Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0964
(638 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 39 0.004
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10) 38 0.007
SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09) 37 0.016
SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 37 0.016
SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 37 0.016
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 35 0.064
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 35 0.064
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 34 0.085
SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.085
SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 34 0.11
SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 34 0.11
SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12) 34 0.11
SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09) 33 0.20
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) 33 0.20
SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18) 33 0.20
SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12) 32 0.34
SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_4080| Best HMM Match : zf-C3HC4 (HMM E-Value=0.23) 31 0.60
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 31 0.79
SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08) 31 0.79
SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034) 31 1.0
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 31 1.0
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 31 1.0
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_19621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035) 29 2.4
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 29 2.4
SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) 29 2.4
SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05) 29 3.2
SB_20928| Best HMM Match : NHL (HMM E-Value=0) 29 3.2
SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 29 3.2
SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 29 3.2
SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09) 29 3.2
SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25) 29 3.2
SB_42097| Best HMM Match : DUF1605 (HMM E-Value=3e-15) 29 4.2
SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 29 4.2
SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05) 29 4.2
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_52986| Best HMM Match : zf-C2H2 (HMM E-Value=0.0042) 28 5.6
SB_41743| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_27224| Best HMM Match : RNase_P_p30 (HMM E-Value=5.9) 28 5.6
SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09) 28 5.6
SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1) 28 7.4
SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) 28 7.4
SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019) 28 7.4
SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061) 28 7.4
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) 28 7.4
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 28 7.4
SB_31765| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 27 9.7
SB_27793| Best HMM Match : Alpha_GJ (HMM E-Value=7.6) 27 9.7
SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_4752| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 27 9.7
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 27 9.7
SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022) 27 9.7
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 27 9.7
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_9920| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 42.7 bits (96), Expect = 2e-04
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604
C +C G + + CLH FC +C+V+W + CP+C
Sbjct: 1366 CVLCGGYLVDATTIVECLHSFCRSCIVSWLQASYHCPVC 1404
>SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 395 LDDISEANPSSIKSDDSSPHHDNSRGSPPPNCAICLGTCKNKSF--TDSCLHQFCFNCLV 568
