BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0953 (698 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q13951 Cluster: Core-binding factor subunit beta; n=42;... 187 3e-46 UniRef50_Q4H3S2 Cluster: Core-binding factor, b subunit; n=1; Ci... 154 2e-36 UniRef50_UPI0000E24525 Cluster: PREDICTED: hypothetical protein ... 90 4e-17 UniRef50_Q4RCC9 Cluster: Chromosome undetermined SCAF19216, whol... 83 6e-15 UniRef50_UPI000155C339 Cluster: PREDICTED: similar to core-bindi... 66 8e-10 UniRef50_A4KUC1 Cluster: Tlm Orf16; n=9; Bacteria|Rep: Tlm Orf16... 38 0.24 UniRef50_Q21660 Cluster: Putative uncharacterized protein; n=2; ... 34 2.9 UniRef50_Q4P6A9 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9 UniRef50_Q034X9 Cluster: Predicted transcriptional regulator; n=... 33 5.1 UniRef50_Q9AYC9 Cluster: Putative uncharacterized protein OSJNBa... 33 5.1 UniRef50_Q4DHE6 Cluster: Putative uncharacterized protein; n=2; ... 33 5.1 UniRef50_A6S9B3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1 UniRef50_A0D964 Cluster: Chromosome undetermined scaffold_41, wh... 33 6.7 UniRef50_Q8G450 Cluster: Possible extracellular exo-xylanase; n=... 33 8.9 UniRef50_Q2RKM1 Cluster: ABC transporter substrate-binding prote... 33 8.9 >UniRef50_Q13951 Cluster: Core-binding factor subunit beta; n=42; Eumetazoa|Rep: Core-binding factor subunit beta - Homo sapiens (Human) Length = 182 Score = 187 bits (455), Expect = 3e-46 Identities = 85/162 (52%), Positives = 115/162 (70%), Gaps = 8/162 (4%) Frame = +3 Query: 222 MPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGT 401 MPRVVPDQ++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EIAF T Sbjct: 1 MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVAT 60 Query: 402 GTNLQLVFDHSPY--------NNRGCDFQKENGKAHIVSRFIMNGVCVRWRGWIDLERLD 557 GTNL L F + + + D ++E GK ++ + I+NGVCV W+GWIDL+RLD Sbjct: 61 GTNLSLQFFPASWQGEQRQTPSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLQRLD 120 Query: 558 GAGCLELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYRE 683 G GCLE DEERA EDA + E +R R+FED+ R++RE Sbjct: 121 GMGCLEFDEERAQQEDALAQQAFEEARRRTREFEDRDRSHRE 162 >UniRef50_Q4H3S2 Cluster: Core-binding factor, b subunit; n=1; Ciona intestinalis|Rep: Core-binding factor, b subunit - Ciona intestinalis (Transparent sea squirt) Length = 181 Score = 154 bits (374), Expect = 2e-36 Identities = 74/168 (44%), Positives = 108/168 (64%), Gaps = 8/168 (4%) Frame = +3 Query: 213 IFKMPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAF 392 + KMPRVV DQ+A ++S++LF+RLSR++E++YTGYRDR EERQ+RF + CR G EIAF Sbjct: 2 LLKMPRVVSDQRATYDSNELFRRLSRDTEIKYTGYRDRGTEERQLRFQNSCRAGRAEIAF 61 Query: 393 TGTGTNLQLVF-DHSPYNNRG-------CDFQKENGKAHIVSRFIMNGVCVRWRGWIDLE 548 G+GTN L F S +G +F +E GK H+ + FI+NGVCV W+GW+DL Sbjct: 62 VGSGTNFTLQFYPWSVEGGQGITPPKDYVNFDREPGKVHLKAPFILNGVCVCWKGWMDLH 121 Query: 549 RLDGAGCLELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGG 692 RL+G G + DEERA +E ++++ + + + + + GG Sbjct: 122 RLEGMGSIVYDEERAQLEATRQGGSMQQHMHKTSNPKTQNHKHPATGG 169 >UniRef50_UPI0000E24525 Cluster: PREDICTED: hypothetical protein LOC468115, partial; n=1; Pan troglodytes|Rep: PREDICTED: hypothetical protein LOC468115, partial - Pan troglodytes Length = 197 Score = 90.2 bits (214), Expect = 4e-17 Identities = 36/56 (64%), Positives = 49/56 (87%) Frame = +3 Query: 219 KMPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEI 386 KMPRVVPDQ++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EI Sbjct: 71 KMPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEI 126 Score = 50.4 bits (115), Expect = 4e-05 Identities = 21/33 (63%), Positives = 28/33 (84%) Frame = +3 Query: 222 MPRVVPDQKAKFESDDLFKRLSRESEVRYTGYR 320 MPRVVPDQ++KFE+++ F++LSRE EVR G R Sbjct: 1 MPRVVPDQRSKFENEEFFRKLSRECEVRQAGGR 33 >UniRef50_Q4RCC9 Cluster: Chromosome undetermined SCAF19216, whole genome shotgun sequence; n=6; Euteleostomi|Rep: Chromosome undetermined SCAF19216, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 76 Score = 83.0 bits (196), Expect = 6e-15 Identities = 37/69 (53%), Positives = 48/69 (69%) Frame = +3 Query: 477 KAHIVSRFIMNGVCVRWRGWIDLERLDGAGCLELDEERAAIEDAALRDQIERYNQRLRDF 656 + ++ + I+NGVCV W+GWIDL RLDG G LE DEERA EDA + E +R RDF Sbjct: 1 QVYLKAPMILNGVCVIWKGWIDLHRLDGMGYLEYDEERAQHEDALAQAAFEEARRRNRDF 60 Query: 657 EDKQRAYRE 683 ED+ R++RE Sbjct: 61 EDRDRSHRE 69 >UniRef50_UPI000155C339 Cluster: PREDICTED: similar to core-binding factor, beta subunit, partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to core-binding factor, beta subunit, partial - Ornithorhynchus anatinus Length = 117 Score = 66.1 bits (154), Expect = 8e-10 Identities = 27/42 (64%), Positives = 33/42 (78%) Frame = +3 Query: 300 VRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGTGTNLQLVF 425 ++YTG+RDRP EERQ RF + CR+G +EIAF TGTNL L F Sbjct: 1 IKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLSLQF 42 >UniRef50_A4KUC1 Cluster: Tlm Orf16; n=9; Bacteria|Rep: Tlm Orf16 - Streptoalloteichus hindustanus Length = 189 Score = 37.9 bits (84), Expect = 0.24 Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 2/115 (1%) Frame = +3 Query: 237 PDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGT--GTN 410 P++ + L +RLS + R PE + EG+ + FT T GT Sbjct: 75 PEEVPADPTPSLVERLSAAEQPIEASLR---PERTASALRAAIDEGYVIVRFTETRGGTE 131 Query: 411 LQLVFDHSPYNNRGCDFQKENGKAHIVSRFIMNGVCVRWRGWIDLERLDGAGCLE 575 L + D + G DF +G+ +V ++ VR IDL L G G LE Sbjct: 132 LGIQLDQGATDLAGADFAAGSGEVTLVGTLTLDFEPVRCVARIDLATLAGQGRLE 186 >UniRef50_Q21660 Cluster: Putative uncharacterized protein; n=2; Caenorhabditis|Rep: Putative uncharacterized protein - Caenorhabditis elegans Length = 382 Score = 34.3 bits (75), Expect = 2.9 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +3 Query: 474 GKAHIVSRFIMNGVCVRWRGWIDLERLDGAGCLELDEERAA 596 GK H+V++FI G +RW W+ R G G DEE+ A Sbjct: 286 GKIHVVTKFIKAGRKLRW--WVRGNRNFGLGVFHSDEEQVA 324 >UniRef50_Q4P6A9 Cluster: Putative uncharacterized protein; n=1; Ustilago maydis|Rep: Putative uncharacterized protein - Ustilago maydis (Smut fungus) Length = 1207 Score = 34.3 bits (75), Expect = 2.9 Identities = 19/79 (24%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Frame = -1 Query: 536 PTSPSYTNTVHDESGYDVSFSIFLLKVAATVVVG*V-IEDKLKVCAGTGKRYLGVSLAAT 360 P+ +T+ ++ V+ IF + +A +VV + +DK + A + + S++A+ Sbjct: 346 PSKVPFTSPLYGVIAISVAVGIFFMTIAHGLVVRSIKAKDKKRAAAIAAQEKVRGSISAS 405 Query: 359 AHESHLAFFGRPVSVSSVS 303 + E+H+ FG P ++S++ Sbjct: 406 SSETHIDGFGLPPKMASLA 424 >UniRef50_Q034X9 Cluster: Predicted transcriptional regulator; n=1; Lactobacillus casei ATCC 334|Rep: Predicted transcriptional regulator - Lactobacillus casei (strain ATCC 334) Length = 343 Score = 33.5 bits (73), Expect = 5.1 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +3 Query: 240 DQKAKFESDD-LFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGTGTNLQ 416 D++A + D+ F R + T +R +P + RF G + HT + G NL+ Sbjct: 190 DEQADDDPDEGKFVRFRLDYMRNITYHRQQPTHDHDERFRGGRLQNHTWYPYLGKPINLE 249 Query: 417 