Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0961
(600 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 5.3
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 5.3
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 5.3
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 5.3
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 5.3
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 5.3
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 5.3
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 5.3
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 5.3
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 5.3
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 21 9.2
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 9.2
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 9.2
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 9.2
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 371 YTKYKHFFYNIN 336
Y YK +YNIN
Sbjct: 103 YNNYKKLYYNIN 114
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 371 YTKYKHFFYNIN 336
Y YK +YNIN
Sbjct: 103 YNNYKKLYYNIN 114
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 371 YTKYKHFFYNIN 336
Y YK +YNIN
Sbjct: 103 YNNYKKLYYNIN 114
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 371 YTKYKHFFYNIN 336
Y YK +YNIN
Sbjct: 103 YNNYKKLYYNIN 114
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 371 YTKYKHFFYNIN 336
Y YK +YNIN
Sbjct: 103 YNNYKKLYYNIN 114
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 371 YTKYKHFFYNIN 336
Y YK +YNIN
Sbjct: 103 YNNYKKLYYNIN 114
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 371 YTKYKHFFYNIN 336
Y YK +YNIN
Sbjct: 103 YNNYKKLYYNIN 114
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 371 YTKYKHFFYNIN 336
Y YK +YNIN
Sbjct: 103 YNNYKKLYYNIN 114
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 371 YTKYKHFFYNIN 336
Y YK +YNIN
Sbjct: 101 YNNYKKLYYNIN 112
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 371 YTKYKHFFYNIN 336
Y YK +YNIN
Sbjct: 111 YNNYKKLYYNIN 122
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.8 bits (44), Expect = 5.3
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -3
Query: 586 SNRQGLFYHHHHLRLSTGH**CTEHRPFQLMSWSAAGPLPPAS 458
+NR+G+ +HH + R T T + +L W P PP S
Sbjct: 235 TNRKGVVFHHDNARPHTSL--VTRQKLLEL-GWDVL-PHPPYS 273
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 21.0 bits (42), Expect = 9.2
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = +1
Query: 160 DCAALNKRRVQNNLAKLYNCSAK 228
+C+A++ V + K++ C K
Sbjct: 103 ECSAISDTNVHLKITKIFQCITK 125
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 377 LFYTKYKHFFYNIN 336
L+ YK +YNIN
Sbjct: 99 LYCNNYKKLYYNIN 112
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 377 LFYTKYKHFFYNIN 336
L+ YK +YNIN
Sbjct: 99 LYCNNYKKLYYNIN 112
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 458 QRDPVIFTKSSVHLVGDRP 402
Q+DPVIF+ S V RP
Sbjct: 1129 QKDPVIFSTSFDSKVMTRP 1147
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,705
Number of Sequences: 438
Number of extensions: 4306
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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