+DD+ + D + +D++ S C +CL + + +SC+H FC C++
Sbjct: 71 VDDVGSDDDDDEVPDVNISDNDDATMSNSAQCPVCLMSLSEQKLGTPNSCMHVFCLECIL 130
Query: 569 TWSKVKAE 592
WSK+ E
Sbjct: 131 EWSKIPVE 138
>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 346
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTW-SKVKAE-CPLC 604
C IC+G +N + T C H FC +CL TW S+ + + CP C
Sbjct: 18 CNICVGVLEN-AITTICGHSFCESCLETWLSRPEVQSCPSC 57
>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPL-CSKI 613
C IC G ++ T +C H FC CLV W CPL C ++
Sbjct: 57 CGICFGVLEDPLVT-TCGHVFCSQCLVHWIAENGTCPLTCEQL 98
>SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10)
Length = 169
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 473 SPPPNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAE--CPLCSKILNQ 622
+P C +C G + CLH FC +C+VT+ + + CP C+ ++++
Sbjct: 59 NPFITCGLCEGYLIKPTTITECLHTFCKSCIVTYLQDSEDNTCPSCNTVIHE 110
>SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +2
Query: 392 SLDDISEANPSSIKSDDSSPHH---DNSRGSPPPNCAICLGTCKNKSFTDSCLHQFCFNC 562
++ D S SS S+ ++ H+ D + + C ICL T ++ + C H FC+ C
Sbjct: 28 NMADTSVGAASSSSSEPTASHNPSEDPNSANANFECNICLDTARD-AVISMCGHLFCWPC 86
Query: 563 LVTWSKV---KAECPLC 604
L W + ++ CP+C
Sbjct: 87 LHRWLETRPNRSMCPVC 103
>SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)
Length = 321
Score = 36.7 bits (81), Expect = 0.016
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +2
Query: 431 KSDDSSPHH----DNSRGSPPPNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECP 598
K D + PH ++ + P C +C T KN T CLH FC C + K ++C
Sbjct: 222 KPDSADPHQYEIDSDNEDNLPFACIMCRKTFKNPVVT-KCLHYFCEACALQHYKKNSKCF 280
Query: 599 LC 604
+C
Sbjct: 281 VC 282
>SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 291
Score = 36.7 bits (81), Expect = 0.016
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604
C +C G + + CLH FC C+V + + CP+C
Sbjct: 48 CVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYRCPVC 86
>SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 510
Score = 36.7 bits (81), Expect = 0.016
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604
C +C G + + CLH FC C+V + + CP+C
Sbjct: 16 CVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYRCPVC 54
>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 858
Score = 34.7 bits (76), Expect = 0.064
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604
C ICL T C H FC C+ SK CP C
Sbjct: 678 CPICLETITYPETLQGCGHTFCRPCITEASKSSKLCPTC 716
>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 911
Score = 34.7 bits (76), Expect = 0.064
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604
C ICL T C H FC C+ SK CP C
Sbjct: 753 CPICLETITYPETLQGCGHTFCRPCITEASKSSKLCPTC 791
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 34.3 bits (75), Expect = 0.085
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 518 KSFTDSCLHQFCFNCLVTWSKVKAECPLC 604
++ T +C H FC CL +W + + CP+C
Sbjct: 380 RATTLTCSHSFCEYCLQSWLRKRNTCPIC 408
>SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 34.3 bits (75), Expect = 0.085
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 15/63 (23%)
Frame = +2
Query: 461 NSRGSPPPNCAICLGTCKNK--------SFTDSCLHQFCFNCLVTW-------SKVKAEC 595
N GS CA+CL +K +C+H FC C+ W KV C
Sbjct: 165 NVNGSENVTCAVCLDVVMSKPKQSERRFGILPNCIHAFCLECIRKWRKASHAEKKVVRAC 224
Query: 596 PLC 604
P+C
Sbjct: 225 PIC 227
>SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 158
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 497 CLGTCKNKSFTDSCLHQFCFNCLVT-WSKVKAECPLCS 607
C T K + C H FC+ CL T + + +CP C+
Sbjct: 108 CCNTRKKDAILTKCFHVFCYECLKTRYDTRQRKCPKCN 145
>SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 406
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 497 CLGTCKNKSFTDSCLHQFCFNCLVT-WSKVKAECPLCS 607
C T K + C H FC+ CL T + + +CP C+
Sbjct: 356 CCNTRKKDAILTKCFHVFCYECLKTRYDTRQRKCPKCN 393
>SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-TWSKVKAE----CPLCSKIL 616
