390.1| 388|Caenorhabditis elegans Nuclear hormo... 30 1.2
Z93389-2|CAB07671.2| 355|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81116-6|CAB03299.1| 416|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z68218-3|CAA92473.1| 325|Caenorhabditis elegans Hypothetical pr... 30 1.6
U61947-14|ABA29341.1| 413|Caenorhabditis elegans Nuclear hormon... 30 1.6
U61947-13|AAB03131.3| 429|Caenorhabditis elegans Nuclear hormon... 30 1.6
AY305845-1|AAR11989.1| 412|Caenorhabditis elegans nuclear recep... 30 1.6
AY204189-1|AAO39193.1| 429|Caenorhabditis elegans nuclear recep... 30 1.6
AL132948-35|CAC51060.2| 887|Caenorhabditis elegans Hypothetical... 30 1.6
AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical ... 30 1.6
AL021479-5|CAA16320.2| 420|Caenorhabditis elegans Hypothetical ... 30 1.6
AF332212-1|AAK17983.1| 231|Caenorhabditis elegans nuclear recep... 30 1.6
AF024494-13|AAB70328.1| 398|Caenorhabditis elegans Nuclear horm... 30 1.6
AF016685-3|AAG24145.2| 422|Caenorhabditis elegans Hypothetical ... 30 1.6
AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormo... 30 1.6
AC006675-7|AAK84555.2| 409|Caenorhabditis elegans Hypothetical ... 30 1.6
AC006675-6|AAK84556.2| 433|Caenorhabditis elegans Nuclear hormo... 30 1.6
AC006675-5|AAK84557.2| 412|Caenorhabditis elegans Nuclear hormo... 30 1.6
Z81116-5|CAB03298.1| 414|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z72504-3|CAA96605.1| 449|Caenorhabditis elegans Hypothetical pr... 29 2.1
U53154-6|AAC25855.3| 357|Caenorhabditis elegans Nuclear hormone... 29 2.1
U53154-5|AAC25853.1| 347|Caenorhabditis elegans Hypothetical pr... 29 2.1
U46670-3|AAP46279.1| 312|Caenorhabditis elegans Nuclear hormone... 29 2.1
U46670-2|AAC48174.4| 440|Caenorhabditis elegans Nuclear hormone... 29 2.1
U40940-3|AAN39667.1| 455|Caenorhabditis elegans Nuclear hormone... 29 2.1
U40940-2|AAM69090.1| 434|Caenorhabditis elegans Nuclear hormone... 29 2.1
U40940-1|AAM69089.1| 439|Caenorhabditis elegans Nuclear hormone... 29 2.1
AY305846-1|AAR11990.1| 404|Caenorhabditis elegans nuclear recep... 29 2.1
AY204192-1|AAO39196.1| 357|Caenorhabditis elegans nuclear recep... 29 2.1
AY204191-1|AAO39195.1| 357|Caenorhabditis elegans nuclear recep... 29 2.1
AY204188-1|AAO39192.1| 364|Caenorhabditis elegans nuclear recep... 29 2.1
AY204187-1|AAO39191.1| 156|Caenorhabditis elegans nuclear recep... 29 2.1
AY204186-1|AAO39190.1| 421|Caenorhabditis elegans nuclear recep... 29 2.1
AY204174-1|AAO39178.1| 344|Caenorhabditis elegans nuclear recep... 29 2.1
AY204173-1|AAO39177.1| 369|Caenorhabditis elegans nuclear recep... 29 2.1
AY204171-1|AAO39175.1| 424|Caenorhabditis elegans nuclear recep... 29 2.1
AY204164-1|AAO39168.1| 440|Caenorhabditis elegans nuclear recep... 29 2.1
AY204163-1|AAO39167.1| 440|Caenorhabditis elegans nuclear recep... 29 2.1
AF273807-1|AAG15156.1| 416|Caenorhabditis elegans nuclear recep... 29 2.1
AF273802-1|AAG15151.1| 353|Caenorhabditis elegans nuclear recep... 29 2.1
AF273784-1|AAG15133.1| 459|Caenorhabditis elegans nuclear recep... 29 2.1
AF273782-1|AAG15131.1| 439|Caenorhabditis elegans nuclear recep... 29 2.1
AF100669-6|AAM97937.1| 242|Caenorhabditis elegans Nuclear hormo... 29 2.1
AF100669-5|AAU05545.1| 364|Caenorhabditis elegans Nuclear hormo... 29 2.1
AF100669-4|AAM97936.1| 395|Caenorhabditis elegans Nuclear hormo... 29 2.1
AF067942-6|AAG45579.1| 345|Caenorhabditis elegans Hypothetical ... 29 2.1
AF043694-2|AAT27251.1| 387|Caenorhabditis elegans Nuclear hormo... 29 2.1
AF043694-1|AAC24283.1| 412|Caenorhabditis elegans Nuclear hormo... 29 2.1
AF022984-3|AAB69951.1| 343|Caenorhabditis elegans Hypothetical ... 29 2.1
AF022978-1|AAG24179.2| 424|Caenorhabditis elegans Nuclear hormo... 29 2.1
AF016675-1|AAF02172.2| 416|Caenorhabditis elegans Nuclear hormo... 29 2.1
AF016438-11|AAK84530.2| 404|Caenorhabditis elegans Nuclear horm... 29 2.1
AF016438-9|AAB65891.2| 394|Caenorhabditis elegans Nuclear hormo... 29 2.1
Z83128-3|CAB05637.1| 415|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z83128-2|CAB05636.1| 412|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81109-2|CAB03244.1| 408|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical p... 29 2.7
Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical p... 29 2.7
Z71258-11|CAJ30219.1| 361|Caenorhabditis elegans Hypothetical p... 29 2.7
Z50006-4|CAA90297.2| 316|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z46937-3|CAA87058.2| 457|Caenorhabditis elegans Hypothetical pr... 29 2.7
U41104-2|AAK18974.3| 304|Caenorhabditis elegans Nuclear hormone... 29 2.7
U41104-1|AAR30202.1| 318|Caenorhabditis elegans Nuclear hormone... 29 2.7
AY305839-1|AAR11984.1| 274|Caenorhabditis elegans nuclear recep... 29 2.7
AY305830-1|AAR11975.1| 418|Caenorhabditis elegans nuclear recep... 29 2.7
AY204203-1|AAO39204.1| 391|Caenorhabditis elegans nuclear recep... 29 2.7
AY204195-1|AAO39198.1| 364|Caenorhabditis elegans nuclear recep... 29 2.7
AF273811-1|AAG15160.1| 415|Caenorhabditis elegans nuclear recep... 29 2.7
AF273809-1|AAG15158.1| 418|Caenorhabditis elegans nuclear recep... 29 2.7
AF273771-1|AAG15120.1| 454|Caenorhabditis elegans nuclear recep... 29 2.7
AF083232-1|AAD03690.1| 392|Caenorhabditis elegans nuclear recep... 29 2.7
AF016675-6|AAF02171.2| 391|Caenorhabditis elegans Nuclear hormo... 29 2.7
AF016438-10|AAK84533.2| 394|Caenorhabditis elegans Nuclear horm... 29 2.7
AF016438-7|AAQ62454.1| 451|Caenorhabditis elegans Nuclear hormo... 29 2.7
Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81537-1|CAB04372.1| 326|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81496-11|CAB04069.2| 448|Caenorhabditis elegans Hypothetical p... 29 3.6
Z47356-8|CAD27185.1| 477|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z47075-8|CAA87381.2| 477|Caenorhabditis elegans Hypothetical pr... 29 3.6
U53154-7|AAC25857.1| 356|Caenorhabditis elegans Nuclear hormone... 29 3.6
AY204204-1|AAO39205.1| 448|Caenorhabditis elegans nuclear recep... 29 3.6
AF273783-1|AAG15132.1| 358|Caenorhabditis elegans nuclear recep... 29 3.6
AF068713-4|AAC17795.2| 398|Caenorhabditis elegans Hypothetical ... 29 3.6
AF016675-7|AAB66135.1| 387|Caenorhabditis elegans Hypothetical ... 29 3.6
AF016436-2|AAC25898.1| 406|Caenorhabditis elegans Hypothetical ... 29 3.6
AC006809-1|AAK71409.1| 391|Caenorhabditis elegans Hypothetical ... 29 3.6
Z92825-6|CAB07314.2| 435|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z70782-10|CAN86639.1| 456|Caenorhabditis elegans Hypothetical p... 28 4.8
Z70782-9|CAA94840.1| 453|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z50006-6|CAA90298.1| 334|Caenorhabditis elegans Hypothetical pr... 28 4.8
U55376-3|AAA98005.3| 525|Caenorhabditis elegans Nuclear hormone... 28 4.8
AY204175-1|AAO39179.1| 238|Caenorhabditis elegans nuclear recep... 28 4.8
AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical ... 28 4.8
AL110484-18|CAB54409.1| 357|Caenorhabditis elegans Hypothetical... 28 4.8
AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical ... 28 4.8
AL021470-2|CAE17952.1| 398|Caenorhabditis elegans Hypothetical ... 28 4.8
AL021470-1|CAA16292.1| 401|Caenorhabditis elegans Hypothetical ... 28 4.8
AF332207-1|AAK17978.1| 378|Caenorhabditis elegans nuclear recep... 28 4.8
AF273832-1|AAG15180.1| 408|Caenorhabditis elegans nuclear recep... 28 4.8
AF273806-1|AAG15155.1| 395|Caenorhabditis elegans nuclear recep... 28 4.8
AF022984-9|AAB69950.2| 393|Caenorhabditis elegans Nuclear hormo... 28 4.8
AF022976-14|AAC69077.1| 393|Caenorhabditis elegans Nuclear horm... 28 4.8
AF022976-7|AAC69086.1| 441|Caenorhabditis elegans Hypothetical ... 28 4.8
AF016445-12|AAC69062.1| 374|Caenorhabditis elegans Nuclear horm... 28 4.8
Z75955-11|CAB00125.1| 412|Caenorhabditis elegans Hypothetical p... 28 6.3
Z75955-10|CAB00124.2| 410|Caenorhabditis elegans Hypothetical p... 28 6.3
U53154-1|AAC25854.1| 382|Caenorhabditis elegans Hypothetical pr... 28 6.3
U41104-3|AAK18975.1| 378|Caenorhabditis elegans Hypothetical pr... 28 6.3
AY305842-1|AAR11987.1| 120|Caenorhabditis elegans nuclear recep... 28 6.3
AF083228-1|AAD03686.1| 415|Caenorhabditis elegans nuclear recep... 28 6.3
AF016654-8|AAB66025.2| 331|Caenorhabditis elegans Hypothetical ... 28 6.3
AF016438-12|AAK84532.1| 407|Caenorhabditis elegans Nuclear horm... 28 6.3
AF016438-8|AAB65892.3| 120|Caenorhabditis elegans Nuclear hormo... 28 6.3
AC006810-4|AAT68890.1| 425|Caenorhabditis elegans Nuclear hormo... 28 6.3
AC006810-3|AAF59634.2| 414|Caenorhabditis elegans Nuclear hormo... 28 6.3
Z82085-5|CAB04989.1| 342|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81529-10|CAB04290.1| 338|Caenorhabditis elegans Hypothetical p... 27 8.4
Z50006-5|CAA90300.1| 301|Caenorhabditis elegans Hypothetical pr... 27 8.4
U23449-3|AAC24301.1| 579|Caenorhabditis elegans Nuclear hormone... 27 8.4
DQ645956-1|ABG36764.1| 624|Caenorhabditis elegans molting prote... 27 8.4
AY204206-1|AAO39207.1| 477|Caenorhabditis elegans nuclear recep... 27 8.4
AY204205-1|AAO39206.1| 141|Caenorhabditis elegans nuclear recep... 27 8.4
AY204193-1|AAO39197.1| 338|Caenorhabditis elegans nuclear recep... 27 8.4
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 27 8.4
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 27 8.4
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 27 8.4
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 27 8.4
AF273773-1|AAG15122.1| 555|Caenorhabditis elegans nuclear recep... 27 8.4
AF273772-1|AAG15121.1| 443|Caenorhabditis elegans nuclear recep... 27 8.4
AF106581-6|ABC48242.1| 386|Caenorhabditis elegans Hypothetical ... 27 8.4
AF078157-7|AAG24077.2| 285|Caenorhabditis elegans Hypothetical ... 27 8.4
AF078157-6|AAQ62458.1| 406|Caenorhabditis elegans Hypothetical ... 27 8.4
AF039051-2|AAB94262.1| 413|Caenorhabditis elegans Nuclear hormo... 27 8.4
AF039048-15|AAK68332.2| 477|Caenorhabditis elegans Nuclear horm... 27 8.4
AF039048-14|AAM29674.1| 435|Caenorhabditis elegans Nuclear horm... 27 8.4
AF039042-9|AAC48245.1| 431|Caenorhabditis elegans Hypothetical ... 27 8.4
AF022978-4|AAG24178.1| 383|Caenorhabditis elegans Hypothetical ... 27 8.4
AF016676-9|AAG24107.1| 394|Caenorhabditis elegans Hypothetical ... 27 8.4
AF016676-8|AAG24105.1| 502|Caenorhabditis elegans Hypothetical ... 27 8.4
AF016675-5|AAB66134.1| 476|Caenorhabditis elegans Hypothetical ... 27 8.4
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 27 8.4
>Z82071-5|CAB04919.2| 514|Caenorhabditis elegans Hypothetical
protein W05B5.3a protein.
