BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0955 (673 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isome... 348 2e-98 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 1.5 DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 23 2.6 AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 23 2.6 AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 23 2.6 AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 6.1 AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 6.1 >EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isomerase protein. Length = 247 Score = 348 bits (856), Expect = 2e-98 Identities = 163/224 (72%), Positives = 191/224 (85%) Frame = +2 Query: 2 VGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEVAAQNCW 181 VGGNWKMNG K++IN+IV LKKGPLD NVEV+VGVP+IYL+Y K I+P+N+ +A QN + Sbjct: 7 VGGNWKMNGTKSEINDIVGFLKKGPLDSNVEVVVGVPSIYLTYAKNILPNNISIAGQNTY 66 Query: 182 KSPKGAFTGEISPAMIKDVGVNXVILGHSERRTIFGEKDELVAEKVAHALESGLKVIACI 361 K KGAFTGEISPAM+ D G+ VILGHSERR IFGE DEL+AEKVAHALESGLKVIACI Sbjct: 67 KVAKGAFTGEISPAMLLDNGIPWVILGHSERRNIFGENDELIAEKVAHALESGLKVIACI 126 Query: 362 GETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVHH 541 GE LEERE+GKT+EVVFRQ KA+ + I + W+N+V+AYEPVWAIGTGKTATPQQAQ+VH Sbjct: 127 GEKLEEREAGKTDEVVFRQTKAIANKI-NSWDNVVVAYEPVWAIGTGKTATPQQAQEVHE 185 Query: 542 ALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFL 673 LRNW S NV+ +V++ VRI YGGSVTA NAK+LA KDIDGFL Sbjct: 186 KLRNWFSKNVNQTVAETVRIIYGGSVTAGNAKDLAKEKDIDGFL 229 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 23.8 bits (49), Expect = 1.5 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -3 Query: 377 LRESHQYRQ*LSSQIQGHEQPFQQQ 303 L+ H + Q S+ +Q H +P+QQQ Sbjct: 144 LQNHHHHLQ--STAVQDHHRPYQQQ 166 >DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3 protein. Length = 130 Score = 23.0 bits (47), Expect = 2.6 Identities = 9/30 (30%), Positives = 17/30 (56%) Frame = +2 Query: 392 KTEEVVFRQLKALVSAIGDKWENIVLAYEP 481 K EV+ + +K LV + W+++ Y+P Sbjct: 82 KQREVIKKVIKFLVENKPELWDSLANKYDP 111 >AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein protein. Length = 130 Score = 23.0 bits (47), Expect = 2.6 Identities = 9/30 (30%), Positives = 17/30 (56%) Frame = +2 Query: 392 KTEEVVFRQLKALVSAIGDKWENIVLAYEP 481 K EV+ + +K LV + W+++ Y+P Sbjct: 82 KQREVIKKVIKFLVENKPELWDSLANKYDP 111 >AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific protein 3c precursor protein. Length = 130 Score = 23.0 bits (47), Expect = 2.6 Identities = 9/30 (30%), Positives = 17/30 (56%) Frame = +2 Query: 392 KTEEVVFRQLKALVSAIGDKWENIVLAYEP 481 K EV+ + +K LV + W+++ Y+P Sbjct: 82 KQREVIKKVIKFLVENKPELWDSLANKYDP 111 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 21.8 bits (44), Expect = 6.1 Identities = 6/26 (23%), Positives = 15/26 (57%) Frame = +2 Query: 98 IVGVPAIYLSYVKTIIPDNVEVAAQN 175 ++G P+ + Y +IP+ ++ +N Sbjct: 848 VIGTPSTGMMYKPFLIPEQTSISHEN 873 >AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein 75 protein. Length = 900 Score = 21.8 bits (44), Expect = 6.1 Identities = 9/35 (25%), Positives = 19/35 (54%) Frame = -3 Query: 407 QLPQSCQILSLRESHQYRQ*LSSQIQGHEQPFQQQ 303 ++ + Q + ++ HQ +Q + + +QP QQQ Sbjct: 410 KMTEQQQQMQAQQQHQQQQQQTQHVINAQQPQQQQ 444 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 184,165 Number of Sequences: 438 Number of extensions: 4163 Number of successful extensions: 11 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20343105 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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