Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0961
         (600 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X51749-1|CAA36038.1|  687|Drosophila melanogaster protein ( Dros...    29   4.8  
X02974-1|CAA26716.2|  687|Drosophila melanogaster white pigment ...    29   4.8  
AL133506-2|CAB65847.1|  687|Drosophila melanogaster EG:BACN33B1....    29   4.8  
AE014298-466|AAF45826.1|  687|Drosophila melanogaster CG2759-PA ...    29   4.8  
AB028139-3|BAA78210.1|  706|Drosophila melanogaster white protei...    29   4.8  

>X51749-1|CAA36038.1|  687|Drosophila melanogaster protein (
           Drosophila white mRNAfor eye pigment. ).
          Length = 687

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 222 GEVSLDRNKRNCSNARKQLLESLNFGCTTRPFTTYDYLIYIV 347
           GE+S   +   C ++ K +LE+LNF     P       I IV
Sbjct: 628 GEISCTSSNTTCPSSGKVILETLNFSAADLPLDYVGLAILIV 669


>X02974-1|CAA26716.2|  687|Drosophila melanogaster white pigment
           protein protein.
          Length = 687

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 222 GEVSLDRNKRNCSNARKQLLESLNFGCTTRPFTTYDYLIYIV 347
           GE+S   +   C ++ K +LE+LNF     P       I IV
Sbjct: 628 GEISCTSSNTTCPSSGKVILETLNFSAADLPLDYVGLAILIV 669


>AL133506-2|CAB65847.1|  687|Drosophila melanogaster
           EG:BACN33B1.1,FBgn0003996;w protein.
          Length = 687

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 222 GEVSLDRNKRNCSNARKQLLESLNFGCTTRPFTTYDYLIYIV 347
           GE+S   +   C ++ K +LE+LNF     P       I IV
Sbjct: 628 GEISCTSSNTTCPSSGKVILETLNFSAADLPLDYVGLAILIV 669


>AE014298-466|AAF45826.1|  687|Drosophila melanogaster CG2759-PA
           protein.
          Length = 687

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 222 GEVSLDRNKRNCSNARKQLLESLNFGCTTRPFTTYDYLIYIV 347
           GE+S   +   C ++ K +LE+LNF     P       I IV
Sbjct: 628 GEISCTSSNTTCPSSGKVILETLNFSAADLPLDYVGLAILIV 669


>AB028139-3|BAA78210.1|  706|Drosophila melanogaster white protein
           protein.
          Length = 706

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 222 GEVSLDRNKRNCSNARKQLLESLNFGCTTRPFTTYDYLIYIV 347
           GE+S   +   C ++ K +LE+LNF     P       I IV
Sbjct: 647 GEISCTSSNTTCPSSGKVILETLNFSAADLPLDYVGLAILIV 688


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,702,684
Number of Sequences: 53049
Number of extensions: 624094
Number of successful extensions: 1500
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1494
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)