Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0964
(638 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 27 0.17
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 27 0.17
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 26 0.30
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 26 0.30
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 23 1.6
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 23 2.1
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 23 2.1
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 23 2.8
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 21 6.6
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 21 8.7
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 21 8.7
AM712905-1|CAN84644.1| 102|Tribolium castaneum hypothetical pro... 21 8.7
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 26.6 bits (56), Expect = 0.17
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 452 HHDNSRGSPPPNCAICLGTCKNKSFTDS 535
H N GS P C C TC NKS +S
Sbjct: 249 HLRNHAGSKPFQCNKCDYTCVNKSMLNS 276
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 26.6 bits (56), Expect = 0.17
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 452 HHDNSRGSPPPNCAICLGTCKNKSFTDS 535
H N GS P C C TC NKS +S
Sbjct: 7 HLRNHAGSKPFQCNKCDYTCVNKSMLNS 34
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 25.8 bits (54), Expect = 0.30
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 390 CGIVAMIAYRDISNGFTTSCVS 325
CGI+ ++A IS G+ SCVS
Sbjct: 530 CGIMILVANVAISFGYLISCVS 551
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 25.8 bits (54), Expect = 0.30
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 390 CGIVAMIAYRDISNGFTTSCVS 325
CGI+ ++A IS G+ SCVS
Sbjct: 530 CGIMILVANVAISFGYLISCVS 551
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 23.4 bits (48), Expect = 1.6
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 443 SSPHHDNSRGSPPPNCAI 496
++PHH N PP+C++
Sbjct: 348 AAPHHQNFGPRHPPDCSM 365
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 23.0 bits (47), Expect = 2.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 337 IMCLKSSTLSIYLPIVIFPVASPHHVSQIFNVIVTIGT*QISL*C 203
IMCL ++ +PIVIF + + IF V +++ + L C
Sbjct: 78 IMCL-GVIGNVMVPIVIFKTKDMRNSTNIFLVNLSVADLMVLLVC 121
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 23.0 bits (47), Expect = 2.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 337 IMCLKSSTLSIYLPIVIFPVASPHHVSQIFNVIVTIGT*QISL*C 203
IMCL ++ +PIVIF + + IF V +++ + L C
Sbjct: 78 IMCL-GVIGNVMVPIVIFKTKDMRNSTNIFLVNLSVADLMVLLVC 121
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 127 ICVTTWFLA*YVKCPDLVEIHY 192
IC+ WF+A P LV Y
Sbjct: 190 ICLLAWFIAALFTSPMLVIAEY 211
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 22.6 bits (46), Expect = 2.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 7 IWCSQNPFK 33
+WCSQNP K
Sbjct: 573 LWCSQNPGK 581
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 97 VTRTHMNGHKICVTTW 144
VTRT N K+ V TW
Sbjct: 295 VTRTGANIKKLIVNTW 310
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 21.0 bits (42), Expect = 8.7
Identities = 5/7 (71%), Positives = 7/7 (100%)
Frame = +1
Query: 7 IWCSQNP 27
+WC+QNP
Sbjct: 620 VWCAQNP 626
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 21.0 bits (42), Expect = 8.7
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
Frame = +2
Query: 425 SIKSDDSSPHHDNSRGSPPPNCAICLGTCKNK------SFTDS-CLHQFCFN 559
+I +DD SP+ + GS A CKN S DS C H C N
Sbjct: 104 NINTDDCSPNPCRNNGSCVDRIADFECNCKNGWKGKTCSLKDSHCDHTTCKN 155
>AM712905-1|CAN84644.1| 102|Tribolium castaneum hypothetical
protein protein.
Length = 102
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -3
Query: 102 SYGNERIKY*GKLSSLL 52
S+ RI+Y G++SSL+
Sbjct: 42 SFYRSRIRYQGRISSLI 58
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,343
Number of Sequences: 336
Number of extensions: 3650
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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