C ICL K+ CLH FC+ CLV S+ K E CP C ++
Sbjct: 16 CPICLERFKDPRVLP-CLHTFCYECLVGLASRYKTEGKWPCPQCKMVV 62
>SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)
Length = 203
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-TWSKVKAE----CPLCSKIL 616
C ICL K+ CLH FC+ CLV S+ K E CP C ++
Sbjct: 16 CPICLERFKDPRVLP-CLHTFCYECLVGLASRYKTEGKWPCPQCKMVV 62
>SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)
Length = 207
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAE---CPLCSK 610
C++C + +CLH FC CL +++ CPLC K
Sbjct: 68 CSVCYEVFSDPRTLTACLHSFCKECLHKMLSKRSKYIHCPLCRK 111
>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
Length = 380
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL---VTWSKVKAECPLCSKILNQ 622
C ICL + S T C H FC CL + + CP+C +NQ
Sbjct: 65 CPICLDPLDDPSIT-RCAHVFCTGCLTDVIENEGLAPRCPMCRAPVNQ 111
>SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)
Length = 398
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 485 NCAICLGTCKNKSFTDS--CLHQFCFNCLVTWSKVKAECPLCSK 610
+C ICL ++ T C H++C CL W + CP+C K
Sbjct: 261 SCPICLEEFTPETPTRLLVCGHKYCEPCLSRWLENNTTCPICRK 304
>SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12)
Length = 558
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +2
Query: 482 PNCAICLGTCKNKSFTD--SCLHQFCFNCLVTWSKVKAECPLC 604
P C ICL KN C H+F C+ W CPLC
Sbjct: 212 PKCVICLEGFKNGQDLRIVPCRHEFHKECVDPWLLSNFTCPLC 254
>SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +2
Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNC---LVTWSKVKAECPLC 604
NC++C + CLH FC C LVT + V CP C
Sbjct: 19 NCSLCHRLIRGPKLLP-CLHSFCLACLEDLVTENDVGFNCPQC 60
>SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +2
Query: 485 NCAICLGTCKNKSFTDS--CLHQFCFNCLVTWSKVKAECPLC 604
+C ICLG + T C H F C++ W + CP+C
Sbjct: 61 SCPICLGDYEKGESTKQMPCDHLFHPGCILPWLEKTNSCPVC 102
>SB_4080| Best HMM Match : zf-C3HC4 (HMM E-Value=0.23)
Length = 203
Score = 31.5 bits (68), Expect = 0.60
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = +2
Query: 395 LDDISEANPSSIKSDDSSPHHDNSRGSPPPNCAICLGTCKNKSFTDS---CLHQFCFNCL 565
L D S+ ++DD S + P C T + SF+ S C+H FC +C
Sbjct: 35 LSDDSKDGTELAQTDDGSRAGKRAH----PECYDVNVTLMSDSFSISLQPCMHSFCASCY 90
Query: 566 VTWSKVKAECP 598
W + +CP
Sbjct: 91 SQWMEHSRDCP 101
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 31.1 bits (67), Expect = 0.79
Identities = 16/68 (23%), Positives = 27/68 (39%)
Frame = +2
Query: 401 DISEANPSSIKSDDSSPHHDNSRGSPPPNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSK 580
D ++ ++++ D N+ C +C + T C H FC +CL
Sbjct: 301 DCNDLFSENLENGDIRSPASNTEQLDDFECKLCFNLLL-EPVTSLCGHSFCRDCLYRSLD 359
Query: 581 VKAECPLC 604
+ ECP C
Sbjct: 360 HRVECPCC 367
>SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08)
Length = 688
Score = 31.1 bits (67), Expect = 0.79
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Frame = +2
Query: 488 CAIC--LGTCKNKSFTD----SCLHQFCFNCLVTWSKVKAECPLC 604
C +C + TC+ K +C H FC +C+ W + CP+C
Sbjct: 477 CKVCFVMPTCQVKLAKQIMLRTCKHIFCEDCISLWFDREQTCPMC 521
>SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL-----VTWSKVKAECPLC 604
C +CLG KN C H FC C+ + K +CP C
Sbjct: 20 CPVCLGEYKNPMLL-RCYHSFCLRCVQELLHQSGEKGVVKCPQC 62
>SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034)
Length = 671
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 542 HQFCFNCLVTWSKVKAECPLCSKILNQ 622
H FC CL W + CP C +NQ
Sbjct: 120 HVFCSPCLDLWLRTNRYCPTCRTPINQ 146
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDS----CLHQFCFNCLVTWS----KVKAECPLC 604
CAIC+ + FTD CLH FC +CL + K K CPLC
Sbjct: 15 CAICI-----EHFTDPRLLPCLHTFCRHCLEDLAEHSGKGKLVCPLC 56
>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 306
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAE 592
C IC + T C H FC CL TW K E
Sbjct: 18 CGICAEVLERAVLTP-CGHSFCGVCLETWMNAKLE 51
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Frame = +2
Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNC----LVTWSKVKAECPLCSK 610
NC +C G + D+C F C LV +V CP C K
Sbjct: 1195 NCCVCGGPAGKMAKCDNCPRNFHLKCLEPPLVKMPRVSWTCPKCKK 1240
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAEC 595
C++CLG ++ +CLH +C +CL + + EC
Sbjct: 17 CSLCLGQYQDPRVL-ACLHTYCRHCLESLVEHSKEC 51
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL---VTWSKVKAECPLC 604
C IC T N CLH FC NCL + + CP C
Sbjct: 17 CGICQETYNNPKVLP-CLHSFCQNCLDKSIRSQERVLVCPTC 57
>SB_19621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 6/38 (15%)
Frame = +2
Query: 509 CKNKSFTDSCLHQFCFNCLVTWSK------VKAECPLC 604
C+ + T CLH +C C+ W K + + CP C
Sbjct: 282 CRERPKTLPCLHHYCAKCIDPWIKTCSDQGINSTCPEC 319
>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL--VTWSKVK-AECPLCSK 610
C +CL K SC H C CL +T++ K CP C +
Sbjct: 17 CPVCLEELKEPKCLTSCAHNVCKPCLDRMTFNGEKEIRCPTCRR 60
>SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Frame = +2
Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKA-----ECPLCSK 610
NC C D CLH FC CL T + A CPLC K
Sbjct: 15 NCRACHKVFTEPKILD-CLHTFCQKCLGTHDILGAGTNSIVCPLCRK 60
>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKA----ECPLC 604
C ICL K T SC+H C CL + ++ CPLC
Sbjct: 21 CPICLDEFKEPK-TLSCMHDLCRKCLEDMAARESSRVIRCPLC 62
>SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILN 619
+C +C G + + SCLH C CL K +A P C LN
Sbjct: 40 SCRVCRGLVVDPFGSQSCLHYVCRGCL---RKKRALNPGCRWCLN 81
>SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035)
Length = 351
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILN 619
+C +C G + + SCLH C CL K +A P C LN
Sbjct: 40 SCRVCRGLVVDPFGSQSCLHYVCRGCL---RKKRALNPGCRWCLN 81
>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Frame = +2
Query: 473 SPPPN--CAICLGTCKNKSFTDSCLHQFCFNCLVTW---SKVKAECPLC 604
SPP CAIC T C H FC C+ W + K+ CP+C
Sbjct: 153 SPPDFVFCAICKEVLTQPIATP-CDHYFCVLCICEWLDQTYNKSGCPVC 200
>SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)
Length = 1631
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +2
Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAE---CPLC 604
+C +CL + SC H C CL +K CP+C
Sbjct: 22 SCPVCLEVFEEPLVLPSCGHSVCLQCLQNMTKRNPPSLLCPVC 64
>SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05)
Length = 406
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKA----ECPLC 604
C +C+ SC H C CL +K + ECP+C
Sbjct: 22 CPVCIEVFVEPKSLPSCAHNVCRECLEKITKRNSIRFVECPIC 64
>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
Length = 795
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 476 PPPNCAICLGTCKNKSFTDSCLHQFCFNCL 565
PP C C+ +N CLH FC CL
Sbjct: 11 PPEVCPKCMNAYENPKVLP-CLHTFCSQCL 39
>SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTW---SKVKAECPLC 604
CAIC T C H FC C+ W + K+ CP+C
Sbjct: 160 CAICKEVLTQPIATP-CDHYFCVLCICEWLDQTYNKSGCPVC 200
>SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1257
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = +2
Query: 473 SPPPNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPL 601
S P C +C N + +C + FC+ C+ + CP+
Sbjct: 1196 SHPAQCPLCAKVRTNPTALSTCGYVFCYPCIYRYLGQHGCCPV 1238
>SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 262
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTW---SKVKAECPLC 604
CAIC T C H FC C+ W + K+ CP+C
Sbjct: 34 CAICKEVLTQPIATP-CDHYFCVLCICEWLDQTYNKSGCPVC 74
>SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTW---SKVKAECPLC 604
CAIC T C H FC C+ W + K+ CP+C
Sbjct: 160 CAICKEVLTQPIATP-CDHYFCVLCICEWLDQTYNKSGCPVC 200
>SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1022
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 7/44 (15%)
Frame = +2
Query: 494 ICLGTCKNKSFTDS----CLHQFCFNC---LVTWSKVKAECPLC 604
IC G C+ +++TD CLH FC C LVT + K CP C
Sbjct: 404 IC-GVCR-ETYTDPRVAPCLHSFCKECVTKLVTERQGKFVCPDC 445
>SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09)
Length = 474
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSK 610
C C K+ CLH C CL +CP+CS+
