Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0960
(418 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011138-1|AAR82805.1| 857|Drosophila melanogaster GM05853p pro... 120 8e-28
BT011097-1|AAR82763.1| 871|Drosophila melanogaster RE21038p pro... 120 8e-28
AF104354-1|AAD08704.1| 843|Drosophila melanogaster PIWI protein. 120 8e-28
AE014134-2002|AAF53043.1| 843|Drosophila melanogaster CG6122-PA... 120 8e-28
AF104355-1|AAD08705.1| 844|Drosophila melanogaster PIWI protein. 114 5e-26
X94613-2|CAA64320.1| 866|Drosophila melanogaster AUBERGINE prot... 88 4e-18
AF145680-1|AAD38655.1| 866|Drosophila melanogaster sting protein. 88 4e-18
AE014134-2007|AAF53046.1| 866|Drosophila melanogaster CG6137-PA... 88 4e-18
EF434174-1|ABO26294.1| 866|Drosophila melanogaster AGO3 protein. 83 2e-16
EF211827-1|ABO27430.1| 867|Drosophila melanogaster Argonaute3 p... 83 2e-16
AF334412-1|AAK43544.1| 189|Drosophila melanogaster mutant Auber... 54 1e-07
AF334408-1|AAK43547.1| 54|Drosophila melanogaster truncated Au... 52 2e-07
AE014296-3774|ABI31274.1| 732|Drosophila melanogaster CG40300-P... 38 0.004
AE014296-3773|ABI31275.1| 732|Drosophila melanogaster CG40300-P... 38 0.004
AE014296-3772|EAA45981.2| 732|Drosophila melanogaster CG40300-P... 38 0.004
BT024257-1|ABC86319.1| 202|Drosophila melanogaster IP15837p pro... 29 1.9
AY071230-1|AAL48852.1| 123|Drosophila melanogaster RE26840p pro... 28 4.3
AE014297-3432|AAF56219.2| 267|Drosophila melanogaster CG33108-P... 28 4.3
BT025084-1|ABE73255.1| 910|Drosophila melanogaster IP14863p pro... 27 10.0
>BT011138-1|AAR82805.1| 857|Drosophila melanogaster GM05853p
protein.
Length = 857
Score = 120 bits (289), Expect = 8e-28
Identities = 55/128 (42%), Positives = 82/128 (64%)
Frame = +2
Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214
L+ W VI P+R + + +D + + G+G R+RSP +I D Y ++ + R
Sbjct: 489 LDRWAVIAPQRNSHELRTLLDSLYRAASGMGLRIRSPQEFIIYDDRTGTYVRAMDDCV-R 547
Query: 215 KNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAMSIATKVAIQINCK 394
+P LILC++ + A+RY +IKK+ VDRAVPTQVV + ++S MSIATK+AIQ+NCK
Sbjct: 548 SDPKLILCLVPNDNAERYSSIKKRGYVDRAVPTQVVTLKTTKNRSLMSIATKIAIQLNCK 607
Query: 395 LGGSPWTV 418
LG +PW +
Sbjct: 608 LGYTPWMI 615
>BT011097-1|AAR82763.1| 871|Drosophila melanogaster RE21038p
protein.
Length = 871
Score = 120 bits (289), Expect = 8e-28
Identities = 55/128 (42%), Positives = 82/128 (64%)
Frame = +2
Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214
L+ W VI P+R + + +D + + G+G R+RSP +I D Y ++ + R
Sbjct: 503 LDRWAVIAPQRNSHELRTLLDSLYRAASGMGLRIRSPQEFIIYDDRTGTYVRAMDDCV-R 561
Query: 215 KNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAMSIATKVAIQINCK 394
+P LILC++ + A+RY +IKK+ VDRAVPTQVV + ++S MSIATK+AIQ+NCK
Sbjct: 562 SDPKLILCLVPNDNAERYSSIKKRGYVDRAVPTQVVTLKTTKNRSLMSIATKIAIQLNCK 621
Query: 395 LGGSPWTV 418
LG +PW +
Sbjct: 622 LGYTPWMI 629
>AF104354-1|AAD08704.1| 843|Drosophila melanogaster PIWI protein.
