Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0958
(593 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 211 2e-54
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 211 2e-54
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 211 2e-54
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 211 2e-54
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 211 2e-54
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 211 2e-54
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 211 2e-54
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 211 2e-54
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 211 2e-54
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 211 2e-54
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 211 2e-54
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 211 2e-54
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 207 3e-53
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 203 3e-52
X16666-1|CAA34656.1| 301|Homo sapiens protein ( Human HOX2I mRN... 33 0.58
AF287350-1|AAG31762.1| 108|Homo sapiens homeobox B1 protein. 33 0.58
AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast can... 33 0.76
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 211 bits (515), Expect = 2e-54
Identities = 95/155 (61%), Positives = 120/155 (77%)
Frame = +2
Query: 2 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 181
E++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR
Sbjct: 145 EEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQR 204
Query: 182 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 361
+GP II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 362 GSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIR 466
G+W+ + K N+NLP KM NTDL+RILKS EI+
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 468 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTIL 341
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 211 bits (515), Expect = 2e-54
Identities = 95/155 (61%), Positives = 120/155 (77%)
Frame = +2
Query: 2 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 181
E++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR
Sbjct: 145 EEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQR 204
Query: 182 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 361
+GP II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 362 GSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIR 466
G+W+ + K N+NLP KM NTDL+RILKS EI+
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 468 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTIL 341
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 211 bits (515), Expect = 2e-54
Identities = 95/155 (61%), Positives = 120/155 (77%)
Frame = +2
Query: 2 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 181
E++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR
Sbjct: 145 EEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQR 204
Query: 182 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 361
+GP II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 362 GSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIR 466
G+W+ + K N+NLP KM NTDL+RILKS EI+
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 468 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTIL 341
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 211 bits (515), Expect = 2e-54
Identities = 95/155 (61%), Positives = 120/155 (77%)
Frame = +2
Query: 2 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 181
E++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR
Sbjct: 145 EEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQR 204
Query: 182 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 361
+GP II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 362 GSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIR 466
G+W+ + K N+NLP KM NTDL+RILKS EI+
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 468 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTIL 341
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 211 bits (515), Expect = 2e-54
Identities = 95/155 (61%), Positives = 120/155 (77%)
Frame = +2
Query: 2 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 181
E++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR
Sbjct: 145 EEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQR 204
Query: 182 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 361
+GP II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 362 GSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIR 466
G+W+ + K N+NLP KM NTDL+RILKS EI+
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 468 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTIL 341
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 211 bits (515), Expect = 2e-54
Identities = 95/155 (61%), Positives = 120/155 (77%)
Frame = +2
Query: 2 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 181
E++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR
Sbjct: 145 EEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQR 204
Query: 182 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 361
+GP II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 362 GSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIR 466
G+W+ + K N+NLP KM NTDL+RILKS EI+
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 468 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTIL 341
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 211 bits (515), Expect = 2e-54
Identities = 95/155 (61%), Positives = 120/155 (77%)
Frame = +2
Query: 2 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 181
E++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR
Sbjct: 145 EEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQR 204
Query: 182 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 361
+GP II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 362 GSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIR 466
G+W+ + K N+NLP KM NTDL+RILKS EI+
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 468 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTIL 341
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 211 bits (515), Expect = 2e-54
Identities = 95/155 (61%), Positives = 120/155 (77%)
Frame = +2
Query: 2 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 181
E++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR
Sbjct: 145 EEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQR 204