Length = 514
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 6/98 (6%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQ CRLKKC+AVGMSRDAVRFGRVPKREKAR+ MQ+++ +Q A + ++
Sbjct: 164 NRCQCCRLKKCLAVGMSRDAVRFGRVPKREKARMFEEMQKTNVQSQRDQ-IAIQYENLTE 222
Query: 525 LLARV------VRAHLDTCEFHA*SRRFHASQSFVTVP 620
++ ++ ++A L+ C + R + +F+ +P
Sbjct: 223 VMHKINQAFGTLQATLEKCTGPIYTDRCPITSNFIVIP 260
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQKI YR CT+ + C ILR NR
Sbjct: 134 KGFFRRSIQQKITYRACTRAEDCLILRNNR 163
>AY204180-1|AAO39184.1| 514|Caenorhabditis elegans nuclear receptor
NHR-85 protein.
Length = 514
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 6/98 (6%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQ CRLKKC+AVGMSRDAVRFGRVPKREKAR+ MQ+++ +Q A + ++
Sbjct: 164 NRCQCCRLKKCLAVGMSRDAVRFGRVPKREKARMFEEMQKTNVQSQRDQ-IAIQYENLTE 222
Query: 525 LLARV------VRAHLDTCEFHA*SRRFHASQSFVTVP 620
++ ++ ++A L+ C + R + +F+ +P
Sbjct: 223 VMHKINQAFGTLQATLEKCTGPIYTDRCPITSNFIVIP 260
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQKI YR CT+ + C ILR NR
Sbjct: 134 KGFFRRSIQQKITYRACTRAEDCLILRNNR 163
>AL110478-13|CAC14397.1| 514|Caenorhabditis elegans Hypothetical
protein W05B5.3a protein.
Length = 514
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 6/98 (6%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQ CRLKKC+AVGMSRDAVRFGRVPKREKAR+ MQ+++ +Q A + ++
Sbjct: 164 NRCQCCRLKKCLAVGMSRDAVRFGRVPKREKARMFEEMQKTNVQSQRDQ-IAIQYENLTE 222
Query: 525 LLARV------VRAHLDTCEFHA*SRRFHASQSFVTVP 620
++ ++ ++A L+ C + R + +F+ +P
Sbjct: 223 VMHKINQAFGTLQATLEKCTGPIYTDRCPITSNFIVIP 260
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRSIQQKI YR CT+ + C ILR NR
Sbjct: 134 KGFFRRSIQQKITYRACTRAEDCLILRNNR 163
>Z71258-12|CAJ30220.1| 555|Caenorhabditis elegans Hypothetical
protein C01H6.5f protein.
Length = 555
Score = 63.3 bits (147), Expect = 1e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + V + NRCQYCRLKKCI +GMSRDAV+FGR+ K+++ ++ + R H+
Sbjct: 166 RQKNCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGRMSKKQREKV----EDEVQVRMHK 221
Query: 489 QAAA 500
+ AA
Sbjct: 222 ELAA 225
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRS + Y+ C + + C + R+NR
Sbjct: 149 KGFFRRSQSSIVNYQ-CPRQKNCVVDRVNR 177
>Z71258-10|CAJ30218.1| 439|Caenorhabditis elegans Hypothetical
protein C01H6.5d protein.
Length = 439
Score = 63.3 bits (147), Expect = 1e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHE 488
R + V + NRCQYCRLKKCI +GMSRDAV+FGR+ K+++ ++ + R H+
Sbjct: 50 RQKNCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGRMSKKQREKV----EDEVQVRMHK 105
Query: 489 QAAA 500
+ AA
Sbjct: 106 ELAA 109
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRS + Y+ C + + C + R+NR
Sbjct: 33 KGFFRRSQSSIVNYQ-CPRQKNCVVDRVNR 61
>Z71258-9|CAI46548.1| 437|Caenorhabditis elegans Hypothetical
protein C01H6.5c protein.
Length = 437
Score = 62.1 bits (144), Expect = 3e-10
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
R + V + NRCQYCRLKKCI +GMSRDAV+FGR+ K+++ ++
Sbjct: 50 RQKNCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGRMSKKQREKV 95
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRS + Y+ C + + C + R+NR
Sbjct: 33 KGFFRRSQSSIVNYQ-CPRQKNCVVDRVNR 61
>Z71258-8|CAD30427.1| 553|Caenorhabditis elegans Hypothetical
protein C01H6.5b protein.
Length = 553
Score = 62.1 bits (144), Expect = 3e-10
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
R + V + NRCQYCRLKKCI +GMSRDAV+FGR+ K+++ ++
Sbjct: 166 RQKNCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGRMSKKQREKV 211
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRS + Y+ C + + C + R+NR
Sbjct: 149 KGFFRRSQSSIVNYQ-CPRQKNCVVDRVNR 177
>Z71258-7|CAA95782.2| 588|Caenorhabditis elegans Hypothetical
protein C01H6.5a protein.
Length = 588
Score = 62.1 bits (144), Expect = 3e-10
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
R + V + NRCQYCRLKKCI +GMSRDAV+FGR+ K+++ ++
Sbjct: 201 RQKNCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGRMSKKQREKV 246
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRS + Y+ C + + C + R+NR
Sbjct: 184 KGFFRRSQSSIVNYQ-CPRQKNCVVDRVNR 212
>U51136-1|AAA96057.1| 553|Caenorhabditis elegans CHR3 protein.
Length = 553
Score = 62.1 bits (144), Expect = 3e-10
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
R + V + NRCQYCRLKKCI +GMSRDAV+FGR+ K+++ ++
Sbjct: 166 RQKNCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGRMSKKQREKV 211
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRS + Y+ C + + C + R+NR
Sbjct: 149 KGFFRRSQSSIVNYQ-CPRQKNCVVDRVNR 177
>U13075-1|AAA96983.1| 553|Caenorhabditis elegans steroid hormone
receptor familymember CHR3 protein.
Length = 553
Score = 62.1 bits (144), Expect = 3e-10
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
R + V + NRCQYCRLKKCI +GMSRDAV+FGR+ K+++ ++
Sbjct: 166 RQKNCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGRMSKKQREKV 211
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRS + Y+ C + + C + R+NR
Sbjct: 149 KGFFRRSQSSIVNYQ-CPRQKNCVVDRVNR 177
>AF332203-1|AAK17974.1| 588|Caenorhabditis elegans nuclear receptor
NHR-23 protein.
Length = 588
Score = 62.1 bits (144), Expect = 3e-10
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
R + V + NRCQYCRLKKCI +GMSRDAV+FGR+ K+++ ++
Sbjct: 201 RQKNCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGRMSKKQREKV 246
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRS + Y+ C + + C + R+NR
Sbjct: 184 KGFFRRSQSSIVNYQ-CPRQKNCVVDRVNR 212
>AF332202-1|AAK17973.1| 573|Caenorhabditis elegans nuclear receptor
NHR-23 protein.
Length = 573
Score = 62.1 bits (144), Expect = 3e-10
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 309 RTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
R + V + NRCQYCRLKKCI +GMSRDAV+FGR+ K+++ ++
Sbjct: 186 RQKNCVVDRVNRNRCQYCRLKKCIELGMSRDAVKFGRMSKKQREKV 231
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFFRRS + Y+ C + + C + R+NR
Sbjct: 169 KGFFRRSQSSIVNYQ-CPRQKNCVVDRVNR 197
>Z82071-3|CAH04734.1| 336|Caenorhabditis elegans Hypothetical
protein W05B5.3b protein.
Length = 336
Score = 48.4 bits (110), Expect = 4e-06
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Frame = +3
Query: 390 MSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLARV------VRAH 551
MSRDAVRFGRVPKREKAR+ MQ+++ +Q A + ++ ++ ++ ++A
Sbjct: 1 MSRDAVRFGRVPKREKARMFEEMQKTNVQSQRDQ-IAIQYENLTEVMHKINQAFGTLQAT 59
Query: 552 LDTCEFHA*SRRFHASQSFVTVP 620
L+ C + R + +F+ +P
Sbjct: 60 LEKCTGPIYTDRCPITSNFIVIP 82
>AY204181-1|AAO39185.1| 336|Caenorhabditis elegans nuclear receptor
NHR-85 protein.
Length = 336
Score = 48.4 bits (110), Expect = 4e-06
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Frame = +3
Query: 390 MSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLARV------VRAH 551
MSRDAVRFGRVPKREKAR+ MQ+++ +Q A + ++ ++ ++ ++A
Sbjct: 1 MSRDAVRFGRVPKREKARMFEEMQKTNVQSQRDQ-IAIQYENLTEVMHKINQAFGTLQAT 59
Query: 552 LDTCEFHA*SRRFHASQSFVTVP 620
L+ C + R + +F+ +P
Sbjct: 60 LEKCTGPIYTDRCPITSNFIVIP 82
>U41536-4|AAK39238.2| 419|Caenorhabditis elegans Defective
fasciculation of axonsprotein 1 protein.
Length = 419
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAA 500
N+CQ CRLKKC+ GM++DAV+ R P R A I A+ + E A A
Sbjct: 153 NQCQACRLKKCLNKGMNKDAVQNERQP-RNTATIRPALDMDPQNFFREYAGA 203
>AF176087-1|AAD55066.1| 419|Caenorhabditis elegans nuclear hormone
receptor FAX-1 protein.
Length = 419
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAA 500
N+CQ CRLKKC+ GM++DAV+ R P R A I A+ + E A A
Sbjct: 153 NQCQACRLKKCLNKGMNKDAVQNERQP-RNTATIRPALDMDPQNFFREYAGA 203
>Z73103-7|CAA97428.1| 416|Caenorhabditis elegans Hypothetical
protein C08F8.8 protein.
Length = 416
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
N+C+ CRL+KC+ +GM++DAV+ R P+ R M SS
Sbjct: 76 NQCRACRLRKCLEIGMNKDAVQHERGPRNSSLRRQQMMFDHGSS 119
>Z50858-5|CAA90722.1| 534|Caenorhabditis elegans Hypothetical
protein F44A6.2 protein.
Length = 534
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
NRCQYCR KKC+ GMS+D+VR
Sbjct: 201 NRCQYCRFKKCLDSGMSKDSVR 222
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQ+KI YR C K Q C I R +R
Sbjct: 167 SCEGCKGFFRRSIQRKIDYR-CLKQQVCEIKRESR 200
>U13074-1|AAA96982.1| 534|Caenorhabditis elegans steroid hormone
receptor familymember CNR14 protein.
Length = 534
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
NRCQYCR KKC+ GMS+D+VR
Sbjct: 201 NRCQYCRFKKCLDSGMSKDSVR 222
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQ+KI YR C K Q C I R +R
Sbjct: 167 SCEGCKGFFRRSIQRKIDYR-CLKQQVCEIKRESR 200
>AY204176-1|AAO39180.1| 409|Caenorhabditis elegans nuclear receptor
NHR-67 protein.
Length = 409
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
N+C+ CRL+KC+ +GM++DAV+ R P+ R M SS
Sbjct: 69 NQCRACRLRKCLEIGMNKDAVQHERGPRNSSLRRQQMMFDHGSS 112
>AF273840-1|AAG15187.1| 553|Caenorhabditis elegans sex-1 protein.
Length = 553
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
NRCQYCR KKC+ GMS+D+VR
Sbjct: 198 NRCQYCRFKKCLDSGMSKDSVR 219
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQ+KI YR C K Q C I R +R
Sbjct: 164 SCEGCKGFFRRSIQRKIDYR-CLKQQVCEIKRESR 197
>AF049869-1|AAC77795.1| 556|Caenorhabditis elegans SEX-1 protein.
Length = 556
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
NRCQYCR KKC+ GMS+D+VR
Sbjct: 201 NRCQYCRFKKCLDSGMSKDSVR 222
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQ+KI YR C K Q C I R +R
Sbjct: 167 SCEGCKGFFRRSIQRKIDYR-CLKQQVCEIKRESR 200
>AF273829-1|AAG15178.1| 372|Caenorhabditis elegans nuclear receptor
NHR-87 protein.
Length = 372
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 279 NRRYNT-GPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAA 455
NR++ G + V+S+G C+ CRL KC+AVGM ++ V+ GR ++ L +
Sbjct: 45 NRKFRCYGEPVNSCEVISTG--NALCKGCRLAKCLAVGMKKETVQQGRESYGKRELALVS 102
Query: 456 MQQSS 470
+Q+SS
Sbjct: 103 LQRSS 107
>AC024776-16|AAL32242.1| 363|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 87 protein.
Length = 363
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 279 NRRYNT-GPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAA 455
NR++ G + V+S+G C+ CRL KC+AVGM ++ V+ GR ++ L +
Sbjct: 36 NRKFRCYGEPVNSCEVISTG--NALCKGCRLAKCLAVGMKKETVQQGRESYGKRELALVS 93
Query: 456 MQQSS 470
+Q+SS
Sbjct: 94 LQRSS 98
>U37424-1|AAA80355.1| 359|Caenorhabditis elegans NHR-2 protein.
Length = 359
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAA 500
RCQ CR KC+AVGM+RD VR + ++ +A+ +S+ E AA
Sbjct: 163 RCQACRFAKCLAVGMNRDNVRVNKETDKDVKPSVASPNFEMTSQVKELTAA 213
Score = 31.1 bits (67), Expect = 0.68
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCS 325
SC+ +GFFRRS+ + I Y CTK + C+
Sbjct: 121 SCEGCKGFFRRSVHKNIAY-VCTKGENCT 148
>AF332201-1|AAK17972.1| 474|Caenorhabditis elegans nuclear receptor
NHR-2 protein.
