Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0964
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    28   0.22 
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    28   0.22 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   3.5  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   8.2  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 28.3 bits (60), Expect = 0.22
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 479 PPNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604
           P  C +C  +  +   T  C H FC  C +   K  + C +C
Sbjct: 244 PFKCYVCRESFVDPIVT-KCKHYFCERCALAQYKKSSRCAIC 284


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 28.3 bits (60), Expect = 0.22
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 479 PPNCAICLGTCKNKSFTDSCLHQFCFNCLVTWSKVKAECPLC 604
           P  C +C  +  +   T  C H FC  C +   K  + C +C
Sbjct: 244 PFKCYVCRESFVDPIVT-KCKHYFCERCALAQYKKSSRCAIC 284


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 155 NMSNVLI*LKYIIYHVTLQRN-LSGTYRHNNVE 250
           N++++ +  K  I  + +  N L   YRHNNVE
Sbjct: 685 NIAHIYVEQKQYISAIQMYENCLKKFYRHNNVE 717


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 137 VTHILCPFIC 108
           VTHILC ++C
Sbjct: 36  VTHILCAYLC 45


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,115
Number of Sequences: 2352
Number of extensions: 15543
Number of successful extensions: 244
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)