Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0962
(740 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0255 + 19462668-19462695,19463443-19464491 187 7e-48
01_06_1721 - 39426957-39428005,39428812-39428839 186 1e-47
08_01_0142 - 1121762-1122822,1123087-1123114 175 4e-44
06_03_0718 + 23840198-23840409,23841368-23841518,23842190-238422... 174 5e-44
11_01_0448 - 3469398-3469676,3470015-3470284,3470386-3470476,347... 159 3e-39
12_01_0448 + 3537661-3538018,3538920-3539047,3539740-3539763,354... 79 3e-15
07_03_1705 + 28848293-28848321,28848766-28848841,28848940-288490... 32 0.55
06_01_0093 - 776567-777335,777449-777747 32 0.55
05_02_0156 + 7163756-7163834,7165447-7166225 32 0.55
03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968 32 0.55
05_07_0146 + 28018236-28018580,28018670-28018777,28018984-280191... 31 0.96
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 31 0.96
01_04_0116 + 16189250-16189411,16189577-16190104 31 1.3
07_01_1073 + 9566727-9566963,9566992-9567180 30 1.7
04_01_0610 - 7997406-7998047,7998379-7998426,8000719-8001143,800... 30 1.7
02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,850... 30 1.7
04_04_1463 + 33787799-33787973,33788669-33789096 30 2.2
06_03_0810 - 24817268-24817350,24817547-24817697,24818441-248185... 29 2.9
06_02_0363 - 15172528-15173224,15174564-15174856 29 2.9
12_02_0167 - 14824241-14824279,14824385-14824423,14824509-148247... 29 3.9
11_03_0208 - 11682869-11683459 29 3.9
10_05_0101 - 9167383-9167679,9167883-9167961,9168161-9168326,916... 29 3.9
02_05_1121 + 34262019-34262040,34262144-34262211,34262909-342630... 29 3.9
08_02_0574 - 18867623-18868033,18869751-18870209 29 5.1
12_02_1168 + 26651863-26651974,26652087-26652290,26652392-266525... 28 6.8
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938... 28 6.8
05_04_0173 + 18724367-18724476,18724570-18724651,18724750-187248... 28 6.8
03_02_0367 + 7834072-7834479,7834555-7834779,7834858-7835082,783... 28 6.8
03_02_0119 - 5725588-5726688,5726793-5726894 28 6.8
02_05_1312 + 35642687-35642923,35643712-35643831,35644468-356445... 28 6.8
02_05_0466 + 29278009-29278575 28 6.8
01_07_0203 - 41968071-41968154,41969499-41969858,41969946-41970248 28 6.8
01_06_0352 + 28638453-28639391,28639486-28640034,28640388-286411... 28 6.8
01_01_0516 + 3778891-3779069,3779436-3779541,3780526-3780888 28 6.8
01_01_0366 + 2871188-2871655 28 6.8
01_01_0364 - 2856598-2857059 28 6.8
01_01_0362 - 2843659-2844468,2844669-2844699,2844824-2844903,284... 28 6.8
01_01_0360 - 2837046-2837507 28 6.8
12_02_0398 - 18586985-18587480,18587669-18587687,18588317-185885... 28 9.0
11_06_0657 + 25938382-25938443,25938511-25938718,25939222-259392... 28 9.0
11_03_0177 + 11269754-11270320,11271701-11272180,11272663-112732... 28 9.0
09_04_0374 + 17051995-17052493,17053026-17053240 28 9.0
03_02_0983 - 12933082-12934884,12935669-12936487,12936754-129367... 28 9.0
>05_04_0255 + 19462668-19462695,19463443-19464491
Length = 358
Score = 187 bits (456), Expect = 7e-48
Identities = 94/157 (59%), Positives = 112/157 (71%)
Frame = +3
Query: 195 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 374
++EL K A I P KGILAADESTGT+GKR I VEN EENRR R+LLF + L +
Sbjct: 9 KDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFCTPGAL-Q 67
Query: 375 NISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLA 554
+SGVILF ETLYQK DG P V +L++ G++PGIKVDKG + + G+E E TTQG DDL
Sbjct: 68 YLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTIEVAGTEKETTTQGHDDLG 127
Query: 555 QRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENAQ 665
+RCA+Y + G FAKWR VLKIG N PS AI NAQ
Sbjct: 128 KRCAKYYEAGARFAKWRAVLKIGPNEPSQLAIDLNAQ 164
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1
Query: 670 LARYASICQSQRIVPIVEPRSL 735
LARYA ICQ +VPIVEP L
Sbjct: 166 LARYAIICQENGLVPIVEPEIL 187
>01_06_1721 - 39426957-39428005,39428812-39428839
Length = 358
Score = 186 bits (454), Expect = 1e-47
Identities = 93/157 (59%), Positives = 113/157 (71%)
Frame = +3
Query: 195 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 374
++EL K A I P KGILAADESTGT+GKR I VEN EENRR R+LLF++ L +
Sbjct: 9 KDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFTTPGAL-Q 67
Query: 375 NISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLA 554
++SGVILF ETLYQK DG P V +L++ G++PGIKVDKG V + G+ E TTQG DDL
Sbjct: 68 HLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTVEVAGTNKETTTQGHDDLG 127
Query: 555 QRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENAQ 665
+RCA+Y + G FAKWR VLKIG N PS +I NAQ
Sbjct: 128 KRCAKYYEAGARFAKWRAVLKIGPNEPSQLSIDLNAQ 164
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1
Query: 670 LARYASICQSQRIVPIVEPRSL 735
LARYA ICQ +VPIVEP L
Sbjct: 166 LARYAIICQENGLVPIVEPEIL 187
>08_01_0142 - 1121762-1122822,1123087-1123114
Length = 362
Score = 175 bits (425), Expect = 4e-44
Identities = 91/159 (57%), Positives = 109/159 (68%), Gaps = 2/159 (1%)
Frame = +3
Query: 195 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 374
++EL + A I P KGILAADESTGT+GKRL IGVEN EENRR R+LLF++ L +
Sbjct: 9 KDELIRNAAYIGTPGKGILAADESTGTIGKRLASIGVENVEENRRALRELLFTAPGAL-D 67
Query: 375 NISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLA 554
+SGVILF ETLYQ DGTP V +L G++ GIKVDKG V L G++ E TTQG D L
Sbjct: 68 CLSGVILFEETLYQSTRDGTPFVDVLAAAGVLAGIKVDKGTVELAGTDRETTTQGHDGLG 127
Query: 555 QRCAQYKKDGCHFAKWRCVLKIGR--NTPSYQAIQENAQ 665
+RC +Y G FAKWR VL IGR + PS A+ NAQ
Sbjct: 128 ERCRRYYAAGARFAKWRAVLSIGRASSRPSQLAVDANAQ 166
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1
Query: 670 LARYASICQSQRIVPIVEPRSL 735
LARYA ICQ +VPIVEP L
Sbjct: 168 LARYAIICQENGLVPIVEPEIL 189
>06_03_0718 +
23840198-23840409,23841368-23841518,23842190-23842294,
23843476-23843608,23844164-23844849,23844937-23845299
Length = 549
Score = 174 bits (424), Expect = 5e-44
Identities = 88/156 (56%), Positives = 108/156 (69%), Gaps = 1/156 (0%)
Frame = +3
Query: 201 ELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENI 380
EL K A+ I P KGILAADESTGT+GKRL I VEN E NR+ R+LLF++ + +
Sbjct: 202 ELIKTAKYIATPGKGILAADESTGTIGKRLASINVENVEPNRQALRELLFTTPGAF-QYL 260
Query: 381 SGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQR 560
SGVILF ETLYQ GTP V +L+ G++PGIKVDKG V + G+ E TTQGLD L R
Sbjct: 261 SGVILFEETLYQSTAAGTPFVDVLKAGGVVPGIKVDKGTVDIAGTNGETTTQGLDSLGAR 320
Query: 561 CAQYKKDGCHFAKWRCVLKIG-RNTPSYQAIQENAQ 665
CA+Y + G FAKWR VLKIG PS A+++NA+
Sbjct: 321 CAKYYEAGARFAKWRAVLKIGAAGEPSELAVKQNAE 356
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/39 (48%), Positives = 22/39 (56%)
Frame = +1
Query: 622 AATPPRTKLSRKTPNVLARYASICQSQRIVPIVEPRSLT 738