Length = 843
Score = 120 bits (289), Expect = 8e-28
Identities = 55/128 (42%), Positives = 82/128 (64%)
Frame = +2
Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214
L+ W VI P+R + + +D + + G+G R+RSP +I D Y ++ + R
Sbjct: 475 LDRWAVIAPQRNSHELRTLLDSLYRAASGMGLRIRSPQEFIIYDDRTGTYVRAMDDCV-R 533
Query: 215 KNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAMSIATKVAIQINCK 394
+P LILC++ + A+RY +IKK+ VDRAVPTQVV + ++S MSIATK+AIQ+NCK
Sbjct: 534 SDPKLILCLVPNDNAERYSSIKKRGYVDRAVPTQVVTLKTTKNRSLMSIATKIAIQLNCK 593
Query: 395 LGGSPWTV 418
LG +PW +
Sbjct: 594 LGYTPWMI 601
>AE014134-2002|AAF53043.1| 843|Drosophila melanogaster CG6122-PA
protein.
Length = 843
Score = 120 bits (289), Expect = 8e-28
Identities = 55/128 (42%), Positives = 82/128 (64%)
Frame = +2
Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214
L+ W VI P+R + + +D + + G+G R+RSP +I D Y ++ + R
Sbjct: 475 LDRWAVIAPQRNSHELRTLLDSLYRAASGMGLRIRSPQEFIIYDDRTGTYVRAMDDCV-R 533
Query: 215 KNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSKSAMSIATKVAIQINCK 394
+P LILC++ + A+RY +IKK+ VDRAVPTQVV + ++S MSIATK+AIQ+NCK
Sbjct: 534 SDPKLILCLVPNDNAERYSSIKKRGYVDRAVPTQVVTLKTTKNRSLMSIATKIAIQLNCK 593
Query: 395 LGGSPWTV 418
LG +PW +
Sbjct: 594 LGYTPWMI 601
>AF104355-1|AAD08705.1| 844|Drosophila melanogaster PIWI protein.
Length = 844
Score = 114 bits (274), Expect = 5e-26
Identities = 55/129 (42%), Positives = 80/129 (62%), Gaps = 1/129 (0%)
Frame = +2
Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214
L+ W VI P+R + + +D + + G+G R+RSP +I D Y ++ + R
Sbjct: 475 LDRWAVIAPQRNSHELRTLLDSLYRAASGMGLRIRSPQEFIIYDDRTGTYVRAMDDCV-R 533
Query: 215 KNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSK-SAMSIATKVAIQINC 391
+P LILC++ + A+RY +IKK+ VDRAVPTQVV + S MSIATK+AIQ+NC
Sbjct: 534 SDPKLILCLVPNDNAERYSSIKKRGYVDRAVPTQVVTLKTTKKPYSLMSIATKIAIQLNC 593
Query: 392 KLGGSPWTV 418
KLG +PW +
Sbjct: 594 KLGYTPWMI 602
>X94613-2|CAA64320.1| 866|Drosophila melanogaster AUBERGINE
protein.
Length = 866
Score = 88.2 bits (209), Expect = 4e-18
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Frame = +2
Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214
+N W VITP R R+T+ F+ + I+T + + +P I D Y+ + A
Sbjct: 492 INRWYVITPSRNLRETQEFVQMCIRTASSMKMNICNPIYEEIPDDRNGTYSQAIDNAAAN 551
Query: 215 KNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVV-----CARNMSSKSAMSIATKVAI 379
+P +++ V+ ++Y IKK+ VDR VP+QVV R MSIATKV I
Sbjct: 552 -DPQIVMVVMRSPNEEKYSCIKKRTCVDRPVPSQVVTLKVIAPRQQKPTGLMSIATKVVI 610
Query: 380 QINCKLGGSPWTV 418
Q+N KL G+PW V
Sbjct: 611 QMNAKLMGAPWQV 623
>AF145680-1|AAD38655.1| 866|Drosophila melanogaster sting protein.
Length = 866
Score = 88.2 bits (209), Expect = 4e-18
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Frame = +2
Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214
+N W VITP R R+T+ F+ + I+T + + +P I D Y+ + A
Sbjct: 492 INRWYVITPSRNLRETQEFVQMCIRTASSMKMNICNPIYEEIPDDRNGTYSQAIDNAAAN 551
Query: 215 KNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVV-----CARNMSSKSAMSIATKVAI 379
+P +++ V+ ++Y IKK+ VDR VP+QVV R MSIATKV I
Sbjct: 552 -DPQIVMVVMRSPNEEKYSCIKKRTCVDRPVPSQVVTLKVIAPRQQKPTGLMSIATKVVI 610
Query: 380 QINCKLGGSPWTV 418
Q+N KL G+PW V
Sbjct: 611 QMNAKLMGAPWQV 623
>AE014134-2007|AAF53046.1| 866|Drosophila melanogaster CG6137-PA
protein.
