BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0964 (638 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04 SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04 SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 39 0.004 SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005 SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10) 38 0.007 SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009 SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09) 37 0.016 SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 37 0.016 SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 37 0.016 SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 35 0.064 SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 35 0.064 SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 34 0.085 SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.085 SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 34 0.11 SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 34 0.11 SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11 SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12) 34 0.11 SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09) 33 0.20 SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) 33 0.20 SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18) 33 0.20 SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12) 32 0.34 SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45 SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45 SB_4080| Best HMM Match : zf-C3HC4 (HMM E-Value=0.23) 31 0.60 SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 31 0.79 SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08) 31 0.79 SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0 SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034) 31 1.0 SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 31 1.0 SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 31 1.0 SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4 SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4 SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4 SB_19621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4 SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4 SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8 SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8 SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4 SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035) 29 2.4 SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 29 2.4 SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) 29 2.4 SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05) 29 3.2 SB_20928| Best HMM Match : NHL (HMM E-Value=0) 29 3.2 SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2 SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2 SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 29 3.2 SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 29 3.2 SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2 SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09) 29 3.2 SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25) 29 3.2 SB_42097| Best HMM Match : DUF1605 (HMM E-Value=3e-15) 29 4.2 SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2 SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 29 4.2 SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05) 29 4.2 SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2 SB_52986| Best HMM Match : zf-C2H2 (HMM E-Value=0.0042) 28 5.6 SB_41743| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6 SB_27224| Best HMM Match : RNase_P_p30 (HMM E-Value=5.9) 28 5.6 SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09) 28 5.6 SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4 SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1) 28 7.4 SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4 SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4 SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) 28 7.4 SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019) 28 7.4 SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061) 28 7.4 SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) 28 7.4 SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 28 7.4 SB_31765| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7 SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 27 9.7 SB_27793| Best HMM Match : Alpha_GJ (HMM E-Value=7.6) 27 9.7 SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7 SB_4752| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7 SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 27 9.7 SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 27 9.7 SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022) 27 9.7 SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 27 9.7 SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7 SB_9920| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7 >SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1716 Score = 42.7 bits (96), Expect = 2e-04 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604 C +C G + + CLH FC +C+V+W + CP+C Sbjct: 1366 CVLCGGYLVDATTIVECLHSFCRSCIVSWLQASYHCPVC 1404 >SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 574 Score = 42.7 bits (96), Expect = 2e-04 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Frame = +2 Query: 395 LDDISEANPSSIKSDDSSPHHDNSRGSPPPNCAICLGTCKNKSF--TDSCLHQFCFNCLV 568 +DD+ + D + +D++ S C +CL + + +SC+H FC C++ Sbjct: 71 VDDVGSDDDDDEVPDVNISDNDDATMSNSAQCPVCLMSLSEQKLGTPNSCMHVFCLECIL 130 Query: 569 TWSKVKAE 592 WSK+ E Sbjct: 131 EWSKIPVE 138 >SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) Length = 346 Score = 38.7 bits (86), Expect = 0.004 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTW-SKVKAE-CPLC 604 C IC+G +N + T C H FC +CL TW S+ + + CP C Sbjct: 18 CNICVGVLEN-AITTICGHSFCESCLETWLSRPEVQSCPSC 57 >SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 337 Score = 38.3 bits (85), Expect = 0.005 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPL-CSKI 613 C IC G ++ T +C H FC CLV W CPL C ++ Sbjct: 57 CGICFGVLEDPLVT-TCGHVFCSQCLVHWIAENGTCPLTCEQL 98 >SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10) Length = 169 Score = 37.9 bits (84), Expect = 0.007 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +2 Query: 473 SPPPNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAE--CPLCSKILNQ 622 +P C +C G + CLH FC +C+VT+ + + CP C+ ++++ Sbjct: 59 NPFITCGLCEGYLIKPTTITECLHTFCKSCIVTYLQDSEDNTCPSCNTVIHE 110 >SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 254 Score = 37.5 bits (83), Expect = 0.009 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Frame = +2 Query: 392 SLDDISEANPSSIKSDDSSPHH---DNSRGSPPPNCAICLGTCKNKSFTDSCLHQFCFNC 562 ++ D S SS S+ ++ H+ D + + C ICL T ++ + C H FC+ C Sbjct: 28 NMADTSVGAASSSSSEPTASHNPSEDPNSANANFECNICLDTARD-AVISMCGHLFCWPC 86 Query: 563 LVTWSKV---KAECPLC 604 L W + ++ CP+C Sbjct: 87 LHRWLETRPNRSMCPVC 103 >SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09) Length = 321 Score = 36.7 bits (81), Expect = 0.016 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = +2 Query: 431 KSDDSSPHH----DNSRGSPPPNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECP 598 K D + PH ++ + P C +C T KN T CLH FC C + K ++C Sbjct: 222 KPDSADPHQYEIDSDNEDNLPFACIMCRKTFKNPVVT-KCLHYFCEACALQHYKKNSKCF 280 Query: 599 LC 604 +C Sbjct: 281 VC 282 >SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) Length = 291 Score = 36.7 bits (81), Expect = 0.016 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604 C +C G + + CLH FC C+V + + CP+C Sbjct: 48 CVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYRCPVC 86 >SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) Length = 510 Score = 36.7 bits (81), Expect = 0.016 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604 C +C G + + CLH FC C+V + + CP+C Sbjct: 16 CVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYRCPVC 54 >SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) Length = 858 Score = 34.7 bits (76), Expect = 0.064 Identities = 15/39 (38%), Positives = 16/39 (41%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604 C ICL T C H FC C+ SK CP C Sbjct: 678 CPICLETITYPETLQGCGHTFCRPCITEASKSSKLCPTC 716 >SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) Length = 911 Score = 34.7 bits (76), Expect = 0.064 Identities = 15/39 (38%), Positives = 16/39 (41%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604 C ICL T C H FC C+ SK CP C Sbjct: 753 CPICLETITYPETLQGCGHTFCRPCITEASKSSKLCPTC 791 >SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) Length = 553 Score = 34.3 bits (75), Expect = 0.085 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +2 Query: 518 KSFTDSCLHQFCFNCLVTWSKVKAECPLC 604 ++ T +C H FC CL +W + + CP+C Sbjct: 380 RATTLTCSHSFCEYCLQSWLRKRNTCPIC 408 >SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 362 Score = 34.3 bits (75), Expect = 0.085 Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 15/63 (23%) Frame = +2 Query: 461 NSRGSPPPNCAICLGTCKNK--------SFTDSCLHQFCFNCLVTW-------SKVKAEC 595 N GS CA+CL +K +C+H FC C+ W KV C Sbjct: 165 NVNGSENVTCAVCLDVVMSKPKQSERRFGILPNCIHAFCLECIRKWRKASHAEKKVVRAC 224 Query: 596 PLC 604 P+C Sbjct: 225 PIC 227 >SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) Length = 158 Score = 33.9 bits (74), Expect = 0.11 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +2 Query: 497 CLGTCKNKSFTDSCLHQFCFNCLVT-WSKVKAECPLCS 607 C T K + C H FC+ CL T + + +CP C+ Sbjct: 108 CCNTRKKDAILTKCFHVFCYECLKTRYDTRQRKCPKCN 145 >SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) Length = 406 Score = 33.9 bits (74), Expect = 0.11 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +2 Query: 497 CLGTCKNKSFTDSCLHQFCFNCLVT-WSKVKAECPLCS 607 C T K + C H FC+ CL T + + +CP C+ Sbjct: 356 CCNTRKKDAILTKCFHVFCYECLKTRYDTRQRKCPKCN 393 >SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 362 Score = 33.9 bits (74), Expect = 0.11 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-TWSKVKAE----CPLCSKIL 616 C ICL K+ CLH FC+ CLV S+ K E CP C ++ Sbjct: 16 CPICLERFKDPRVLP-CLHTFCYECLVGLASRYKTEGKWPCPQCKMVV 62 >SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12) Length = 203 Score = 33.9 bits (74), Expect = 0.11 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-TWSKVKAE----CPLCSKIL 616 C ICL K+ CLH FC+ CLV S+ K E CP C ++ Sbjct: 16 CPICLERFKDPRVLP-CLHTFCYECLVGLASRYKTEGKWPCPQCKMVV 62 >SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09) Length = 207 Score = 33.1 bits (72), Expect = 0.20 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAE---CPLCSK 610 C++C + +CLH FC CL +++ CPLC K Sbjct: 68 CSVCYEVFSDPRTLTACLHSFCKECLHKMLSKRSKYIHCPLCRK 111 >SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) Length = 380 Score = 33.1 bits (72), Expect = 0.20 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL---VTWSKVKAECPLCSKILNQ 622 C ICL + S T C H FC CL + + CP+C +NQ Sbjct: 65 CPICLDPLDDPSIT-RCAHVFCTGCLTDVIENEGLAPRCPMCRAPVNQ 111 >SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18) Length = 398 Score = 33.1 bits (72), Expect = 0.20 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Frame = +2 Query: 485 NCAICLGTCKNKSFTDS--CLHQFCFNCLVTWSKVKAECPLCSK 610 +C ICL ++ T C H++C CL W + CP+C K Sbjct: 261 SCPICLEEFTPETPTRLLVCGHKYCEPCLSRWLENNTTCPICRK 304 >SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12) Length = 558 Score = 32.3 bits (70), Expect = 0.34 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 2/43 (4%) Frame = +2 Query: 482 PNCAICLGTCKNKSFTD--SCLHQFCFNCLVTWSKVKAECPLC 604 P C ICL KN C H+F