Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0965
(629 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 135 3e-34
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 71 1e-14
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 46 4e-07
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 46 4e-07
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 33 0.003
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 31 0.007
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 1.9
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 9.9
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 135 bits (327), Expect = 3e-34
Identities = 64/75 (85%), Positives = 69/75 (92%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELDDAPR 524
NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSS SR+ E+A AAEL+D R
Sbjct: 118 NRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSHSRSQEKAVAAELEDEQR 177
Query: 525 LLARVVRAHLDTCEF 569
LLA VV+AHLDTC+F
Sbjct: 178 LLATVVQAHLDTCDF 192
Score = 67.7 bits (158), Expect = 9e-14
Identities = 31/35 (88%), Positives = 33/35 (94%), Gaps = 1/35 (2%)
Frame = +2
Query: 242 SCDP-QGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
SC+ +GFFRRSIQQKIQYRPCTKNQQCSILRINR
Sbjct: 83 SCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINR 117
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 70.5 bits (165), Expect = 1e-14
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +2
Query: 248 DPQGFFRRSIQQKIQYRPCTKNQQCSILRINR 343
D QGFFRRSIQQKIQYRPCTKNQQCSILRINR
Sbjct: 37 DSQGFFRRSIQQKIQYRPCTKNQQCSILRINR 68
Score = 47.2 bits (107), Expect = 1e-07
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 345 NRCQYCRLKKCIAVGMSRD 401
NRCQYCRLKKCIAVGMSRD
Sbjct: 69 NRCQYCRLKKCIAVGMSRD 87
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 45.6 bits (103), Expect = 4e-07
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +3
Query: 306 RRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473
R S + NRCQYCR +KC+A+GM R+AV+ R +R K R + ++ +SS
Sbjct: 147 REEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEER--QRTKERDQSEVESTSS 200
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 45.6 bits (103), Expect = 4e-07
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +3
Query: 306 RRTSSVVSSGLTGNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSS 473
R S + NRCQYCR +KC+A+GM R+AV+ R +R K R + ++ +SS
Sbjct: 147 REEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEER--QRTKERDQSEVESTSS 200
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 32.7 bits (71), Expect = 0.003
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGMSRDAV 407
+CQ CRLKKC+ VGM + V
Sbjct: 238 KCQECRLKKCLTVGMRPECV 257
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSI 328
+GFFRRSI + Y+ C C I
Sbjct: 208 KGFFRRSITKNAVYQ-CKYGNNCEI 231
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 31.5 bits (68), Expect = 0.007
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 348 RCQYCRLKKCIAVGM 392
+CQ CRLKKC+ VGM
Sbjct: 35 KCQECRLKKCLTVGM 49
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 254 QGFFRRSIQQKIQYRPCTKNQQCSI 328
+GFFRRSI + Y+ C C I
Sbjct: 5 KGFFRRSITKNAVYQ-CKYGNNCEI 28
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 36 TALKDVISSEESGGVSDECSEW 101
T ++VIS ESG + E S W
Sbjct: 1656 TQQRNVISDSESGRLDTEMSTW 1677
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3
Query: 396 CSFRRRCIFSVGNT 355
C+F+ C+FS NT
Sbjct: 143 CNFKAYCLFSFLNT 156
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,588
Number of Sequences: 438
Number of extensions: 2674
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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