BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0960 (418 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT011138-1|AAR82805.1| 857|Drosophila melanogaster GM05853p pro... 120 8e-28 BT011097-1|AAR82763.1| 871|Drosophila melanogaster RE21038p pro... 120 8e-28 AF104354-1|AAD08704.1| 843|Drosophila melanogaster PIWI protein. 120 8e-28 AE014134-2002|AAF53043.1| 843|Drosophila melanogaster CG6122-PA... 120 8e-28 AF104355-1|AAD08705.1| 844|Drosophila melanogaster PIWI protein. 114 5e-26 X94613-2|CAA64320.1| 866|Drosophila melanogaster AUBERGINE prot... 88 4e-18 AF145680-1|AAD38655.1| 866|Drosophila melanogaster sting protein. 88 4e-18 AE014134-2007|AAF53046.1| 866|Drosophila melanogaster CG6137-PA... 88 4e-18 EF434174-1|ABO26294.1| 866|Drosophila melanogaster AGO3 protein. 83 2e-16 EF211827-1|ABO27430.1| 867|Drosophila melanogaster Argonaute3 p... 83 2e-16 AF334412-1|AAK43544.1| 189|Drosophila melanogaster mutant Auber... 54 1e-07 AF334408-1|AAK43547.1| 54|Drosophila melanogaster truncated Au... 52 2e-07 AE014296-3774|ABI31274.1| 732|Drosophila melanogaster CG40300-P... 38 0.004 AE014296-3773|ABI31275.1| 732|Drosophila melanogaster CG40300-P... 38 0.004 AE014296-3772|EAA45981.2| 732|Drosophila melanogaster CG40300-P... 38 0.004 BT024257-1|ABC86319.1| 202|Drosophila melanogaster IP15837p pro... 29 1.9 AY071230-1|AAL48852.1| 123|Drosophila melanogaster RE26840p pro... 28 4.3 AE014297-3432|AAF56219.2| 267|Drosophila melanogaster CG33108-P... 28 4.3 BT025084-1|ABE73255.1| 910|Drosophila melanogaster IP14863p pro... 27 10.0 >BT011138-1|AAR82805.1| 857|Drosophila melanogaster GM05853p protein. Length = 857 Score = 120 bits (289), Expect = 8e-28 Identities = 55/128 (42%), Positives = 82/128 (64%) Frame = +2 Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214 L+ W VI P+R + + +D + + G+G R+RSP +I D Y ++ + R Sbjct: 489 LDRWAVIAPQRNSHELRTLLDSLYRAASGMGLRIRSPQEFIIYDDRTGTYVRAMDDCV-R 547 Query: 215 KNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAMSIATKVAIQINCK 394 +P LILC++ + A+RY +IKK+ VDRAVPTQVV + ++S MSIATK+AIQ+NCK Sbjct: 548 SDPKLILCLVPNDNAERYSSIKKRGYVDRAVPTQVVTLKTTKNRSLMSIATKIAIQLNCK 607 Query: 395 LGGSPWTV 418 LG +PW + Sbjct: 608 LGYTPWMI 615 >BT011097-1|AAR82763.1| 871|Drosophila melanogaster RE21038p protein. Length = 871 Score = 120 bits (289), Expect = 8e-28 Identities = 55/128 (42%), Positives = 82/128 (64%) Frame = +2 Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214 L+ W VI P+R + + +D + + G+G R+RSP +I D Y ++ + R Sbjct: 503 LDRWAVIAPQRNSHELRTLLDSLYRAASGMGLRIRSPQEFIIYDDRTGTYVRAMDDCV-R 561 Query: 215 KNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAMSIATKVAIQINCK 394 +P LILC++ + A+RY +IKK+ VDRAVPTQVV + ++S MSIATK+AIQ+NCK Sbjct: 562 SDPKLILCLVPNDNAERYSSIKKRGYVDRAVPTQVVTLKTTKNRSLMSIATKIAIQLNCK 621 Query: 395 LGGSPWTV 418 LG +PW + Sbjct: 622 LGYTPWMI 629 >AF104354-1|AAD08704.1| 843|Drosophila melanogaster PIWI protein. Length = 843 Score = 120 bits (289), Expect = 8e-28 Identities = 55/128 (42%), Positives = 82/128 (64%) Frame = +2 Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214 