Query: 182 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 361
+GP II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 362 GSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIR 466
G+W+ + K N+NLP KM NTDL+RILKS EI+
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 468 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTIL 341
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 211 bits (515), Expect = 2e-54
Identities = 95/155 (61%), Positives = 120/155 (77%)
Frame = +2
Query: 2 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 181
E++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR
Sbjct: 145 EEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQR 204
Query: 182 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 361
+GP II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 362 GSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIR 466
G+W+ + K N+NLP KM NTDL+RILKS EI+
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 468 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTIL 341
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 211 bits (515), Expect = 2e-54
Identities = 95/155 (61%), Positives = 120/155 (77%)
Frame = +2
Query: 2 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 181
E++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR
Sbjct: 145 EEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQR 204
Query: 182 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 361
+GP II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 362 GSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIR 466
G+W+ + K N+NLP KM NTDL+RILKS EI+
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 468 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTIL 341
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 211 bits (515), Expect = 2e-54
Identities = 95/155 (61%), Positives = 120/155 (77%)
Frame = +2
Query: 2 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 181
E++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR
Sbjct: 159 EEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQR 218
Query: 182 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 361
+GP II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+
Sbjct: 219 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 278
Query: 362 GSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIR 466
G+W+ + K N+NLP KM NTDL+RILKS EI+
Sbjct: 279 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 313
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 468 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 314 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTIL 355
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 211 bits (515), Expect = 2e-54
Identities = 95/155 (61%), Positives = 120/155 (77%)
Frame = +2
Query: 2 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 181
E++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR
Sbjct: 145 EEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQR 204
Query: 182 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 361
+GP II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 264
Query: 362 GSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIR 466
G+W+ + K N+NLP KM NTDL+RILKS EI+
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 468 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTIL 341
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 207 bits (505), Expect = 3e-53
Identities = 93/155 (60%), Positives = 119/155 (76%)
Frame = +2
Query: 2 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 181
E++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR
Sbjct: 145 EEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQR 204
Query: 182 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 361
+GP II+N+D G+ +AFRNIPG+ APGGH+GRF IW +SAF +LD L+
Sbjct: 205 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWIESAFRKLDELY 264
Query: 362 GSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIR 466
G+W+ + K N+NLP +M NTDL+RILKS EI+
Sbjct: 265 GTWRKAASLKSNYNLPMHEMINTDLSRILKSPEIQ 299
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 468 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTIL 341
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 203 bits (496), Expect = 3e-52
Identities = 94/155 (60%), Positives = 118/155 (76%)
Frame = +2
Query: 2 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 181
E+ PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRR IQR
Sbjct: 145 EEFPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRR-IQR 203
Query: 182 KGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 361
+GP II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+SAF +LD L+
Sbjct: 204 RGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELY 263
Query: 362 GSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIR 466
G+W+ + K N+NLP KM NTDL+RILKS EI+
Sbjct: 264 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 298
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 468 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 299 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTIL 340
>X16666-1|CAA34656.1| 301|Homo sapiens protein ( Human HOX2I mRNA
from the Hox2 locus. ).
Length = 301
Score = 33.5 bits (73), Expect = 0.58
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 1 GKDSRASPGCSRQSPGDQQDQTGCHLPEAPQGMV 102
G+ A PGC +++ GD DQ+ C PEA V
Sbjct: 266 GRVPPAPPGCPKEAAGDASDQSTCTSPEASPSSV 299
>AF287350-1|AAG31762.1| 108|Homo sapiens homeobox B1 protein.
Length = 108
Score = 33.5 bits (73), Expect = 0.58
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 1 GKDSRASPGCSRQSPGDQQDQTGCHLPEAPQGMV 102
G+ A PGC +++ GD DQ+ C PEA V
Sbjct: 73 GRVPPAPPGCPKEAAGDASDQSTCTSPEASPSSV 106
>AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast cancer
1 protein.
Length = 1013
Score = 33.1 bits (72), Expect = 0.76
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 327 LSPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSLMRSGKVLRA 482
+ PH A L G G Q K ++T P++R P L +F ++M +G + RA
Sbjct: 560 IQPHGAKLLEELGTGLIQQYKPDSTTAPDQRAPVLLVVMFWTMMLNGPLPRA 611
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,089,446
Number of Sequences: 237096
Number of extensions: 1955543
Number of successful extensions: 4758
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4757
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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