SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0964
         (638 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)              43   2e-04
SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.)               43   2e-04
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)              39   0.004
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.005
SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10)              38   0.007
SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.009
SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)                 37   0.016
SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)              37   0.016
SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)                37   0.016
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)              35   0.064
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)              35   0.064
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)                   34   0.085
SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.)                34   0.085
SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)              34   0.11 
SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)              34   0.11 
SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.11 
SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)               34   0.11 
SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)              33   0.20 
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)            33   0.20 
SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)                33   0.20 
SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12)              32   0.34 
SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.45 
SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.45 
SB_4080| Best HMM Match : zf-C3HC4 (HMM E-Value=0.23)                  31   0.60 
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)                31   0.79 
SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08)              31   0.79 
SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.0  
SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034)               31   1.0  
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)                31   1.0  
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)                31   1.0  
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_19621| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   1.8  
SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.4  
SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035)               29   2.4  
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)              29   2.4  
SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)               29   2.4  
SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05)              29   3.2  
SB_20928| Best HMM Match : NHL (HMM E-Value=0)                         29   3.2  
SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.2  
SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.2  
SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)              29   3.2  
SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)              29   3.2  
SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.2  
SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09)                29   3.2  
SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25)               29   3.2  
SB_42097| Best HMM Match : DUF1605 (HMM E-Value=3e-15)                 29   4.2  
SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)                 29   4.2  
SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05)              29   4.2  
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_52986| Best HMM Match : zf-C2H2 (HMM E-Value=0.0042)                28   5.6  
SB_41743| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.6  
SB_27224| Best HMM Match : RNase_P_p30 (HMM E-Value=5.9)               28   5.6  
SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09)                     28   5.6  
SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.4  
SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1)            28   7.4  
SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.4  
SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.4  
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)                28   7.4  
SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019)               28   7.4  
SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061)                28   7.4  
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)                 28   7.4  
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)                    28   7.4  
SB_31765| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.7  
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)                27   9.7  
SB_27793| Best HMM Match : Alpha_GJ (HMM E-Value=7.6)                  27   9.7  
SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.7  
SB_4752| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   9.7  
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)                27   9.7  
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)                27   9.7  
SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022)               27   9.7  
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)                27   9.7  
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.7  
SB_9920| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   9.7  

>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1716

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 488  CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604
            C +C G   + +    CLH FC +C+V+W +    CP+C
Sbjct: 1366 CVLCGGYLVDATTIVECLHSFCRSCIVSWLQASYHCPVC 1404


>SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 574

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = +2

Query: 395 LDDISEANPSSIKSDDSSPHHDNSRGSPPPNCAICLGTCKNKSF--TDSCLHQFCFNCLV 568
           +DD+   +      D +   +D++  S    C +CL +   +     +SC+H FC  C++
Sbjct: 71  VDDVGSDDDDDEVPDVNISDNDDATMSNSAQCPVCLMSLSEQKLGTPNSCMHVFCLECIL 130

Query: 569 TWSKVKAE 592
            WSK+  E
Sbjct: 131 EWSKIPVE 138


>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
          Length = 346

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTW-SKVKAE-CPLC 604
           C IC+G  +N + T  C H FC +CL TW S+ + + CP C
Sbjct: 18  CNICVGVLEN-AITTICGHSFCESCLETWLSRPEVQSCPSC 57


>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 337

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPL-CSKI 613
           C IC G  ++   T +C H FC  CLV W      CPL C ++
Sbjct: 57  CGICFGVLEDPLVT-TCGHVFCSQCLVHWIAENGTCPLTCEQL 98


>SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10)
          Length = 169

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 473 SPPPNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAE--CPLCSKILNQ 622
           +P   C +C G     +    CLH FC +C+VT+ +   +  CP C+ ++++
Sbjct: 59  NPFITCGLCEGYLIKPTTITECLHTFCKSCIVTYLQDSEDNTCPSCNTVIHE 110


>SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 254

 Score = 37.5 bits (83), Expect = 0.009
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
 Frame = +2

Query: 392 SLDDISEANPSSIKSDDSSPHH---DNSRGSPPPNCAICLGTCKNKSFTDSCLHQFCFNC 562
           ++ D S    SS  S+ ++ H+   D +  +    C ICL T ++ +    C H FC+ C
Sbjct: 28  NMADTSVGAASSSSSEPTASHNPSEDPNSANANFECNICLDTARD-AVISMCGHLFCWPC 86

Query: 563 LVTWSKV---KAECPLC 604
           L  W +    ++ CP+C
Sbjct: 87  LHRWLETRPNRSMCPVC 103


>SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)
          Length = 321

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
 Frame = +2

Query: 431 KSDDSSPHH----DNSRGSPPPNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECP 598
           K D + PH      ++  + P  C +C  T KN   T  CLH FC  C +   K  ++C 
Sbjct: 222 KPDSADPHQYEIDSDNEDNLPFACIMCRKTFKNPVVT-KCLHYFCEACALQHYKKNSKCF 280

Query: 599 LC 604
           +C
Sbjct: 281 VC 282


>SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
          Length = 291

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604
           C +C G   + +    CLH FC  C+V + +    CP+C
Sbjct: 48  CVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYRCPVC 86


>SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
          Length = 510

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604
           C +C G   + +    CLH FC  C+V + +    CP+C
Sbjct: 16  CVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYRCPVC 54


>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
          Length = 858

 Score = 34.7 bits (76), Expect = 0.064
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604
           C ICL T         C H FC  C+   SK    CP C
Sbjct: 678 CPICLETITYPETLQGCGHTFCRPCITEASKSSKLCPTC 716


>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
          Length = 911

 Score = 34.7 bits (76), Expect = 0.064
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604
           C ICL T         C H FC  C+   SK    CP C
Sbjct: 753 CPICLETITYPETLQGCGHTFCRPCITEASKSSKLCPTC 791


>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
          Length = 553

 Score = 34.3 bits (75), Expect = 0.085
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 518 KSFTDSCLHQFCFNCLVTWSKVKAECPLC 604
           ++ T +C H FC  CL +W + +  CP+C
Sbjct: 380 RATTLTCSHSFCEYCLQSWLRKRNTCPIC 408


>SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 362

 Score = 34.3 bits (75), Expect = 0.085
 Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 15/63 (23%)
 Frame = +2

Query: 461 NSRGSPPPNCAICLGTCKNK--------SFTDSCLHQFCFNCLVTW-------SKVKAEC 595
           N  GS    CA+CL    +K            +C+H FC  C+  W        KV   C
Sbjct: 165 NVNGSENVTCAVCLDVVMSKPKQSERRFGILPNCIHAFCLECIRKWRKASHAEKKVVRAC 224

Query: 596 PLC 604
           P+C
Sbjct: 225 PIC 227


>SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
          Length = 158

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 497 CLGTCKNKSFTDSCLHQFCFNCLVT-WSKVKAECPLCS 607
           C  T K  +    C H FC+ CL T +   + +CP C+
Sbjct: 108 CCNTRKKDAILTKCFHVFCYECLKTRYDTRQRKCPKCN 145


>SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
          Length = 406

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 497 CLGTCKNKSFTDSCLHQFCFNCLVT-WSKVKAECPLCS 607
           C  T K  +    C H FC+ CL T +   + +CP C+
Sbjct: 356 CCNTRKKDAILTKCFHVFCYECLKTRYDTRQRKCPKCN 393


>SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 362

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-TWSKVKAE----CPLCSKIL 616
           C ICL   K+      CLH FC+ CLV   S+ K E    CP C  ++
Sbjct: 16  CPICLERFKDPRVLP-CLHTFCYECLVGLASRYKTEGKWPCPQCKMVV 62


>SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)
          Length = 203

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-TWSKVKAE----CPLCSKIL 616
           C ICL   K+      CLH FC+ CLV   S+ K E    CP C  ++
Sbjct: 16  CPICLERFKDPRVLP-CLHTFCYECLVGLASRYKTEGKWPCPQCKMVV 62


>SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)
          Length = 207

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAE---CPLCSK 610
           C++C     +     +CLH FC  CL      +++   CPLC K
Sbjct: 68  CSVCYEVFSDPRTLTACLHSFCKECLHKMLSKRSKYIHCPLCRK 111


>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
          Length = 380

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL---VTWSKVKAECPLCSKILNQ 622
           C ICL    + S T  C H FC  CL   +    +   CP+C   +NQ
Sbjct: 65  CPICLDPLDDPSIT-RCAHVFCTGCLTDVIENEGLAPRCPMCRAPVNQ 111


>SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)
          Length = 398

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +2

Query: 485 NCAICLGTCKNKSFTDS--CLHQFCFNCLVTWSKVKAECPLCSK 610
           +C ICL     ++ T    C H++C  CL  W +    CP+C K
Sbjct: 261 SCPICLEEFTPETPTRLLVCGHKYCEPCLSRWLENNTTCPICRK 304


>SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12)
          Length = 558

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
 Frame = +2

Query: 482 PNCAICLGTCKNKSFTD--SCLHQFCFNCLVTWSKVKAECPLC 604
           P C ICL   KN        C H+F   C+  W      CPLC
Sbjct: 212 PKCVICLEGFKNGQDLRIVPCRHEFHKECVDPWLLSNFTCPLC 254


>SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 514

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = +2

Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNC---LVTWSKVKAECPLC 604
           NC++C    +       CLH FC  C   LVT + V   CP C
Sbjct: 19  NCSLCHRLIRGPKLLP-CLHSFCLACLEDLVTENDVGFNCPQC 60


>SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 139

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +2

Query: 485 NCAICLGTCKNKSFTDS--CLHQFCFNCLVTWSKVKAECPLC 604
           +C ICLG  +    T    C H F   C++ W +    CP+C
Sbjct: 61  SCPICLGDYEKGESTKQMPCDHLFHPGCILPWLEKTNSCPVC 102


>SB_4080| Best HMM Match : zf-C3HC4 (HMM E-Value=0.23)
          Length = 203

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
 Frame = +2

Query: 395 LDDISEANPSSIKSDDSSPHHDNSRGSPPPNCAICLGTCKNKSFTDS---CLHQFCFNCL 565
           L D S+      ++DD S     +     P C     T  + SF+ S   C+H FC +C 
Sbjct: 35  LSDDSKDGTELAQTDDGSRAGKRAH----PECYDVNVTLMSDSFSISLQPCMHSFCASCY 90

Query: 566 VTWSKVKAECP 598
             W +   +CP
Sbjct: 91  SQWMEHSRDCP 101


>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
          Length = 471

 Score = 31.1 bits (67), Expect = 0.79
 Identities = 16/68 (23%), Positives = 27/68 (39%)
 Frame = +2

Query: 401 DISEANPSSIKSDDSSPHHDNSRGSPPPNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSK 580
           D ++    ++++ D      N+       C +C      +  T  C H FC +CL     
Sbjct: 301 DCNDLFSENLENGDIRSPASNTEQLDDFECKLCFNLLL-EPVTSLCGHSFCRDCLYRSLD 359

Query: 581 VKAECPLC 604
            + ECP C
Sbjct: 360 HRVECPCC 367


>SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08)
          Length = 688

 Score = 31.1 bits (67), Expect = 0.79
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
 Frame = +2

Query: 488 CAIC--LGTCKNKSFTD----SCLHQFCFNCLVTWSKVKAECPLC 604
           C +C  + TC+ K        +C H FC +C+  W   +  CP+C
Sbjct: 477 CKVCFVMPTCQVKLAKQIMLRTCKHIFCEDCISLWFDREQTCPMC 521


>SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 649

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL-----VTWSKVKAECPLC 604
           C +CLG  KN      C H FC  C+      +  K   +CP C
Sbjct: 20  CPVCLGEYKNPMLL-RCYHSFCLRCVQELLHQSGEKGVVKCPQC 62


>SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034)
          Length = 671

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +2

Query: 542 HQFCFNCLVTWSKVKAECPLCSKILNQ 622
           H FC  CL  W +    CP C   +NQ
Sbjct: 120 HVFCSPCLDLWLRTNRYCPTCRTPINQ 146


>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
          Length = 470

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDS----CLHQFCFNCLVTWS----KVKAECPLC 604
           CAIC+     + FTD     CLH FC +CL   +    K K  CPLC
Sbjct: 15  CAICI-----EHFTDPRLLPCLHTFCRHCLEDLAEHSGKGKLVCPLC 56


>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
          Length = 306

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAE 592
           C IC    +    T  C H FC  CL TW   K E
Sbjct: 18  CGICAEVLERAVLTP-CGHSFCGVCLETWMNAKLE 51


>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1459

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
 Frame = +2

Query: 485  NCAICLGTCKNKSFTDSCLHQFCFNC----LVTWSKVKAECPLCSK 610
            NC +C G     +  D+C   F   C    LV   +V   CP C K
Sbjct: 1195 NCCVCGGPAGKMAKCDNCPRNFHLKCLEPPLVKMPRVSWTCPKCKK 1240


>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1829

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAEC 595
           C++CLG  ++     +CLH +C +CL +  +   EC
Sbjct: 17  CSLCLGQYQDPRVL-ACLHTYCRHCLESLVEHSKEC 51


>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 887

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL---VTWSKVKAECPLC 604
           C IC  T  N      CLH FC NCL   +   +    CP C
Sbjct: 17  CGICQETYNNPKVLP-CLHSFCQNCLDKSIRSQERVLVCPTC 57


>SB_19621| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 730

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 6/38 (15%)
 Frame = +2

Query: 509 CKNKSFTDSCLHQFCFNCLVTWSK------VKAECPLC 604
           C+ +  T  CLH +C  C+  W K      + + CP C
Sbjct: 282 CRERPKTLPCLHHYCAKCIDPWIKTCSDQGINSTCPEC 319


>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 549

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL--VTWSKVK-AECPLCSK 610
           C +CL   K      SC H  C  CL  +T++  K   CP C +
Sbjct: 17  CPVCLEELKEPKCLTSCAHNVCKPCLDRMTFNGEKEIRCPTCRR 60


>SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 288

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
 Frame = +2

Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKA-----ECPLCSK 610
           NC  C          D CLH FC  CL T   + A      CPLC K
Sbjct: 15  NCRACHKVFTEPKILD-CLHTFCQKCLGTHDILGAGTNSIVCPLCRK 60


>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 937

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKA----ECPLC 604
           C ICL   K    T SC+H  C  CL   +  ++     CPLC
Sbjct: 21  CPICLDEFKEPK-TLSCMHDLCRKCLEDMAARESSRVIRCPLC 62


>SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 305

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILN 619
           +C +C G   +   + SCLH  C  CL    K +A  P C   LN
Sbjct: 40  SCRVCRGLVVDPFGSQSCLHYVCRGCL---RKKRALNPGCRWCLN 81


>SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035)
          Length = 351

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILN 619
           +C +C G   +   + SCLH  C  CL    K +A  P C   LN
Sbjct: 40  SCRVCRGLVVDPFGSQSCLHYVCRGCL---RKKRALNPGCRWCLN 81


>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
          Length = 301

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
 Frame = +2

Query: 473 SPPPN--CAICLGTCKNKSFTDSCLHQFCFNCLVTW---SKVKAECPLC 604
           SPP    CAIC         T  C H FC  C+  W   +  K+ CP+C
Sbjct: 153 SPPDFVFCAICKEVLTQPIATP-CDHYFCVLCICEWLDQTYNKSGCPVC 200


>SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)
          Length = 1631

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
 Frame = +2

Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAE---CPLC 604
           +C +CL   +      SC H  C  CL   +K       CP+C
Sbjct: 22  SCPVCLEVFEEPLVLPSCGHSVCLQCLQNMTKRNPPSLLCPVC 64


>SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05)
          Length = 406

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKA----ECPLC 604
           C +C+          SC H  C  CL   +K  +    ECP+C
Sbjct: 22  CPVCIEVFVEPKSLPSCAHNVCRECLEKITKRNSIRFVECPIC 64


>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
          Length = 795

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 476 PPPNCAICLGTCKNKSFTDSCLHQFCFNCL 565
           PP  C  C+   +N      CLH FC  CL
Sbjct: 11  PPEVCPKCMNAYENPKVLP-CLHTFCSQCL 39


>SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 466

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTW---SKVKAECPLC 604
           CAIC         T  C H FC  C+  W   +  K+ CP+C
Sbjct: 160 CAICKEVLTQPIATP-CDHYFCVLCICEWLDQTYNKSGCPVC 200


>SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1257

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = +2

Query: 473  SPPPNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPL 601
            S P  C +C     N +   +C + FC+ C+  +      CP+
Sbjct: 1196 SHPAQCPLCAKVRTNPTALSTCGYVFCYPCIYRYLGQHGCCPV 1238


>SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
          Length = 262

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTW---SKVKAECPLC 604
           CAIC         T  C H FC  C+  W   +  K+ CP+C
Sbjct: 34  CAICKEVLTQPIATP-CDHYFCVLCICEWLDQTYNKSGCPVC 74


>SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
          Length = 301

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTW---SKVKAECPLC 604
           CAIC         T  C H FC  C+  W   +  K+ CP+C
Sbjct: 160 CAICKEVLTQPIATP-CDHYFCVLCICEWLDQTYNKSGCPVC 200


>SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1022

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 7/44 (15%)
 Frame = +2

Query: 494 ICLGTCKNKSFTDS----CLHQFCFNC---LVTWSKVKAECPLC 604
           IC G C+ +++TD     CLH FC  C   LVT  + K  CP C
Sbjct: 404 IC-GVCR-ETYTDPRVAPCLHSFCKECVTKLVTERQGKFVCPDC 445


>SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09)
          Length = 474

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSK 610
           C  C    K+      CLH  C  CL        +CP+CS+
Sbjct: 19  CPACSNVIKDPRILP-CLHSICKTCLEKQLNGCLKCPVCSE 58


>SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25)
          Length = 662

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 5/29 (17%)
 Frame = +2

Query: 494 ICLGTCKNKSFTDS-----CLHQFCFNCL 565
           IC G C+  S T +     CLH FCF CL
Sbjct: 21  IC-GICRKSSATSNPKLLPCLHSFCFGCL 48


>SB_42097| Best HMM Match : DUF1605 (HMM E-Value=3e-15)
          Length = 889

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 395 LDDISEANPSSIKSDDSSPHHDNSRGSPPPNC 490
           LD     +PS   +     +H NS G+PPP+C
Sbjct: 424 LDPDPTLHPSIFAARSVILYHHNSNGNPPPSC 455


>SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 767

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKI 613
           C+ C G  KN      CLH FC +CL    K +    LC ++
Sbjct: 18  CSACKGFYKNPKRLP-CLHAFCCHCL---KKTQRGTKLCERM 55


>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
          Length = 654

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/45 (33%), Positives = 18/45 (40%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILNQ 622
           C +C     N   T  C H FC  CL      +  CP+C   L Q
Sbjct: 379 CTLCCRLFYNP-VTTPCGHVFCRACLNRSLDHRPGCPICRSSLTQ 422


>SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05)
          Length = 576

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL--VTW--SKVKAECPLC 604
           C +C+   +      SC H  C  CL  +T   S    ECP+C
Sbjct: 22  CPVCIEVFEEPKSLPSCAHNVCRECLEKITARNSSRFVECPIC 64


>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1555

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +2

Query: 473 SPPPN---CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCS 607
           SPP +   CAIC    K+   T SC H +C  C+  W     E  L S
Sbjct: 22  SPPSDDSMCAICHIVVKDPILT-SCGHSYCKCCIQKWRNRMEEFTLQS 68


