Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0962
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 233 1e-61
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 233 1e-61
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 188 5e-48
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 188 5e-48
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 188 5e-48
AF100656-5|AAF99963.2| 259|Caenorhabditis elegans Hypothetical ... 31 1.1
AF016439-1|AAB65898.3| 721|Caenorhabditis elegans Hypothetical ... 30 2.0
AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical... 29 3.5
AL110490-11|CAB54452.1| 620|Caenorhabditis elegans Hypothetical... 29 3.5
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 29 4.6
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 4.6
U97549-4|AAO91736.1| 460|Caenorhabditis elegans Dopamine recept... 28 6.0
U97549-3|AAO91737.1| 402|Caenorhabditis elegans Dopamine recept... 28 6.0
U97549-2|AAO91738.1| 399|Caenorhabditis elegans Dopamine recept... 28 6.0
AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical ... 28 6.0
Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 28 8.0
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 8.0
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 233 bits (569), Expect = 1e-61
Identities = 111/168 (66%), Positives = 133/168 (79%)
Frame = +3
Query: 159 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 338
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 339 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 518
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 519 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA 662
E TTQGLDDL RCAQYKKDG FAKWRCV KI TPS A++E A
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIA 168
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/39 (56%), Positives = 24/39 (61%)
Frame = +1
Query: 619 SAATPPRTKLSRKTPNVLARYASICQSQRIVPIVEPRSL 735
S+ TP T L N LARYASICQ +VPIVEP L
Sbjct: 155 SSTTPSVTALKEIASN-LARYASICQQNGLVPIVEPEIL 192
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 233 bits (569), Expect = 1e-61
Identities = 111/168 (66%), Positives = 133/168 (79%)
Frame = +3
Query: 159 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 338
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 339 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 518
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 519 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA 662
E TTQGLDDL RCAQYKKDG FAKWRCV KI TPS A++E A
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIA 168
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1
Query: 619 SAATPPRTKLSRKTPNVLARYASICQSQRIVPIVEPRSL 735
S+ TP T L N+ +RYASICQ +VPIVEP L
Sbjct: 155 SSTTPSVTALKEIASNLGSRYASICQQNGLVPIVEPEIL 193
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 188 bits (457), Expect = 5e-48
Identities = 94/160 (58%), Positives = 117/160 (73%)
Frame = +3
Query: 183 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 362
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 363 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 542
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 543 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA 662
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENA
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENA 171
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +1
Query: 664 NVLARYASICQSQRIVPIVEPRSL 735
NVLARYASICQ+ +VPIVEP L
Sbjct: 172 NVLARYASICQANGLVPIVEPEVL 195
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 188 bits (457), Expect = 5e-48
Identities = 94/160 (58%), Positives = 117/160 (73%)
Frame = +3
Query: 183 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 362
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 363 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 542
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 543 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA 662
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENA
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENA 171
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +1
Query: 664 NVLARYASICQSQRIVPIVEPRSL 735
NVLARYASICQ+ +VPIVEP L
Sbjct: 172 NVLARYASICQANGLVPIVEPEVL 195
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 188 bits (457), Expect = 5e-48
Identities = 94/160 (58%), Positives = 117/160 (73%)
Frame = +3
Query: 183 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 362
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 363 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 542
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 543 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA 662
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENA
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENA 171
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +1
Query: 664 NVLARYASICQSQRIVPIVEPRSL 735
NVLARYASICQ+ +VPIVEP L
Sbjct: 172 NVLARYASICQANGLVPIVEPEVL 195
>AF100656-5|AAF99963.2| 259|Caenorhabditis elegans Hypothetical
protein F49F1.6 protein.
Length = 259
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 584 LPLRQVALRAEDRPQHPLVPSYPGKRPMFSPATLPSVRANASCRLSSP 727
+P+ Q L +P +VPS K P + LPS C+ SSP
Sbjct: 180 VPMAQTTLLTTVKPTTTVVPSTTTKLPATTTKKLPSTTPKPPCKDSSP 227
>AF016439-1|AAB65898.3| 721|Caenorhabditis elegans Hypothetical
protein R02F11.2 protein.