L+ W VI P+R + + +D + + G+G R+RSP +I D Y ++ + R Sbjct: 475 LDRWAVIAPQRNSHELRTLLDSLYRAASGMGLRIRSPQEFIIYDDRTGTYVRAMDDCV-R 533 Query: 215 KNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAMSIATKVAIQINCK 394 +P LILC++ + A+RY +IKK+ VDRAVPTQVV + ++S MSIATK+AIQ+NCK Sbjct: 534 SDPKLILCLVPNDNAERYSSIKKRGYVDRAVPTQVVTLKTTKNRSLMSIATKIAIQLNCK 593 Query: 395 LGGSPWTV 418 LG +PW + Sbjct: 594 LGYTPWMI 601 >AE014134-2002|AAF53043.1| 843|Drosophila melanogaster CG6122-PA protein. Length = 843 Score = 120 bits (289), Expect = 8e-28 Identities = 55/128 (42%), Positives = 82/128 (64%) Frame = +2 Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214 L+ W VI P+R + + +D + + G+G R+RSP +I D Y ++ + R Sbjct: 475 LDRWAVIAPQRNSHELRTLLDSLYRAASGMGLRIRSPQEFIIYDDRTGTYVRAMDDCV-R 533 Query: 215 KNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAMSIATKVAIQINCK 394 +P LILC++ + A+RY +IKK+ VDRAVPTQVV + ++S MSIATK+AIQ+NCK Sbjct: 534 SDPKLILCLVPNDNAERYSSIKKRGYVDRAVPTQVVTLKTTKNRSLMSIATKIAIQLNCK 593 Query: 395 LGGSPWTV 418 LG +PW + Sbjct: 594 LGYTPWMI 601 >AF104355-1|AAD08705.1| 844|Drosophila melanogaster PIWI protein. Length = 844 Score = 114 bits (274), Expect = 5e-26 Identities = 55/129 (42%), Positives = 80/129 (62%), Gaps = 1/129 (0%) Frame = +2 Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214 L+ W VI P+R + + +D + + G+G R+RSP +I D Y ++ + R Sbjct: 475 LDRWAVIAPQRNSHELRTLLDSLYRAASGMGLRIRSPQEFIIYDDRTGTYVRAMDDCV-R 533 Query: 215 KNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSK-SAMSIATKVAIQINC 391 +P LILC++ + A+RY +IKK+ VDRAVPTQVV + S MSIATK+AIQ+NC Sbjct: 534 SDPKLILCLVPNDNAERYSSIKKRGYVDRAVPTQVVTLKTTKKPYSLMSIATKIAIQLNC 593 Query: 392 KLGGSPWTV 418 KLG +PW + Sbjct: 594 KLGYTPWMI 602 >X94613-2|CAA64320.1| 866|Drosophila melanogaster AUBERGINE protein. Length = 866 Score = 88.2 bits (209), Expect = 4e-18 Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 5/133 (3%) Frame = +2 Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214 +N W VITP R R+T+ F+ + I+T + + +P I D Y+ + A Sbjct: 492 INRWYVITPSRNLRETQEFVQMCIRTASSMKMNICNPIYEEIPDDRNGTYSQAIDNAAAN 551 Query: 215 KNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVV-----CARNMSSKSAMSIATKVAI 379 +P +++ V+ ++Y IKK+ VDR VP+QVV R MSIATKV I Sbjct: 552 -DPQIVMVVMRSPNEEKYSCIKKRTCVDRPVPSQVVTLKVIAPRQQKPTGLMSIATKVVI 610 Query: 380 QINCKLGGSPWTV 418 Q+N KL G+PW V Sbjct: 611 QMNAKLMGAPWQV 623 >AF145680-1|AAD38655.1| 866|Drosophila melanogaster sting protein. Length = 866 Score = 88.2 bits (209), Expect = 4e-18 Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 5/133 (3%) Frame = +2 Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214 +N W VITP R R+T+ F+ + I+T + + +P I D Y+ + A Sbjct: 492 INRWYVITPSRNLRETQEFVQMCIRTASSMKMNICNPIYEEIPDDRNGTYSQAIDNAAAN 551 Query: 215 KNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVV-----CARNMSSKSAMSIATKVAI 379 +P +++ V+ ++Y IKK+ VDR VP+QVV R MSIATKV I Sbjct: 552 -DPQIVMVVMRSPNEEKYSCIKKRTCVDRPVPSQVVTLKVIAPRQQKPTGLMSIATKVVI 610 Query: 380 QINCKLGGSPWTV 418 Q+N KL G+PW V Sbjct: 611 QMNAKLMGAPWQV 623 >AE014134-2007|AAF53046.1| 