>SB_52986| Best HMM Match : zf-C2H2 (HMM E-Value=0.0042)
          Length = 623

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = +2

Query: 494 ICLGTCKNKSFT--DSCLHQFCFNCLVTWSKVKAE--CPLCSKILNQ*FI 631
           +C+  C+   F+    C H  C+ C V    +K E  C +C   L+  FI
Sbjct: 13  LCVVCCEEIEFSAVGKCDHPVCYKCCVRMRVLKQENYCTVCRSELSMIFI 62


>SB_41743| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1436

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 371  IMATIPQSLDDISEANPSSIKSDDSSP 451
            I+  IP++ DDI +  PS   ++DS+P
Sbjct: 1222 ILGDIPKTDDDIRDGEPSDSATEDSAP 1248


>SB_27224| Best HMM Match : RNase_P_p30 (HMM E-Value=5.9)
          Length = 489

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +3

Query: 360 HDRQSWRLYHNLWMISLKQTQAA*RVMIAVHIMTTAEGRHLLTVQYV 500
           H  Q     H L ++++++      V   +H++T  +G HLLTV+ +
Sbjct: 69  HGAQRLTFTHGLHLLTVRKGLHLLTVHKGLHLLTVRKGLHLLTVRKI 115


>SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09)
          Length = 589

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
 Frame = +2

Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCL---VTWSKVK-AECPLCSK 610
           +C +CL          +C H  C  CL    T S+ K   CP+C K
Sbjct: 22  SCPVCLEDFLEPKSLPNCAHNVCRKCLEGMATDSESKEIRCPVCRK 67


>SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2070

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/76 (18%), Positives = 40/76 (52%)
 Frame = -2

Query: 463 VVMMWTAIITLYAAWVCFRDIIQRLWYSRHDCLS*YFQWLHHIMCLKSSTLSIYLPIVIF 284
           V+M++  I+  +   V    ++  +  + H  +  +   ++H++ +    + +YL I+++
Sbjct: 89  VIMVYHVIMVYHVIMVYHVIMVYHVIMTYHVIMVYHVIMVYHVIMVYH-VIMVYLVIMVY 147

Query: 283 PVASPHHVSQIFNVIV 236
            V   +HV  +++VI+
Sbjct: 148 HVIMVYHVIMVYHVIM 163



 Score = 27.5 bits (58), Expect = 9.7
 Identities = 14/76 (18%), Positives = 39/76 (51%)
 Frame = -2

Query: 463 VVMMWTAIITLYAAWVCFRDIIQRLWYSRHDCLS*YFQWLHHIMCLKSSTLSIYLPIVIF 284
           V+M++  I+  +   V    ++  +    H  +  +   ++H++ +    + +YL I+++
Sbjct: 29  VIMVYLVIMVYHVVMVYHVIMVYHVIMVYHVIMVYHVIMVYHVIMVYH-VIMVYLVIMVY 87

Query: 283 PVASPHHVSQIFNVIV 236
            V   +HV  +++VI+
Sbjct: 88  HVIMVYHVIMVYHVIM 103


>SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1)
          Length = 284

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
 Frame = +3

Query: 321 DLRHMMW*SHWKYHDRQSWRLYHNLWMI-SLKQTQAA*RVMIAVHIMTTAEGRHLLTVQY 497
           D  H  + SH+ Y    + R+ + L    +  +TQ   R+    HI  T   RH L   +
Sbjct: 94  DTTHTKYPSHYTYRIPYTLRIPNTLHTTHTAYRTQCTYRIPYRYHIRYTLHVRHTLRTTH 153

Query: 498 V*EHVKTNHSLILAC-TNFVSTVL*LGVR*KQNVHYA 605
                 T H+   AC T++         R     HYA
Sbjct: 154 TTYATHTVHTRHTACPTHYTYATHYAEQRPHDPTHYA 190


>SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1094

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/45 (31%), Positives = 18/45 (40%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILNQ 622
           C+ C     +   T  C H  C  C    SK    CPLC K + +
Sbjct: 18  CSYCRKVYLHPLVT-GCGHVLCTKCYNKRSKKHLGCPLCGKSMGE 61


>SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 632

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL 565
           C  C    KN   T  CLH FC  CL
Sbjct: 16  CRQCSNVFKNPRITP-CLHSFCAECL 40


>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
          Length = 629

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604
           C++C+    +      CLH FC +CL      +  K K  CPLC
Sbjct: 135 CSLCIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGKGKLVCPLC 177


>SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019)
          Length = 413

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAE-----CPLCSK 610
           C IC    +       C H  C +CL    K+K E     CP+C K
Sbjct: 22  CPICTEIFETPKCLPVCAHNVCLSCL---KKMKIEQGFIKCPICRK 64


>SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061)
          Length = 63

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKI 613
           C IC+        + SC H  C  C +     K  CP C+ I
Sbjct: 11  CLICMEPYTVPLVSISCWHVHCEECWLRTLGAKKLCPQCNMI 52


>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
          Length = 316

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604
           C+IC+    +      CLH FC +CL      +  + K  CPLC
Sbjct: 15  CSICIEHLNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57


>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
          Length = 320

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +2

Query: 482 PNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604
           P+C +CL    +      C H FCF C+   +    +C +C
Sbjct: 69  PDCPVCLQQA-SYPVRLPCGHMFCFLCIKGVALRSRKCAIC 108


>SB_31765| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 241

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILN 619
           C IC     +K       H  C  CL     V + CP+C  IL+
Sbjct: 112 CPIC-SELLDKPVETIFTHNACGACLTQALAVNSSCPVCKTILS 154


>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
          Length = 119

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604
           C+IC+    +      CLH FC +CL      +  + K  CPLC
Sbjct: 15  CSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57


>SB_27793| Best HMM Match : Alpha_GJ (HMM E-Value=7.6)
          Length = 165

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 193 NNVFQLNQDI*HIMLKTTLLHIFYVHSYVYELR 95
           +   QLN D+  I++KTTLL       +V  LR
Sbjct: 106 DTAIQLNNDVLEIIIKTTLLSFEIYEMFVNSLR 138


>SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 387

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
 Frame = +2

Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCLV----TWSKVKAECPLCSKIL 616
           +C IC    +       C H  C  CL+         + ECP+C  I+
Sbjct: 24  SCPICYEDFEEPKCLPKCAHNICRECLLGIIEKAQLERFECPICRAIV 71


>SB_4752| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 430

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = -2

Query: 463 VVMMWTAIIT--LYAAWVCFRDIIQRLWYSRHDC 368
           +V +W A++   + A   CF+ + +RLW+ ++ C
Sbjct: 383 LVSLWNAVLAFKVEAKQRCFKFLYERLWFKQNIC 416


>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
          Length = 62

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604
           C+IC+    +      CLH FC +CL      +  + K  CPLC
Sbjct: 15  CSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57


>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
          Length = 62

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604
           C+IC+    +      CLH FC +CL      +  + K  CPLC
Sbjct: 15  CSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57


>SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022)
          Length = 229

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILN 619
           C IC     +K       H  C  CL     V + CP+C  IL+
Sbjct: 133 CPIC-SELLDKPVETIFTHNACGACLTQALAVNSSCPVCKTILS 175


>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
          Length = 463

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604
           C+IC+    +      CLH FC +CL      +  + K  CPLC
Sbjct: 15  CSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57


>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 888

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = +2

Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604
           C+IC+    +      CLH FC +CL      +  + K  CPLC
Sbjct: 14  CSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 56


>SB_9920| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 601

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = -2

Query: 463 VVMMWTAIIT--LYAAWVCFRDIIQRLWYSRHDC 368
           +V +W A++   + A   CF+ + +RLW+ ++ C
Sbjct: 385 LVSLWNAVLAFKVEAKQRCFKFLYERLWFKQNIC 418


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,370,060
Number of Sequences: 59808
Number of extensions: 436167
Number of successful extensions: 1265
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -