BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0962 (740 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 233 1e-61 D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 233 1e-61 U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 188 5e-48 U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 188 5e-48 D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 188 5e-48 AF100656-5|AAF99963.2| 259|Caenorhabditis elegans Hypothetical ... 31 1.1 AF016439-1|AAB65898.3| 721|Caenorhabditis elegans Hypothetical ... 30 2.0 AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical... 29 3.5 AL110490-11|CAB54452.1| 620|Caenorhabditis elegans Hypothetical... 29 3.5 Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 29 4.6 Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 4.6 Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 4.6 U97549-4|AAO91736.1| 460|Caenorhabditis elegans Dopamine recept... 28 6.0 U97549-3|AAO91737.1| 402|Caenorhabditis elegans Dopamine recept... 28 6.0 U97549-2|AAO91738.1| 399|Caenorhabditis elegans Dopamine recept... 28 6.0 AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical ... 28 6.0 Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 28 8.0 U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 8.0 >Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical protein T05D4.1 protein. Length = 365 Score = 233 bits (569), Expect = 1e-61 Identities = 111/168 (66%), Positives = 133/168 (79%) Frame = +3 Query: 159 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 338 M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60 Query: 339 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 518 QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+ Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120 Query: 519 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA 662 E TTQGLDDL RCAQYKKDG FAKWRCV KI TPS A++E A Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIA 168 Score = 40.7 bits (91), Expect = 0.001 Identities = 22/39 (56%), Positives = 24/39 (61%) Frame = +1 Query: 619 SAATPPRTKLSRKTPNVLARYASICQSQRIVPIVEPRSL 735 S+ TP T L N LARYASICQ +VPIVEP L Sbjct: 155 SSTTPSVTALKEIASN-LARYASICQQNGLVPIVEPEIL 192 >D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 protein. Length = 366 Score = 233 bits (569), Expect = 1e-61 Identities = 111/168 (66%), Positives = 133/168 (79%) Frame = +3 Query: 159 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 338 M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60 Query: 339 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 518 QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+ Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120 Query: 519 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA 662 E TTQGLDDL RCAQYKKDG FAKWRCV KI TPS A++E A Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIA 168 Score = 41.1 bits (92), Expect = 8e-04 Identities = 20/39 (51%), Positives = 24/39 (61%) Frame = +1 Query: 619 SAATPPRTKLSRKTPNVLARYASICQSQRIVPIVEPRSL 735 S+ TP T L N+ +RYASICQ +VPIVEP L Sbjct: 155 SSTTPSVTALKEIASNLGSRYASICQQNGLVPIVEPEIL 193 >U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical protein F01F1.12a protein. Length = 366 Score = 188 bits (457), Expect = 5e-48 Identities = 94/160 (58%), Positives = 117/160 (73%) Frame = +3 Query: 183 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 362 T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++ Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72 Query: 363 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 542 L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131 Query: 543 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA 662 D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENA Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENA 171 Score = 40.3 bits (90), Expect = 0.001 Identities = 18/24 (75%), Positives = 20/24 (83%) Frame = +1 Query: 664 NVLARYASICQSQRIVPIVEPRSL 735 NVLARYASICQ+ +VPIVEP L Sbjct: 172 NVLARYASICQANGLVPIVEPEVL 195 >U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical protein F01F1.12b protein. Length = 259 Score = 188 bits (457), Expect = 5e-48 Identities = 94/160 (58%), Positives = 117/160 (73%) Frame = +3 Query: 183 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 362 T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++ Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72 Query: 363 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 542 L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131 Query: 543 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA 662 D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENA Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENA 171 Score = 40.3 bits (90), Expect = 0.001 Identities = 18/24 (75%), Positives = 20/24 (83%) Frame = +1 Query: 664 NVLARYASICQSQRIVPIVEPRSL 735 NVLARYASICQ+ +VPIVEP L Sbjct: 172 NVLARYASICQANGLVPIVEPEVL 195 >D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 protein. Length = 366 Score = 188 bits (457), Expect = 5e-48 Identities = 94/160 (58%), Positives = 117/160 (73%) Frame = +3 Query: 183 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 362 T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++ Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72 Query: 363 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 542 L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131 Query: 543 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA 662 D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENA Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENA 171 Score = 40.3 bits (90), Expect = 0.001 Identities = 18/24 (75%), Positives = 20/24 (83%) Frame = +1 Query: 664 NVLARYASICQSQRIVPIVEPRSL 735 NVLARYASICQ+ +VPIVEP L Sbjct: 172 NVLARYASICQANGLVPIVEPEVL 195 >AF100656-5|AAF99963.2| 259|Caenorhabditis elegans Hypothetical protein F49F1.6 protein. Length = 259 Score = 30.7 bits (66), Expect = 1.1 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = +2 Query: 584 LPLRQVALRAEDRPQHPLVPSYPGKRPMFSPATLPSVRANASCRLSSP 727 +P+ Q L +P +VPS K P + LPS C+ SSP Sbjct: 180 VPMAQTTLLTTVKPTTTVVPSTTTKLPATTTKKLPSTTPKPPCKDSSP 227 >AF016439-1|AAB65898.3| 721|Caenorhabditis elegans Hypothetical protein R02F11.2 protein. Length = 721 Score = 29.9 bits (64), Expect = 2.0 Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Frame = -3 Query: 729 SGLDNRHDALALTDGSVAGENIGRFPG*LGTRGCCGRSSARNATWRSGSRPSCTGRSAGR 550 S LDN L G A N G G G GR N G RPS +G AG Sbjct: 222 STLDNIFLPLLFFIGFAAAGNYGYSSS--GNGG--GRPRPGNGGGGGGVRPSNSGCDAGW 277 Query: 549 ---GRPDPGWCIRL 517 RP GWC+++ Sbjct: 278 RRFNRPSGGWCVKV 291 >AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical protein Y51H4A.16 protein. Length = 136 Score = 29.1 bits (62), Expect = 3.5 Identities = 16/63 (25%), Positives = 34/63 (53%) Frame = +3 Query: 477 IKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQE 656 ++V + V L + E T + L LAQ+ ++ +D W+C+ G +T + ++I+E Sbjct: 22 VRVVERAVALHKNSKEKTNEKL--LAQKSGKWARDAESRNTWKCIRAPGAHTHTGESIKE 79 Query: 657 NAQ 665 + + Sbjct: 80 STE 82 >AL110490-11|CAB54452.1| 620|Caenorhabditis elegans Hypothetical protein Y48B6A.12 protein. Length = 620 Score = 29.1 bits (62), Expect = 3.5 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%) Frame = +3 Query: 648 IQENAQCS-RPLRFHLSEPTHRADCRAPKSY 737 I+E A+ + RP+ F LS PT +A+C A +Y Sbjct: 430 IKEMARLNPRPIIFALSNPTSKAECTAETAY 460 >Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical protein T04H1.4b protein. Length = 1312 Score = 28.7 bits (61), Expect = 4.6 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%) Frame = +3 Query: 189 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 332 E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R Sbjct: 747 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 806 Query: 333 YRQLLFSSDA 362 Y QL+ SD+ Sbjct: 807 YEQLVSESDS 816 >Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical protein T04H1.4a protein. Length = 1298 Score = 28.7 bits (61), Expect = 4.6 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%) Frame = +3 Query: 189 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 332 E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792 Query: 333 YRQLLFSSDA 362 Y QL+ SD+ Sbjct: 793 YEQLVSESDS 802 >Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue ceRAD50 protein. Length = 1298 Score = 28.7 bits (61), Expect = 4.6 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%) Frame = +3 Query: 189 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 332 E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792 Query: 333 YRQLLFSSDA 362 Y QL+ SD+ Sbjct: 793 YEQLVSESDS 802 >U97549-4|AAO91736.1| 460|Caenorhabditis elegans Dopamine receptor protein 1, isoforma protein. Length = 460 Score = 28.3 bits (60), Expect = 6.0 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -3 Query: 138 MYDRRLFKRKENLYLTD*KVSTLYLRALI*LF 43 ++DR L K+ ENL+L VS L + L+ LF Sbjct: 31 LWDRSLRKQPENLFLVSLAVSDLLVSVLVMLF 62 >U97549-3|AAO91737.1| 402|Caenorhabditis elegans Dopamine receptor protein 1, isoformb protein. Length = 402 Score = 28.3 bits (60), Expect = 6.0 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -3 Query: 138 MYDRRLFKRKENLYLTD*KVSTLYLRALI*LF 43 ++DR L K+ ENL+L VS L + L+ LF Sbjct: 31 LWDRSLRKQPENLFLVSLAVSDLLVSVLVMLF 62 >U97549-2|AAO91738.1| 399|Caenorhabditis elegans Dopamine receptor protein 1, isoformc protein. Length = 399 Score = 28.3 bits (60), Expect = 6.0 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -3 Query: 138 MYDRRLFKRKENLYLTD*KVSTLYLRALI*LF 43 ++DR L K+ ENL+L VS L + L+ LF Sbjct: 31 LWDRSLRKQPENLFLVSLAVSDLLVSVLVMLF 62 >AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical protein Y41D4A.8 protein. Length = 347 Score = 28.3 bits (60), Expect = 6.0 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = +3 Query: 426 DGTPLVSLLEKKGII--PGIKVDKGVVPLFGSEDECT 530 D +PLVS+L G+I P + + VPLF ED CT Sbjct: 10 DPSPLVSVL---GLIKSPDLMIGSTEVPLFEEEDMCT 43 >Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical protein T26E3.1 protein. Length = 233 Score = 27.9 bits (59), Expect = 8.0 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%) Frame = -3 Query: 606 NATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 517 N G RP+ G AG RP+ GWC+R+ Sbjct: 48 NGNGNGGGRPTNGGCDAGWRRFNRPNGGWCVRV 80 >U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical protein T19D12.1 protein. Length = 1844 Score = 27.9 bits (59), Expect = 8.0 Identities = 18/54 (33%), Positives = 26/54 (48%) Frame = -2 Query: 580 SFLYWAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRGVPSSA 419 S L +Q +S P VV SSS +S T ST+ P +S + PS++ Sbjct: 450 STLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTS 503 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,447,770 Number of Sequences: 27780 Number of extensions: 402918 Number of successful extensions: 1339 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1239 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1334 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1745954468 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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