Length = 721
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = -3
Query: 729 SGLDNRHDALALTDGSVAGENIGRFPG*LGTRGCCGRSSARNATWRSGSRPSCTGRSAGR 550
S LDN L G A N G G G GR N G RPS +G AG
Sbjct: 222 STLDNIFLPLLFFIGFAAAGNYGYSSS--GNGG--GRPRPGNGGGGGGVRPSNSGCDAGW 277
Query: 549 ---GRPDPGWCIRL 517
RP GWC+++
Sbjct: 278 RRFNRPSGGWCVKV 291
>AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical
protein Y51H4A.16 protein.
Length = 136
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/63 (25%), Positives = 34/63 (53%)
Frame = +3
Query: 477 IKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQE 656
++V + V L + E T + L LAQ+ ++ +D W+C+ G +T + ++I+E
Sbjct: 22 VRVVERAVALHKNSKEKTNEKL--LAQKSGKWARDAESRNTWKCIRAPGAHTHTGESIKE 79
Query: 657 NAQ 665
+ +
Sbjct: 80 STE 82
>AL110490-11|CAB54452.1| 620|Caenorhabditis elegans Hypothetical
protein Y48B6A.12 protein.
Length = 620
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 648 IQENAQCS-RPLRFHLSEPTHRADCRAPKSY 737
I+E A+ + RP+ F LS PT +A+C A +Y
Sbjct: 430 IKEMARLNPRPIIFALSNPTSKAECTAETAY 460
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +3
Query: 189 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 332
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 747 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 806
Query: 333 YRQLLFSSDA 362
Y QL+ SD+
Sbjct: 807 YEQLVSESDS 816
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +3
Query: 189 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 332
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 333 YRQLLFSSDA 362
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +3
Query: 189 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 332
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 333 YRQLLFSSDA 362
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>U97549-4|AAO91736.1| 460|Caenorhabditis elegans Dopamine receptor
protein 1, isoforma protein.
Length = 460
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 138 MYDRRLFKRKENLYLTD*KVSTLYLRALI*LF 43
++DR L K+ ENL+L VS L + L+ LF
Sbjct: 31 LWDRSLRKQPENLFLVSLAVSDLLVSVLVMLF 62
>U97549-3|AAO91737.1| 402|Caenorhabditis elegans Dopamine receptor
protein 1, isoformb protein.
Length = 402
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 138 MYDRRLFKRKENLYLTD*KVSTLYLRALI*LF 43
++DR L K+ ENL+L VS L + L+ LF
Sbjct: 31 LWDRSLRKQPENLFLVSLAVSDLLVSVLVMLF 62
>U97549-2|AAO91738.1| 399|Caenorhabditis elegans Dopamine receptor
protein 1, isoformc protein.
Length = 399
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 138 MYDRRLFKRKENLYLTD*KVSTLYLRALI*LF 43
++DR L K+ ENL+L VS L + L+ LF
Sbjct: 31 LWDRSLRKQPENLFLVSLAVSDLLVSVLVMLF 62
>AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical
protein Y41D4A.8 protein.
Length = 347
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 426 DGTPLVSLLEKKGII--PGIKVDKGVVPLFGSEDECT 530
D +PLVS+L G+I P + + VPLF ED CT
Sbjct: 10 DPSPLVSVL---GLIKSPDLMIGSTEVPLFEEEDMCT 43
>Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical
protein T26E3.1 protein.
Length = 233
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -3
Query: 606 NATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 517
N G RP+ G AG RP+ GWC+R+
Sbjct: 48 NGNGNGGGRPTNGGCDAGWRRFNRPNGGWCVRV 80
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -2
Query: 580 SFLYWAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRGVPSSA 419
S L +Q +S P VV SSS +S T ST+ P +S + PS++
Sbjct: 450 STLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTS 503
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,447,770
Number of Sequences: 27780
Number of extensions: 402918
Number of successful extensions: 1339
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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