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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0962
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81115-1|CAB03291.1|  365|Caenorhabditis elegans Hypothetical pr...   233   1e-61
D83738-1|BAA12091.1|  366|Caenorhabditis elegans aldolase Ce1 pr...   233   1e-61
U13070-15|AAC46646.1|  366|Caenorhabditis elegans Hypothetical p...   188   5e-48
U13070-14|AAM22057.1|  259|Caenorhabditis elegans Hypothetical p...   188   5e-48
D83739-1|BAA12092.1|  366|Caenorhabditis elegans aldolase Ce2 pr...   188   5e-48
AF100656-5|AAF99963.2|  259|Caenorhabditis elegans Hypothetical ...    31   1.1  
AF016439-1|AAB65898.3|  721|Caenorhabditis elegans Hypothetical ...    30   2.0  
AL132952-11|CAB61148.1|  136|Caenorhabditis elegans Hypothetical...    29   3.5  
AL110490-11|CAB54452.1|  620|Caenorhabditis elegans Hypothetical...    29   3.5  
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p...    29   4.6  
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue...    29   4.6  
U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine recept...    28   6.0  
U97549-3|AAO91737.1|  402|Caenorhabditis elegans Dopamine recept...    28   6.0  
U97549-2|AAO91738.1|  399|Caenorhabditis elegans Dopamine recept...    28   6.0  
AC024775-8|AAK68458.1|  347|Caenorhabditis elegans Hypothetical ...    28   6.0  
Z82053-1|CAB04834.1|  233|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    28   8.0  

>Z81115-1|CAB03291.1|  365|Caenorhabditis elegans Hypothetical
           protein T05D4.1 protein.
          Length = 365

 Score =  233 bits (569), Expect = 1e-61
 Identities = 111/168 (66%), Positives = 133/168 (79%)
 Frame = +3

Query: 159 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 338
           M++Y Q+ T   ++EL+ IA AIV P KGILAADESTG+M KRL  IG+ENTEENRR+YR
Sbjct: 1   MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60

Query: 339 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 518
           QLLF++ A L++ ISGVI+FHET YQK DDG P  +LL+++GIIPGIKVDKGVVP+ G+ 
Sbjct: 61  QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120

Query: 519 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA 662
            E TTQGLDDL  RCAQYKKDG  FAKWRCV KI   TPS  A++E A
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIA 168



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 22/39 (56%), Positives = 24/39 (61%)
 Frame = +1

Query: 619 SAATPPRTKLSRKTPNVLARYASICQSQRIVPIVEPRSL 735
           S+ TP  T L     N LARYASICQ   +VPIVEP  L
Sbjct: 155 SSTTPSVTALKEIASN-LARYASICQQNGLVPIVEPEIL 192


>D83738-1|BAA12091.1|  366|Caenorhabditis elegans aldolase Ce1
           protein.
          Length = 366

 Score =  233 bits (569), Expect = 1e-61
 Identities = 111/168 (66%), Positives = 133/168 (79%)
 Frame = +3

Query: 159 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 338
           M++Y Q+ T   ++EL+ IA AIV P KGILAADESTG+M KRL  IG+ENTEENRR+YR
Sbjct: 1   MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60

Query: 339 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 518
           QLLF++ A L++ ISGVI+FHET YQK DDG P  +LL+++GIIPGIKVDKGVVP+ G+ 
Sbjct: 61  QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120

Query: 519 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA 662
            E TTQGLDDL  RCAQYKKDG  FAKWRCV KI   TPS  A++E A
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIA 168



 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 20/39 (51%), Positives = 24/39 (61%)
 Frame = +1

Query: 619 SAATPPRTKLSRKTPNVLARYASICQSQRIVPIVEPRSL 735
           S+ TP  T L     N+ +RYASICQ   +VPIVEP  L
Sbjct: 155 SSTTPSVTALKEIASNLGSRYASICQQNGLVPIVEPEIL 193


>U13070-15|AAC46646.1|  366|Caenorhabditis elegans Hypothetical
           protein F01F1.12a protein.
          Length = 366

 Score =  188 bits (457), Expect = 5e-48
 Identities = 94/160 (58%), Positives = 117/160 (73%)
 Frame = +3

