Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0960
(418 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031060-1|AAH31060.1| 852|Homo sapiens piwi-like 4 (Drosophila... 91 2e-18
AK093475-1|BAC04179.1| 852|Homo sapiens protein ( Homo sapiens ... 91 2e-18
AB079366-1|BAC81341.1| 852|Homo sapiens PIWIL1 protein. 91 2e-18
AK096837-1|BAC04873.1| 666|Homo sapiens protein ( Homo sapiens ... 90 3e-18
AK093133-1|BAC04068.1| 829|Homo sapiens protein ( Homo sapiens ... 85 9e-17
AF387507-1|AAK69348.1| 861|Homo sapiens PIWI protein protein. 85 9e-17
AF264004-1|AAK92281.1| 775|Homo sapiens HIWI protein. 85 9e-17
AF104260-1|AAC97371.2| 861|Homo sapiens HIWI protein. 85 9e-17
BC028581-1|AAH28581.1| 861|Homo sapiens piwi-like 1 (Drosophila... 83 5e-16
BC111751-1|AAI11752.1| 973|Homo sapiens piwi-like 2 (Drosophila... 81 2e-15
BC025995-1|AAH25995.1| 973|Homo sapiens piwi-like 2 (Drosophila... 81 2e-15
AK027497-1|BAB55155.1| 530|Homo sapiens protein ( Homo sapiens ... 81 2e-15
AB079367-1|BAC81342.1| 973|Homo sapiens PIWIL2 protein. 81 2e-15
AK001213-1|BAA91558.1| 371|Homo sapiens protein ( Homo sapiens ... 78 1e-14
AB079368-1|BAC81343.1| 882|Homo sapiens PIWIL3 protein. 56 4e-08
AF399636-1|AAK95121.1| 216|Homo sapiens olfactory receptor prot... 37 0.031
AB065852-1|BAC06070.1| 309|Homo sapiens seven transmembrane hel... 37 0.031
AB065740-1|BAC05961.1| 310|Homo sapiens seven transmembrane hel... 31 1.2
AB065541-1|BAC05786.1| 312|Homo sapiens seven transmembrane hel... 30 2.7
AB065545-1|BAC05790.1| 314|Homo sapiens seven transmembrane hel... 30 3.6
>BC031060-1|AAH31060.1| 852|Homo sapiens piwi-like 4 (Drosophila)
protein.
Length = 852
Score = 90.6 bits (215), Expect = 2e-18
Identities = 44/140 (31%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Frame = +2
Query: 2 MRSKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIE 181
+R+ +L LN+W+++ +R ESF++ + + G +GF + P ++ ++ + P
Sbjct: 473 IRTCKILNAQSLNTWLILCSDRTEYVAESFLNCLRRVAGSMGFNVDYPKIIKVQ-ENPAA 531
Query: 182 YANMCEEVIARKNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAM-S 358
+ ++ + + L++C+L N Y++IKK + D VP+Q V AR ++ + M S
Sbjct: 532 FVRAIQQYVD-PDVQLVMCILPSNQKTYYDSIKKYLSSDCPVPSQCVLARTLNKQGMMMS 590
Query: 359 IATKVAIQINCKLGGSPWTV 418
IATK+A+Q+ CKLGG W V
Sbjct: 591 IATKIAMQMTCKLGGELWAV 610
>AK093475-1|BAC04179.1| 852|Homo sapiens protein ( Homo sapiens
cDNA FLJ36156 fis, clone TESTI2025546, weakly similar to
Mus musculus mRNA for MIWI (piwi). ).
Length = 852
Score = 90.6 bits (215), Expect = 2e-18
Identities = 44/140 (31%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Frame = +2
Query: 2 MRSKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIE 181
+R+ +L LN+W+++ +R ESF++ + + G +GF + P ++ ++ + P
Sbjct: 473 IRTCKILNAQSLNTWLILCSDRTEYVAESFLNCLRRVAGSMGFNVDYPKIIKVQ-ENPAA 531
Query: 182 YANMCEEVIARKNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAM-S 358
+ ++ + + L++C+L N Y++IKK + D VP+Q V AR ++ + M S
Sbjct: 532 FVRAIQQYVD-PDVQLVMCILPSNQKTYYDSIKKYLSSDCPVPSQCVLARTLNKQGMMMS 590
Query: 359 IATKVAIQINCKLGGSPWTV 418
IATK+A+Q+ CKLGG W V
Sbjct: 591 IATKIAMQMTCKLGGELWAV 610
>AB079366-1|BAC81341.1| 852|Homo sapiens PIWIL1 protein.