LVFDHSP 437 +++ + P Sbjct: 250 ILYSYDP 256 >UniRef50_Q9AYC9 Cluster: Putative uncharacterized protein OSJNBa0094H10.6; n=2; Oryza sativa|Rep: Putative uncharacterized protein OSJNBa0094H10.6 - Oryza sativa (Rice) Length = 367 Score = 33.5 bits (73), Expect = 5.1 Identities = 22/78 (28%), Positives = 32/78 (41%) Frame = +1 Query: 271 SSKDLAEKVRSDTLDTETGLPKNARCDS*AVAARDTPR*RLPVPAQTFSLSSITHPTTTV 450 SS ++ R ++ + K RC + + R R P T SL S T P+T Sbjct: 95 SSPSVSPPFRGESTGDASSPAKQWRCRHCSTSGRHCRVSRAPADVATTSLGSATPPSTPA 154 Query: 451 AATFKRKMEKLTSYPDSS 504 A F+R + P SS Sbjct: 155 APRFRRNAVAAPASPSSS 172 >UniRef50_Q4DHE6 Cluster: Putative uncharacterized protein; n=2; Trypanosoma cruzi|Rep: Putative uncharacterized protein - Trypanosoma cruzi Length = 703 Score = 33.5 bits (73), Expect = 5.1 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = +3 Query: 480 AHIVSRFIMNGVCVRWRGWIDLERLDGAGCLELD--EERAAIEDAALRDQIERYNQRLRD 653 + +V F + GVC WID D LE+D R+ E AA ++ Y + D Sbjct: 83 SELVCAFFLRGVCHVKLSWIDKAIADFTAALEIDPSHSRSTYERAACHNRKGNYTAAILD 142 Query: 654 FE 659 +E Sbjct: 143 YE 144 >UniRef50_A6S9B3 Cluster: Putative uncharacterized protein; n=1; Botryotinia fuckeliana B05.10|Rep: Putative uncharacterized protein - Botryotinia fuckeliana B05.10 Length = 835 Score = 33.5 bits (73), Expect = 5.1 Identities = 25/103 (24%), Positives = 46/103 (44%) Frame = +3 Query: 147 DPSPLAGMLPFDSIYEQPKPRFIFKMPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDR 326 D P + ++ I ++ P + + +PD A + +DLF +++ + G++D Sbjct: 538 DSPPPSYLIKSPGIIDRTLPYPNRREDKSLPDVAA-VQPEDLF-----DADDIFFGFQDM 591 Query: 327 PPEERQMRFMSGCREGHTEIAFTGTGTNLQLVFDHSPYNNRGC 455 P ER+++ + T G+G L FDH PY C Sbjct: 592 TPHEREVQDRLDAEKEATRANSYGSGFRAPLHFDHCPYTAPIC 634 >UniRef50_A0D964 Cluster: Chromosome undetermined scaffold_41, whole genome shotgun sequence; n=1; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_41, whole genome shotgun sequence - Paramecium tetraurelia Length = 460 Score = 33.1 bits (72), Expect = 6.7 Identities = 14/32 (43%), Positives = 23/32 (71%) Frame = +3 Query: 576 LDEERAAIEDAALRDQIERYNQRLRDFEDKQR 671 L++E A+ + +R Q E YNQRLR++ED+ + Sbjct: 141 LEQENVAMRNEFIRGQ-ESYNQRLREYEDRNK 171 >UniRef50_Q8G450 Cluster: Possible extracellular exo-xylanase; n=1; Bifidobacterium longum|Rep: Possible extracellular exo-xylanase - Bifidobacterium longum Length = 958 Score = 32.7 bits (71), Expect = 8.9 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +2 Query: 356 ERLPRGTHRDSVYRYRHKPSACLRSLTLQQPWLRLSKG 469 E P G++ D V+ + H P SLT ++ WLRL+ G Sbjct: 572 EYQPNGSNLDLVWEWGHNPDNRYWSLTDREGWLRLTNG 609 >UniRef50_Q2RKM1 Cluster: ABC transporter substrate-binding protein precursor; n=3; Bacteria|Rep: ABC transporter substrate-binding protein precursor - Moorella thermoacetica (strain ATCC 39073) Length = 358 Score = 32.7 bits (71), Expect = 8.9 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +3 Query: 522 RWRGWIDLERLDGAGCLELDEERAAIEDAALRD 620 RW W+ ++ G L +D++RAA+ED A +D Sbjct: 72 RWGKWLGVDITWYDGALSVDKQRAAVEDMATKD 104 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 716,280,369 Number of Sequences: 1657284 Number of extensions: 15344416 Number of successful extensions: 46787 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 44894 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 46773 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 55371905986 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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