Length = 866
Score = 88.2 bits (209), Expect = 4e-18
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Frame = +2
Query: 35 LNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYANMCEEVIAR 214
+N W VITP R R+T+ F+ + I+T + + +P I D Y+ + A
Sbjct: 492 INRWYVITPSRNLRETQEFVQMCIRTASSMKMNICNPIYEEIPDDRNGTYSQAIDNAAAN 551
Query: 215 KNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVV-----CARNMSSKSAMSIATKVAI 379
+P +++ V+ ++Y IKK+ VDR VP+QVV R MSIATKV I
Sbjct: 552 -DPQIVMVVMRSPNEEKYSCIKKRTCVDRPVPSQVVTLKVIAPRQQKPTGLMSIATKVVI 610
Query: 380 QINCKLGGSPWTV 418
Q+N KL G+PW V
Sbjct: 611 QMNAKLMGAPWQV 623
>EF434174-1|ABO26294.1| 866|Drosophila melanogaster AGO3 protein.
Length = 866
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Frame = +2
Query: 8 SKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYA 187
+ +L + L+ W++I R+ S +D + + +G + +P ++ + HD Y
Sbjct: 494 TNEMLKVVHLSKWIIIHLRNYRQAATSLLDNMKQACESLGMNISNPTMISLDHDRIDAYI 553
Query: 188 NMCEEVIARKNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSK-SAMSIA 364
I N +++C+ DRY AIKK C + +P+QV+ A+ + + S+
Sbjct: 554 QALRRNITM-NTQMVVCICHNRRDDRYAAIKKICCSEIPIPSQVINAKTLQNDLKIRSVV 612
Query: 365 TKVAIQINCKLGGSPWTV 418
K+ +Q+NCKLGGS WTV
Sbjct: 613 QKIVLQMNCKLGGSLWTV 630
>EF211827-1|ABO27430.1| 867|Drosophila melanogaster Argonaute3
protein.
Length = 867
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Frame = +2
Query: 8 SKHLLAIAQLNSWVVITPERQRRDTESFIDLIIKTGGGVGFRMRSPDLVVIRHDGPIEYA 187
+ +L + L+ W++I R+ S +D + + +G + +P ++ + HD Y
Sbjct: 494 TNEMLKVVHLSKWIIIHLRNYRQAATSLLDNMKQACESLGMNISNPTMISLDHDRIDAYI 553
Query: 188 NMCEEVIARKNPALILCVLARNYADRYEAIKKKCTVDRAVPTQVVCARNMSSK-SAMSIA 364
I N +++C+ DRY AIKK C + +P+QV+ A+ + + S+
Sbjct: 554 QALRRNITM-NTQMVVCICHNRRDDRYAAIKKICCSEIPIPSQVINAKTLQNDLKIRSVV 612
Query: 365 TKVAIQINCKLGGSPWTV 418
K+ +Q+NCKLGGS WTV
Sbjct: 613 QKIVLQMNCKLGGSLWTV 630
>AF334412-1|AAK43544.1| 189|Drosophila melanogaster mutant
Aubergine protein.
Length = 189
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/56 (51%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Frame = +2
Query: 266 YEAIKKKCTVDRAVPTQVV-----CARNMSSKSAMSIATKVAIQINCKLGGSPWTV 418
Y IKK+ VDR VP+QVV R MSIATKV IQ+N KL G+PW V
Sbjct: 1 YSCIKKRTCVDRPVPSQVVTLKVIAPRQQKPTGLMSIATKVVIQMNAKLMGAPWQV 56
>AF334408-1|AAK43547.1| 54|Drosophila melanogaster truncated
Aubergine protein.
