Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0955
(673 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023828-10|CAA19447.1| 247|Caenorhabditis elegans Hypothetical... 285 1e-77
U23081-1|AAA79846.1| 247|Caenorhabditis elegans triosephosphate... 283 8e-77
U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related... 32 0.43
U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related... 32 0.43
AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-relat... 32 0.43
Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ... 30 1.7
U58760-4|AAK31462.2| 678|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math ... 29 3.0
U97011-5|AAO12451.1| 168|Caenorhabditis elegans Hypothetical pr... 29 4.0
U97011-4|AAQ65202.1| 273|Caenorhabditis elegans Hypothetical pr... 29 4.0
U97011-3|AAQ65201.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.0
U13645-6|AAV34802.1| 457|Caenorhabditis elegans Hypothetical pr... 29 4.0
U13645-5|AAM15541.1| 425|Caenorhabditis elegans Hypothetical pr... 29 4.0
U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical... 28 5.3
Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81081-1|CAB03090.1| 464|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF016418-2|AAK18901.1| 893|Caenorhabditis elegans Hypothetical ... 28 6.9
Z81146-5|CAB03522.3| 699|Caenorhabditis elegans Hypothetical pr... 27 9.2
>AL023828-10|CAA19447.1| 247|Caenorhabditis elegans Hypothetical
protein Y17G7B.7 protein.
Length = 247
Score = 285 bits (700), Expect = 1e-77
Identities = 140/224 (62%), Positives = 170/224 (75%)
Frame = +2
Query: 2 VGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEVAAQNCW 181
VGGNWKMNGD ++ IV L + +V+V+V PA YL+Y K+ + V VAAQNC+
Sbjct: 7 VGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLVAAQNCY 66
Query: 182 KSPKGAFTGEISPAMIKDVGVNXVILGHSERRTIFGEKDELVAEKVAHALESGLKVIACI 361
K PKGAFTGEISPAMIKD+G+ VILGHSERR +FGE D L+AEK HALE+G+KV+ CI
Sbjct: 67 KVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCI 126
Query: 362 GETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVHH 541
GE LEERE+G T++V FRQL+A+V G WENIV+AYEPVWAIGTGKTA+ +QAQ+VH
Sbjct: 127 GEKLEEREAGHTKDVNFRQLQAIVDK-GVSWENIVIAYEPVWAIGTGKTASGEQAQEVHE 185
Query: 542 ALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFL 673
+R +L VS +V+DA RI YGGSVTA NA EL DIDGFL
Sbjct: 186 WIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFL 229
>U23081-1|AAA79846.1| 247|Caenorhabditis elegans triosephosphate
isomerase protein.
Length = 247
Score = 283 bits (694), Expect = 8e-77
Identities = 138/224 (61%), Positives = 170/224 (75%)
Frame = +2
Query: 2 VGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEVAAQNCW 181
VGGNWKMNGD ++ IV L + +V+V+V PA YL+Y K+ + V VAAQNC+
Sbjct: 7 VGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLVAAQNCY 66
Query: 182 KSPKGAFTGEISPAMIKDVGVNXVILGHSERRTIFGEKDELVAEKVAHALESGLKVIACI 361
K PKGAFTGEISPAMIKD+G+ VILGHSERR +FGE D L+AEK HALE+G+KV+ CI
Sbjct: 67 KVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCI 126
Query: 362 GETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVHH 541
GE LEERE+G T++V FRQL+A+V G WENIV+AYEPVWAIGTGKTA+ +QAQ+VH
Sbjct: 127 GEKLEEREAGHTKDVNFRQLQAIVDK-GVSWENIVIAYEPVWAIGTGKTASGEQAQEVHE 185
Query: 542 ALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFL 673
+R +L VS +V+DA RI YGGSVTA NA ++ DIDGFL
Sbjct: 186 WIRAFLKEKVSPAVADATRIIYGGSVTADNAADVGKKPDIDGFL 229
>U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related
protein protein1, isoform a protein.
Length = 705
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 35 NQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVE 160
++INE+V+ + K L P E++ + AI L+Y+ T P+ E
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE 505
>U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related
protein protein1, isoform b protein.
Length = 712
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 35 NQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVE 160
++INE+V+ + K L P E++ + AI L+Y+ T P+ E
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE 505
>AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-related
protein protein.
Length = 705
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 35 NQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVE 160
++INE+V+ + K L P E++ + AI L+Y+ T P+ E
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE 505
>Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical
protein F35G12.4b protein.
Length = 680
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +2
Query: 455 ENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSD--AVRIQYGGSVTAA 628
EN Y P W + K+ Q D AL +WLS+ +G + ++ YGG + +
Sbjct: 440 ENSRQVYIPSWFVVDSKSGMLQITLDELDALSSWLSSKDAGFDDNDRETKLNYGGMMLRS 499
Query: 629 NAKELASCK 655
+ CK
Sbjct: 500 LFERWPPCK 508
>Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical
protein F35G12.4a protein.
Length = 683
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +2
Query: 455 ENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSD--AVRIQYGGSVTAA 628
EN Y P W + K+ Q D AL +WLS+ +G + ++ YGG + +
Sbjct: 440 ENSRQVYIPSWFVVDSKSGMLQITLDELDALSSWLSSKDAGFDDNDRETKLNYGGMMLRS 499
Query: 629 NAKELASCK 655
+ CK
Sbjct: 500 LFERWPPCK 508
>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
protein R10F2.1 protein.
Length = 2779
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 482 VWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRIQYGGS 616
V+++ TG+ T AQ HH + ++++VS S SDA+R+ G S
Sbjct: 2612 VYSVKTGEIRTLSDAQHHHHHPTHSMTSSVSTS-SDALRMVRGSS 2655
>U58760-4|AAK31462.2| 678|Caenorhabditis elegans Hypothetical
protein C27A2.4 protein.
Length = 678
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 259 KYNPIYSNVFDHSG*NFTSKSSFWRLPTVLGC 164
K N ++S + +H+G + +FWR+P L C
Sbjct: 171 KVNSLFSKLSEHTG-EVINADNFWRIPDTLRC 201
>AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math
domain containingprotein 47 protein.
Length = 683
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 26 GDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIP 148
GD N I+++++ +EV+ G PAI+ + V+ I+P
Sbjct: 47 GDSNYQEHIISDVEPQDFQKFLEVVHGEPAIFEATVQKILP 87
>U97011-5|AAO12451.1| 168|Caenorhabditis elegans Hypothetical
protein F31F7.1b protein.
Length = 168
Score = 28.7 bits (61), Expect = 4.0
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = -1
Query: 400 LSLARFSLFESLTNTGNDF---QARFKGMSN-LFSNKFIFFTK-NCSSFRMTKYNPIYSN 236
L+L R S + L + GN + + R +G+SN LF K NC+ F K +P+Y+
Sbjct: 73 LALQRNSDGKKLYSIGNYYCVPEWRGRGVSNKLFVQVMKHVGKENCTLFGAVKMSPLYAT 132
Query: 235 VFDHSG*NFTSKSSFWRL 182
F NF + FW +
Sbjct: 133 RF-----NFALMNEFWHM 145
>U97011-4|AAQ65202.1| 273|Caenorhabditis elegans Hypothetical
protein F31F7.1c protein.
Length = 273
Score = 28.7 bits (61), Expect = 4.0
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = -1
Query: 400 LSLARFSLFESLTNTGNDF---QARFKGMSN-LFSNKFIFFTK-NCSSFRMTKYNPIYSN 236
L+L R S + L + GN + + R +G+SN LF K NC+ F K +P+Y+
Sbjct: 73 LALQRNSDGKKLYSIGNYYCVPEWRGRGVSNKLFVQVMKHVGKENCTLFGAVKMSPLYAT 132
Query: 235 VFDHSG*NFTSKSSFWRL 182
F NF + FW +
Sbjct: 133 RF-----NFALMNEFWHM 145
>U97011-3|AAQ65201.1| 316|Caenorhabditis elegans Hypothetical
protein F31F7.1a protein.