Sbjct: 19 CPACSNVIKDPRILP-CLHSICKTCLEKQLNGCLKCPVCSE 58
>SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25)
Length = 662
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 5/29 (17%)
Frame = +2
Query: 494 ICLGTCKNKSFTDS-----CLHQFCFNCL 565
IC G C+ S T + CLH FCF CL
Sbjct: 21 IC-GICRKSSATSNPKLLPCLHSFCFGCL 48
>SB_42097| Best HMM Match : DUF1605 (HMM E-Value=3e-15)
Length = 889
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 395 LDDISEANPSSIKSDDSSPHHDNSRGSPPPNC 490
LD +PS + +H NS G+PPP+C
Sbjct: 424 LDPDPTLHPSIFAARSVILYHHNSNGNPPPSC 455
>SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKI 613
C+ C G KN CLH FC +CL K + LC ++
Sbjct: 18 CSACKGFYKNPKRLP-CLHAFCCHCL---KKTQRGTKLCERM 55
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILNQ 622
C +C N T C H FC CL + CP+C L Q
Sbjct: 379 CTLCCRLFYNP-VTTPCGHVFCRACLNRSLDHRPGCPICRSSLTQ 422
>SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05)
Length = 576
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL--VTW--SKVKAECPLC 604
C +C+ + SC H C CL +T S ECP+C
Sbjct: 22 CPVCIEVFEEPKSLPSCAHNVCRECLEKITARNSSRFVECPIC 64
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +2
Query: 473 SPPPN---CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCS 607
SPP + CAIC K+ T SC H +C C+ W E L S
Sbjct: 22 SPPSDDSMCAICHIVVKDPILT-SCGHSYCKCCIQKWRNRMEEFTLQS 68
>SB_52986| Best HMM Match : zf-C2H2 (HMM E-Value=0.0042)
Length = 623
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +2
Query: 494 ICLGTCKNKSFT--DSCLHQFCFNCLVTWSKVKAE--CPLCSKILNQ*FI 631
+C+ C+ F+ C H C+ C V +K E C +C L+ FI
Sbjct: 13 LCVVCCEEIEFSAVGKCDHPVCYKCCVRMRVLKQENYCTVCRSELSMIFI 62
>SB_41743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1436
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 371 IMATIPQSLDDISEANPSSIKSDDSSP 451
I+ IP++ DDI + PS ++DS+P
Sbjct: 1222 ILGDIPKTDDDIRDGEPSDSATEDSAP 1248
>SB_27224| Best HMM Match : RNase_P_p30 (HMM E-Value=5.9)
Length = 489
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 360 HDRQSWRLYHNLWMISLKQTQAA*RVMIAVHIMTTAEGRHLLTVQYV 500
H Q H L ++++++ V +H++T +G HLLTV+ +
Sbjct: 69 HGAQRLTFTHGLHLLTVRKGLHLLTVHKGLHLLTVRKGLHLLTVRKI 115
>SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09)
Length = 589
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Frame = +2
Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCL---VTWSKVK-AECPLCSK 610
+C +CL +C H C CL T S+ K CP+C K
Sbjct: 22 SCPVCLEDFLEPKSLPNCAHNVCRKCLEGMATDSESKEIRCPVCRK 67
>SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2070
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/76 (18%), Positives = 40/76 (52%)
Frame = -2
Query: 463 VVMMWTAIITLYAAWVCFRDIIQRLWYSRHDCLS*YFQWLHHIMCLKSSTLSIYLPIVIF 284
V+M++ I+ + V ++ + + H + + ++H++ + + +YL I+++
Sbjct: 89 VIMVYHVIMVYHVIMVYHVIMVYHVIMTYHVIMVYHVIMVYHVIMVYH-VIMVYLVIMVY 147
Query: 283 PVASPHHVSQIFNVIV 236
V +HV +++VI+
Sbjct: 148 HVIMVYHVIMVYHVIM 163
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/76 (18%), Positives = 39/76 (51%)
Frame = -2
Query: 463 VVMMWTAIITLYAAWVCFRDIIQRLWYSRHDCLS*YFQWLHHIMCLKSSTLSIYLPIVIF 284
V+M++ I+ + V ++ + H + + ++H++ + + +YL I+++
Sbjct: 29 VIMVYLVIMVYHVVMVYHVIMVYHVIMVYHVIMVYHVIMVYHVIMVYH-VIMVYLVIMVY 87
Query: 283 PVASPHHVSQIFNVIV 236
V +HV +++VI+
Sbjct: 88 HVIMVYHVIMVYHVIM 103
>SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1)
Length = 284
Score = 27.9 bits (59), Expect = 7.4
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Frame = +3
Query: 321 DLRHMMW*SHWKYHDRQSWRLYHNLWMI-SLKQTQAA*RVMIAVHIMTTAEGRHLLTVQY 497
D H + SH+ Y + R+ + L + +TQ R+ HI T RH L +
Sbjct: 94 DTTHTKYPSHYTYRIPYTLRIPNTLHTTHTAYRTQCTYRIPYRYHIRYTLHVRHTLRTTH 153
Query: 498 V*EHVKTNHSLILAC-TNFVSTVL*LGVR*KQNVHYA 605
T H+ AC T++ R HYA
Sbjct: 154 TTYATHTVHTRHTACPTHYTYATHYAEQRPHDPTHYA 190
>SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1094
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILNQ 622