Length = 474
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAA 500
RCQ CR KC+AVGM+RD VR + ++ +A+ +S+ E AA
Sbjct: 278 RCQACRFAKCLAVGMNRDNVRVNKETDKDVKPSVASPNFEMTSQVKELTAA 328
Score = 31.1 bits (67), Expect = 0.68
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCS 325
SC+ +GFFRRS+ + I Y CTK + C+
Sbjct: 236 SCEGCKGFFRRSVHKNIAY-VCTKGENCT 263
>AF332200-1|AAK17971.1| 453|Caenorhabditis elegans nuclear receptor
NHR-2 protein.
Length = 453
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAA 500
RCQ CR KC+AVGM+RD VR + ++ +A+ +S+ E AA
Sbjct: 274 RCQACRFAKCLAVGMNRDNVRVNKETDKDVKPSVASPNFEMTSQVKELTAA 324
Score = 31.1 bits (67), Expect = 0.68
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCS 325
SC+ +GFFRRS+ + I Y CTK + C+
Sbjct: 232 SCEGCKGFFRRSVHKNIAY-VCTKGENCT 259
>AF000195-4|AAC24271.2| 359|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 2 protein.
Length = 359
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAA 500
RCQ CR KC+AVGM+RD VR + ++ +A+ +S+ E AA
Sbjct: 163 RCQACRFAKCLAVGMNRDNVRVNKETDKDVKPSVASPNFEMTSQVKELTAA 213
Score = 31.1 bits (67), Expect = 0.68
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCS 325
SC+ +GFFRRS+ + I Y CTK + C+
Sbjct: 121 SCEGCKGFFRRSVHKNIAY-VCTKGENCT 148
>AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein.
Length = 459
Score = 41.1 bits (92), Expect = 6e-04
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRCQYCRL+KC+++GM ++V+ R P
Sbjct: 78 NRCQYCRLRKCLSMGMRSESVQAERRP 104
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFF+RSI+++I Y C + C + + +R
Sbjct: 44 SCEGCKGFFKRSIRKRIGY-VCRSQKDCPVTKFHR 77
>AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein.
Length = 583
Score = 41.1 bits (92), Expect = 6e-04
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRCQYCRL+KC+++GM ++V+ R P
Sbjct: 202 NRCQYCRLRKCLSMGMRSESVQAERRP 228
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFF+RSI+++I Y C + C + + +R
Sbjct: 168 SCEGCKGFFKRSIRKRIGY-VCRSQKDCPVTKFHR 201
>Z83235-7|CAD57703.1| 486|Caenorhabditis elegans Hypothetical
protein K10C3.6d protein.
Length = 486
Score = 40.7 bits (91), Expect = 8e-04
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C+YCR +KC+ VGM R+A++F R P
Sbjct: 72 CRYCRFQKCVQVGMKREAIQFERDP 96
>Z83235-6|CAD57702.1| 501|Caenorhabditis elegans Hypothetical
protein K10C3.6c protein.
Length = 501
Score = 40.7 bits (91), Expect = 8e-04
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C+YCR +KC+ VGM R+A++F R P
Sbjct: 87 CRYCRFQKCVQVGMKREAIQFERDP 111
>Z83235-5|CAD21653.1| 476|Caenorhabditis elegans Hypothetical
protein K10C3.6b protein.
Length = 476
Score = 40.7 bits (91), Expect = 8e-04
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C+YCR +KC+ VGM R+A++F R P
Sbjct: 63 CRYCRFQKCVQVGMKREAIQFERDP 87
>Z83235-4|CAB05772.1| 477|Caenorhabditis elegans Hypothetical
protein K10C3.6a protein.
Length = 477
Score = 40.7 bits (91), Expect = 8e-04
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C+YCR +KC+ VGM R+A++F R P
Sbjct: 63 CRYCRFQKCVQVGMKREAIQFERDP 87
>Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical
protein F54D1.4 protein.
Length = 536
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N C+YCR +KC+ VGM+ D VR R ++ +L+ + S S ++ A
Sbjct: 60 NACRYCRFRKCLLVGMNPDYVRPDREKSKKGKTVLSKKKSVSRSLSYRLA 109
>AF332206-1|AAK17977.1| 381|Caenorhabditis elegans nuclear receptor
NHR-49 protein.
Length = 381
Score = 40.7 bits (91), Expect = 8e-04
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C+YCR +KC+ VGM R+A++F R P
Sbjct: 57 CRYCRFQKCVQVGMKREAIQFERDP 81
>AF273795-1|AAG15143.1| 475|Caenorhabditis elegans nuclear receptor
NHR-49 protein.
Length = 475
Score = 40.7 bits (91), Expect = 8e-04
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C+YCR +KC+ VGM R+A++F R P
Sbjct: 62 CRYCRFQKCVQVGMKREAIQFERDP 86
>AF273793-1|AAG15141.1| 474|Caenorhabditis elegans nuclear receptor
NHR-49 protein.
Length = 474
Score = 40.7 bits (91), Expect = 8e-04
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C+YCR +KC+ VGM R+A++F R P
Sbjct: 60 CRYCRFQKCVQVGMKREAIQFERDP 84
>AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear receptor
NHR-7 protein.
Length = 536
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
N C+YCR +KC+ VGM+ D VR R ++ +L+ + S S ++ A
Sbjct: 60 NACRYCRFRKCLLVGMNPDYVRPDREKSKKGKTVLSKKKSVSRSLSYRLA 109
>Z36237-1|CAA85271.2| 619|Caenorhabditis elegans Hypothetical
protein C48D5.1 protein.
Length = 619
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431
+RCQYCR +KC+ VGM ++ VR G + R
Sbjct: 318 SRCQYCRYQKCLEVGMVKEIVRHGSLSGR 346
>U13076-1|AAA96984.1| 463|Caenorhabditis elegans steroid hormone
receptor familymember CNR8 protein.
Length = 463
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431
+RCQYCR +KC+ VGM ++ VR G + R
Sbjct: 162 SRCQYCRYQKCLEVGMVKEIVRHGSLSGR 190
>EF601077-1|ABQ96199.1| 357|Caenorhabditis elegans UNC-55b isoform
protein.
Length = 357
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
N+CQYCRL KCI +GM ++ R GR+P
Sbjct: 71 NQCQYCRLTKCIRMGMRKEVQR-GRLP 96
>AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein.
Length = 474
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRCQ CR +KCI+ GM +AVR R+P
Sbjct: 150 NRCQSCRFRKCISKGMLTEAVREDRMP 176
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFF+RS+Q K Y C+++ C I + NR
Sbjct: 121 KGFFKRSVQNKKVYH-CSQDNCCEIDKQNR 149
>AY204167-1|AAO39171.1| 619|Caenorhabditis elegans nuclear receptor
NHR-6 protein.
Length = 619
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431
+RCQYCR +KC+ VGM ++ VR G + R
Sbjct: 318 SRCQYCRYQKCLEVGMVKEIVRHGSLSGR 346
>AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical
protein Y15E3A.1a protein.
Length = 474
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRCQ CR +KCI+ GM +AVR R+P
Sbjct: 150 NRCQSCRFRKCISKGMLTEAVREDRMP 176
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFF+RS+Q K Y C+++ C I + NR
Sbjct: 121 KGFFKRSVQNKKVYH-CSQDNCCEIDKQNR 149
>AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 476
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRCQ CR +KCI+ GM +AVR R+P
Sbjct: 152 NRCQSCRFRKCISKGMLTEAVREDRMP 178
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFF+RS+Q K Y C+++ C I + NR
Sbjct: 123 KGFFKRSVQNKKVYH-CSQDNCCEIDKQNR 151
>AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRCQ CR +KCI+ GM +AVR R+P
Sbjct: 151 NRCQSCRFRKCISKGMLTEAVREDRMP 177
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFF+RS+Q K Y C+++ C I + NR
Sbjct: 122 KGFFKRSVQNKKVYH-CSQDNCCEIDKQNR 150
>AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVP 425
NRCQ CR +KCI+ GM +AVR R+P
Sbjct: 151 NRCQSCRFRKCISKGMLTEAVREDRMP 177
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
+GFF+RS+Q K Y C+++ C I + NR
Sbjct: 122 KGFFKRSVQNKKVYH-CSQDNCCEIDKQNR 150
>AF273770-1|AAG15119.1| 469|Caenorhabditis elegans nuclear receptor
NHR-6 protein.
Length = 469
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431
+RCQYCR +KC+ VGM ++ VR G + R
Sbjct: 168 SRCQYCRYQKCLEVGMVKEIVRHGSLSGR 196
>AF083224-1|AAD03682.1| 619|Caenorhabditis elegans nuclear receptor
NHR-6 protein.
Length = 619
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKR 431
+RCQYCR +KC+ VGM ++ VR G + R
Sbjct: 318 SRCQYCRYQKCLEVGMVKEIVRHGSLSGR 346
>Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical
protein C28D4.1 protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK 428
NRC+ CRLK+C+ VGM +AVR R K
Sbjct: 74 NRCRACRLKRCLHVGMDANAVRSERTRK 101
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSI 328
SC+ +GFFRRSI +K Y+ C+ N +C I
Sbjct: 40 SCNGCKGFFRRSIWEKRTYK-CSFNNECII 68
>AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPK 428
NRC+ CRLK+C+ VGM +AVR R K
Sbjct: 74 NRCRACRLKRCLHVGMDANAVRSERTRK 101
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSI 328
SC+ +GFFRRSI +K Y+ C+ N +C I
Sbjct: 40 SCNGCKGFFRRSIWEKRTYK-CSFNNECII 68
>AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 618
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 318 SVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
+VV G G +C+ CR +KCI+ GM +++V+ R
Sbjct: 199 TVVKDGSAGQKCRACRFRKCISSGMDKNSVQHRR 232
>AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 624
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 318 SVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
+VV G G +C+ CR +KCI+ GM +++V+ R
Sbjct: 203 TVVKDGSAGQKCRACRFRKCISSGMDKNSVQHRR 236
>AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 619
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 318 SVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
+VV G G +C+ CR +KCI+ GM +++V+ R
Sbjct: 198 TVVKDGSAGQKCRACRFRKCISSGMDKNSVQHRR 231
>AF047660-8|AAM54167.1| 526|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform b protein.
Length = 526
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 318 SVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
+VV G G +C+ CR +KCI+ GM +++V+ R
Sbjct: 105 TVVKDGSAGQKCRACRFRKCISSGMDKNSVQHRR 138
>AF047660-7|AAM54166.1| 577|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform a protein.
Length = 577
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 318 SVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
+VV G G +C+ CR +KCI+ GM +++V+ R
Sbjct: 156 TVVKDGSAGQKCRACRFRKCISSGMDKNSVQHRR 189
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 318 SVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
+VV G G +C+ CR +KCI+ GM +++V+ R
Sbjct: 238 TVVKDGSAGQKCRACRFRKCISSGMDKNSVQHRR 271
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 318 SVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
+VV G G +C+ CR +KCI+ GM +++V+ R
Sbjct: 312 TVVKDGSAGQKCRACRFRKCISSGMDKNSVQHRR 345
>AF022970-8|AAB69901.2| 231|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 118 protein.
Length = 231
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/93 (25%), Positives = 43/93 (46%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRC+ CRL+KC GM A+R R ++ + + + + + + A L
Sbjct: 67 NRCRACRLEKCFRAGMDASAIRNKRAKRKSQPESPCTEEIENRALSWQTEAIIAL----- 121
Query: 525 LLARVVRAHLDTCEFHA*SRRFHASQSFVTVPT 623
L+ + + H +F S +++SFVT+ T
Sbjct: 122 LMQKNGQTHNKLSQFSGASEFNFSTRSFVTLET 154
Score = 34.7 bits (76), Expect = 0.055
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +2
Query: 218 VERDSTKCSCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVPVLPTEKMHRRRNE 394
++R SC+ +GFFRRSI +K Y+ C+ + QCSI R EK R +
Sbjct: 25 IQRHYGTVSCNGCKGFFRRSIWEKRTYK-CSFHNQCSIEHKYRNRCRACRLEKCFRAGMD 83
Query: 395 QRCCAIRSCTQTRESAYPRSDAT 463
AIR+ R+S P S T
Sbjct: 84 --ASAIRNKRAKRKS-QPESPCT 103
>U64835-7|AAG24198.2| 427|Caenorhabditis elegans Hypothetical
protein T09D3.4 protein.
Length = 427
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR 419
N C+ CR KKCIAVGM+ D V++ R
Sbjct: 112 NVCRDCRYKKCIAVGMTTDNVQYNR 136
>U41542-10|AAX88836.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 35, isoform b protein.
Length = 486
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR--VPKREKARILAAMQQSSSSRAHEQAAAAELDDA-P 521
C+YCR KCI+ GM D V+ R + KREK + Q + R + + ++D
Sbjct: 73 CRYCRFMKCISSGMRDDQVQSERDVIGKREKKDNMKTYCQDPTPRTSPELTMSPVEDEYD 132
Query: 522 RLLARVVRAHL 554
+LL ++++ +
Sbjct: 133 QLLESLLKSEM 143
>U41542-9|AAK39150.3| 542|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 35, isoform a protein.
Length = 542
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR--VPKREKARILAAMQQSSSSRAHEQAAAAELDDA-P 521
C+YCR KCI+ GM D V+ R + KREK + Q + R + + ++D
Sbjct: 129 CRYCRFMKCISSGMRDDQVQSERDVIGKREKKDNMKTYCQDPTPRTSPELTMSPVEDEYD 188
Query: 522 RLLARVVRAHL 554
+LL ++++ +
Sbjct: 189 QLLESLLKSEM 199
>AY305836-1|AAR11981.1| 487|Caenorhabditis elegans nuclear receptor
NHR-35 protein.
Length = 487
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR--VPKREKARILAAMQQSSSSRAHEQAAAAELDDA-P 521
C+YCR KCI+ GM D V+ R + KREK + Q + R + + ++D
Sbjct: 74 CRYCRFMKCISSGMRDDQVQSERDVIGKREKKDNMKTYCQDPTPRTSPELTMSPVEDEYD 133
Query: 522 RLLARVVRAHL 554
+LL ++++ +
Sbjct: 134 QLLESLLKSEM 144
>AY204202-1|AAO39203.1| 339|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 339
Score = 37.1 bits (82), Expect = 0.010
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C+YCR +KC++VGM R+A++ R P
Sbjct: 67 CRYCRFEKCLSVGMDRNALQQNRDP 91
>AY204201-1|AAO39202.1| 409|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 409
Score = 37.1 bits (82), Expect = 0.010
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C+YCR +KC++VGM R+A++ R P
Sbjct: 58 CRYCRFEKCLSVGMDRNALQQNRDP 82
>AY204200-1|AAO39201.1| 304|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 304
Score = 37.1 bits (82), Expect = 0.010
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C+YCR +KC++VGM R+A++ R P
Sbjct: 67 CRYCRFEKCLSVGMDRNALQQNRDP 91
>AF408754-1|AAO27833.1| 418|Caenorhabditis elegans nuclear receptor
protein protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.010
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C+YCR +KC++VGM R+A++ R P
Sbjct: 67 CRYCRFEKCLSVGMDRNALQQNRDP 91
>AF273781-1|AAG15130.1| 508|Caenorhabditis elegans nuclear receptor
NHR-35 protein.
Length = 508
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR--VPKREKARILAAMQQSSSSRAHEQAAAAELDDA-P 521
C+YCR KCI+ GM D V+ R + KREK + Q + R + + ++D
Sbjct: 95 CRYCRFMKCISSGMRDDQVQSERDVIGKREKKDNMKTYCQDPTPRTSPELTMSPVEDEYD 154
Query: 522 RLLARVVRAHL 554
+LL ++++ +
Sbjct: 155 QLLESLLKSEM 165
>AC084155-11|AAQ91893.1| 304|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 114, isoform b protein.
Length = 304
Score = 37.1 bits (82), Expect = 0.010
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C+YCR +KC++VGM R+A++ R P
Sbjct: 67 CRYCRFEKCLSVGMDRNALQQNRDP 91
>AC084155-10|AAG23368.3| 418|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 114, isoform a protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.010
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C+YCR +KC++VGM R+A++ R P
Sbjct: 67 CRYCRFEKCLSVGMDRNALQQNRDP 91
>Z82259-10|CAD36480.1| 439|Caenorhabditis elegans Hypothetical
protein H27C11.1a protein.
Length = 439
Score = 36.3 bits (80), Expect = 0.018
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR-VPKREKAR 443
N C+YCR +C+ VGM +AV+ R + KR+K +
Sbjct: 86 NACRYCRFHRCLFVGMKIEAVKMDRKLTKRKKEK 119
>Z50004-1|CAA90291.1| 396|Caenorhabditis elegans Hypothetical
protein C02B4.2 protein.
Length = 396
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQS 467
C++CR KKCI GM R + R KR+K L ++S
Sbjct: 83 CRHCRYKKCIIAGMDRGELSMERRRKRKKLNGLEGSEES 121
>U41296-1|AAA93297.1| 579|Caenorhabditis elegans Steroid hormone
receptor-like proteinprotein.
Length = 579
Score = 36.3 bits (80), Expect = 0.018
Identities = 12/23 (52%), Positives = 20/23 (86%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR 419
C+YCRL+KC+AVGM +++++ R
Sbjct: 63 CRYCRLQKCLAVGMDKNSIQNDR 85
>AY204170-1|AAO39174.1| 579|Caenorhabditis elegans nuclear receptor
NHR-47 protein.
Length = 579
Score = 36.3 bits (80), Expect = 0.018
Identities = 12/23 (52%), Positives = 20/23 (86%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR 419
C+YCRL+KC+AVGM +++++ R
Sbjct: 63 CRYCRLQKCLAVGMDKNSIQNDR 85
>AL022473-2|CAA18549.2| 439|Caenorhabditis elegans Hypothetical
protein H27C11.1a protein.
Length = 439
Score = 36.3 bits (80), Expect = 0.018
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR-VPKREKAR 443
N C+YCR +C+ VGM +AV+ R + KR+K +
Sbjct: 86 NACRYCRFHRCLFVGMKIEAVKMDRKLTKRKKEK 119
>AL021472-1|CAA16299.2| 397|Caenorhabditis elegans Hypothetical
protein Y17D7B.1 protein.
Length = 397
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKA 440
NR+Y + S G C++CR KKCI +GM+ D VR + ++E A
Sbjct: 48 NRKYKCA---QKSGKCDVGAEKATCKFCRYKKCIDLGMTTDNVRAEDITEQEPA 98
>AF332211-1|AAK17982.1| 439|Caenorhabditis elegans nuclear receptor
NHR-97 protein.
Length = 439
Score = 36.3 bits (80), Expect = 0.018
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR-VPKREKAR 443
N C+YCR +C+ VGM +AV+ R + KR+K +
Sbjct: 86 NACRYCRFHRCLFVGMKIEAVKMDRKLTKRKKEK 119
>AF067936-1|AAC19212.2| 579|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 47 protein.
Length = 579
Score = 36.3 bits (80), Expect = 0.018
Identities = 12/23 (52%), Positives = 20/23 (86%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR 419
C+YCRL+KC+AVGM +++++ R
Sbjct: 63 CRYCRLQKCLAVGMDKNSIQNDR 85
>AF022969-1|AAB69894.3| 391|Caenorhabditis elegans Hypothetical
protein C29G2.5 protein.
Length = 391
Score = 36.3 bits (80), Expect = 0.018
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 306 RRTSSVVSSGLTGNRCQYCRLKKCI-AVGMSRDAVRFGRVPKREKARILAAMQQSSSSR 479
+R S +SS + C+ CR ++CI GMSRD V+ R KR +LA R
Sbjct: 51 KRDSDCISSPELRSICRACRYQRCIDTAGMSRDLVQQRRSEKRTPKYVLALRNGGEDER 109
>AC006675-9|AAK84553.1| 431|Caenorhabditis elegans Hypothetical
protein M02H5.3 protein.
Length = 431
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQ 461
C+ CRL++C +GM D +F R P ++K + AA++
Sbjct: 87 CKKCRLQRCFDIGMKIDNFQFERDPYKQKLEMQAALK 123
>Z82055-8|CAB04850.2| 463|Caenorhabditis elegans Hypothetical
protein T26H2.9 protein.
Length = 463
Score = 35.9 bits (79), Expect = 0.024
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443
C++CRLKKC GM RD V+ R K +K +
Sbjct: 61 CRHCRLKKCQKAGMMRDLVQAKREIKSDKGK 91
>Z75542-4|CAA99861.1| 424|Caenorhabditis elegans Hypothetical
protein F55D12.4 protein.
Length = 424
Score = 35.9 bits (79), Expect = 0.024
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+CQYCRL KCI +GM ++ R
Sbjct: 104 NQCQYCRLTKCIRMGMRKEGRR 125
>EF601082-1|ABQ96204.1| 370|Caenorhabditis elegans UNC-55a isoform
protein.
Length = 370
Score = 35.9 bits (79), Expect = 0.024
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N+CQYCRL KCI +GM ++ R
Sbjct: 71 NQCQYCRLTKCIRMGMRKEGRR 92
>AF332208-1|AAK17979.1| 435|Caenorhabditis elegans nuclear receptor
NHR-79 protein.
Length = 435
Score = 35.9 bits (79), Expect = 0.024
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKAR 443
C++CRLKKC GM RD V+ R K +K +
Sbjct: 33 CRHCRLKKCQKAGMMRDLVQAKREIKSDKGK 63
>AC084158-16|AAK68571.2| 347|Caenorhabditis elegans Hypothetical
protein Y69A2AR.26 protein.
Length = 347
Score = 35.9 bits (79), Expect = 0.024
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +3
Query: 339 TGNRCQYCRLKKCIAVGMSRDAVR----FG-RVPKREKARILAAMQQSSSSRAHEQAAAA 503
T N C+ CRL+KC+ VGM+ +A++ G R PK K R+ A S S +
Sbjct: 69 TRNTCRACRLQKCLNVGMNPNAIQRRDEIGPRKPKVSKHRLTCAQNFSFSGETQNNFSQK 128
Query: 504 ELDDA 518
+ + A
Sbjct: 129 QYNAA 133
>Z83102-11|CAB05470.1| 310|Caenorhabditis elegans Hypothetical
protein E03H4.13 protein.
Length = 310
Score = 35.5 bits (78), Expect = 0.032
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = +3
Query: 222 KETLLNVAVTRRASSGDLYNRRYNTG---PARRTSSVVSSGLTGNRCQYCRLKKCIAVGM 392
K T + +T S + R N PA + +++ C+ CR KC+ GM
Sbjct: 15 KGTRRHFGITACMSCSSFFRRSLNCKFYCPANNSCTILDD--QKQFCRSCRYNKCVQSGM 72
Query: 393 SRDAVR---FGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLAR 536
RD VR + R R++A+ A + S ++E+ + +A +AR
Sbjct: 73 RRDCVRKQSYRRQAGRKEAKSPAVSCSNKLSESYEELLNFYVKEANESIAR 123
>Z81492-11|CAB04035.1| 310|Caenorhabditis elegans Hypothetical
protein E03H4.13 protein.
Length = 310
Score = 35.5 bits (78), Expect = 0.032
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = +3
Query: 222 KETLLNVAVTRRASSGDLYNRRYNTG---PARRTSSVVSSGLTGNRCQYCRLKKCIAVGM 392
K T + +T S + R N PA + +++ C+ CR KC+ GM
Sbjct: 15 KGTRRHFGITACMSCSSFFRRSLNCKFYCPANNSCTILDD--QKQFCRSCRYNKCVQSGM 72
Query: 393 SRDAVR---FGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLLAR 536
RD VR + R R++A+ A + S ++E+ + +A +AR
Sbjct: 73 RRDCVRKQSYRRQAGRKEAKSPAVSCSNKLSESYEELLNFYVKEANESIAR 123
>U53154-2|AAC25856.1| 358|Caenorhabditis elegans Hypothetical
protein C33G8.12 protein.
Length = 358
Score = 35.5 bits (78), Expect = 0.032
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 282 RRYNTGPARRTSSVVSSGLTGNR-CQYCRLKKCIAVGMSRDAVRFGRVPKREKARIL 449
RRY + S L + C+YCR+ KC+ +GM + V+ P REK +IL
Sbjct: 39 RRYVHSTKQEISCTCDQRLISSHPCRYCRMLKCMKIGMCKTQVQ----PPREKNKIL 91
>U97551-2|AAP13776.1| 434|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 14, isoform b protein.
Length = 434
Score = 35.1 bits (77), Expect = 0.042
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
N C+YCR +KC+A GM +A+ + E+ RI + ++ S E + +E +P+
Sbjct: 70 NACRYCRFQKCLADGMKPEAI------QNERDRIGSTKRRKRSGANSENNSDSEGTPSPK 123
Query: 525 L 527
+
Sbjct: 124 I 124
Score = 33.9 bits (74), Expect = 0.096
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRES 349
+GFFRRS+ Q +QY C N+QC+I + +R +
Sbjct: 41 KGFFRRSVWQNLQY-TCRFNKQCNIDKDHRNA 71
>U97551-1|AAP13775.1| 435|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 14, isoform a protein.
Length = 435
Score = 35.1 bits (77), Expect = 0.042
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
N C+YCR +KC+A GM +A+ + E+ RI + ++ S E + +E +P+
Sbjct: 70 NACRYCRFQKCLADGMKPEAI------QNERDRIGSTKRRKRSGANSENNSDSEGTPSPK 123
Query: 525 L 527
+
Sbjct: 124 I 124
Score = 33.9 bits (74), Expect = 0.096
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRES 349
+GFFRRS+ Q +QY C N+QC+I + +R +
Sbjct: 41 KGFFRRSVWQNLQY-TCRFNKQCNIDKDHRNA 71
>U10438-5|AAA19086.1| 395|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 10 protein.
Length = 395
Score = 35.1 bits (77), Expect = 0.042
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C++CR +KC+ VGM R+A++ R P
Sbjct: 70 CRHCRFEKCLQVGMDRNAIQQNRDP 94
>AY204168-1|AAO39172.1| 395|Caenorhabditis elegans nuclear receptor
NHR-10 protein.
Length = 395
Score = 35.1 bits (77), Expect = 0.042
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C++CR +KC+ VGM R+A++ R P
Sbjct: 70 CRHCRFEKCLQVGMDRNAIQQNRDP 94
>AF273830-1|AAG15179.1| 598|Caenorhabditis elegans nuclear receptor
NHR-88 protein.