Length = 54
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/54 (51%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Frame = +2
Query: 266 YEAIKKKCTVDRAVPTQVV-----CARNMSSKSAMSIATKVAIQINCKLGGSPW 412
Y IKK+ VDR VP+QVV R MSIATKV IQ+N KL G+PW
Sbjct: 1 YSCIKKRTCVDRPVPSQVVTLKVIAPRQQKPTGLMSIATKVVIQMNAKLMGAPW 54
>AE014296-3774|ABI31274.1| 732|Drosophila melanogaster CG40300-PC,
isoform C protein.
Length = 732
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +2
Query: 218 NPALILCVLARNYADRY-EAIKKKCTVDRAVPTQVVCARNMSSKSAM-SIATKVAIQINC 391
NP +I L + D Y +A+++ T++ + V+ A+ + + + S+ K+ +Q+NC
Sbjct: 538 NPTMIS--LDHDRIDAYIQALRRNITMNTQMV--VINAKTLQNDLKIRSVVQKIVLQMNC 593
Query: 392 KLGGSPWTV 418
KLGGS WTV
Sbjct: 594 KLGGSLWTV 602
>AE014296-3773|ABI31275.1| 732|Drosophila melanogaster CG40300-PB,
isoform B protein.
Length = 732
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +2
Query: 218 NPALILCVLARNYADRY-EAIKKKCTVDRAVPTQVVCARNMSSKSAM-SIATKVAIQINC 391
NP +I L + D Y +A+++ T++ + V+ A+ + + + S+ K+ +Q+NC
Sbjct: 538 NPTMIS--LDHDRIDAYIQALRRNITMNTQMV--VINAKTLQNDLKIRSVVQKIVLQMNC 593
Query: 392 KLGGSPWTV 418
KLGGS WTV
Sbjct: 594 KLGGSLWTV 602
>AE014296-3772|EAA45981.2| 732|Drosophila melanogaster CG40300-PA,
isoform A protein.
Length = 732
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +2
Query: 218 NPALILCVLARNYADRY-EAIKKKCTVDRAVPTQVVCARNMSSKSAM-SIATKVAIQINC 391
NP +I L + D Y +A+++ T++ + V+ A+ + + + S+ K+ +Q+NC
Sbjct: 538 NPTMIS--LDHDRIDAYIQALRRNITMNTQMV--VINAKTLQNDLKIRSVVQKIVLQMNC 593
Query: 392 KLGGSPWTV 418
KLGGS WTV
Sbjct: 594 KLGGSLWTV 602
>BT024257-1|ABC86319.1| 202|Drosophila melanogaster IP15837p
protein.
Length = 202
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -3
Query: 320 LPASARLGLQCISFLWLHTYQHNS*PERTVSGQDFSLQSL-LHTY*RILSD 171
+P ++ L C++FLW+ PE TV ++++Q+L LHTY R+ +D
Sbjct: 134 IPKKNQVMLACLAFLWVMFV-----PESTV--LEYAIQALALHTYFRVKTD 177
>AY071230-1|AAL48852.1| 123|Drosophila melanogaster RE26840p
protein.
Length = 123
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 126 PTPPPVFIMRSMNDSVSRRCLSGVITTQEFSWA 28
P PPP+ + S + R + ITT E +WA
Sbjct: 11 PPPPPMIVTPSTPATTKERPVGDNITTDECTWA 43
>AE014297-3432|AAF56219.2| 267|Drosophila melanogaster CG33108-PA
protein.
Length = 267
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 126 PTPPPVFIMRSMNDSVSRRCLSGVITTQEFSWA 28
P PPP+ + S + R + ITT E +WA
Sbjct: 11 PPPPPMIVTPSTPATTKERPVGDNITTDECTWA 43
>BT025084-1|ABE73255.1| 910|Drosophila melanogaster IP14863p
protein.
Length = 910
Score = 27.1 bits (57), Expect = 10.0
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +2
Query: 119 GVGFRMRSPDLVVIRHDGPIEYANMCEEVIARKNPALILCVLARNYADRYEAIK-KKCTV 295
G+ FR DLV +HDG + Y +V+ R + L ++ R + + C
Sbjct: 301 GICFRATG-DLVTRQHDGTLFYNERSNDVVKRAGNRISLGLITRKIQKCLPSSELTTCLW 359
Query: 296 DRAVPTQVVCARNMSSKS 349
+ + C R + SK+
Sbjct: 360 LEDLQKLICCIRTLESKT 377
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,245,367
Number of Sequences: 53049
Number of extensions: 381575
Number of successful extensions: 983
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -