Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0953
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q13951 Cluster: Core-binding factor subunit beta; n=42;... 187 3e-46
UniRef50_Q4H3S2 Cluster: Core-binding factor, b subunit; n=1; Ci... 154 2e-36
UniRef50_UPI0000E24525 Cluster: PREDICTED: hypothetical protein ... 90 4e-17
UniRef50_Q4RCC9 Cluster: Chromosome undetermined SCAF19216, whol... 83 6e-15
UniRef50_UPI000155C339 Cluster: PREDICTED: similar to core-bindi... 66 8e-10
UniRef50_A4KUC1 Cluster: Tlm Orf16; n=9; Bacteria|Rep: Tlm Orf16... 38 0.24
UniRef50_Q21660 Cluster: Putative uncharacterized protein; n=2; ... 34 2.9
UniRef50_Q4P6A9 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_Q034X9 Cluster: Predicted transcriptional regulator; n=... 33 5.1
UniRef50_Q9AYC9 Cluster: Putative uncharacterized protein OSJNBa... 33 5.1
UniRef50_Q4DHE6 Cluster: Putative uncharacterized protein; n=2; ... 33 5.1
UniRef50_A6S9B3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_A0D964 Cluster: Chromosome undetermined scaffold_41, wh... 33 6.7
UniRef50_Q8G450 Cluster: Possible extracellular exo-xylanase; n=... 33 8.9
UniRef50_Q2RKM1 Cluster: ABC transporter substrate-binding prote... 33 8.9
>UniRef50_Q13951 Cluster: Core-binding factor subunit beta; n=42;
Eumetazoa|Rep: Core-binding factor subunit beta - Homo
sapiens (Human)
Length = 182
Score = 187 bits (455), Expect = 3e-46
Identities = 85/162 (52%), Positives = 115/162 (70%), Gaps = 8/162 (4%)
Frame = +3
Query: 222 MPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGT 401
MPRVVPDQ++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EIAF T
Sbjct: 1 MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVAT 60
Query: 402 GTNLQLVFDHSPY--------NNRGCDFQKENGKAHIVSRFIMNGVCVRWRGWIDLERLD 557
GTNL L F + + + D ++E GK ++ + I+NGVCV W+GWIDL+RLD
Sbjct: 61 GTNLSLQFFPASWQGEQRQTPSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLQRLD 120
Query: 558 GAGCLELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYRE 683
G GCLE DEERA EDA + E +R R+FED+ R++RE
Sbjct: 121 GMGCLEFDEERAQQEDALAQQAFEEARRRTREFEDRDRSHRE 162
>UniRef50_Q4H3S2 Cluster: Core-binding factor, b subunit; n=1; Ciona
intestinalis|Rep: Core-binding factor, b subunit - Ciona
intestinalis (Transparent sea squirt)
Length = 181
Score = 154 bits (374), Expect = 2e-36
Identities = 74/168 (44%), Positives = 108/168 (64%), Gaps = 8/168 (4%)
Frame = +3
Query: 213 IFKMPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAF 392
+ KMPRVV DQ+A ++S++LF+RLSR++E++YTGYRDR EERQ+RF + CR G EIAF
Sbjct: 2 LLKMPRVVSDQRATYDSNELFRRLSRDTEIKYTGYRDRGTEERQLRFQNSCRAGRAEIAF 61
Query: 393 TGTGTNLQLVF-DHSPYNNRG-------CDFQKENGKAHIVSRFIMNGVCVRWRGWIDLE 548
G+GTN L F S +G +F +E GK H+ + FI+NGVCV W+GW+DL
Sbjct: 62 VGSGTNFTLQFYPWSVEGGQGITPPKDYVNFDREPGKVHLKAPFILNGVCVCWKGWMDLH 121
Query: 549 RLDGAGCLELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGG 692
RL+G G + DEERA +E ++++ + + + + + GG
Sbjct: 122 RLEGMGSIVYDEERAQLEATRQGGSMQQHMHKTSNPKTQNHKHPATGG 169
>UniRef50_UPI0000E24525 Cluster: PREDICTED: hypothetical protein
LOC468115, partial; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein LOC468115, partial - Pan
troglodytes
Length = 197
Score = 90.2 bits (214), Expect = 4e-17
Identities = 36/56 (64%), Positives = 49/56 (87%)
Frame = +3
Query: 219 KMPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEI 386
KMPRVVPDQ++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EI
Sbjct: 71 KMPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEI 126
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +3
Query: 222 MPRVVPDQKAKFESDDLFKRLSRESEVRYTGYR 320
MPRVVPDQ++KFE+++ F++LSRE EVR G R
Sbjct: 1 MPRVVPDQRSKFENEEFFRKLSRECEVRQAGGR 33
>UniRef50_Q4RCC9 Cluster: Chromosome undetermined SCAF19216, whole
genome shotgun sequence; n=6; Euteleostomi|Rep:
Chromosome undetermined SCAF19216, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 76
Score = 83.0 bits (196), Expect = 6e-15
Identities = 37/69 (53%), Positives = 48/69 (69%)
Frame = +3
Query: 477 KAHIVSRFIMNGVCVRWRGWIDLERLDGAGCLELDEERAAIEDAALRDQIERYNQRLRDF 656
+ ++ + I+NGVCV W+GWIDL RLDG G LE DEERA EDA + E +R RDF
Sbjct: 1 QVYLKAPMILNGVCVIWKGWIDLHRLDGMGYLEYDEERAQHEDALAQAAFEEARRRNRDF 60
Query: 657 EDKQRAYRE 683
ED+ R++RE
Sbjct: 61 EDRDRSHRE 69
>UniRef50_UPI000155C339 Cluster: PREDICTED: similar to core-binding
factor, beta subunit, partial; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to core-binding factor,
beta subunit, partial - Ornithorhynchus anatinus
Length = 117
Score = 66.1 bits (154), Expect = 8e-10
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +3
Query: 300 VRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGTGTNLQLVF 425
++YTG+RDRP EERQ RF + CR+G +EIAF TGTNL L F
Sbjct: 1 IKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLSLQF 42
>UniRef50_A4KUC1 Cluster: Tlm Orf16; n=9; Bacteria|Rep: Tlm Orf16 -
Streptoalloteichus hindustanus
Length = 189
Score = 37.9 bits (84), Expect = 0.24
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 2/115 (1%)
Frame = +3
Query: 237 PDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGT--GTN 410
P++ + L +RLS + R PE + EG+ + FT T GT
Sbjct: 75 PEEVPADPTPSLVERLSAAEQPIEASLR---PERTASALRAAIDEGYVIVRFTETRGGTE 131
Query: 411 LQLVFDHSPYNNRGCDFQKENGKAHIVSRFIMNGVCVRWRGWIDLERLDGAGCLE 575
L + D + G DF +G+ +V ++ VR IDL L G G LE
Sbjct: 132 LGIQLDQGATDLAGADFAAGSGEVTLVGTLTLDFEPVRCVARIDLATLAGQGRLE 186
>UniRef50_Q21660 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 382
Score = 34.3 bits (75), Expect = 2.9
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 474 GKAHIVSRFIMNGVCVRWRGWIDLERLDGAGCLELDEERAA 596
GK H+V++FI G +RW W+ R G G DEE+ A
Sbjct: 286 GKIHVVTKFIKAGRKLRW--WVRGNRNFGLGVFHSDEEQVA 324
>UniRef50_Q4P6A9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1207
Score = 34.3 bits (75), Expect = 2.9
Identities = 19/79 (24%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = -1
Query: 536 PTSPSYTNTVHDESGYDVSFSIFLLKVAATVVVG*V-IEDKLKVCAGTGKRYLGVSLAAT 360
P+ +T+ ++ V+ IF + +A +VV + +DK + A + + S++A+
Sbjct: 346 PSKVPFTSPLYGVIAISVAVGIFFMTIAHGLVVRSIKAKDKKRAAAIAAQEKVRGSISAS 405
Query: 359 AHESHLAFFGRPVSVSSVS 303
+ E+H+ FG P ++S++
Sbjct: 406 SSETHIDGFGLPPKMASLA 424
>UniRef50_Q034X9 Cluster: Predicted transcriptional regulator; n=1;
Lactobacillus casei ATCC 334|Rep: Predicted
transcriptional regulator - Lactobacillus casei (strain
ATCC 334)
Length = 343
Score = 33.5 bits (73), Expect = 5.1
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 240 DQKAKFESDD-LFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGTGTNLQ 416
D++A + D+ F R + T +R +P + RF G + HT + G NL+
Sbjct: 190 DEQADDDPDEGKFVRFRLDYMRNITYHRQQPTHDHDERFRGGRLQNHTWYPYLGKPINLE 249
Query: 417 LVFDHSP 437
+++ + P
Sbjct: 250 ILYSYDP 256
>UniRef50_Q9AYC9 Cluster: Putative uncharacterized protein
OSJNBa0094H10.6; n=2; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBa0094H10.6 - Oryza sativa
(Rice)
Length = 367
Score = 33.5 bits (73), Expect = 5.1
Identities = 22/78 (28%), Positives = 32/78 (41%)
Frame = +1
Query: 271 SSKDLAEKVRSDTLDTETGLPKNARCDS*AVAARDTPR*RLPVPAQTFSLSSITHPTTTV 450
SS ++ R ++ + K RC + + R R P T SL S T P+T
Sbjct: 95 SSPSVSPPFRGESTGDASSPAKQWRCRHCSTSGRHCRVSRAPADVATTSLGSATPPSTPA 154
Query: 451 AATFKRKMEKLTSYPDSS 504
A F+R + P SS
Sbjct: 155 APRFRRNAVAAPASPSSS 172
>UniRef50_Q4DHE6 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 703
Score = 33.5 bits (73), Expect = 5.1
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3
Query: 480 AHIVSRFIMNGVCVRWRGWIDLERLDGAGCLELD--EERAAIEDAALRDQIERYNQRLRD 653
+ +V F + GVC WID D LE+D R+ E AA ++ Y + D
Sbjct: 83 SELVCAFFLRGVCHVKLSWIDKAIADFTAALEIDPSHSRSTYERAACHNRKGNYTAAILD 142
Query: 654 FE 659
+E
Sbjct: 143 YE 144
>UniRef50_A6S9B3 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 835
Score = 33.5 bits (73), Expect = 5.1
Identities = 25/103 (24%), Positives = 46/103 (44%)
Frame = +3
Query: 147 DPSPLAGMLPFDSIYEQPKPRFIFKMPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDR 326
D P + ++ I ++ P + + +PD A + +DLF +++ + G++D
Sbjct: 538 DSPPPSYLIKSPGIIDRTLPYPNRREDKSLPDVAA-VQPEDLF-----DADDIFFGFQDM 591
Query: 327 PPEERQMRFMSGCREGHTEIAFTGTGTNLQLVFDHSPYNNRGC 455
P ER+++ + T G+G L FDH PY C
Sbjct: 592 TPHEREVQDRLDAEKEATRANSYGSGFRAPLHFDHCPYTAPIC 634
>UniRef50_A0D964 Cluster: Chromosome undetermined scaffold_41, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_41,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 460
Score = 33.1 bits (72), Expect = 6.7
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 576 LDEERAAIEDAALRDQIERYNQRLRDFEDKQR 671
L++E A+ + +R Q E YNQRLR++ED+ +
Sbjct: 141 LEQENVAMRNEFIRGQ-ESYNQRLREYEDRNK 171
>UniRef50_Q8G450 Cluster: Possible extracellular exo-xylanase; n=1;
Bifidobacterium longum|Rep: Possible extracellular
exo-xylanase - Bifidobacterium longum
Length = 958
Score = 32.7 bits (71), Expect = 8.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 356 ERLPRGTHRDSVYRYRHKPSACLRSLTLQQPWLRLSKG 469
E P G++ D V+ + H P SLT ++ WLRL+ G
Sbjct: 572 EYQPNGSNLDLVWEWGHNPDNRYWSLTDREGWLRLTNG 609
>UniRef50_Q2RKM1 Cluster: ABC transporter substrate-binding protein
precursor; n=3; Bacteria|Rep: ABC transporter
substrate-binding protein precursor - Moorella
thermoacetica (strain ATCC 39073)
Length = 358
Score = 32.7 bits (71), Expect = 8.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 522 RWRGWIDLERLDGAGCLELDEERAAIEDAALRD 620
RW W+ ++ G L +D++RAA+ED A +D
Sbjct: 72 RWGKWLGVDITWYDGALSVDKQRAAVEDMATKD 104
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,280,369
Number of Sequences: 1657284
Number of extensions: 15344416
Number of successful extensions: 46787
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 44894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46773
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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