Length = 598
Score = 35.1 bits (77), Expect = 0.042
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+YCR ++C+ VGM +A+R
Sbjct: 91 NACRYCRFQRCLTVGMEPEAIR 112
>AC006671-3|AAR30203.1| 235|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform c protein.
Length = 235
Score = 35.1 bits (77), Expect = 0.042
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+YCR ++C+ VGM +A+R
Sbjct: 86 NACRYCRFQRCLTVGMEPEAIR 107
>AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform b protein.
Length = 459
Score = 35.1 bits (77), Expect = 0.042
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+YCR ++C+ VGM +A+R
Sbjct: 86 NACRYCRFQRCLTVGMEPEAIR 107
>AC006671-1|AAF39914.2| 593|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform a protein.
Length = 593
Score = 35.1 bits (77), Expect = 0.042
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+YCR ++C+ VGM +A+R
Sbjct: 86 NACRYCRFQRCLTVGMEPEAIR 107
>Z93374-9|CAC70078.1| 116|Caenorhabditis elegans Hypothetical
protein C06C6.5b protein.
Length = 116
Score = 34.7 bits (76), Expect = 0.055
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR---VPKREKARILAAMQQSSSS 476
C+ CR+KKC+++GM+ + V+ R PK+ K ++ SSSS
Sbjct: 52 CRECRIKKCLSIGMNPEKVQEKRERHPPKKNKPPSISEALTSSSS 96
>Z93374-8|CAB07555.1| 359|Caenorhabditis elegans Hypothetical
protein C06C6.5a protein.
Length = 359
Score = 34.7 bits (76), Expect = 0.055
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR---VPKREKARILAAMQQSSSS 476
C+ CR+KKC+++GM+ + V+ R PK+ K ++ SSSS
Sbjct: 52 CRECRIKKCLSIGMNPEKVQEKRERHPPKKNKPPSISEALTSSSS 96
>Z81496-8|CAB04068.1| 498|Caenorhabditis elegans Hypothetical
protein F09C6.8 protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.055
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+YCR +KC AVGM A++
Sbjct: 86 NACRYCRFQKCFAVGMHSSAIQ 107
>Z81142-8|CAO82053.1| 370|Caenorhabditis elegans Hypothetical
protein ZK1037.13 protein.
Length = 370
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +3
Query: 291 NTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVR 410
N G ++ S+ + + N C+ CRL+KC+ VGM+ A++
Sbjct: 75 NVGDCKKQSACEINHESKNSCRSCRLQKCLNVGMNPKAIQ 114
>Z79604-3|CAD36502.1| 817|Caenorhabditis elegans Hypothetical
protein ZK662.3b protein.
Length = 817
Score = 34.7 bits (76), Expect = 0.055
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAV--------RFGRVPKREKARILAAMQQSSSSRAHEQAAAAE 506
CQ CRL KC AVGM ++ + + RV + + R+ AM ++ E +
Sbjct: 152 CQRCRLTKCFAVGMKKEWIMSEEARLEKKQRVEENRERRLQDAMNRALEEACMEDESENS 211
Query: 507 LDDAP 521
D+AP
Sbjct: 212 YDEAP 216
>Z70782-2|CAA94839.1| 387|Caenorhabditis elegans Hypothetical
protein R04B5.3 protein.
Length = 387
Score = 34.7 bits (76), Expect = 0.055
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR-VPKREKARILAAMQQS 467
C+ CRL KC+ +GM R V+ R P++E+ IL +M S
Sbjct: 75 CKSCRLNKCLNLGMKRSCVQPRRDKPQKEEKLILPSMNVS 114
>AL021387-2|CAA16168.1| 463|Caenorhabditis elegans Hypothetical
protein H01A20.1 protein.
Length = 463
Score = 34.7 bits (76), Expect = 0.055
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
N C+ CR +KC+ VGM DA+R P R+K ++++ + + + L D P
Sbjct: 103 NVCRSCRFQKCLEVGMEPDAIR----PDRDKTGRQKNPRRNTEGSIKKVSVGSILGDLPC 158
Query: 525 L 527
L
Sbjct: 159 L 159
>AF332205-1|AAK17976.1| 817|Caenorhabditis elegans nuclear receptor
NHR-48 protein.
Length = 817
Score = 34.7 bits (76), Expect = 0.055
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAV--------RFGRVPKREKARILAAMQQSSSSRAHEQAAAAE 506
CQ CRL KC AVGM ++ + + RV + + R+ AM ++ E +
Sbjct: 152 CQRCRLTKCFAVGMKKEWIMSEEARLEKKQRVEENRERRLQDAMNRALEEACMEDESENS 211
Query: 507 LDDAP 521
D+AP
Sbjct: 212 YDEAP 216
>AF273796-1|AAG15144.1| 116|Caenorhabditis elegans nuclear receptor
NHR-50 protein.
Length = 116
Score = 34.7 bits (76), Expect = 0.055
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR---VPKREKARILAAMQQSSSS 476
C+ CR+KKC+++GM+ + V+ R PK+ K ++ SSSS
Sbjct: 52 CRECRIKKCLSIGMNPEKVQEKRERHPPKKNKPPSISEALTSSSS 96
>AF273769-1|AAG15118.1| 463|Caenorhabditis elegans nuclear receptor
NHR-3 protein.
Length = 463
Score = 34.7 bits (76), Expect = 0.055
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
N C+ CR +KC+ VGM DA+R P R+K ++++ + + + L D P
Sbjct: 103 NVCRSCRFQKCLEVGMEPDAIR----PDRDKTGRQKNPRRNTEGSIKKVSVGSILGDLPC 158
Query: 525 L 527
L
Sbjct: 159 L 159
>AF083222-1|AAD03680.1| 463|Caenorhabditis elegans nuclear receptor
NHR-3 protein.
Length = 463
Score = 34.7 bits (76), Expect = 0.055
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
N C+ CR +KC+ VGM DA+R P R+K ++++ + + + L D P
Sbjct: 103 NVCRSCRFQKCLEVGMEPDAIR----PDRDKTGRQKNPRRNTEGSIKKVSVGSILGDLPC 158
Query: 525 L 527
L
Sbjct: 159 L 159
>AC024776-17|ABN43080.1| 365|Caenorhabditis elegans Hypothetical
protein Y41D4B.27 protein.
Length = 365
Score = 34.7 bits (76), Expect = 0.055
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR--VPKREKARI 446
C+ CR KC+AVGM ++ V+ GR KRE A +
Sbjct: 59 CKSCRFAKCLAVGMKKETVQQGREGYGKREMALV 92
>Z83109-8|CAB05521.2| 311|Caenorhabditis elegans Hypothetical
protein F44G3.9 protein.
Length = 311
Score = 34.3 bits (75), Expect = 0.073
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
NRC+ CR+KKC GM+++AV+
Sbjct: 93 NRCKSCRIKKCFKKGMNKNAVQ 114
>Z81531-2|CAB04316.1| 422|Caenorhabditis elegans Hypothetical
protein F36D3.2 protein.
Length = 422
Score = 34.3 bits (75), Expect = 0.073
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 279 NRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRV 422
NR+Y + S C++CR KKCI +GM+ + VR +V
Sbjct: 48 NRKYKCTRKSGKCKIGSDETKDVMCKFCRFKKCIDLGMTTENVRTDQV 95
>Z68222-9|CAE46689.1| 631|Caenorhabditis elegans Hypothetical
protein F58G6.5c protein.
Length = 631
Score = 34.3 bits (75), Expect = 0.073
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR 419
NRC+ CRL+KC VGM AV+ R
Sbjct: 201 NRCRACRLRKCFTVGMDARAVQSER 225
>Z68222-8|CAC70146.2| 613|Caenorhabditis elegans Hypothetical
protein F58G6.5b protein.
Length = 613
Score = 34.3 bits (75), Expect = 0.073
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR 419
NRC+ CRL+KC VGM AV+ R
Sbjct: 183 NRCRACRLRKCFTVGMDARAVQSER 207
>Z68217-11|CAE46673.1| 631|Caenorhabditis elegans Hypothetical
protein F58G6.5c protein.
Length = 631
Score = 34.3 bits (75), Expect = 0.073
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR 419
NRC+ CRL+KC VGM AV+ R
Sbjct: 201 NRCRACRLRKCFTVGMDARAVQSER 225
>Z68217-10|CAC70099.2| 613|Caenorhabditis elegans Hypothetical
protein F58G6.5b protein.
Length = 613
Score = 34.3 bits (75), Expect = 0.073
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR 419
NRC+ CRL+KC VGM AV+ R
Sbjct: 183 NRCRACRLRKCFTVGMDARAVQSER 207
>Z68217-4|CAA92467.2| 499|Caenorhabditis elegans Hypothetical
protein F58G6.5a protein.
Length = 499
Score = 34.3 bits (75), Expect = 0.073
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR 419
NRC+ CRL+KC VGM AV+ R
Sbjct: 69 NRCRACRLRKCFTVGMDARAVQSER 93
>AF273780-1|AAG15129.1| 509|Caenorhabditis elegans nuclear receptor
NHR-34 protein.
Length = 509
Score = 34.3 bits (75), Expect = 0.073
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR 419
NRC+ CRL+KC VGM AV+ R
Sbjct: 79 NRCRACRLRKCFTVGMDARAVQSER 103
>AF016675-4|AAB66137.1| 356|Caenorhabditis elegans Hypothetical
protein T27B7.5 protein.
Length = 356
Score = 34.3 bits (75), Expect = 0.073
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR--VPKREKAR 443
C+ CRL+KCI GM ++ R +PK+ KAR
Sbjct: 107 CKPCRLRKCIENGMDSSKFQYNRDTIPKKPKAR 139
>AF022976-16|AAC69076.2| 276|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 132 protein.
Length = 276
Score = 33.9 bits (74), Expect = 0.096
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR 419
C+ CRLK+CIAVGM+ + +F R
Sbjct: 61 CKPCRLKRCIAVGMNTENFQFDR 83
>AC024776-13|AAK68483.1| 374|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 122 protein.
Length = 374
Score = 33.9 bits (74), Expect = 0.096
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR--VPKREKARILAAMQQSSSSR 479
C+ CR KC+ VGM +AV+ R KR + I AA SS R
Sbjct: 63 CRKCRFAKCLEVGMKSEAVQKNRDSYGKRRELAIYAANPSPSSVR 107
>Z81074-1|CAB03044.2| 492|Caenorhabditis elegans Hypothetical
protein F32B6.1 protein.
Length = 492
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+ CRLKKC VGM+ D+V+
Sbjct: 100 NVCRSCRLKKCFEVGMNPDSVQ 121
>U97008-3|AAB52308.1| 380|Caenorhabditis elegans Hypothetical
protein C03G6.8 protein.
Length = 380
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVR 410
RC+ CR KKCI VGM+R+ ++
Sbjct: 75 RCRACRYKKCIDVGMNRNGIQ 95
>U55365-8|AAA98573.2| 383|Caenorhabditis elegans Hypothetical
protein C12D5.2 protein.
Length = 383
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRF 413
RC+ CR KKC+ VGM+ +A+ F
Sbjct: 75 RCRACRFKKCLLVGMNPNALNF 96
>AY204177-1|AAO39181.1| 385|Caenorhabditis elegans nuclear receptor
NHR-68 protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP----KREKARILAAMQQSSSSRAH 485
C++CR +KC+ VGM + +++ R P KR K + M + S ++
Sbjct: 59 CRFCRFEKCLKVGMDKTSLQASRDPIGYTKRNKKTLRHPMNELSGDESN 107
>AL022272-2|CAA18351.1| 385|Caenorhabditis elegans Hypothetical
protein H12C20.3 protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP----KREKARILAAMQQSSSSRAH 485
C++CR +KC+ VGM + +++ R P KR K + M + S ++
Sbjct: 59 CRFCRFEKCLKVGMDKTSLQASRDPIGYTKRNKKTLRHPMNELSGDESN 107
>AF083223-1|AAD03681.1| 492|Caenorhabditis elegans nuclear receptor
NHR-4 protein.
Length = 492
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+ CRLKKC VGM+ D+V+
Sbjct: 100 NVCRSCRLKKCFEVGMNPDSVQ 121
>Z70210-8|CAA94154.2| 414|Caenorhabditis elegans Hypothetical
protein K08H2.8 protein.
Length = 414
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKRE 434
C+ CRL KC AVGM + AV+ PKRE
Sbjct: 72 CRACRLAKCYAVGMDKKAVQ----PKRE 95
>U41559-7|AAV34794.1| 544|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 31, isoform c protein.
Length = 544
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+YCR ++CI GM AVR
Sbjct: 93 NSCRYCRFQRCIQAGMDPKAVR 114
>U41559-6|AAC24263.1| 583|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 31, isoform a protein.
Length = 583
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+YCR ++CI GM AVR
Sbjct: 132 NSCRYCRFQRCIQAGMDPKAVR 153
>AY204169-1|AAO39173.1| 414|Caenorhabditis elegans nuclear receptor
NHR-32 protein.
Length = 414
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKRE 434
C+ CRL KC AVGM + AV+ PKRE
Sbjct: 72 CRACRLAKCYAVGMDKKAVQ----PKRE 95
>AF273779-1|AAG15128.1| 565|Caenorhabditis elegans nuclear receptor
NHR-31 protein.