AA P ++ LARYA ICQ +VPIVEP LT
Sbjct: 342 AAGEPSELAVKQNAEGLARYALICQENGLVPIVEPEILT 380
>11_01_0448 -
3469398-3469676,3470015-3470284,3470386-3470476,
3470581-3470690,3470867-3471136,3471768-3471914
Length = 388
Score = 159 bits (385), Expect = 3e-39
Identities = 84/155 (54%), Positives = 104/155 (67%)
Frame = +3
Query: 198 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSEN 377
+EL K A+ I +P +GILA DES T GKRL IG+ENTE NR+ YR LL ++ L +
Sbjct: 43 DELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQY 101
Query: 378 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 557
ISG ILF ETLYQ DG +V +L ++ I+PGIKVDKG+VPL GS +E QGLD LA
Sbjct: 102 ISGAILFEETLYQSTVDGKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLAS 161
Query: 558 RCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA 662
R A Y + G FAKWR V+ I N PS A++E A
Sbjct: 162 REAAYYQQGARFAKWRTVVSI-PNGPSELAVKEAA 195
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 670 LARYASICQSQRIVPIVEPRSL 735
LARYA+I Q +VPIVEP L
Sbjct: 198 LARYAAISQDNGLVPIVEPEIL 219
>12_01_0448 +
3537661-3538018,3538920-3539047,3539740-3539763,
3542051-3542317,3542994-3543530
Length = 437
Score = 79.4 bits (187), Expect = 3e-15
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +3
Query: 279 GKRLQDIGVE-NTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLE 455
G+ +D+ E + NR+ YR LL ++ L + ISG ILF ETLYQ DG +V +L
Sbjct: 176 GRVERDVREEAGVDRNRQAYRTLLVTAPG-LGQYISGAILFEETLYQSTVDGRRIVDVLA 234
Query: 456 KKGIIPGIKVDKGVVPLFGSEDECTTQGL 542
++GI+PGI VDKG+VPL GS+ E GL
Sbjct: 235 EQGIVPGINVDKGLVPLAGSDPESLEDGL 263
>07_03_1705 +
28848293-28848321,28848766-28848841,28848940-28849082,
28849297-28849383,28849492-28849575,28850224-28850380,
28850521-28850606,28850995-28851226,28851351-28851471,
28851610-28851746,28852086-28852202,28852612-28852660,
28852751-28852793,28852945-28853116,28853192-28853262,
28853365-28853458,28853608-28853820,28853851-28853859,
28853895-28853999,28854266-28854586,28854664-28854789
Length = 823
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 474 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCH 590
G+ ++ V GS+ EC + LD+L YKK+GC+
Sbjct: 782 GVSLEDVVKHFNGSKRECVVEMLDNLEGNFLVYKKNGCY 820
>06_01_0093 - 776567-777335,777449-777747
Length = 355
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -2
Query: 538 PWVVHSSSDPNSGTTPLSTLMPGMM 464
P+ HSSSDP S + PL +L+P M+
Sbjct: 67 PYSHHSSSDPMSASNPLVSLLPAMV 91
>05_02_0156 + 7163756-7163834,7165447-7166225
Length = 285
Score = 31.9 bits (69), Expect = 0.55
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 467 HPRHQGRQGCRPAVRIGRRM-HHPGSGRPRPALRPVQEGRLPLRQ 598
HPRH+ R+ P R R + H G P PALRP RLP R+
Sbjct: 96 HPRHRRRRAAPPRPRRLRPVGHRKAPGDPLPALRP---RRLPGRR 137
>03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968
Length = 800
Score = 31.9 bits (69), Expect = 0.55
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +3
Query: 282 KRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKK 461
+R Q I V N+ + + +L+ + + V + +I+ TL+Q + DG P+ LL+
Sbjct: 582 RRSQFIDVFNSSPDETAFFRLMLNREGV----VGSLIMIQPTLFQYSFDGPPIPVLLDVS 637
Query: 462 GIIPGI 479
I P +
Sbjct: 638 SISPDV 643
>05_07_0146 +
28018236-28018580,28018670-28018777,28018984-28019148,
28019269-28019736,28019823-28019936,28020038-28020715
Length = 625