Length = 852
Score = 90.6 bits (215), Expect = 2e-18
Identities = 44/140 (31%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Frame = +2
Query: 2 MRSKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIE 181
+R+ +L LN+W+++ +R ESF++ + + G +GF + P ++ ++ + P
Sbjct: 473 IRTCKILNAQSLNTWLILCSDRTEYVAESFLNCLRRVAGSMGFNVDYPKIIKVQ-ENPAA 531
Query: 182 YANMCEEVIARKNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAM-S 358
+ ++ + + L++C+L N Y++IKK + D VP+Q V AR ++ + M S
Sbjct: 532 FVRAIQQYVD-PDVQLVMCILPSNQKTYYDSIKKYLSSDCPVPSQCVLARTLNKQGMMMS 590
Query: 359 IATKVAIQINCKLGGSPWTV 418
IATK+A+Q+ CKLGG W V
Sbjct: 591 IATKIAMQMTCKLGGELWAV 610
>AK096837-1|BAC04873.1| 666|Homo sapiens protein ( Homo sapiens
cDNA FLJ39518 fis, clone PUAEN2001188, moderately
similar to Mus musculus mRNA for MIWI (piwi). ).
Length = 666
Score = 89.8 bits (213), Expect = 3e-18
Identities = 44/140 (31%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Frame = +2
Query: 2 MRSKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIE 181
+R+ +L LN+W+++ +R ESF++ + + G +GF + P ++ ++ + P
Sbjct: 287 IRTCKILNAQSLNTWLILCSDRTEYVAESFLNCLRRVTGSMGFNVDYPKIIKVQ-ENPAA 345
Query: 182 YANMCEEVIARKNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAM-S 358
+ ++ + + L++C+L N Y++IKK + D VP+Q V AR ++ + M S
Sbjct: 346 FVRAIQQYVD-PDVQLVMCILPSNQKTYYDSIKKYLSSDCPVPSQCVLARTLNKQGMMMS 404
Query: 359 IATKVAIQINCKLGGSPWTV 418
IATK+A+Q+ CKLGG W V
Sbjct: 405 IATKIAMQMTCKLGGELWAV 424
>AK093133-1|BAC04068.1| 829|Homo sapiens protein ( Homo sapiens
cDNA FLJ35814 fis, clone TESTI2006083, highly similar to
Mus musculus mRNA for MIWI (piwi). ).
Length = 829
Score = 85.0 bits (201), Expect = 9e-17
Identities = 43/139 (30%), Positives = 77/139 (55%), Gaps = 1/139 (0%)
Frame = +2
Query: 5 RSKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEY 184
R L+++ L++W++I R S I + K +G +MR ++ + D Y
Sbjct: 483 RGAPLISVKPLDNWLLIYTRRNYEAANSLIQNLFKVTPAMGMQMRKAIMIEV-DDRTEAY 541
Query: 185 ANMCEEVIARKNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSK-SAMSI 361
+ ++ + + +++C+L+ N D+Y+AIKK D P+Q V AR + + + M+I
Sbjct: 542 LRVLQQKVTA-DTQIVVCLLSSNRKDKYDAIKKYLCTDCPTPSQCVVARTLGKQQTVMAI 600
Query: 362 ATKVAIQINCKLGGSPWTV 418
ATK+A+Q+NCK+GG W V
Sbjct: 601 ATKIALQMNCKMGGELWRV 619
>AF387507-1|AAK69348.1| 861|Homo sapiens PIWI protein protein.
Length = 861
Score = 85.0 bits (201), Expect = 9e-17
Identities = 43/139 (30%), Positives = 77/139 (55%), Gaps = 1/139 (0%)
Frame = +2
Query: 5 RSKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEY 184
R L+++ L++W++I R S I + K +G +MR ++ + D Y
Sbjct: 483 RGAPLISVKPLDNWLLIYTRRNYEAANSLIQNLFKVTPAMGMQMRKAIMIEV-DDRTEAY 541
Query: 185 ANMCEEVIARKNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSK-SAMSI 361
+ ++ + + +++C+L+ N D+Y+AIKK D P+Q V AR + + + M+I
Sbjct: 542 LRVLQQKVTA-DTQIVVCLLSSNRKDKYDAIKKYLCTDCPTPSQCVVARTLGKQQTVMAI 600
Query: 362 ATKVAIQINCKLGGSPWTV 418
ATK+A+Q+NCK+GG W V
Sbjct: 601 ATKIALQMNCKMGGELWRV 619
>AF264004-1|AAK92281.1| 775|Homo sapiens HIWI protein.