C+ W CPLC Sbjct: 212 PKCVICLEGFKNGQDLRIVPCRHEFHKECVDPWLLSNFTCPLC 254 >SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 514 Score = 31.9 bits (69), Expect = 0.45 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Frame = +2 Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNC---LVTWSKVKAECPLC 604 NC++C + CLH FC C LVT + V CP C Sbjct: 19 NCSLCHRLIRGPKLLP-CLHSFCLACLEDLVTENDVGFNCPQC 60 >SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 139 Score = 31.9 bits (69), Expect = 0.45 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Frame = +2 Query: 485 NCAICLGTCKNKSFTDS--CLHQFCFNCLVTWSKVKAECPLC 604 +C ICLG + T C H F C++ W + CP+C Sbjct: 61 SCPICLGDYEKGESTKQMPCDHLFHPGCILPWLEKTNSCPVC 102 >SB_4080| Best HMM Match : zf-C3HC4 (HMM E-Value=0.23) Length = 203 Score = 31.5 bits (68), Expect = 0.60 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 3/71 (4%) Frame = +2 Query: 395 LDDISEANPSSIKSDDSSPHHDNSRGSPPPNCAICLGTCKNKSFTDS---CLHQFCFNCL 565 L D S+ ++DD S + P C T + SF+ S C+H FC +C Sbjct: 35 LSDDSKDGTELAQTDDGSRAGKRAH----PECYDVNVTLMSDSFSISLQPCMHSFCASCY 90 Query: 566 VTWSKVKAECP 598 W + +CP Sbjct: 91 SQWMEHSRDCP 101 >SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) Length = 471 Score = 31.1 bits (67), Expect = 0.79 Identities = 16/68 (23%), Positives = 27/68 (39%) Frame = +2 Query: 401 DISEANPSSIKSDDSSPHHDNSRGSPPPNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSK 580 D ++ ++++ D N+ C +C + T C H FC +CL Sbjct: 301 DCNDLFSENLENGDIRSPASNTEQLDDFECKLCFNLLL-EPVTSLCGHSFCRDCLYRSLD 359 Query: 581 VKAECPLC 604 + ECP C Sbjct: 360 HRVECPCC 367 >SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08) Length = 688 Score = 31.1 bits (67), Expect = 0.79 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 6/45 (13%) Frame = +2 Query: 488 CAIC--LGTCKNKSFTD----SCLHQFCFNCLVTWSKVKAECPLC 604 C +C + TC+ K +C H FC +C+ W + CP+C Sbjct: 477 CKVCFVMPTCQVKLAKQIMLRTCKHIFCEDCISLWFDREQTCPMC 521 >SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 649 Score = 30.7 bits (66), Expect = 1.0 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 5/44 (11%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL-----VTWSKVKAECPLC 604 C +CLG KN C H FC C+ + K +CP C Sbjct: 20 CPVCLGEYKNPMLL-RCYHSFCLRCVQELLHQSGEKGVVKCPQC 62 >SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034) Length = 671 Score = 30.7 bits (66), Expect = 1.0 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = +2 Query: 542 HQFCFNCLVTWSKVKAECPLCSKILNQ 622 H FC CL W + CP C +NQ Sbjct: 120 HVFCSPCLDLWLRTNRYCPTCRTPINQ 146 >SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) Length = 470 Score = 30.7 bits (66), Expect = 1.0 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 8/47 (17%) Frame = +2 Query: 488 CAICLGTCKNKSFTDS----CLHQFCFNCLVTWS----KVKAECPLC 604 CAIC+ + FTD CLH FC +CL + K K CPLC Sbjct: 15 CAICI-----EHFTDPRLLPCLHTFCRHCLEDLAEHSGKGKLVCPLC 56 >SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) Length = 306 Score = 30.7 bits (66), Expect = 1.0 Identities = 14/35 (40%), Positives = 15/35 (42%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAE 592 C IC + T C H FC CL TW K E Sbjct: 18 CGICAEVLERAVLTP-CGHSFCGVCLETWMNAKLE 51 >SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1459 Score = 30.3 bits (65), Expect = 1.4 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 4/46 (8%) Frame = +2 Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNC----LVTWSKVKAECPLCSK 610 NC +C G + D+C F C LV +V CP C K Sbjct: 1195 NCCVCGGPAGKMAKCDNCPRNFHLKCLEPPLVKMPRVSWTCPKCKK 1240 >SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1829 Score = 30.3 bits (65), Expect = 1.4 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAEC 595 C++CLG ++ +CLH +C +CL + + EC Sbjct: 17 CSLCLGQYQDPRVL-ACLHTYCRHCLESLVEHSKEC 51 >SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 887 Score = 30.3 bits (65), Expect = 1.4 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 3/42 (7%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL---VTWSKVKAECPLC 604 C IC T N CLH FC NCL + + CP C Sbjct: 17 CGICQETYNNPKVLP-CLHSFCQNCLDKSIRSQERVLVCPTC 57 >SB_19621| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 730 Score = 30.3 bits (65), Expect = 1.4 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 6/38 (15%) Frame = +2 Query: 509 CKNKSFTDSCLHQFCFNCLVTWSK------VKAECPLC 604 C+ + T CLH +C C+ W K + + CP C Sbjct: 282 CRERPKTLPCLHHYCAKCIDPWIKTCSDQGINSTCPEC 319 >SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 549 Score = 30.3 bits (65), Expect = 1.4 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 3/44 (6%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL--VTWSKVK-AECPLCSK 610 C +CL K SC H C CL +T++ K CP C + Sbjct: 17 CPVCLEELKEPKCLTSCAHNVCKPCLDRMTFNGEKEIRCPTCRR 60 >SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 288 Score = 29.9 bits (64), Expect = 1.8 Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 5/47 (10%) Frame = +2 Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKA-----ECPLCSK 610 NC C D CLH FC CL T + A CPLC K Sbjct: 15 NCRACHKVFTEPKILD-CLHTFCQKCLGTHDILGAGTNSIVCPLCRK 60 >SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 937 Score = 29.9 bits (64), Expect = 1.8 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 4/43 (9%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKA----ECPLC 604 C ICL K T SC+H C CL + ++ CPLC Sbjct: 21 CPICLDEFKEPK-TLSCMHDLCRKCLEDMAARESSRVIRCPLC 62 >SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 305 Score = 29.5 bits (63), Expect = 2.4 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +2 Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILN 619 +C +C G + + SCLH C CL K +A P C LN Sbjct: 40 SCRVCRGLVVDPFGSQSCLHYVCRGCL---RKKRALNPGCRWCLN 81 >SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035) Length = 351 Score = 29.5 bits (63), Expect = 2.4 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +2 Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILN 619 +C +C G + + SCLH C CL K +A P C LN Sbjct: 40 SCRVCRGLVVDPFGSQSCLHYVCRGCL---RKKRALNPGCRWCLN 81 >SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) Length = 301 Score = 29.5 bits (63), Expect = 2.4 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 5/49 (10%) Frame = +2 Query: 473 SPPPN--CAICLGTCKNKSFTDSCLHQFCFNCLVTW---SKVKAECPLC 604 SPP CAIC T C H FC C+ W + K+ CP+C Sbjct: 153 SPPDFVFCAICKEVLTQPIATP-CDHYFCVLCICEWLDQTYNKSGCPVC 200 >SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) Length = 1631 Score = 29.5 bits (63), Expect = 2.4 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 3/43 (6%) Frame = +2 Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAE---CPLC 604 +C +CL + SC H C CL +K CP+C Sbjct: 22 SCPVCLEVFEEPLVLPSCGHSVCLQCLQNMTKRNPPSLLCPVC 64 >SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05) Length = 406 Score = 29.1 bits (62), Expect = 3.2 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 4/43 (9%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKA----ECPLC 604 C +C+ SC H C CL +K + ECP+C Sbjct: 22 CPVCIEVFVEPKSLPSCAHNVCRECLEKITKRNSIRFVECPIC 64 >SB_20928| Best HMM Match : NHL (HMM E-Value=0) Length = 795 Score = 29.1 bits (62), Expect = 3.2 Identities = 12/30 (40%), Positives = 14/30 (46%) Frame = +2 Query: 476 PPPNCAICLGTCKNKSFTDSCLHQFCFNCL 565 PP C C+ +N CLH FC CL Sbjct: 11 PPEVCPKCMNAYENPKVLP-CLHTFCSQCL 39 >SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 466 Score = 29.1 bits (62), Expect = 3.2 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTW---SKVKAECPLC 604 CAIC T C H FC C+ W + K+ CP+C Sbjct: 160 CAICKEVLTQPIATP-CDHYFCVLCICEWLDQTYNKSGCPVC 200 >SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1257 Score = 29.1 bits (62), Expect = 3.2 Identities = 11/43 (25%), Positives = 19/43 (44%) Frame = +2 Query: 473 SPPPNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPL 601 S P C +C N + +C + FC+ C+ + CP+ Sbjct: 1196 SHPAQCPLCAKVRTNPTALSTCGYVFCYPCIYRYLGQHGCCPV 1238 >SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) Length = 262 Score = 29.1 bits (62), Expect = 3.2 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTW---SKVKAECPLC 604 CAIC T C H FC C+ W + K+ CP+C Sbjct: 34 CAICKEVLTQPIATP-CDHYFCVLCICEWLDQTYNKSGCPVC 74 >SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) Length = 301 Score = 29.1 bits (62), Expect = 3.2 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTW---SKVKAECPLC 604 CAIC T C H FC C+ W + K+ CP+C Sbjct: 160 CAICKEVLTQPIATP-CDHYFCVLCICEWLDQTYNKSGCPVC 200 >SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1022 Score = 29.1 bits (62), Expect = 3.2 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 7/44 (15%) Frame = +2 Query: 494 ICLGTCKNKSFTDS----CLHQFCFNC---LVTWSKVKAECPLC 604 IC G C+ +++TD CLH FC C LVT + K CP C Sbjct: 404 IC-GVCR-ETYTDPRVAPCLHSFCKECVTKLVTERQGKFVCPDC 445 >SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09) Length = 474 Score = 29.1 bits (62), Expect = 3.2 Identities = 13/41 (31%), Positives = 17/41 (41%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSK 610 C C K+ CLH C CL +CP+CS+ Sbjct: 19 CPACSNVIKDPRILP-CLHSICKTCLEKQLNGCLKCPVCSE 58 >SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25) Length = 662 Score = 29.1 bits (62), Expect = 3.2 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 5/29 (17%) Frame = +2 Query: 494 ICLGTCKNKSFTDS-----CLHQFCFNCL 565 IC G C+ S T + CLH FCF CL Sbjct: 21 IC-GICRKSSATSNPKLLPCLHSFCFGCL 48 >SB_42097| Best HMM Match : DUF1605 (HMM E-Value=3e-15) Length = 889 Score = 28.7 bits (61), Expect = 4.2 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +2 Query: 395 LDDISEANPSSIKSDDSSPHHDNSRGSPPPNC 490 LD +PS + +H NS G+PPP+C Sbjct: 424 LDPDPTLHPSIFAARSVILYHHNSNGNPPPSC 455 >SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 767 Score = 28.7 bits (61), Expect = 4.2 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKI 613 C+ C G KN CLH FC +CL K + LC ++ Sbjct: 18 CSACKGFYKNPKRLP-CLHAFCCHCL---KKTQRGTKLCERM 55 >SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) Length = 654 Score = 28.7 bits (61), Expect = 4.2 Identities = 15/45 (33%), Positives = 18/45 (40%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILNQ 622 C +C N T C H FC CL + CP+C L Q Sbjct: 379 CTLCCRLFYNP-VTTPCGHVFCRACLNRSLDHRPGCPICRSSLTQ 422 >SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05) Length = 576 Score = 28.7 bits (61), Expect = 4.2 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 4/43 (9%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL--VTW--SKVKAECPLC 604 C +C+ + SC H C CL +T S ECP+C Sbjct: 22 CPVCIEVFEEPKSLPSCAHNVCRECLEKITARNSSRFVECPIC 64 >SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1555 Score = 28.7 bits (61), Expect = 4.2 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%) Frame = +2 Query: 473 SPPPN---CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCS 607 SPP + CAIC K+ T SC H +C C+ W E L S Sbjct: 22 SPPSDDSMCAICHIVVKDPILT-SCGHSYCKCCIQKWRNRMEEFTLQS 68 >SB_52986| Best HMM Match : zf-C2H2 (HMM E-Value=0.0042) Length = 623 Score = 28.3 bits (60), Expect = 5.6 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = +2 Query: 494 ICLGTCKNKSFT--DSCLHQFCFNCLVTWSKVKAE--CPLCSKILNQ*FI 631 +C+ C+ F+ C H C+ C V +K E C +C L+ FI Sbjct: 13 LCVVCCEEIEFSAVGKCDHPVCYKCCVRMRVLKQENYCTVCRSELSMIFI 62 >SB_41743| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1436 Score = 28.3 bits (60), Expect = 5.6 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +2 Query: 371 IMATIPQSLDDISEANPSSIKSDDSSP 451 I+ IP++ DDI + PS ++DS+P Sbjct: 1222 ILGDIPKTDDDIRDGEPSDSATEDSAP 1248 >SB_27224| Best HMM Match : RNase_P_p30 (HMM E-Value=5.9) Length = 489 Score = 28.3 bits (60), Expect = 5.6 Identities = 13/47 (27%), Positives = 25/47 (53%) Frame = +3 Query: 360 HDRQSWRLYHNLWMISLKQTQAA*RVMIAVHIMTTAEGRHLLTVQYV 500 H Q H L ++++++ V +H++T +G HLLTV+ + Sbjct: 69 HGAQRLTFTHGLHLLTVRKGLHLLTVHKGLHLLTVRKGLHLLTVRKI 115 >SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09) Length = 589 Score = 28.3 bits (60), Expect = 5.6 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = +2 Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCL---VTWSKVK-AECPLCSK 610 +C +CL +C H C CL T S+ K CP+C K Sbjct: 22 SCPVCLEDFLEPKSLPNCAHNVCRKCLEGMATDSESKEIRCPVCRK 67 >SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2070 Score = 27.9 bits (59), Expect = 7.4 Identities = 14/76 (18%), Positives = 40/76 (52%) Frame = -2 Query: 463 VVMMWTAIITLYAAWVCFRDIIQRLWYSRHDCLS*YFQWLHHIMCLKSSTLSIYLPIVIF 284 V+M++ I+ + V ++ + + H + + ++H++ + + +YL I+++ Sbjct: 89 VIMVYHVIMVYHVIMVYHVIMVYHVIMTYHVIMVYHVIMVYHVIMVYH-VIMVYLVIMVY 147 Query: 283 PVASPHHVSQIFNVIV 236 V +HV +++VI+ Sbjct: 148 HVIMVYHVIMVYHVIM 163 Score = 27.5 bits (58), Expect = 9.7 Identities = 14/76 (18%), Positives = 39/76 (51%) Frame = -2 Query: 463 VVMMWTAIITLYAAWVCFRDIIQRLWYSRHDCLS*YFQWLHHIMCLKSSTLSIYLPIVIF 284 V+M++ I+ + V ++ + H + + ++H++ + + +YL I+++ Sbjct: 29 VIMVYLVIMVYHVVMVYHVIMVYHVIMVYHVIMVYHVIMVYHVIMVYH-VIMVYLVIMVY 87 Query: 283 PVASPHHVSQIFNVIV 236 V +HV +++VI+ Sbjct: 88 HVIMVYHVIMVYHVIM 103 >SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1) Length = 284 Score = 27.9 bits (59), Expect = 7.4 Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 2/97 (2%) Frame = +3 Query: 321 DLRHMMW*SHWKYHDRQSWRLYHNLWMI-SLKQTQAA*RVMIAVHIMTTAEGRHLLTVQY 497 D H + SH+ Y + R+ + L + +TQ R+ HI T RH L + Sbjct: 94 DTTHTKYPSHYTYRIPYTLRIPNTLHTTHTAYRTQCTYRIPYRYHIRYTLHVRHTLRTTH 153 Query: 498 V*EHVKTNHSLILAC-TNFVSTVL*LGVR*KQNVHYA 605 T H+ AC T++ R HYA Sbjct: 154 TTYATHTVHTRHTACPTHYTYATHYAEQRPHDPTHYA 190 >SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1094 Score = 27.9 bits (59), Expect = 7.4 Identities = 14/45 (31%), Positives = 18/45 (40%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILNQ 622 C+ C + T C H C C SK CPLC K + + Sbjct: 18 CSYCRKVYLHPLVT-GCGHVLCTKCYNKRSKKHLGCPLCGKSMGE 61 >SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 632 Score = 27.9 bits (59), Expect = 7.4 Identities = 12/26 (46%), Positives = 12/26 (46%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL 565 C C KN T CLH FC CL Sbjct: 16 CRQCSNVFKNPRITP-CLHSFCAECL 40 >SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) Length = 629 Score = 27.9 bits (59), Expect = 7.4 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604 C++C+ + CLH FC +CL + K K CPLC Sbjct: 135 CSLCIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGKGKLVCPLC 177 >SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019) Length = 413 Score = 27.9 bits (59), Expect = 7.4 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 5/46 (10%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAE-----CPLCSK 610 C IC + C H C +CL K+K E CP+C K Sbjct: 22 CPICTEIFETPKCLPVCAHNVCLSCL---KKMKIEQGFIKCPICRK 64 >SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061) Length = 63 Score = 27.9 bits (59), Expect = 7.4 Identities = 13/42 (30%), Positives = 17/42 (40%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKI 613 C IC+ + SC H C C + K CP C+ I Sbjct: 11 CLICMEPYTVPLVSISCWHVHCEECWLRTLGAKKLCPQCNMI 52 >SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) Length = 316 Score = 27.9 bits (59), Expect = 7.4 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604 C+IC+ + CLH FC +CL + + K CPLC Sbjct: 15 CSICIEHLNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57 >SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) Length = 320 Score = 27.9 bits (59), Expect = 7.4 Identities = 12/41 (29%), Positives = 19/41 (46%) Frame = +2 