Score = 31.1 bits (67), Expect = 0.96
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +2
Query: 464 HHPRHQGRQ-GCRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDRPQHPLV 640
HHP H GR+ G PA HH P P P Q+ +LP L A+ P+ +
Sbjct: 282 HHPIHGGRERGSSPA-EADHHRHHQQEQPPPP---PQQQQQLP--PSWLPADKVPR--FL 333
Query: 641 PSYPGKRPMFSPATLPSVRANASCRLSSPEV 733
P G P+ AT+ R + R +P +
Sbjct: 334 PG-KGPEPVPEAATMRKARVSVRARSDAPMI 363
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 31.1 bits (67), Expect = 0.96
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +2
Query: 500 PAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDRPQHPLVPSYPGK-RPM-FS 673
P IG PG+G P G P V + P PLVP+ P PM F
Sbjct: 512 PTPSIGTSPSTPGTGGGYYPPSPSTGGYTPTPDVPISTPSSPYSPLVPTPPSSTTPMPFD 571
Query: 674 PATLP 688
P T P
Sbjct: 572 PNTAP 576
>01_04_0116 + 16189250-16189411,16189577-16190104
Length = 229
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +2
Query: 584 LPLRQVALRAEDRPQHPLVPSYPGKRPMFSPATLPSVRANASCRLSSP 727
+PL + + +P PLV S+ + P FSP LP V A CR P
Sbjct: 1 MPLPSLTVNESSQPP-PLVVSH--RLPSFSPPPLPPVSGTALCRHHRP 45
>07_01_1073 + 9566727-9566963,9566992-9567180
Length = 141
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -3
Query: 642 GTRGCCGRSSARNATWRSGSRPSCTGRSAGRGRP 541
GT CG S + TW GSR R RG P
Sbjct: 78 GTSDGCGSGSGEDGTWSGGSREDGQRRCRCRGSP 111
>04_01_0610 -
7997406-7998047,7998379-7998426,8000719-8001143,
8002301-8002589
Length = 467
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +2
Query: 470 PRHQGRQGCRPAVRIGRRMHHPGSGRPR---PALRPVQEG 580
PRH R CRP R H P RPR P RP + G
Sbjct: 402 PRHPPRPWCRPHTPRPRSPHSPTHPRPRLHHPLPRPTRTG 441
>02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,
8509204-8509553,8509631-8509729,8509811-8510105,
8510200-8510405,8510498-8510689,8510766-8511163,
8511258-8511444,8511473-8511528,8511800-8511872,
8512012-8512872,8514353-8514778
Length = 1134
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/63 (34%), Positives = 26/63 (41%)
Frame = +2
Query: 548 PRPALRPVQEGRLPLRQVALRAEDRPQHPLVPSYPGKRPMFSPATLPSVRANASCRLSSP 727
PRP R + G P Q A A RP+ P S PG + + P A S S P
Sbjct: 1039 PRPRTRGRRRGPSPAIQKACWAGPRPKRPSPTSAPGGLALSVARSAPLWLALRSKPASHP 1098
Query: 728 EVL 736
E L
Sbjct: 1099 EAL 1101
>04_04_1463 + 33787799-33787973,33788669-33789096
Length = 200
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 727 GARQSARCVGSDRWKRSGREHWAFSWIAWYEG 632
GAR G D +R GRE+W WI+ EG
Sbjct: 147 GARAPGDDGGGDVHRRDGRENWRRRWISRSEG 178
>06_03_0810 -
24817268-24817350,24817547-24817697,24818441-24818542,
24818722-24818802,24818900-24819020,24819284-24819401,
24819514-24819637,24819898-24819963,24820117-24820407,
24820455-24820592,24820967-24821116,24821240-24821410,
24821543-24821746,24821880-24822104,24822461-24822595,
24822995-24823096,24823586-24823882,24823979-24824167,
24824581-24824628,24824872-24825070,24825501-24825730,
24826373-24826568,24826695-24826882
Length = 1202
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/64 (31%), Positives = 26/64 (40%)
Frame = +2
Query: 485 RQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDRPQHPLVPSYPGKRP 664
R+GC GRR PG R P P G L A+ R +H L + P +
Sbjct: 85 REGCLSCFPRGRRRGRPGLARFAPCALPHTYGLSSLHSGLTGAKIRRRHVLHAAGPDEPH 144
Query: 665 MFSP 676
+ SP
Sbjct: 145 VASP 148
>06_02_0363 - 15172528-15173224,15174564-15174856
Length = 329
Score = 29.5 bits (63), Expect = 2.9
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +2
Query: 494 CRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDRPQHPL--VPSYPGKRPM 667
CRPA +G SGR P +E RLP R ALR RP+H L S + P
Sbjct: 244 CRPATDLGASPPSL-SGRSAPTPPQARELRLPRRPGALR---RPRHGLGGFASLIVRVPF 299
Query: 668 FSPATLPSVRANASCRLSSP 727
AT ++S SSP
Sbjct: 300 ADLATDSGASPHSSSGWSSP 319
>12_02_0167 -
14824241-14824279,14824385-14824423,14824509-14824797,
14824898-14824991,14825129-14825639,14825751-14826014,
14826103-14826549,14826628-14826801,14827003-14827323
Length = 725
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 411 YQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKK 578
YQK DDGT + E +G+ IK + V S++ C+ + DDL + K+
Sbjct: 143 YQKNDDGTIFMPNAEDQGLYEAIK--ELVAEQQASQEACSQRREDDLPTKALGNKE 196
>11_03_0208 - 11682869-11683459
Length = 196
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/63 (38%), Positives = 31/63 (49%)
Frame = +2
Query: 446 PAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDRP 625
P + HH R + R+ CR + HH G GR PA RP +EG R+V + RP
Sbjct: 5 PLPDAEHHRRPRRRRSCRSHL----HSHHRG-GR-APARRP-REG-CQCRRVLHQVPPRP 56
Query: 626 QHP 634
Q P
Sbjct: 57 QAP 59
>10_05_0101 -
9167383-9167679,9167883-9167961,9168161-9168326,
9169201-9169299,9169969-9171361
Length = 677
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 570 YKKDGCHFAKWRCVLKIGRNTPSYQAIQENAQCSR 674
Y C FAK RC+L++ P+ A + C+R
Sbjct: 463 YHVGTCTFAKKRCILRLYSIVPTDHAFKTQGSCTR 497
>02_05_1121 +
34262019-34262040,34262144-34262211,34262909-34263067,
34263146-34263313,34264125-34264278,34264845-34264924,
34265567-34265839,34265956-34266099,34266750-34266884,
34266994-34267092,34267530-34267586,34267673-34267877,
34268159-34268277,34268779-34268877,34268964-34269203
Length = 673
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +3
Query: 246 ILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKA 422
ILA++E++ GK+ +D +++ + LL +LSE +S + H L QKA
Sbjct: 515 ILASNENSRRKGKKKKDHSKDSSRDTAFPSSCLLLQCYVLLSEGLSMRFIQHFDLLQKA 573
>08_02_0574 - 18867623-18868033,18869751-18870209
Length = 289
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -3
Query: 630 CCGRSSARNATWRSGSR--PSCTGRSAGRGRP 541
C G S+ +A + +R P+CTGRS+ G P
Sbjct: 90 CAGSSTTASAPTSTSTRAAPACTGRSSSTGLP 121
>12_02_1168 +
26651863-26651974,26652087-26652290,26652392-26652542,
26653355-26653399,26653528-26653598,26653678-26653763,
26653976-26654078,26654300-26654406
Length = 292
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/86 (20%), Positives = 34/86 (39%)
Frame = +3
Query: 144 AISATMSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEEN 323
AI A+ Y + P + Q ++ ++D++ G + D+G
Sbjct: 201 AIKASKEEYEKLPPYMKTLATWEELQEAISKLNSYFSSDKTQGNVALNQDDVGEIGLGRK 260
Query: 324 RRRYRQLLFSSDAVLSENISGVILFH 401
R Y +L + + ENI G I ++
Sbjct: 261 GRSYLLILLRMNQLAMENIDGSIFYN 286
>10_06_0002 +
9382559-9382937,9383008-9383180,9386752-9386901,
9387180-9387325,9387416-9387572,9387720-9387778,
9388204-9388360,9389001-9389150,9389280-9389416,
9390071-9390217,9390292-9390393,9390742-9390799,
9391997-9392034,9392124-9392250,9392320-9392493,
9393125-9393256,9393940-9394049,9394752-9394812,
9395036-9395213,9395326-9395531,9395796-9395915,
9396496-9396594,9396983-9397204,9397482-9397621,
9397741-9397852,9398021-9398071,9398151-9398240,
9398397-9398567,9398663-9398815,9399774-9399950,
9400045-9400182,9400295-9400365,9400739-9400838,
9401324-9401380,9401469-9401525,9401619-9401699,
9401782-9401864,9401975-9402110
Length = 1632
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 615 SARNATWRSGSRPSCTGRSAGRGRPDPGW 529
+A++A WR G RP+ T GR + + W
Sbjct: 27 TAKDARWRGGQRPAATPADEGRSQ-EAAW 54
>05_04_0173 +
18724367-18724476,18724570-18724651,18724750-18724840,
18725060-18725172,18725270-18725342,18725445-18725565,
18725665-18725782,18726609-18726748,18726824-18726881,
18727007-18727077,18727181-18727733
Length = 509
Score = 28.3 bits (60), Expect = 6.8
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 3/97 (3%)
Frame = +2
Query: 374 EHLWCDPVPRDPLPEG*RWNASGLPAGEEGHH-PRHQGRQGCRPAVRIGRRM--HHPGSG 544
E+ W DP+P DP LP E H + RQ R A +R HP
Sbjct: 313 EYFWSDPLPCDP---------KSLPKYESSHEFQTKKKRQQMRQADEAAKRQKTQHP--- 360
Query: 545 RPRPALRPVQEGRLPLRQVALRAEDRPQHPLVPSYPG 655
+P L P+Q+ P Q+ H + + PG
Sbjct: 361 QPHGRLPPIQQTGQPHPQIRPGQPMNNPHAPMAAGPG 397
>03_02_0367 +
7834072-7834479,7834555-7834779,7834858-7835082,
7835333-7836219,7836298-7836468,7836551-7836839,
7836925-7836963,7837069-7837107
Length = 760
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 405 TLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKK 578
T YQK DDGT ++ E + + IK + V S++ C+ + DDL + K+
Sbjct: 187 TRYQKKDDGTIIMPNPEDQRVYEAIK--ELVADQQASQEACSQRREDDLLMKALGNKE 242
>03_02_0119 - 5725588-5726688,5726793-5726894
Length = 400
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 600 TWRSGSRPSCTGRSAGRGRPDPGWCIRL 517
T + ++P TG G GRP PG C+ L
Sbjct: 364 TTTTPAKPPLTGPRGGDGRPLPGGCLTL 391
>02_05_1312 +
35642687-35642923,35643712-35643831,35644468-35644534,
35644673-35644694,35645053-35645152,35645282-35645414,
35645483-35645517,35645708-35646409,35646789-35647121,
35647337-35647601,35647665-35647999,35648105-35648177,
35648271-35648356,35648479-35648598,35648674-35648741,
35648825-35648882
Length = 917
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 449 AGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGR-LPLRQVALRAEDRP 625
+GEE R G+Q R + GRR + + RP PA+RP +EGR + R ALR P
Sbjct: 14 SGEEAK--RKSGKQ--RGSGAKGRRRNGDRAFRP-PAMRPEEEGRGVATRPGALRERKPP 68
>02_05_0466 + 29278009-29278575
Length = 188
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 458 EGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRP 556
+GH +HQ Q + G HHP G P P
Sbjct: 129 KGHQQQHQQHQHQHHPQQHGMPQHHPQHGMPMP 161
>01_07_0203 - 41968071-41968154,41969499-41969858,41969946-41970248
Length = 248
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +3
Query: 51 KLMHGGIES---KLFNRLNINSPCV*TNADHTSK-AISATMSTYFQYPTPELQEELKKI 215
KL H E K N L + + +ADHT K +I T+S +Y PELQ++++ +
Sbjct: 70 KLSHNAYERDRRKQLNELYSSLRALLPDADHTKKLSIPTTVSRVLKY-IPELQKQVENL 127
>01_06_0352 +
28638453-28639391,28639486-28640034,28640388-28641195,
28641279-28641389,28641556-28641683
Length = 844
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = -3
Query: 675 GENIGRFPG*LGTRGCCGRSSARNATWRSGSRPSCTGRSAGRGRPDPGWCIRLPIRT 505
G N G G +G G SS+ AT R R T R RGR GW + + T
Sbjct: 124 GGNGGSSSG-IGGGGPGRGSSSSGATGRRRQRAMATNRGRDRGRGGRGWRVPRSVGT 179
>01_01_0516 + 3778891-3779069,3779436-3779541,3780526-3780888
Length = 215
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -2
Query: 295 SCKRFPIVPVDSSAARIPFAG 233
+C + P+VP+D++AA FAG
Sbjct: 142 TCDKLPVVPLDAAAAHSIFAG 162
>01_01_0366 + 2871188-2871655
Length = 155
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = -3
Query: 456 SPAGR-PEAFHRQPSGKGSRGTG 391
+PAG+ P+A R P+GKG +G+G
Sbjct: 27 APAGKKPKAEKRLPAGKGEKGSG 49
>01_01_0364 - 2856598-2857059
Length = 153
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = -3
Query: 456 SPAGR-PEAFHRQPSGKGSRGTG 391
+PAG+ P+A R P+GKG +G+G
Sbjct: 27 APAGKKPKAEKRLPAGKGEKGSG 49
>01_01_0362 -
2843659-2844468,2844669-2844699,2844824-2844903,
2846680-2847831
Length = 690
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = -3
Query: 456 SPAGR-PEAFHRQPSGKGSRGTG 391
+PAG+ P+A R P+GKG +G+G
Sbjct: 564 APAGKKPKAEKRLPAGKGEKGSG 586
>01_01_0360 - 2837046-2837507
Length = 153
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = -3
Query: 456 SPAGR-PEAFHRQPSGKGSRGTG 391
+PAG+ P+A R P+GKG +G+G
Sbjct: 27 APAGKKPKAEKRLPAGKGEKGSG 49
>12_02_0398 -
18586985-18587480,18587669-18587687,18588317-18588544,
18589699-18589966
Length = 336
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -3
Query: 687 GSVAGENIGRFPG*LGT--RGCCGRSSARNATWRSGSRPSCTGRSAGRGRPDPG 532
G G GR G R GR + +A G+ CTGR + RP PG
Sbjct: 48 GDATGRRRGRVSGDFPAKRRADRGRGGSCDAGRGGGAAGGCTGRDSDFTRPPPG 101
>11_06_0657 +
25938382-25938443,25938511-25938718,25939222-25939268,
25939473-25939805,25940529-25940613,25940689-25940884,
25941012-25941182,25941261-25941318,25941429-25941657,
25942296-25943183
Length = 758
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = -2
Query: 664 WAFSWIA---WYEGVLRPIFSTQRHLAKWQPSFLYWAQRWARSSRPWVVHSSSDPN 506
W W+A W L P+ A +F + +R R + WV + DPN
Sbjct: 622 WTSDWLAARGWQNNGLCPLCRETNETACHLVAFCRYTRRIWRLTASWVAYQQLDPN 677
>11_03_0177 +
11269754-11270320,11271701-11272180,11272663-11273292,
11273377-11273443,11273510-11273620,11273696-11275206
Length = 1121
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 527 HHPGSGRPRPALRPVQEGRLPLRQVALRAEDRPQHPLVPSYPG 655
H PG A ++EG LR+ A + RPQ P V PG
Sbjct: 67 HLPGGDGYVVAYTTLEEGGAALREEARARDVRPQPPPVAGAPG 109
>09_04_0374 + 17051995-17052493,17053026-17053240
Length = 237
Score = 27.9 bits (59), Expect = 9.0
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 8/65 (12%)
Frame = +2
Query: 536 GSGRPRPALRPVQEGRLPLRQVA----LRAEDRPQH----PLVPSYPGKRPMFSPATLPS 691
G GRPRP R GR R A + A RP+ PL+PS K + S P
Sbjct: 85 GGGRPRPGRRSTTTGRPAARAEAVAGVVAATRRPRRRQLLPLLPSTSLKLGLLSQVRWPG 144
Query: 692 VRANA 706
R A
Sbjct: 145 RRRGA 149
>03_02_0983 -
12933082-12934884,12935669-12936487,12936754-12936795,
12937116-12937244
Length = 930
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -2
Query: 595 AKWQPSFLYWAQRWARS-SRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRG 434
+K + + L+W W R +R W +D ++ L ++PG+ F S T+G
Sbjct: 416 SKTRSNDLFWEAVWPRLLARGWHSEKPNDVSTTKNCLVFIVPGIQRFSRSELTKG 470
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,089,082
Number of Sequences: 37544
Number of extensions: 544013
Number of successful extensions: 1912
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1903
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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