Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0958
(593 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 228 4e-60
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 228 4e-60
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 228 4e-60
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 126 3e-29
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 57 2e-08
BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p pro... 31 0.89
AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic ... 31 0.89
AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB... 31 0.89
AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA... 31 0.89
BT003309-1|AAO25069.1| 311|Drosophila melanogaster GH05823p pro... 28 8.3
AY051968-1|AAK93392.1| 1057|Drosophila melanogaster LD43457p pro... 28 8.3
AE013599-2927|AAM68421.1| 404|Drosophila melanogaster CG9218-PB... 28 8.3
AE013599-80|AAF57329.3| 1057|Drosophila melanogaster CG30440-PA ... 28 8.3
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 228 bits (558), Expect = 4e-60
Identities = 102/154 (66%), Positives = 127/154 (82%)
Frame = +2
Query: 8 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 187
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+G
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRG 209
Query: 188 PLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGS 367
PL++++KD+GL +AFRNIPG+E APGGH+GRFVIWT+SAF RL+ LFG+
Sbjct: 210 PLVVYDKDEGLRKAFRNIPGIETINVDKLNVLKLAPGGHVGRFVIWTESAFARLNDLFGT 269
Query: 368 WKTPSKQKKNFNLPQPKMANTDLTRILKSDEIRE 469
WK PS KK +NLPQPKMANTDL+R+LKS+EIR+
Sbjct: 270 WKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRK 303
Score = 62.5 bits (145), Expect = 4e-10
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +3
Query: 423 PTLTSHVFSSLMRSG---KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
P + + S L++S KVLR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A L
Sbjct: 285 PKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAAL 344
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 228 bits (558), Expect = 4e-60
Identities = 102/154 (66%), Positives = 127/154 (82%)
Frame = +2
Query: 8 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 187
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+G
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRG 209
Query: 188 PLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGS 367
PL++++KD+GL +AFRNIPG+E APGGH+GRFVIWT+SAF RL+ LFG+
Sbjct: 210 PLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFGT 269
Query: 368 WKTPSKQKKNFNLPQPKMANTDLTRILKSDEIRE 469
WK PS KK +NLPQPKMANTDL+R+LKS+EIR+
Sbjct: 270 WKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRK 303
Score = 62.5 bits (145), Expect = 4e-10
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +3
Query: 423 PTLTSHVFSSLMRSG---KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
P + + S L++S KVLR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A L
Sbjct: 285 PKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAAL 344
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 228 bits (558), Expect = 4e-60
Identities = 102/154 (66%), Positives = 127/154 (82%)
Frame = +2
Query: 8 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 187
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+G
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRG 209
Query: 188 PLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGS 367
PL++++KD+GL +AFRNIPG+E APGGH+GRFVIWT+SAF RL+ LFG+
Sbjct: 210 PLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFGT 269
Query: 368 WKTPSKQKKNFNLPQPKMANTDLTRILKSDEIRE 469
WK PS KK +NLPQPKMANTDL+R+LKS+EIR+
Sbjct: 270 WKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRK 303
Score = 62.5 bits (145), Expect = 4e-10
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +3
Query: 423 PTLTSHVFSSLMRSG---KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL 593
P + + S L++S KVLR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A L
Sbjct: 285 PKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAAL 344
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 126 bits (303), Expect = 3e-29
Identities = 55/79 (69%), Positives = 70/79 (88%)
Frame = +2
Query: 8 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 187
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+G
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRG 209
Query: 188 PLIIFNKDQGLTRAFRNIP 244
PL++++KD+GL +AFRNIP
Sbjct: 210 PLVVYDKDEGLRKAFRNIP 228
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 57.2 bits (132), Expect = 2e-08
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +2
Query: 8 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 115
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI K
Sbjct: 88 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 123
>BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p
protein.
Length = 1823
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 332 SAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIREG 472
S G + +G W+ +Q+K P+PK N + ++ S E R+G
Sbjct: 588 SGGGGDEECYGGWEQQQQQQKQSQPPRPKRPNGKMLQMQNSTESRDG 634
>AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic
protein encore protein.
Length = 1548
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 332 SAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIREG 472
S G + +G W+ +Q+K P+PK N + ++ S E R+G
Sbjct: 439 SGGGGDEECYGGWEQQQQQQKQSQPPRPKRPNGKMLQMQNSTESRDG 485
>AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB,
isoform B protein.
Length = 1818
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 332 SAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIREG 472
S G + +G W+ +Q+K P+PK N + ++ S E R+G
Sbjct: 583 SGGGGDEECYGGWEQQQQQQKQSQPPRPKRPNGKMLQMQNSTESRDG 629
>AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA,
isoform A protein.
Length = 1823
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 332 SAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRILKSDEIREG 472
S G + +G W+ +Q+K P+PK N + ++ S E R+G
Sbjct: 588 SGGGGDEECYGGWEQQQQQQKQSQPPRPKRPNGKMLQMQNSTESRDG 634
>BT003309-1|AAO25069.1| 311|Drosophila melanogaster GH05823p
protein.
Length = 311
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -3
Query: 339 NAD*VQMTKRPRWPPGASFRRFSLLTFRSSTPGMLRKARVRP*SLLK 199
NA Q + P PGA+F F + ++TP + A + P L+K
Sbjct: 100 NAGLYQTNEPPLLGPGAAFPPFGAPEYHTTTPENWKGAAIHPTGLMK 146
>AY051968-1|AAK93392.1| 1057|Drosophila melanogaster LD43457p
protein.
Length = 1057
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/84 (22%), Positives = 35/84 (41%)
Frame = -2
Query: 322 DDETSKMASRSQLQEVQLVNIQELHTGDVAEGASQTLILVEDYEGSLTLDTTTVAHFTLT 143
DD+ +++ N+Q LH E S+ IL+ E + + T ++ T
Sbjct: 531 DDDGCSYLDEGLSVDIKSKNVQSLHESGTDEKLSRKTILLARTEDTNDV-TQGISDGTTY 589
Query: 142 STKTLRLVHLKDIRPCLEAPQEDD 71
T +L + HL + PQ+ +
Sbjct: 590 FTGSLNITHLPKSNEIFKKPQDPE 613
>AE013599-2927|AAM68421.1| 404|Drosophila melanogaster CG9218-PB,
isoform B protein.
Length = 404
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -3
Query: 339 NAD*VQMTKRPRWPPGASFRRFSLLTFRSSTPGMLRKARVRP*SLLK 199
NA Q + P PGA+F F + ++TP + A + P L+K
Sbjct: 100 NAGLYQTNEPPLLGPGAAFPPFGAPEYHTTTPENWKGAAIHPTGLMK 146
>AE013599-80|AAF57329.3| 1057|Drosophila melanogaster CG30440-PA
protein.
Length = 1057
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/84 (22%), Positives = 35/84 (41%)
Frame = -2
Query: 322 DDETSKMASRSQLQEVQLVNIQELHTGDVAEGASQTLILVEDYEGSLTLDTTTVAHFTLT 143
DD+ +++ N+Q LH E S+ IL+ E + + T ++ T
Sbjct: 531 DDDGCSYLDEGLSVDIKSKNVQSLHESGTDEKLSRKTILLARTEDTNDV-TQGISDGTTY 589
Query: 142 STKTLRLVHLKDIRPCLEAPQEDD 71
T +L + HL + PQ+ +
Sbjct: 590 FTGSLNITHLPKSNEIFKKPQDPE 613
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,302,795
Number of Sequences: 53049
Number of extensions: 593301
Number of successful extensions: 1621
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1608
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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