C+ C + T C H C C SK CPLC K + +
Sbjct: 18 CSYCRKVYLHPLVT-GCGHVLCTKCYNKRSKKHLGCPLCGKSMGE 61
>SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCL 565
C C KN T CLH FC CL
Sbjct: 16 CRQCSNVFKNPRITP-CLHSFCAECL 40
>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
Length = 629
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604
C++C+ + CLH FC +CL + K K CPLC
Sbjct: 135 CSLCIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGKGKLVCPLC 177
>SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019)
Length = 413
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAE-----CPLCSK 610
C IC + C H C +CL K+K E CP+C K
Sbjct: 22 CPICTEIFETPKCLPVCAHNVCLSCL---KKMKIEQGFIKCPICRK 64
>SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061)
Length = 63
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKI 613
C IC+ + SC H C C + K CP C+ I
Sbjct: 11 CLICMEPYTVPLVSISCWHVHCEECWLRTLGAKKLCPQCNMI 52
>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
Length = 316
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604
C+IC+ + CLH FC +CL + + K CPLC
Sbjct: 15 CSICIEHLNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +2
Query: 482 PNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604
P+C +CL + C H FCF C+ + +C +C
Sbjct: 69 PDCPVCLQQA-SYPVRLPCGHMFCFLCIKGVALRSRKCAIC 108
>SB_31765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILN 619
C IC +K H C CL V + CP+C IL+
Sbjct: 112 CPIC-SELLDKPVETIFTHNACGACLTQALAVNSSCPVCKTILS 154
>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 119
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604
C+IC+ + CLH FC +CL + + K CPLC
Sbjct: 15 CSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57
>SB_27793| Best HMM Match : Alpha_GJ (HMM E-Value=7.6)
Length = 165
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 193 NNVFQLNQDI*HIMLKTTLLHIFYVHSYVYELR 95
+ QLN D+ I++KTTLL +V LR
Sbjct: 106 DTAIQLNNDVLEIIIKTTLLSFEIYEMFVNSLR 138
>SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = +2
Query: 485 NCAICLGTCKNKSFTDSCLHQFCFNCLV----TWSKVKAECPLCSKIL 616
+C IC + C H C CL+ + ECP+C I+
Sbjct: 24 SCPICYEDFEEPKCLPKCAHNICRECLLGIIEKAQLERFECPICRAIV 71
>SB_4752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 430
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -2
Query: 463 VVMMWTAIIT--LYAAWVCFRDIIQRLWYSRHDC 368
+V +W A++ + A CF+ + +RLW+ ++ C
Sbjct: 383 LVSLWNAVLAFKVEAKQRCFKFLYERLWFKQNIC 416
>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604
C+IC+ + CLH FC +CL + + K CPLC
Sbjct: 15 CSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57
>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604
C+IC+ + CLH FC +CL + + K CPLC
Sbjct: 15 CSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57
>SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022)
Length = 229
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLCSKILN 619
C IC +K H C CL V + CP+C IL+
Sbjct: 133 CPIC-SELLDKPVETIFTHNACGACLTQALAVNSSCPVCKTILS 175
>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 463
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604
C+IC+ + CLH FC +CL + + K CPLC
Sbjct: 15 CSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 57
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +2
Query: 488 CAICLGTCKNKSFTDSCLHQFCFNCLV-----TWSKVKAECPLC 604
C+IC+ + CLH FC +CL + + K CPLC
Sbjct: 14 CSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLC 56
>SB_9920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 601
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -2
Query: 463 VVMMWTAIIT--LYAAWVCFRDIIQRLWYSRHDC 368
+V +W A++ + A CF+ + +RLW+ ++ C
Sbjct: 385 LVSLWNAVLAFKVEAKQRCFKFLYERLWFKQNIC 418
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,370,060
Number of Sequences: 59808
Number of extensions: 436167
Number of successful extensions: 1265
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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