866|Drosophila melanogaster CG6137-PA protein. Length = 866 Score = 88.2 bits (209), Expect = 4e-18 Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 5/133 (3%) Frame = +2 Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214 +N W VITP R R+T+ F+ + I+T + + +P I D Y+ + A Sbjct: 492 INRWYVITPSRNLRETQEFVQMCIRTASSMKMNICNPIYEEIPDDRNGTYSQAIDNAAAN 551 Query: 215 KNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVV-----CARNMSSKSAMSIATKVAI 379 +P +++ V+ ++Y IKK+ VDR VP+QVV R MSIATKV I Sbjct: 552 -DPQIVMVVMRSPNEEKYSCIKKRTCVDRPVPSQVVTLKVIAPRQQKPTGLMSIATKVVI 610 Query: 380 QINCKLGGSPWTV 418 Q+N KL G+PW V Sbjct: 611 QMNAKLMGAPWQV 623 >EF434174-1|ABO26294.1| 866|Drosophila melanogaster AGO3 protein. Length = 866 Score = 82.6 bits (195), Expect = 2e-16 Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 1/138 (0%) Frame = +2 Query: 8 SKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYA 187 + +L + L+ W++I R+ S +D + + +G + +P ++ + HD Y Sbjct: 494 TNEMLKVVHLSKWIIIHLRNYRQAATSLLDNMKQACESLGMNISNPTMISLDHDRIDAYI 553 Query: 188 NMCEEVIARKNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSK-SAMSIA 364 I N +++C+ DRY AIKK C + +P+QV+ A+ + + S+ Sbjct: 554 QALRRNITM-NTQMVVCICHNRRDDRYAAIKKICCSEIPIPSQVINAKTLQNDLKIRSVV 612 Query: 365 TKVAIQINCKLGGSPWTV 418 K+ +Q+NCKLGGS WTV Sbjct: 613 QKIVLQMNCKLGGSLWTV 630 >EF211827-1|ABO27430.1| 867|Drosophila melanogaster Argonaute3 protein. Length = 867 Score = 82.6 bits (195), Expect = 2e-16 Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 1/138 (0%) Frame = +2 Query: 8 SKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYA 187 + +L + L+ W++I R+ S +D + + +G + +P ++ + HD Y Sbjct: 494 TNEMLKVVHLSKWIIIHLRNYRQAATSLLDNMKQACESLGMNISNPTMISLDHDRIDAYI 553 Query: 188 NMCEEVIARKNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSK-SAMSIA 364 I N +++C+ DRY AIKK C + +P+QV+ A+ + + S+ Sbjct: 554 QALRRNITM-NTQMVVCICHNRRDDRYAAIKKICCSEIPIPSQVINAKTLQNDLKIRSVV 612 Query: 365 TKVAIQINCKLGGSPWTV 418 K+ +Q+NCKLGGS WTV Sbjct: 613 QKIVLQMNCKLGGSLWTV 630 >AF334412-1|AAK43544.1| 189|Drosophila melanogaster mutant Aubergine protein. Length = 189 Score = 53.6 bits (123), Expect = 1e-07 Identities = 29/56 (51%), Positives = 33/56 (58%), Gaps = 5/56 (8%) Frame = +2 Query: 266 YEAIKKKCTVDRAVPTQVV-----CARNMSSKSAMSIATKVAIQINCKLGGSPWTV 418 Y IKK+ VDR VP+QVV R MSIATKV IQ+N KL G+PW V Sbjct: 1 YSCIKKRTCVDRPVPSQVVTLKVIAPRQQKPTGLMSIATKVVIQMNAKLMGAPWQV 56 >AF334408-1|AAK43547.1| 54|Drosophila melanogaster truncated Aubergine protein. Length = 54 Score = 52.4 bits (120), Expect = 2e-07 Identities = 28/54 (51%), Positives = 32/54 (59%), Gaps = 5/54 (9%) Frame = +2 Query: 266 YEAIKKKCTVDRAVPTQVV-----CARNMSSKSAMSIATKVAIQINCKLGGSPW 412 Y IKK+ VDR VP+QVV R MSIATKV IQ+N KL G+PW Sbjct: 1 YSCIKKRTCVDRPVPSQVVTLKVIAPRQQKPTGLMSIATKVVIQMNAKLMGAPW 54 >AE014296-3774|ABI31274.1| 732|Drosophila melanogaster CG40300-PC, isoform C protein. Length = 732 Score = 38.3 bits (85), Expect = 0.004 Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%) Frame = +2 Query: 218 NPALILCVLARNYADRY-EAIKKKCTVDRAVPTQVVCARNMSSKSAM-SIATKVAIQINC 391 NP +I L + D Y +A+++ T++ + V+ A+ + + + S+ K+ +Q+NC Sbjct: 538 NPTMIS--LDHDRIDAYIQALRRNITMNTQMV--VINAKTLQNDLKIRSVVQKIVLQMNC 593 Query: 392 KLGGSPWTV 418 KLGGS WTV Sbjct: 594 KLGGSLWTV 602 >AE014296-3773|ABI31275.1| 732|Drosophila melanogaster CG40300-PB, isoform B protein. Length = 732 Score = 38.3 bits (85), Expect = 0.004 Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%) Frame = +2 Query: 218 NPALILCVLARNYADRY-EAIKKKCTVDRAVPTQVVCARNMSSKSAM-SIATKVAIQINC 391 NP +I L + D Y +A+++ T++ + V+ A+ + + + S+ K+ +Q+NC Sbjct: 538 NPTMIS--LDHDRIDAYIQALRRNITMNTQMV--VINAKTLQNDLKIRSVVQKIVLQMNC 593 Query: 392 KLGGSPWTV 418 KLGGS WTV Sbjct: 594 KLGGSLWTV 602 >AE014296-3772|EAA45981.2| 732|Drosophila melanogaster CG40300-PA, isoform A protein. Length = 732 Score = 38.3 bits (85), Expect = 0.004 Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%) Frame = +2 Query: 218 NPALILCVLARNYADRY-EAIKKKCTVDRAVPTQVVCARNMSSKSAM-SIATKVAIQINC 391 NP +I L + D Y +A+++ T++ + V+ A+ + + + S+ K+ +Q+NC Sbjct: 538 NPTMIS--LDHDRIDAYIQALRRNITMNTQMV--VINAKTLQNDLKIRSVVQKIVLQMNC 593 Query: 392 KLGGSPWTV 418 KLGGS WTV Sbjct: 594 KLGGSLWTV 602 >BT024257-1|ABC86319.1| 202|Drosophila melanogaster IP15837p protein. Length = 202 Score = 29.5 bits (63), Expect = 1.9 Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%) Frame = -3 Query: 320 LPASARLGLQCISFLWLHTYQHNS*PERTVSGQDFSLQSL-LHTY*RILSD 171 +P ++ L C++FLW+ PE TV ++++Q+L LHTY R+ +D Sbjct: 134 IPKKNQVMLACLAFLWVMFV-----PESTV--LEYAIQALALHTYFRVKTD 177 >AY071230-1|AAL48852.1| 123|Drosophila melanogaster RE26840p protein. Length = 123 Score = 28.3 bits (60), Expect = 4.3 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = -2 Query: 126 PTPPPVFIMRSMNDSVSRRCLSGVITTQEFSWA 28 P PPP+ + S + R + ITT E +WA Sbjct: 11 PPPPPMIVTPSTPATTKERPVGDNITTDECTWA 43 >AE014297-3432|AAF56219.2| 267|Drosophila melanogaster CG33108-PA protein. Length = 267 Score = 28.3 bits (60), Expect = 4.3 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = -2 Query: 126 PTPPPVFIMRSMNDSVSRRCLSGVITTQEFSWA 28 P PPP+ + S + R + ITT E +WA Sbjct: 11 PPPPPMIVTPSTPATTKERPVGDNITTDECTWA 43 >BT025084-1|ABE73255.1| 910|Drosophila melanogaster IP14863p protein. Length = 910 Score = 27.1 bits (57), Expect = 10.0 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +2 Query: 119 GVGFRMRSPDLVVIRHDGPIEYANMCEEVIARKNPALILCVLARNYADRYEAIK-KKCTV 295 G+ FR DLV +HDG + Y +V+ R + L ++ R + + C Sbjct: 301 GICFRATG-DLVTRQHDGTLFYNERSNDVVKRAGNRISLGLITRKIQKCLPSSELTTCLW 359 Query: 296 DRAVPTQVVCARNMSSKS 349 + + C R + SK+ Sbjct: 360 LEDLQKLICCIRTLESKT 377 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,245,367 Number of Sequences: 53049 Number of extensions: 381575 Number of successful extensions: 983 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 946 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 967 length of database: 24,988,368 effective HSP length: 78 effective length of database: 20,850,546 effective search space used: 1251032760 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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