Length = 565
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+YCR ++CI GM AVR
Sbjct: 114 NSCRYCRFQRCIQAGMDPKAVR 135
>AF273778-1|AAG15127.1| 595|Caenorhabditis elegans nuclear receptor
NHR-31 protein.
Length = 595
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+YCR ++CI GM AVR
Sbjct: 144 NSCRYCRFQRCIQAGMDPKAVR 165
>AF273776-1|AAG15125.1| 583|Caenorhabditis elegans nuclear receptor
NHR-31 protein.
Length = 583
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+YCR ++CI GM AVR
Sbjct: 132 NSCRYCRFQRCIQAGMDPKAVR 153
>AC024776-20|AAK68473.2| 460|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 274 protein.
Length = 460
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 446
C+YCRL+KC VGM A++ V K +I
Sbjct: 88 CRYCRLQKCYTVGMKASAIQRRDVMGPRKPKI 119
>Z98877-17|CAB11571.1| 389|Caenorhabditis elegans Hypothetical
protein Y51A2D.17 protein.
Length = 389
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVR 410
C+ CR KC+AVGM R+AV+
Sbjct: 63 CRACRFAKCMAVGMKREAVQ 82
>Z83240-1|CAB05815.2| 373|Caenorhabditis elegans Hypothetical
protein T23H4.2 protein.
Length = 373
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR--VPKREK 437
N C+ CRL+KC+ GM +A++ R + KR+K
Sbjct: 56 NACRACRLQKCVKAGMKSNAIQNERDAIGKRKK 88
Score = 31.9 bits (69), Expect = 0.39
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRES 349
SCD +GFFRRSI+++ Y+ C Q C + + R +
Sbjct: 22 SCDGCKGFFRRSIRKRYHYQ-CRFEQNCDVTKNKRNA 57
>Z82259-8|CAC70072.3| 410|Caenorhabditis elegans Hypothetical
protein C28D4.9 protein.
Length = 410
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR 419
NRC+ CR KC+ VGM AV+ R
Sbjct: 65 NRCRACRFNKCVMVGMDARAVQSER 89
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILR 334
+GFFRRS+ +K Y C N+ C +L+
Sbjct: 36 KGFFRRSVWEKRTYF-CIANEDCEVLQ 61
>Z81487-4|CAB03998.2| 420|Caenorhabditis elegans Hypothetical
protein C54E10.5 protein.
Length = 420
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 279 NRRYNTGPARRTSSV-VSSGLTGNRCQYCRLKKCIAVGMSRDAVR 410
NR+Y ++T + +G C++CR KKCI +GM+ + VR
Sbjct: 48 NRKYKC--IQKTGKCEIGAGGEEKLCKFCRFKKCIDLGMTTENVR 90
>Z75951-1|CAB00091.2| 408|Caenorhabditis elegans Hypothetical
protein F14A5.1 protein.
Length = 408
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
C+ CR CI GMS+D +R G V + + + +S R ++ +
Sbjct: 111 CRACRYNNCIRAGMSKDYIRRGNVDETKNRKTFRKRTIRNSIRRNKSS 158
>Z68270-10|CAA92572.2| 459|Caenorhabditis elegans Hypothetical
protein ZC410.1a protein.
Length = 459
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVR-----FGRVPKREKARILAAMQQSSSSRAHEQAAAAELDD 515
C+ CRL+KC + GM + VR F +++ A S+S + ++ E+DD
Sbjct: 61 CRECRLRKCYSAGMRSELVRSKRENFACTRRKDSRNNSDAAPNSNSPSTRQSSSPEEMDD 120
>Z54270-6|CAA91028.1| 572|Caenorhabditis elegans Hypothetical
protein F11C1.6a protein.
Length = 572
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC CR +KC+ +GM +AVR R+
Sbjct: 69 RCPSCRFQKCLTMGMKMEAVRADRM 93
Score = 30.7 bits (66), Expect = 0.90
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVP 355
+GFF+R++Q K QY+ C+ C + R R+ P
Sbjct: 39 KGFFKRTVQNKKQYQ-CSAEANCHVDRTCRKRCP 71
>U53154-4|AAC25851.1| 346|Caenorhabditis elegans Hypothetical
protein C33G8.9 protein.
Length = 346
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKRE 434
C+YCR+ KC+ VGM++ V+ R +E
Sbjct: 52 CRYCRMLKCVEVGMAKCKVQATRQKNKE 79
>U41556-12|AAK39191.2| 477|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 120 protein.
Length = 477
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521
C+ CR +KC+ VGM+ A++F +A + + + S+ + + A AP
Sbjct: 143 CRACRFEKCVRVGMNPSAIQFPSSKNHNEADDMDSGDEDSNIQDDKSLALIPFVSAP 199
>U40160-3|AAA81157.2| 363|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 137, isoform a protein.
Length = 363
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
+C+ CRL +C+ GM ++AV G V EK
Sbjct: 54 KCRSCRLDRCLQQGMRKEAVTSGIVGNEEK 83
>AY305848-1|AAR11992.1| 477|Caenorhabditis elegans nuclear receptor
NHR-120 protein.
Length = 477
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAP 521
C+ CR +KC+ VGM+ A++F +A + + + S+ + + A AP
Sbjct: 143 CRACRFEKCVRVGMNPSAIQFPSSKNHNEADDMDSGDEDSNIQDDKSLALIPFVSAP 199
>AY305838-1|AAR11983.1| 459|Caenorhabditis elegans nuclear receptor
NHR-11 protein.
Length = 459
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVR-----FGRVPKREKARILAAMQQSSSSRAHEQAAAAELDD 515
C+ CRL+KC + GM + VR F +++ A S+S + ++ E+DD
Sbjct: 61 CRECRLRKCYSAGMRSELVRSKRENFACTRRKDSRNNSDAAPNSNSPSTRQSSSPEEMDD 120
>AY204185-1|AAO39189.1| 400|Caenorhabditis elegans nuclear receptor
NHR-101 protein.
Length = 400
Score = 32.7 bits (71), Expect = 0.22
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR 419
C++CR +KCI VGM + A++ R
Sbjct: 68 CRFCRFEKCIQVGMDKSALQASR 90
>AY204178-1|AAO39182.1| 373|Caenorhabditis elegans nuclear receptor
NHR-69 protein.
Length = 373
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGR--VPKREK 437
N C+ CRL+KC+ GM +A++ R + KR+K
Sbjct: 56 NACRACRLQKCVKAGMKSNAIQNERDAIGKRKK 88
Score = 31.9 bits (69), Expect = 0.39
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINRES 349
SCD +GFFRRSI+++ Y+ C Q C + + R +
Sbjct: 22 SCDGCKGFFRRSIRKRYHYQ-CRFEQNCDVTKNKRNA 57
>AL032632-15|CAA21593.1| 344|Caenorhabditis elegans Hypothetical
protein H22D14.1 protein.
Length = 344
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
C+ CR CI GMS+D +R G V + + + +S R ++ +
Sbjct: 61 CRACRYNNCIRAGMSKDYIRRGNVDETKNRKTFRKRTIRNSIRRNKSS 108
>AL022273-1|CAA18356.1| 344|Caenorhabditis elegans Hypothetical
protein H22D14.1 protein.
Length = 344
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQA 494
C+ CR CI GMS+D +R G V + + + +S R ++ +
Sbjct: 61 CRACRYNNCIRAGMSKDYIRRGNVDETKNRKTFRKRTIRNSIRRNKSS 108
>AL022272-4|CAC42310.2| 391|Caenorhabditis elegans Hypothetical
protein H12C20.6a protein.
Length = 391
Score = 32.7 bits (71), Expect = 0.22
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR 419
C++CR +KCI VGM + A++ R
Sbjct: 59 CRFCRFEKCIQVGMDKSALQASR 81
>AL021497-21|CAA16413.1| 389|Caenorhabditis elegans Hypothetical
protein Y51A2D.17 protein.
Length = 389
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVR 410
C+ CR KC+AVGM R+AV+
Sbjct: 63 CRACRFAKCMAVGMKREAVQ 82
>AF273823-1|AAG15172.1| 388|Caenorhabditis elegans nuclear receptor
NHR-70 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVR 410
C+ CR KC+AVGM R+AV+
Sbjct: 62 CRACRFAKCMAVGMKREAVQ 81
>AF273822-1|AAG15171.1| 387|Caenorhabditis elegans nuclear receptor
NHR-70 protein.
Length = 387
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVR 410
C+ CR KC+AVGM R+AV+
Sbjct: 61 CRACRFAKCMAVGMKREAVQ 80
>AF273821-1|AAG15170.1| 383|Caenorhabditis elegans nuclear receptor
NHR-70 protein.
Length = 383
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVR 410
C+ CR KC+AVGM R+AV+
Sbjct: 57 CRACRFAKCMAVGMKREAVQ 76
>AF179216-1|AAF67040.1| 233|Caenorhabditis elegans NHR-25 protein.
Length = 233
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC CR +KC+ +GM +AVR R+
Sbjct: 69 RCPSCRFQKCLTMGMKMEAVRADRM 93
Score = 30.7 bits (66), Expect = 0.90
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVP 355
+GFF+R++Q K QY+ C+ C + R R+ P
Sbjct: 39 KGFFKRTVQNKKQYQ-CSAEANCHVDRTCRKRCP 71
>AF179214-1|AAF67038.1| 568|Caenorhabditis elegans NHR-25 alpha
protein.
Length = 568
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRV 422
RC CR +KC+ +GM +AVR R+
Sbjct: 65 RCPSCRFQKCLTMGMKMEAVRADRM 89
Score = 30.7 bits (66), Expect = 0.90
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSILRINRESVP 355
+GFF+R++Q K QY+ C+ C + R R+ P
Sbjct: 35 KGFFKRTVQNKKQYQ-CSAEANCHVDRTCRKRCP 67
>AF083227-1|AAD03685.1| 290|Caenorhabditis elegans nuclear receptor
NHR-11 protein.
Length = 290
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVR-----FGRVPKREKARILAAMQQSSSSRAHEQAAAAELDD 515
C+ CRL+KC + GM + VR F +++ A S+S + ++ E+DD
Sbjct: 13 CRECRLRKCYSAGMRSELVRSKRENFACTRRKDSRNNSDAAPNSNSPSTRQSSSPEEMDD 72
>Z81575-8|CAB04634.1| 433|Caenorhabditis elegans Hypothetical
protein R08H2.9 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 315 SSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVR 410
+SV+ N C+ CRL+KC+ VGM +AV+
Sbjct: 126 NSVIIIAEKKNCCRSCRLQKCLKVGMDPNAVQ 157
>U23518-8|AAO38654.1| 400|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform b protein.
Length = 400
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+ CRLK+CI VGM+ AV+
Sbjct: 32 NACRSCRLKECIKVGMNPRAVQ 53
>U23518-7|AAO38655.1| 440|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform c protein.
Length = 440
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+ CRLK+CI VGM+ AV+
Sbjct: 72 NACRSCRLKECIKVGMNPRAVQ 93
>U23518-6|AAD31548.2| 446|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform d protein.
Length = 446
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+ CRLK+CI VGM+ AV+
Sbjct: 80 NACRSCRLKECIKVGMNPRAVQ 101
>U23518-5|AAO38653.1| 448|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform a protein.
Length = 448
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+ CRLK+CI VGM+ AV+
Sbjct: 80 NACRSCRLKECIKVGMNPRAVQ 101
>U23518-4|ABB88231.1| 450|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform e protein.
Length = 450
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+ CRLK+CI VGM+ AV+
Sbjct: 80 NACRSCRLKECIKVGMNPRAVQ 101
>AL021470-3|CAA16291.2| 414|Caenorhabditis elegans Hypothetical
protein Y17D7A.1 protein.
Length = 414
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAH 485
C++CRL+KC +GM+ +F R P K + + R H
Sbjct: 75 CKFCRLQKCYEIGMNSANFQFDRDPISTKLTNVPNSMEGFLGRPH 119
>AF273836-1|AAG15184.1| 362|Caenorhabditis elegans nuclear receptor
NHR-92 protein.
Length = 362
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+ CR KCI VGM R++V+
Sbjct: 63 NMCKKCRYTKCILVGMKRESVQ 84
>AF083234-1|AAD03692.1| 400|Caenorhabditis elegans nuclear receptor
NHR-21b protein.
Length = 400
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+ CRLK+CI VGM+ AV+
Sbjct: 32 NACRSCRLKECIKVGMNPRAVQ 53
>AF083233-1|AAD03691.1| 458|Caenorhabditis elegans nuclear receptor
NHR-21a protein.
Length = 458
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+ CRLK+CI VGM+ AV+
Sbjct: 92 NACRSCRLKECIKVGMNPRAVQ 113
>AC024776-15|AAK68482.2| 354|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 92 protein.
Length = 354
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+ CR KCI VGM R++V+
Sbjct: 55 NMCKKCRYTKCILVGMKRESVQ 76
>Z98877-9|CAB63405.1| 348|Caenorhabditis elegans Hypothetical
protein Y69H2.8 protein.
Length = 348
Score = 31.9 bits (69), Expect = 0.39
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVR 410
C+YCR++KC+A GM A++
Sbjct: 74 CRYCRMQKCLAAGMDPRAIQ 93
>Z93374-3|CAB07558.2| 363|Caenorhabditis elegans Hypothetical
protein C06C6.4 protein.