Length = 775
Score = 85.0 bits (201), Expect = 9e-17
Identities = 43/139 (30%), Positives = 77/139 (55%), Gaps = 1/139 (0%)
Frame = +2
Query: 5 RSKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEY 184
R L+++ L++W++I R S I + K +G +MR ++ + D Y
Sbjct: 397 RGAPLISVKPLDNWLLIYTRRNYEAANSLIQNLFKVTPAMGMQMRKAIMIEV-DDRTEAY 455
Query: 185 ANMCEEVIARKNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSK-SAMSI 361
+ ++ + + +++C+L+ N D+Y+AIKK D P+Q V AR + + + M+I
Sbjct: 456 LRVLQQKVTA-DTQIVVCLLSSNRKDKYDAIKKYLCTDCPTPSQCVVARTLGKQQTVMAI 514
Query: 362 ATKVAIQINCKLGGSPWTV 418
ATK+A+Q+NCK+GG W V
Sbjct: 515 ATKIALQMNCKMGGELWRV 533
>AF104260-1|AAC97371.2| 861|Homo sapiens HIWI protein.
Length = 861
Score = 85.0 bits (201), Expect = 9e-17
Identities = 43/139 (30%), Positives = 77/139 (55%), Gaps = 1/139 (0%)
Frame = +2
Query: 5 RSKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEY 184
R L+++ L++W++I R S I + K +G +MR ++ + D Y
Sbjct: 483 RGAPLISVKPLDNWLLIYTRRNYEAANSLIQNLFKVTPAMGMQMRKAIMIEV-DDRTEAY 541
Query: 185 ANMCEEVIARKNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSK-SAMSI 361
+ ++ + + +++C+L+ N D+Y+AIKK D P+Q V AR + + + M+I
Sbjct: 542 LRVLQQKVTA-DTQIVVCLLSSNRKDKYDAIKKYLCTDCPTPSQCVVARTLGKQQTVMAI 600
Query: 362 ATKVAIQINCKLGGSPWTV 418
ATK+A+Q+NCK+GG W V
Sbjct: 601 ATKIALQMNCKMGGELWRV 619
>BC028581-1|AAH28581.1| 861|Homo sapiens piwi-like 1 (Drosophila)
protein.
Length = 861
Score = 82.6 bits (195), Expect = 5e-16
Identities = 42/139 (30%), Positives = 77/139 (55%), Gaps = 1/139 (0%)
Frame = +2
Query: 5 RSKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEY 184
R L+++ L++W++I R S I + K +G +M+ ++ + D Y
Sbjct: 483 RGAPLISVNPLDNWLLIYTRRNYEAANSLIQNLFKVTPAMGMQMKKAIMIEV-DDRTEAY 541
Query: 185 ANMCEEVIARKNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSK-SAMSI 361
+ ++ + + +++C+L+ N D+Y+AIKK D P+Q V AR + + + M+I
Sbjct: 542 LRVLQQKVTA-DTQIVVCLLSSNRKDKYDAIKKYPCTDCPTPSQCVVARTLGKQQTVMAI 600
Query: 362 ATKVAIQINCKLGGSPWTV 418
ATK+A+Q+NCK+GG W V
Sbjct: 601 ATKIALQMNCKMGGELWRV 619
>BC111751-1|AAI11752.1| 973|Homo sapiens piwi-like 2 (Drosophila)
protein.
Length = 973
Score = 80.6 bits (190), Expect = 2e-15
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Frame = +2
Query: 5 RSKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEY 184
R +L I ++ W + P+R ++++ K G +G RM P V ++ D Y
Sbjct: 594 RDPSILTIP-MHFWALFYPKRAMDQARELVNMLEKIAGPIGMRMSPPAWVELKDDRIETY 652
Query: 185 ANMCEEVIARKNPA-LILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAM-S 358
+ + + +++C++ D Y AIKK C V VP+QVV R + + + S
Sbjct: 653 VRTIQSTLGAEGKIQMVVCIIMGPRDDLYGAIKKLCCVQSPVPSQVVNVRTIGQPTRLRS 712
Query: 359 IATKVAIQINCKLGGSPWTV 418
+A K+ +QINCKLGG W V
Sbjct: 713 VAQKILLQINCKLGGELWGV 732
>BC025995-1|AAH25995.1| 973|Homo sapiens piwi-like 2 (Drosophila)
protein.
Length = 973
Score = 80.6 bits (190), Expect = 2e-15
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Frame = +2
Query: 5 RSKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEY 184
R +L I ++ W + P+R ++++ K G +G RM P V ++ D Y
Sbjct: 594 RDPSILTIP-MHFWALFYPKRAMDQARELVNMLEKIAGPIGMRMSPPAWVELKDDRIETY 652
Query: 185 ANMCEEVIARKNPA-LILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAM-S 358
+ + + +++C++ D Y AIKK C V VP+QVV R + + + S
Sbjct: 653 VRTIQSTLGAEGKIQMVVCIIMGPRDDLYGAIKKLCCVQSPVPSQVVNVRTIGQPTRLRS 712
Query: 359 IATKVAIQINCKLGGSPWTV 418
+A K+ +QINCKLGG W V
Sbjct: 713 VAQKILLQINCKLGGELWGV 732
>AK027497-1|BAB55155.1| 530|Homo sapiens protein ( Homo sapiens
cDNA FLJ14591 fis, clone NT2RM4002034, weakly similar to
Homo sapiens hiwi mRNA. ).
Length = 530
Score = 80.6 bits (190), Expect = 2e-15
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Frame = +2
Query: 5 RSKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEY 184
R +L I ++ W + P+R ++++ K G +G RM P V ++ D Y
Sbjct: 151 RDPSILTIP-MHFWALFYPKRAMDQARELVNMLEKIAGPIGMRMSPPAWVELKDDRIETY 209
Query: 185 ANMCEEVIARKNPA-LILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAM-S 358
+ + + +++C++ D Y AIKK C V VP+QVV R + + + S
Sbjct: 210 VRTIQSTLGAEGKIQMVVCIIMGPRDDLYGAIKKLCCVQSPVPSQVVNVRTIGQPTRLRS 269
Query: 359 IATKVAIQINCKLGGSPWTV 418
+A K+ +QINCKLGG W V
Sbjct: 270 VAQKILLQINCKLGGELWGV 289
>AB079367-1|BAC81342.1| 973|Homo sapiens PIWIL2 protein.
Length = 973
Score = 80.6 bits (190), Expect = 2e-15
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Frame = +2
Query: 5 RSKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEY 184
R +L I ++ W + P+R ++++ K G +G RM P V ++ D Y
Sbjct: 594 RDPSILTIP-MHFWALFYPKRAMDQARELVNMLEKIAGPIGMRMSPPAWVELKDDRIETY 652
Query: 185 ANMCEEVIARKNPA-LILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAM-S 358
+ + + +++C++ D Y AIKK C V VP+QVV R + + + S
Sbjct: 653 VRTIQSTLGAEGKIQMVVCIIMGPRDDLYGAIKKLCCVQSPVPSQVVNVRTIGQPTRLRS 712
Query: 359 IATKVAIQINCKLGGSPWTV 418
+A K+ +QINCKLGG W V
Sbjct: 713 VAQKILLQINCKLGGELWGV 732
>AK001213-1|BAA91558.1| 371|Homo sapiens protein ( Homo sapiens
cDNA FLJ10351 fis, clone NT2RM2001141. ).
Length = 371
Score = 78.2 bits (184), Expect = 1e-14
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Frame = +2
Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214
++ W + P+R ++++ K G +G RM P V ++ D Y + +
Sbjct: 1 MHFWALFYPKRAMDQARELVNMLEKIAGPIGMRMSPPAWVELKDDRIETYVRTIQSTLGA 60
Query: 215 KNPA-LILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAM-SIATKVAIQIN 388
+ +++C++ D Y AI K C V VP+QVV R + + + S+A K+ +QIN
Sbjct: 61 EGKIQMVVCIIMGPRDDLYGAINKLCCVQSPVPSQVVNVRTIGQPTRLRSVAQKILLQIN 120
Query: 389 CKLGGSPWTV 418
CKLGG W V
Sbjct: 121 CKLGGELWGV 130
>AB079368-1|BAC81343.1| 882|Homo sapiens PIWIL3 protein.
Length = 882
Score = 56.4 bits (130), Expect = 4e-08
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Frame = +2
Query: 2 MRSKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGP-- 175
+R LL L+SW+++ R+ S + +G M+ +++ + D
Sbjct: 496 IRELPLLNAMPLHSWLILYSRSSHREAMSLKGHLQSVTAPMGITMKPAEMIEVDGDANSY 555
Query: 176 IEYANMCEEVIARKNPALIL-----CVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMS 340
I+ + + +L C+L + RY++IK+ +P+Q V + +
Sbjct: 556 IDTLRKYTRPTLQMGMSCLLVFKVICILPNDDKRRYDSIKRYLCTKCPIPSQCVVKKTLE 615
Query: 341 SKSAMSIATKVAIQINCKLGGSPWTV 418
A +I TK+A Q+NCK+GG+ W V
Sbjct: 616 KVQARTIVTKIAQQMNCKMGGALWKV 641
>AF399636-1|AAK95121.1| 216|Homo sapiens olfactory receptor
protein.
Length = 216
Score = 36.7 bits (81), Expect = 0.031
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = -1
Query: 286 FLFYGFIPISIIPSQNAQ-YQGRIFPCNHFFTHISVFYRTVMTNHN*VRASHS-KTNTSA 113
F+ Y FI I+I+ +A+ +Q + C FT +SVFY TV+ + +SHS T+ A
Sbjct: 148 FISYLFIFITILKMHSAKGHQKALSTCASHFTAVSVFYGTVIFIYLQPSSSHSMDTDKMA 207
Query: 112 SFYY 101
S +Y
Sbjct: 208 SVFY 211
>AB065852-1|BAC06070.1| 309|Homo sapiens seven transmembrane helix
receptor protein.
Length = 309
Score = 36.7 bits (81), Expect = 0.031
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = -1
Query: 286 FLFYGFIPISIIPSQNAQ-YQGRIFPCNHFFTHISVFYRTVMTNHN*VRASHS-KTNTSA 113
F+ Y FI I+I+ +A+ +Q + C FT +SVFY TV+ + +SHS T+ A
Sbjct: 213 FISYLFIFITILKMHSAKGHQKALSTCASHFTAVSVFYGTVIFIYLQPSSSHSMDTDKMA 272
Query: 112 SFYY 101
S +Y
Sbjct: 273 SVFY 276
>AB065740-1|BAC05961.1| 310|Homo sapiens seven transmembrane helix
receptor protein.
Length = 310
Score = 31.5 bits (68), Expect = 1.2
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -1
Query: 286 FLFYGFIPISIIPSQNAQYQGRIFP-CNHFFTHISVFYRTVMTNHN*VRASHSKTNTS-A 113
F+ Y FI ++II ++A+ + + F C T I++FY TVM + +S+S A
Sbjct: 215 FISYTFILVAIIRMRSAEGRLKAFSTCGSHLTGITLFYGTVMFMYLRPTSSYSLDQDKWA 274
Query: 112 SFYYEI 95
S +Y +
Sbjct: 275 SVFYTV 280
>AB065541-1|BAC05786.1| 312|Homo sapiens seven transmembrane helix
receptor protein.
Length = 312
Score = 30.3 bits (65), Expect = 2.7
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -1
Query: 301 SVYSAFLFYGFIPISIIPSQNAQYQGRIFPCNHFFTHISVFYRTVMTNHN*VRASHS-KT 125
S+ L Y I ++I+ +A Q C T + VFY T++ + ++SHS T
Sbjct: 210 SLLIVLLSYLLILVAILRMNSAGRQKAFSTCGAHLTVVIVFYGTLLFMYVQPKSSHSFDT 269
Query: 124 NTSASFYYEI 95
+ AS +Y +
Sbjct: 270 DKVASIFYTL 279
>AB065545-1|BAC05790.1| 314|Homo sapiens seven transmembrane helix
receptor protein.
Length = 314
Score = 29.9 bits (64), Expect = 3.6
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -1
Query: 277 YGFIPISIIPSQNAQ-YQGRIFPCNHFFTHISVFYRTVMTNHN*VRASHS-KTNTSASFY 104
Y FI I+I+ +A YQ + C F + +FY T++ + +SHS T+ A +
Sbjct: 216 YTFIFITILKMHSASVYQKPLSTCASHFIAVGIFYGTIIFMYLQPSSSHSMDTDKMAPVF 275
Query: 103 Y 101
Y
Sbjct: 276 Y 276
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,754,571
Number of Sequences: 237096
Number of extensions: 1230696
Number of successful extensions: 2825
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2802
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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