BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0958 (593 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 27 0.35 AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 25 1.4 AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 24 3.2 >AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein protein. Length = 400 Score = 27.5 bits (58), Expect = 0.35 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%) Frame = +2 Query: 362 GSWKTPSKQKKNFNLPQP------KMANTDLTRILK 451 G K P K+KK +LP+P K N DL ++LK Sbjct: 153 GQSKQPKKKKKKRSLPKPEAVVIEKCENIDLAKVLK 188 >AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule binding protein protein. Length = 838 Score = 25.4 bits (53), Expect = 1.4 Identities = 11/25 (44%), Positives = 12/25 (48%) Frame = -3 Query: 363 PNKGSSLPNAD*VQMTKRPRWPPGA 289 P G P V M RP+ PPGA Sbjct: 212 PRPGGMYPQPPGVPMPMRPQMPPGA 236 >AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase protein. Length = 1173 Score = 24.2 bits (50), Expect = 3.2 Identities = 16/64 (25%), Positives = 25/64 (39%) Frame = +2 Query: 290 APGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIRE 469 A G +V W RL P G+W++ + NF+L Q + + L + Sbjct: 901 AAGHQASGYVRWAH----RLIPDIGAWQSRKHGEVNFHLSQIISGHGFFRKYLADMKFTS 956 Query: 470 GPPC 481 P C Sbjct: 957 SPDC 960 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 618,104 Number of Sequences: 2352 Number of extensions: 12769 Number of successful extensions: 44 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 44 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 57188952 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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