Length = 363
Score = 31.9 bits (69), Expect = 0.39
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV--PKREKARILAAMQQSSSS 476
C+ CR++KC GM+ + V+ R PK+ K + A S+SS
Sbjct: 55 CRECRIQKCFEAGMNPEKVQVKREKHPKKLKMELAHASLSSASS 98
>Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKRE 434
N C+ CRLK+C GM+ AV+ RV + +
Sbjct: 148 NVCRACRLKQCFVAGMNPRAVQSERVEREQ 177
>Z81142-2|CAB03504.1| 337|Caenorhabditis elegans Hypothetical
protein ZK1037.5 protein.
Length = 337
Score = 31.9 bits (69), Expect = 0.39
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 339 TGNRCQYCRLKKCIAVGMSRDAVR 410
T N C+ CRL+KC+ VGM+ A++
Sbjct: 62 TKNCCRSCRLQKCLQVGMNPKAIQ 85
>U50311-7|AAA92311.1| 401|Caenorhabditis elegans Hypothetical
protein C25E10.1 protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.39
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR 419
C++CR +KC+ +GM+ D V++ R
Sbjct: 59 CRHCRFQKCLRMGMTADNVQWNR 81
>AY204190-1|AAO39194.1| 382|Caenorhabditis elegans nuclear receptor
NHR-106 protein.
Length = 382
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 243 AVTRRASSGDLYNRRYNTGPARRTSSVVSS--GLTGN--RCQYCRLKKCIAVGMSRDAVR 410
A+T R + + R NT R++ S+ TG +C+ CR++KCI +GM + V+
Sbjct: 19 AITCRGCAA-FFRRAVNTKTNRKSCKYSSNCTNFTGKFPQCKSCRMRKCIKMGMMPEKVK 77
>AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKRE 434
N C+ CRLK+C GM+ AV+ RV + +
Sbjct: 148 NVCRACRLKQCFVAGMNPRAVQSERVEREQ 177
>AF273815-1|AAG15164.1| 365|Caenorhabditis elegans nuclear receptor
NHR-63 protein.
Length = 365
Score = 31.9 bits (69), Expect = 0.39
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRV--PKREKARILAAMQQSSSS 476
C+ CR++KC GM+ + V+ R PK+ K + A S+SS
Sbjct: 57 CRECRIQKCFEAGMNPEKVQVKREKHPKKLKMELAHASLSSASS 100
>AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 489
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKRE 434
N C+ CRLK+C GM+ AV+ RV + +
Sbjct: 122 NVCRACRLKQCFVAGMNPRAVQSERVEREQ 151
>AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKRE 434
N C+ CRLK+C GM+ AV+ RV + +
Sbjct: 87 NVCRACRLKQCFVAGMNPRAVQSERVEREQ 116
>AF022978-5|AAG24181.2| 382|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 106 protein.
Length = 382
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 243 AVTRRASSGDLYNRRYNTGPARRTSSVVSS--GLTGN--RCQYCRLKKCIAVGMSRDAVR 410
A+T R + + R NT R++ S+ TG +C+ CR++KCI +GM + V+
Sbjct: 19 AITCRGCAA-FFRRAVNTKTNRKSCKYSSNCTNFTGKFPQCKSCRMRKCIKMGMMPEKVK 77
>AF016421-11|AAM45373.2| 417|Caenorhabditis elegans Hypothetical
protein F44E7.8 protein.
Length = 417
Score = 31.9 bits (69), Expect = 0.39
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR 419
C+ CR KKC+ +GM+ D V++ R
Sbjct: 79 CRLCRYKKCLQLGMTADNVQWNR 101
>AC006675-8|AAK84554.1| 414|Caenorhabditis elegans Hypothetical
protein M02H5.4 protein.
Length = 414
Score = 31.9 bits (69), Expect = 0.39
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKA 440
C+ CRLKKC +GM + +F R P + +
Sbjct: 74 CKKCRLKKCFEIGMKIENFQFERDPYKRSS 103
>Z83233-10|CAB05768.2| 364|Caenorhabditis elegans Hypothetical
protein K06B4.11 protein.
Length = 364
Score = 31.5 bits (68), Expect = 0.51
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+ CR +KC+ VGM R +V+
Sbjct: 73 NMCRACRYEKCLEVGMQRSSVQ 94
>Z81056-6|CAB02906.1| 398|Caenorhabditis elegans Hypothetical
protein F09F3.10 protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.51
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVR 410
C+ CRL+KC+ VGM + AV+
Sbjct: 85 CRACRLQKCLQVGMKQSAVK 104
>Z70204-5|CAI46566.1| 379|Caenorhabditis elegans Hypothetical
protein C11G6.4b protein.
Length = 379
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVR 410
C+ CR KCIAVGM + AV+
Sbjct: 2 CRACRFTKCIAVGMRKSAVQ 21
>Z70204-4|CAA94114.2| 437|Caenorhabditis elegans Hypothetical
protein C11G6.4a protein.
Length = 437
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVR 410
C+ CR KCIAVGM + AV+
Sbjct: 60 CRACRFTKCIAVGMRKSAVQ 79
>U97008-1|AAB52310.1| 370|Caenorhabditis elegans Hypothetical
protein C03G6.10 protein.
Length = 370
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVPKREK 437
RC+ CR +KC+ VGM++ A+ ++P+R +
Sbjct: 65 RCRACRYRKCLDVGMNQKAI---QIPERNQ 91
>AY305832-1|AAR11977.1| 437|Caenorhabditis elegans nuclear receptor
NHR-28 protein.
Length = 437
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVR 410
C+ CR KCIAVGM + AV+
Sbjct: 60 CRACRFTKCIAVGMRKSAVQ 79
>AY305831-1|AAR11976.1| 437|Caenorhabditis elegans nuclear receptor
NHR-28 protein.
Length = 437
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVR 410
C+ CR KCIAVGM + AV+
Sbjct: 60 CRACRFTKCIAVGMRKSAVQ 79
>AF273799-1|AAG15148.1| 365|Caenorhabditis elegans nuclear receptor
NHR-53 protein.
Length = 365
Score = 31.5 bits (68), Expect = 0.51
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+ CR +KC+ VGM R +V+
Sbjct: 74 NMCRACRYEKCLEVGMQRSSVQ 95
>AF273798-1|AAG15147.1| 366|Caenorhabditis elegans nuclear receptor
NHR-53 protein.
Length = 366
Score = 31.5 bits (68), Expect = 0.51
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVR 410
N C+ CR +KC+ VGM R +V+
Sbjct: 75 NMCRACRYEKCLEVGMQRSSVQ 96
>AF273775-1|AAG15124.1| 383|Caenorhabditis elegans nuclear receptor
NHR-28 protein.
Length = 383
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVR 410
C+ CR KCIAVGM + AV+
Sbjct: 6 CRACRFTKCIAVGMRKSAVQ 25
>AF273774-1|AAG15123.1| 433|Caenorhabditis elegans nuclear receptor
NHR-28 protein.
Length = 433
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVR 410
C+ CR KCIAVGM + AV+
Sbjct: 56 CRACRFTKCIAVGMRKSAVQ 75
>AF106581-7|ABC48241.1| 362|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 135 protein.
Length = 362
Score = 31.5 bits (68), Expect = 0.51
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP-KREKARILAAMQQSSSSRAHEQAAAAELDDAPRL 527
C++CR+++C+ GM AV+ R ++ + SSS HE + + D PRL
Sbjct: 61 CRFCRMERCVLAGMKTTAVQPPREKYSEDRGDSETSSCYSSSPYTHEVQSCSR--DIPRL 118
>AF067942-5|AAG45580.2| 345|Caenorhabditis elegans Hypothetical
protein ZK6.5 protein.
Length = 345
Score = 31.5 bits (68), Expect = 0.51
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDA-VRFGRVPKREKARILAAMQQSSSSRAHEQ 491
+C +CR +KCI VGM+ + + FG + K EK I + +Q+ AH +
Sbjct: 60 KCTFCRFQKCIQVGMTLPSYLHFGELTK-EKC-IDSTIQKLILMEAHRK 106
>AF039048-10|AAB94240.2| 421|Caenorhabditis elegans Hypothetical
protein F16B4.9 protein.
Length = 421
Score = 31.5 bits (68), Expect = 0.51
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGRVP 425
+C+ CR KC+ +GM+ + V++ R P
Sbjct: 78 QCRLCRFNKCVTLGMTSENVQWNRDP 103
>Z83233-2|CAB05761.1| 338|Caenorhabditis elegans Hypothetical
protein K06B4.2 protein.
Length = 338
Score = 31.1 bits (67), Expect = 0.68
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGM 392
+CQ+CR KKC+ +GM
Sbjct: 54 KCQFCRFKKCLEIGM 68
>AY305847-1|AAR11991.1| 461|Caenorhabditis elegans nuclear receptor
NHR-121 protein.
Length = 461
Score = 31.1 bits (67), Expect = 0.68
Identities = 23/86 (26%), Positives = 37/86 (43%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
C+ CR KCI +GM R AV+ R + +I+ ++S + E A P+
Sbjct: 74 CRACRYHKCINMGMERSAVQPRRDCNAGRRKIM--YNSTNSLKTQEHTFAPPTPTVPQTT 131
Query: 531 ARVVRAHLDTCEFHA*SRRFHASQSF 608
+V D + S H +QS+
Sbjct: 132 TVIVTK--DERIYEDSSPEIHYAQSY 155
>AL132853-2|CAB60441.2| 424|Caenorhabditis elegans Hypothetical
protein Y80D3A.4 protein.
Length = 424
Score = 31.1 bits (67), Expect = 0.68
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 297 GPARRTSSV-VSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARIL 449
GP +++ + + +G +C+ CRL++C VGM+ +F R R K I+
Sbjct: 64 GPCKKSRTCNLFNGNGWFQCKKCRLERCYKVGMTMKNFQFQRDHIRSKIEII 115
>AF273797-2|AAG15146.1| 338|Caenorhabditis elegans nuclear receptor
NHR-52 protein.
Length = 338
Score = 31.1 bits (67), Expect = 0.68
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGM 392
+CQ+CR KKC+ +GM
Sbjct: 54 KCQFCRFKKCLEIGM 68
>AF099915-4|AAC68773.2| 461|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 121 protein.
Length = 461
Score = 31.1 bits (67), Expect = 0.68
Identities = 23/86 (26%), Positives = 37/86 (43%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
C+ CR KCI +GM R AV+ R + +I+ ++S + E A P+
Sbjct: 74 CRACRYHKCINMGMERSAVQPRRDCNAGRRKIM--YNSTNSLKTQEHTFAPPTPTVPQTT 131
Query: 531 ARVVRAHLDTCEFHA*SRRFHASQSF 608
+V D + S H +QS+
Sbjct: 132 TVIVTK--DERIYEDSSPEIHYAQSY 155
>AF016438-3|AAQ62456.1| 173|Caenorhabditis elegans Hypothetical
protein F44C8.9b protein.
Length = 173
Score = 31.1 bits (67), Expect = 0.68
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRF 413
RC+ CRLKKC VGM DA +F
Sbjct: 63 RCKICRLKKCYKVGM--DASKF 82
>AF016438-2|AAQ62455.1| 407|Caenorhabditis elegans Hypothetical
protein F44C8.9a protein.
Length = 407
Score = 31.1 bits (67), Expect = 0.68
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRF 413
RC+ CRLKKC VGM DA +F
Sbjct: 63 RCKICRLKKCYKVGM--DASKF 82
>AF016438-1|AAB65895.1| 406|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 133 protein.
Length = 406
Score = 31.1 bits (67), Expect = 0.68
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +3
Query: 243 AVTRRASSGDLYNRRYNTGPARRTSSVVSSGLTGNRCQYCRLKKCIAVGMS 395
A RRA+ L N +Y R+ + + G RC+ CRLKKC VGM+
Sbjct: 33 AFFRRAA---LQNAKYQDRVCRKGNCI---GNDLYRCKICRLKKCCEVGMN 77
>Z96048-6|CAE17841.1| 327|Caenorhabditis elegans Hypothetical
protein F57A10.6 protein.
Length = 327
Score = 30.7 bits (66), Expect = 0.90
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMS 395
+C+YCR +KCI GMS
Sbjct: 54 KCRYCRFQKCIQAGMS 69
>Z92817-6|CAB60324.1| 384|Caenorhabditis elegans Hypothetical
protein F57G8.6 protein.
Length = 384
Score = 30.7 bits (66), Expect = 0.90
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 327 SSGLTGNR-CQYCRLKKCIAVGMSRDAVRFGR 419
SS GNR C+ CRLK+C A GM+ + + R
Sbjct: 43 SSENCGNRFCKPCRLKRCFAAGMTIEHFQHNR 74
>Z83111-7|CAB05534.2| 384|Caenorhabditis elegans Hypothetical
protein F57G8.6 protein.
Length = 384
Score = 30.7 bits (66), Expect = 0.90
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 327 SSGLTGNR-CQYCRLKKCIAVGMSRDAVRFGR 419
SS GNR C+ CRLK+C A GM+ + + R
Sbjct: 43 SSENCGNRFCKPCRLKRCFAAGMTIEHFQHNR 74
>Z81463-1|CAB03850.1| 342|Caenorhabditis elegans Hypothetical
protein C06B8.1 protein.
Length = 342
Score = 30.7 bits (66), Expect = 0.90
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 336 LTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSS 476
L + C+ CR+ KC GM+ ++ GR KA + + +S+S
Sbjct: 46 LDSHPCRSCRILKCFEAGMTSKKIQSGRDKTSTKAISCISTESTSNS 92
>Z81132-15|CAE17969.1| 327|Caenorhabditis elegans Hypothetical
protein F57A10.6 protein.