Length = 316
Score = 28.7 bits (61), Expect = 4.0
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = -1
Query: 400 LSLARFSLFESLTNTGNDF---QARFKGMSN-LFSNKFIFFTK-NCSSFRMTKYNPIYSN 236
L+L R S + L + GN + + R +G+SN LF K NC+ F K +P+Y+
Sbjct: 73 LALQRNSDGKKLYSIGNYYCVPEWRGRGVSNKLFVQVMKHVGKENCTLFGAVKMSPLYAT 132
Query: 235 VFDHSG*NFTSKSSFWRL 182
F NF + FW +
Sbjct: 133 RF-----NFALMNEFWHM 145
>U13645-6|AAV34802.1| 457|Caenorhabditis elegans Hypothetical
protein C05D10.1c protein.
Length = 457
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 604 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 485
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 191 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 230
>U13645-5|AAM15541.1| 425|Caenorhabditis elegans Hypothetical
protein C05D10.1b protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 604 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 485
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 159 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 198
>U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical
protein C05D10.1a protein.
Length = 529
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 604 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 485
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 263 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 302
>AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical
protein K07H8.1 protein.
Length = 493
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 372 SKRENLARLRKLFLDN*KL*YRPLVTNGK-ILCLPMNLYGLLV 497
+K+ N+ +L + LDN + + P + + ILC +NLYG L+
Sbjct: 112 AKQSNIEKLINIVLDNRSVGFPPSSDSPQFILCRELNLYGNLL 154
>Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical
protein F54F12.1 protein.
Length = 1217
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +2
Query: 383 ESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLS 562
+S ++ + + LKAL IG + L+Y+ + + +GK + Q V+H NW+
Sbjct: 181 QSIQSSQSLLPVLKALRKVIGSHVNGLELSYKYIAGLPSGKLDLEELIQAVYH---NWIK 237
Query: 563 ANV 571
+
Sbjct: 238 NRI 240
>Z81081-1|CAB03090.1| 464|Caenorhabditis elegans Hypothetical
protein F42D1.2 protein.
Length = 464
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/72 (22%), Positives = 31/72 (43%)
Frame = +2
Query: 158 EVAAQNCWKSPKGAFTGEISPAMIKDVGVNXVILGHSERRTIFGEKDELVAEKVAHALES 337
E+A Q +S PA+ ++ +S +F D ++A +HAL+
Sbjct: 94 EIAVQAMHESVSSHMFDGYGPAVGALAAREAIVERYSSADNVFTADDVVLASGCSHALQM 153
Query: 338 GLKVIACIGETL 373
++ +A GE +
Sbjct: 154 AIEAVANAGENI 165
>AF016418-2|AAK18901.1| 893|Caenorhabditis elegans Hypothetical
protein C49G7.7 protein.
Length = 893
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 14 WKMNGDKNQINEIVNNLKKGPLDPNVEVI 100
W++NGD+ ++EI N+ LD +V VI
Sbjct: 83 WEINGDRETLSEIQNHNSYRDLDMDVLVI 111
>Z81146-5|CAB03522.3| 699|Caenorhabditis elegans Hypothetical
protein K10D11.3 protein.
Length = 699
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 459 FSHLSPMADTKAFNCLKTTSSVLPDSLSSRVSPIQAMTFKPD 334
+ ++ ++ TK C TS P +L++ P+ AMT PD
Sbjct: 451 YYNVQSLSATKGVTCWSDTSC--PVTLNAAKGPVSAMTLNPD 490
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,257,380
Number of Sequences: 27780
Number of extensions: 343227
Number of successful extensions: 1145
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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