Query: 183 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 362
           T   ++EL +IA  IV   KGILAADESTGT+GKRL  I +EN E NR++YRQLLF++  
Sbjct: 13  TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72

Query: 363 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 542
            L+++ISGVIL+ ET +Q  D G     LL K+GI+PGIK+D GVVPL G+  E TTQGL
Sbjct: 73  -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131

Query: 543 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA 662
           D LA+R A +KK GC FAKWRCVL IG +TPS+  + ENA
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENA 171



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +1

Query: 664 NVLARYASICQSQRIVPIVEPRSL 735
           NVLARYASICQ+  +VPIVEP  L
Sbjct: 172 NVLARYASICQANGLVPIVEPEVL 195


>U13070-14|AAM22057.1|  259|Caenorhabditis elegans Hypothetical
           protein F01F1.12b protein.
          Length = 259

 Score =  188 bits (457), Expect = 5e-48
 Identities = 94/160 (58%), Positives = 117/160 (73%)
 Frame = +3

Query: 183 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 362
           T   ++EL +IA  IV   KGILAADESTGT+GKRL  I +EN E NR++YRQLLF++  
Sbjct: 13  TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72

Query: 363 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 542
            L+++ISGVIL+ ET +Q  D G     LL K+GI+PGIK+D GVVPL G+  E TTQGL
Sbjct: 73  -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131

Query: 543 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA 662
           D LA+R A +KK GC FAKWRCVL IG +TPS+  + ENA
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENA 171



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +1

Query: 664 NVLARYASICQSQRIVPIVEPRSL 735
           NVLARYASICQ+  +VPIVEP  L
Sbjct: 172 NVLARYASICQANGLVPIVEPEVL 195


>D83739-1|BAA12092.1|  366|Caenorhabditis elegans aldolase Ce2
           protein.
          Length = 366

 Score =  188 bits (457), Expect = 5e-48
 Identities = 94/160 (58%), Positives = 117/160 (73%)
 Frame = +3

Query: 183 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 362
           T   ++EL +IA  IV   KGILAADESTGT+GKRL  I +EN E NR++YRQLLF++  
Sbjct: 13  TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72

Query: 363 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 542
            L+++ISGVIL+ ET +Q  D G     LL K+GI+PGIK+D GVVPL G+  E TTQGL
Sbjct: 73  -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131

Query: 543 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA 662
           D LA+R A +KK GC FAKWRCVL IG +TPS+  + ENA
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENA 171



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +1

Query: 664 NVLARYASICQSQRIVPIVEPRSL 735
           NVLARYASICQ+  +VPIVEP  L
Sbjct: 172 NVLARYASICQANGLVPIVEPEVL 195


>AF100656-5|AAF99963.2|  259|Caenorhabditis elegans Hypothetical
           protein F49F1.6 protein.
          Length = 259

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +2

Query: 584 LPLRQVALRAEDRPQHPLVPSYPGKRPMFSPATLPSVRANASCRLSSP 727
           +P+ Q  L    +P   +VPS   K P  +   LPS      C+ SSP
Sbjct: 180 VPMAQTTLLTTVKPTTTVVPSTTTKLPATTTKKLPSTTPKPPCKDSSP 227


>AF016439-1|AAB65898.3|  721|Caenorhabditis elegans Hypothetical
           protein R02F11.2 protein.
          Length = 721

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
 Frame = -3

Query: 729 SGLDNRHDALALTDGSVAGENIGRFPG*LGTRGCCGRSSARNATWRSGSRPSCTGRSAGR 550
           S LDN    L    G  A  N G      G  G  GR    N     G RPS +G  AG 
Sbjct: 222 STLDNIFLPLLFFIGFAAAGNYGYSSS--GNGG--GRPRPGNGGGGGGVRPSNSGCDAGW 277

Query: 549 ---GRPDPGWCIRL 517
               RP  GWC+++
Sbjct: 278 RRFNRPSGGWCVKV 291


>AL132952-11|CAB61148.1|  136|Caenorhabditis elegans Hypothetical
           protein Y51H4A.16 protein.
          Length = 136

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/63 (25%), Positives = 34/63 (53%)
 Frame = +3

Query: 477 IKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQE 656
           ++V +  V L  +  E T + L  LAQ+  ++ +D      W+C+   G +T + ++I+E
Sbjct: 22  VRVVERAVALHKNSKEKTNEKL--LAQKSGKWARDAESRNTWKCIRAPGAHTHTGESIKE 79

Query: 657 NAQ 665
           + +
Sbjct: 80  STE 82


>AL110490-11|CAB54452.1|  620|Caenorhabditis elegans Hypothetical
           protein Y48B6A.12 protein.
          Length = 620

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +3

Query: 648 IQENAQCS-RPLRFHLSEPTHRADCRAPKSY 737
           I+E A+ + RP+ F LS PT +A+C A  +Y
Sbjct: 430 IKEMARLNPRPIIFALSNPTSKAECTAETAY 460


>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
           protein T04H1.4b protein.
          Length = 1312

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
 Frame = +3

Query: 189 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 332
           E++E+ +K++  +      +   ++   T+  +L+       D+GV     E TEEN +R
Sbjct: 747 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 806

Query: 333 YRQLLFSSDA 362
           Y QL+  SD+
Sbjct: 807 YEQLVSESDS 816


>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
           protein T04H1.4a protein.
          Length = 1298

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
 Frame = +3

Query: 189 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 332
           E++E+ +K++  +      +   ++   T+  +L+       D+GV     E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792

Query: 333 YRQLLFSSDA 362
           Y QL+  SD+
Sbjct: 793 YEQLVSESDS 802


>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
           ceRAD50 protein.
          Length = 1298

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
 Frame = +3

Query: 189 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 332
           E++E+ +K++  +      +   ++   T+  +L+       D+GV     E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792

Query: 333 YRQLLFSSDA 362
           Y QL+  SD+
Sbjct: 793 YEQLVSESDS 802


>U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine receptor
           protein 1, isoforma protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 138 MYDRRLFKRKENLYLTD*KVSTLYLRALI*LF 43
           ++DR L K+ ENL+L    VS L +  L+ LF
Sbjct: 31  LWDRSLRKQPENLFLVSLAVSDLLVSVLVMLF 62


>U97549-3|AAO91737.1|  402|Caenorhabditis elegans Dopamine receptor
           protein 1, isoformb protein.
          Length = 402

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 138 MYDRRLFKRKENLYLTD*KVSTLYLRALI*LF 43
           ++DR L K+ ENL+L    VS L +  L+ LF
Sbjct: 31  LWDRSLRKQPENLFLVSLAVSDLLVSVLVMLF 62


>U97549-2|AAO91738.1|  399|Caenorhabditis elegans Dopamine receptor
           protein 1, isoformc protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 138 MYDRRLFKRKENLYLTD*KVSTLYLRALI*LF 43
           ++DR L K+ ENL+L    VS L +  L+ LF
Sbjct: 31  LWDRSLRKQPENLFLVSLAVSDLLVSVLVMLF 62


>AC024775-8|AAK68458.1|  347|Caenorhabditis elegans Hypothetical
           protein Y41D4A.8 protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +3

Query: 426 DGTPLVSLLEKKGII--PGIKVDKGVVPLFGSEDECT 530
           D +PLVS+L   G+I  P + +    VPLF  ED CT
Sbjct: 10  DPSPLVSVL---GLIKSPDLMIGSTEVPLFEEEDMCT 43


>Z82053-1|CAB04834.1|  233|Caenorhabditis elegans Hypothetical
           protein T26E3.1 protein.
          Length = 233

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = -3

Query: 606 NATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 517
           N     G RP+  G  AG     RP+ GWC+R+
Sbjct: 48  NGNGNGGGRPTNGGCDAGWRRFNRPNGGWCVRV 80


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
           protein T19D12.1 protein.
          Length = 1844

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = -2

Query: 580 SFLYWAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRGVPSSA 419
           S L  +Q    +S P VV SSS  +S T   ST+ P      +S   +  PS++
Sbjct: 450 STLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTS 503


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,447,770
Number of Sequences: 27780
Number of extensions: 402918
Number of successful extensions: 1339
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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