Query: 482 PNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604 P+C +CL + C H FCF C+ + +C +C Sbjct: 69 PDCPVCLQQA-SYPVRLPCGHMFCFLCIKGVALRSRKCAIC 108 >SB_31765| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 241 Score = 27.5 bits (58), Expect = 9.7 Identities = 14/44 (31%), Positives = 18/44 (40%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILN 619 C IC +K H C CL V + CP+C IL+ Sbjct: 112 CPIC-SELLDKPVETIFTHNACGACLTQALAVNSSCPVCKTILS 154 >SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) Length = 119 Score = 27.5 bits (58), Expect = 9.7 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604 C+IC+ + CLH FC +CL + + K CPLC Sbjct: 15 CSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57 >SB_27793| Best HMM Match : Alpha_GJ (HMM E-Value=7.6) Length = 165 Score = 27.5 bits (58), Expect = 9.7 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -2 Query: 193 NNVFQLNQDI*HIMLKTTLLHIFYVHSYVYELR 95 + QLN D+ I++KTTLL +V LR Sbjct: 106 DTAIQLNNDVLEIIIKTTLLSFEIYEMFVNSLR 138 >SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 387 Score = 27.5 bits (58), Expect = 9.7 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 4/48 (8%) Frame = +2 Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCLV----TWSKVKAECPLCSKIL 616 +C IC + C H C CL+ + ECP+C I+ Sbjct: 24 SCPICYEDFEEPKCLPKCAHNICRECLLGIIEKAQLERFECPICRAIV 71 >SB_4752| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 430 Score = 27.5 bits (58), Expect = 9.7 Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 2/34 (5%) Frame = -2 Query: 463 VVMMWTAIIT--LYAAWVCFRDIIQRLWYSRHDC 368 +V +W A++ + A CF+ + +RLW+ ++ C Sbjct: 383 LVSLWNAVLAFKVEAKQRCFKFLYERLWFKQNIC 416 >SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) Length = 62 Score = 27.5 bits (58), Expect = 9.7 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604 C+IC+ + CLH FC +CL + + K CPLC Sbjct: 15 CSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57 >SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) Length = 62 Score = 27.5 bits (58), Expect = 9.7 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604 C+IC+ + CLH FC +CL + + K CPLC Sbjct: 15 CSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57 >SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022) Length = 229 Score = 27.5 bits (58), Expect = 9.7 Identities = 14/44 (31%), Positives = 18/44 (40%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILN 619 C IC +K H C CL V + CP+C IL+ Sbjct: 133 CPIC-SELLDKPVETIFTHNACGACLTQALAVNSSCPVCKTILS 175 >SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) Length = 463 Score = 27.5 bits (58), Expect = 9.7 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604 C+IC+ + CLH FC +CL + + K CPLC Sbjct: 15 CSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57 >SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 888 Score = 27.5 bits (58), Expect = 9.7 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Frame = +2 Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604 C+IC+ + CLH FC +CL + + K CPLC Sbjct: 14 CSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 56 >SB_9920| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 601 Score = 27.5 bits (58), Expect = 9.7 Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 2/34 (5%) Frame = -2 Query: 463 VVMMWTAIIT--LYAAWVCFRDIIQRLWYSRHDC 368 +V +W A++ + A CF+ + +RLW+ ++ C Sbjct: 385 LVSLWNAVLAFKVEAKQRCFKFLYERLWFKQNIC 418 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,370,060 Number of Sequences: 59808 Number of extensions: 436167 Number of successful extensions: 1265 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 1062 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1256 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1608851125 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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