Length = 327
Score = 30.7 bits (66), Expect = 0.90
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMS 395
+C+YCR +KCI GMS
Sbjct: 54 KCRYCRFQKCIQAGMS 69
>Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical
protein T26E4.8 protein.
Length = 315
Score = 30.7 bits (66), Expect = 0.90
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAV 407
CQ+CR +KCI VGM+ A+
Sbjct: 32 CQFCRFQKCIEVGMNIKAL 50
>U97008-4|AAB52312.1| 430|Caenorhabditis elegans Hypothetical
protein C03G6.12 protein.
Length = 430
Score = 30.7 bits (66), Expect = 0.90
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKA 440
++C+ CR ++C+ VGM+ A++ PK++ +
Sbjct: 116 SKCRACRFQRCLNVGMNPAAIQCDGNPKKDSS 147
>U46670-1|AAP46277.1| 445|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 1, isoform a protein.
Length = 445
Score = 30.7 bits (66), Expect = 0.90
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPK-REKARILAAMQQSSSSRAHEQAAAAELDD 515
C++CR KC+ VGM A++ + R++ ++ SS S + L D
Sbjct: 125 CRHCRFNKCLLVGMDAKALQIPAIQNDRDRIGPTKKIKMSSGSDDEQATTPHRLQD 180
>U41559-10|AAC24264.2| 371|Caenorhabditis elegans Hypothetical
protein C26B2.4 protein.
Length = 371
Score = 30.7 bits (66), Expect = 0.90
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 306 RRTSSVVSSGLTGNRCQYCRLKKCIAVGMS 395
R V+ G T N C+ CR KKC+ VGM+
Sbjct: 52 RGNMCVIQKG-TRNICRACRYKKCLQVGMN 80
>AY204196-1|AAO39199.1| 412|Caenorhabditis elegans nuclear receptor
NHR-110 protein.
Length = 412
Score = 30.7 bits (66), Expect = 0.90
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR 419
C+ CRL +C+++GMS + +++ R
Sbjct: 74 CKTCRLTRCLSIGMSPENIQYDR 96
>AY204166-1|AAO39170.1| 436|Caenorhabditis elegans nuclear receptor
NHR-1 protein.
Length = 436
Score = 30.7 bits (66), Expect = 0.90
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPK-REKARILAAMQQSSSSRAHEQAAAAELDD 515
C++CR KC+ VGM A++ + R++ ++ SS S + L D
Sbjct: 116 CRHCRFNKCLLVGMDAKALQIPAIQNDRDRIGPTKKIKMSSGSDDEQATTPHRLQD 171
>AY204165-1|AAO39169.1| 445|Caenorhabditis elegans nuclear receptor
NHR-1 protein.
Length = 445
Score = 30.7 bits (66), Expect = 0.90
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPK-REKARILAAMQQSSSSRAHEQAAAAELDD 515
C++CR KC+ VGM A++ + R++ ++ SS S + L D
Sbjct: 125 CRHCRFNKCLLVGMDAKALQIPAIQNDRDRIGPTKKIKMSSGSDDEQATTPHRLQD 180
>AC006777-1|ABB51174.1| 424|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 110, isoform b protein.
Length = 424
Score = 30.7 bits (66), Expect = 0.90
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR 419
C+ CRL +C+++GMS + +++ R
Sbjct: 86 CKTCRLTRCLSIGMSPENIQYDR 108
>Z81477-3|CAB03929.2| 316|Caenorhabditis elegans Hypothetical
protein C27C7.3 protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKA 440
C+ CR + C+ GM RD VR R + + A
Sbjct: 62 CRACRYESCVRAGMRRDNVRKHRTHQNQAA 91
>Z81116-12|CAB03309.1| 414|Caenorhabditis elegans Hypothetical
protein T06C12.13 protein.
Length = 414
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAVRFGR 419
+C+ CR KC+ +GM+ + V+F R
Sbjct: 78 QCRLCRYNKCVDLGMTPENVQFNR 101
>Z68119-2|CAA92192.1| 457|Caenorhabditis elegans Hypothetical
protein T18D3.2 protein.
Length = 457
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 243 AVTRRASSGDLYNRRYNTGPARRTSSVVSSGLTGNR--CQYCRLKKCIAVGMSRDAVRFG 416
A RR S D +RY +R ++ G TG R C+ CR+K+C+ +GM + V+
Sbjct: 353 AFFRRTISDD---KRYVCKRNQRCNNASRDG-TGYRKICRSCRMKRCLEIGMLPENVQHK 408
Query: 417 R 419
R
Sbjct: 409 R 409
>Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical
protein F11A1.3d protein.
Length = 719
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRD 401
CQ CRL+KC VGM ++
Sbjct: 136 CQKCRLRKCFTVGMKKE 152
>Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical
protein F11A1.3b protein.
Length = 694
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRD 401
CQ CRL+KC VGM ++
Sbjct: 111 CQKCRLRKCFTVGMKKE 127
>Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical
protein F11A1.3a protein.
Length = 753
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRD 401
CQ CRL+KC VGM ++
Sbjct: 170 CQKCRLRKCFTVGMKKE 186
>U97009-5|AAC69036.2| 505|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 220 protein.
Length = 505
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 324 VSSGLTGNRC--QYCRLKKCIAVGMSRDAVRFGR 419
++ G +GN C + CRLKKC GM + ++ R
Sbjct: 161 LAKGGSGNECLCKPCRLKKCFETGMDPSSFQYNR 194
>U61950-7|AAL02467.1| 395|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 46, isoform c protein.
Length = 395
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503
NRC+ CRL+ C+ GM+ VR R K E+ +++ +H +AA+
Sbjct: 16 NRCRACRLRNCLEGGMNPKHVREER-SKIERMPGNTCTVSAANGVSHSSSAAS 67
>U61950-6|AAC24291.1| 528|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 46, isoform a protein.
Length = 528
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503
NRC+ CRL+ C+ GM+ VR R K E+ +++ +H +AA+
Sbjct: 149 NRCRACRLRNCLEGGMNPKHVREER-SKIERMPGNTCTVSAANGVSHSSSAAS 200
>U61950-5|AAL02466.1| 576|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 46, isoform b protein.
Length = 576
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503
NRC+ CRL+ C+ GM+ VR R K E+ +++ +H +AA+
Sbjct: 197 NRCRACRLRNCLEGGMNPKHVREER-SKIERMPGNTCTVSAANGVSHSSSAAS 248
>U53154-3|AAC25852.1| 346|Caenorhabditis elegans Hypothetical
protein C33G8.8 protein.
Length = 346
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR 419
C++CR++KCIA GM+ V+ R
Sbjct: 52 CRHCRMEKCIATGMTMCKVQGNR 74
>U50313-4|AAA92328.1| 417|Caenorhabditis elegans Hypothetical
protein F44C4.2 protein.
Length = 417
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSR-AHEQAAAAELDDAPRL 527
C+ CRL KC A+GM+ + V+ P M+ S S + + A+ D +P
Sbjct: 60 CRQCRLTKCKAIGMNEEKVQLDYDPTYS---FRGLMEDSGSDEFSTPNGSPAQSDYSPTN 116
Query: 528 LAR 536
L+R
Sbjct: 117 LSR 119
>U50308-8|AAG24032.1| 562|Caenorhabditis elegans Hypothetical
protein F07C3.10 protein.
Length = 562
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGM 392
+C+YCRL+KC VGM
Sbjct: 91 KCRYCRLQKCYEVGM 105
>U16708-1|AAC46497.1| 457|Caenorhabditis elegans odr-7 protein.
Length = 457
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 243 AVTRRASSGDLYNRRYNTGPARRTSSVVSSGLTGNR--CQYCRLKKCIAVGMSRDAVRFG 416
A RR S D +RY +R ++ G TG R C+ CR+K+C+ +GM + V+
Sbjct: 353 AFFRRTISDD---KRYVCKRNQRCNNASRDG-TGYRKICRSCRMKRCLEIGMLPENVQHK 408
Query: 417 R 419
R
Sbjct: 409 R 409
>AF273791-1|AAG15139.1| 525|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 525
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503
NRC+ CRL+ C+ GM+ VR R K E+ +++ +H +AA+
Sbjct: 146 NRCRACRLRNCLEGGMNPKHVREER-SKIERMPGNTCTVSAANGVSHSSSAAS 197
>AF273790-1|AAG15138.1| 534|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 534
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503
NRC+ CRL+ C+ GM+ VR R K E+ +++ +H +AA+
Sbjct: 155 NRCRACRLRNCLEGGMNPKHVREER-SKIERMPGNTCTVSAANGVSHSSSAAS 206
>AF273787-1|AAG15135.1| 527|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 527
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAA 503
NRC+ CRL+ C+ GM+ VR R K E+ +++ +H +AA+
Sbjct: 148 NRCRACRLRNCLEGGMNPKHVREER-SKIERMPGNTCTVSAANGVSHSSSAAS 199
>AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2
protein.
Length = 694
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRD 401
CQ CRL+KC VGM ++
Sbjct: 111 CQKCRLRKCFTVGMKKE 127
>AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1
protein.
Length = 753
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRD 401
CQ CRL+KC VGM ++
Sbjct: 170 CQKCRLRKCFTVGMKKE 186
>AF083226-1|AAD03684.1| 560|Caenorhabditis elegans nuclear receptor
NHR-8 protein.
Length = 560
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRD 401
CQ CRL KC AVGM+ +
Sbjct: 78 CQACRLNKCFAVGMNSE 94
>AF036702-12|AAP31437.1| 559|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 8, isoform b protein.
Length = 559
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRD 401
CQ CRL KC AVGM+ +
Sbjct: 78 CQACRLNKCFAVGMNSE 94
>AF036702-11|AAP31436.1| 560|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 8, isoform a protein.
Length = 560
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRD 401
CQ CRL KC AVGM+ +
Sbjct: 78 CQACRLNKCFAVGMNSE 94
>AF024495-1|AAB70338.3| 399|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 125 protein.
Length = 399
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 333 GLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
G + N C+ CRLKKC +GM ++ R
Sbjct: 54 GCSRNFCKRCRLKKCREMGMDTTKFQYNR 82
>AF022983-3|AAB69942.2| 399|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 270 protein.
Length = 399
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAV 407
C++CR KKC VGM AV
Sbjct: 122 CRHCRFKKCFDVGMKASAV 140
>AC006674-1|AAK68390.1| 388|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 119 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 354 QYCRLKKCIAVGMSRDAVR 410
++CR KKCI VGM AVR
Sbjct: 95 RFCRFKKCIEVGMDPKAVR 113
>Z93389-2|CAB07671.2| 355|Caenorhabditis elegans Hypothetical
protein T13F3.3 protein.
Length = 355
Score = 29.9 bits (64), Expect = 1.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGR 419
C+YCR KC+ GM + ++ R
Sbjct: 66 CRYCRFSKCVKAGMKAEKIQKNR 88
>Z81116-6|CAB03299.1| 416|Caenorhabditis elegans Hypothetical
protein T06C12.7 protein.
Length = 416
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 330 SGLTGNRCQYCRLKKCIAVGMSRDAVRFGR 419
SG +C+ CRLKKC +GM+ + V+ R
Sbjct: 75 SGNDRYQCRACRLKKCKELGMTPENVQMDR 104
>Z68218-3|CAA92473.1| 325|Caenorhabditis elegans Hypothetical
protein K01H12.3 protein.
Length = 325
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 306 RRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK--ARILAAMQQSS 470
R+ S V G C++CR KC++ GM V+ R ++ + M QSS
Sbjct: 42 RQCSIVHDPTKRGGSCRFCRFLKCVSSGMMPQDVKAKRTSSSQQNVTSLYRNMNQSS 98
>U61947-14|ABA29341.1| 413|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 105, isoform b protein.
Length = 413
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAV 407
C+ CR +KC+ VGM+ DA+
Sbjct: 93 CRSCRYQKCLEVGMTEDAL 111
>U61947-13|AAB03131.3| 429|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 105, isoform a protein.
Length = 429
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAV 407
C+ CR +KC+ VGM+ DA+
Sbjct: 93 CRSCRYQKCLEVGMTEDAL 111
>AY305845-1|AAR11989.1| 412|Caenorhabditis elegans nuclear receptor
NHR-123 protein.
Length = 412
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVP 425
C+ CR+++C+ GM+ D +F R P
Sbjct: 77 CKKCRMQRCLQFGMTIDNFQFDREP 101
>AY204189-1|AAO39193.1| 429|Caenorhabditis elegans nuclear receptor
NHR-105 protein.
Length = 429
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAV 407
C+ CR +KC+ VGM+ DA+
Sbjct: 93 CRSCRYQKCLEVGMTEDAL 111
>AL132948-35|CAC51060.2| 887|Caenorhabditis elegans Hypothetical
protein Y39B6A.47 protein.
Length = 887
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +3
Query: 351 CQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPRLL 530
C+YCR +KC +GM + V P + + M + + +E A A A ++
Sbjct: 59 CRYCRFEKCKEIGMDAEKVILDYDPTASQK--VPVMPKIDKVQENEPAPATSKSHADKIT 116
Query: 531 ARV 539
++
Sbjct: 117 VKI 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,462,635
Number of Sequences: 27780
Number of extensions: 222603
Number of successful extensions: 1315
Number of sequences better than 10.0: 383
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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