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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0953
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q13951 Cluster: Core-binding factor subunit beta; n=42;...   187   3e-46
UniRef50_Q4H3S2 Cluster: Core-binding factor, b subunit; n=1; Ci...   154   2e-36
UniRef50_UPI0000E24525 Cluster: PREDICTED: hypothetical protein ...    90   4e-17
UniRef50_Q4RCC9 Cluster: Chromosome undetermined SCAF19216, whol...    83   6e-15
UniRef50_UPI000155C339 Cluster: PREDICTED: similar to core-bindi...    66   8e-10
UniRef50_A4KUC1 Cluster: Tlm Orf16; n=9; Bacteria|Rep: Tlm Orf16...    38   0.24 
UniRef50_Q21660 Cluster: Putative uncharacterized protein; n=2; ...    34   2.9  
UniRef50_Q4P6A9 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_Q034X9 Cluster: Predicted transcriptional regulator; n=...    33   5.1  
UniRef50_Q9AYC9 Cluster: Putative uncharacterized protein OSJNBa...    33   5.1  
UniRef50_Q4DHE6 Cluster: Putative uncharacterized protein; n=2; ...    33   5.1  
UniRef50_A6S9B3 Cluster: Putative uncharacterized protein; n=1; ...    33   5.1  
UniRef50_A0D964 Cluster: Chromosome undetermined scaffold_41, wh...    33   6.7  
UniRef50_Q8G450 Cluster: Possible extracellular exo-xylanase; n=...    33   8.9  
UniRef50_Q2RKM1 Cluster: ABC transporter substrate-binding prote...    33   8.9  

>UniRef50_Q13951 Cluster: Core-binding factor subunit beta; n=42;
           Eumetazoa|Rep: Core-binding factor subunit beta - Homo
           sapiens (Human)
          Length = 182

 Score =  187 bits (455), Expect = 3e-46
 Identities = 85/162 (52%), Positives = 115/162 (70%), Gaps = 8/162 (4%)
 Frame = +3

Query: 222 MPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGT 401
           MPRVVPDQ++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EIAF  T
Sbjct: 1   MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVAT 60

Query: 402 GTNLQLVFDHSPY--------NNRGCDFQKENGKAHIVSRFIMNGVCVRWRGWIDLERLD 557
           GTNL L F  + +        +    D ++E GK ++ +  I+NGVCV W+GWIDL+RLD
Sbjct: 61  GTNLSLQFFPASWQGEQRQTPSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLQRLD 120

Query: 558 GAGCLELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYRE 683
           G GCLE DEERA  EDA  +   E   +R R+FED+ R++RE
Sbjct: 121 GMGCLEFDEERAQQEDALAQQAFEEARRRTREFEDRDRSHRE 162


>UniRef50_Q4H3S2 Cluster: Core-binding factor, b subunit; n=1; Ciona
           intestinalis|Rep: Core-binding factor, b subunit - Ciona
           intestinalis (Transparent sea squirt)
          Length = 181

 Score =  154 bits (374), Expect = 2e-36
 Identities = 74/168 (44%), Positives = 108/168 (64%), Gaps = 8/168 (4%)
 Frame = +3

Query: 213 IFKMPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAF 392
           + KMPRVV DQ+A ++S++LF+RLSR++E++YTGYRDR  EERQ+RF + CR G  EIAF
Sbjct: 2   LLKMPRVVSDQRATYDSNELFRRLSRDTEIKYTGYRDRGTEERQLRFQNSCRAGRAEIAF 61

Query: 393 TGTGTNLQLVF-DHSPYNNRG-------CDFQKENGKAHIVSRFIMNGVCVRWRGWIDLE 548
            G+GTN  L F   S    +G        +F +E GK H+ + FI+NGVCV W+GW+DL 
Sbjct: 62  VGSGTNFTLQFYPWSVEGGQGITPPKDYVNFDREPGKVHLKAPFILNGVCVCWKGWMDLH 121

Query: 549 RLDGAGCLELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGG 692
           RL+G G +  DEERA +E       ++++  +  + + +   +   GG
Sbjct: 122 RLEGMGSIVYDEERAQLEATRQGGSMQQHMHKTSNPKTQNHKHPATGG 169


>UniRef50_UPI0000E24525 Cluster: PREDICTED: hypothetical protein
           LOC468115, partial; n=1; Pan troglodytes|Rep: PREDICTED:
           hypothetical protein LOC468115, partial - Pan
           troglodytes
          Length = 197

 Score = 90.2 bits (214), Expect = 4e-17
 Identities = 36/56 (64%), Positives = 49/56 (87%)
 Frame = +3

Query: 219 KMPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEI 386
           KMPRVVPDQ++KFE+++ F++LSRE E++YTG+RDRP EERQ RF + CR+G +EI
Sbjct: 71  KMPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEI 126



 Score = 50.4 bits (115), Expect = 4e-05
 Identities = 21/33 (63%), Positives = 28/33 (84%)
 Frame = +3

Query: 222 MPRVVPDQKAKFESDDLFKRLSRESEVRYTGYR 320
           MPRVVPDQ++KFE+++ F++LSRE EVR  G R
Sbjct: 1   MPRVVPDQRSKFENEEFFRKLSRECEVRQAGGR 33


>UniRef50_Q4RCC9 Cluster: Chromosome undetermined SCAF19216, whole
           genome shotgun sequence; n=6; Euteleostomi|Rep:
           Chromosome undetermined SCAF19216, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 76

 Score = 83.0 bits (196), Expect = 6e-15
 Identities = 37/69 (53%), Positives = 48/69 (69%)
 Frame = +3

Query: 477 KAHIVSRFIMNGVCVRWRGWIDLERLDGAGCLELDEERAAIEDAALRDQIERYNQRLRDF 656
           + ++ +  I+NGVCV W+GWIDL RLDG G LE DEERA  EDA  +   E   +R RDF
Sbjct: 1   QVYLKAPMILNGVCVIWKGWIDLHRLDGMGYLEYDEERAQHEDALAQAAFEEARRRNRDF 60

Query: 657 EDKQRAYRE 683
           ED+ R++RE
Sbjct: 61  EDRDRSHRE 69


>UniRef50_UPI000155C339 Cluster: PREDICTED: similar to core-binding
           factor, beta subunit, partial; n=1; Ornithorhynchus
           anatinus|Rep: PREDICTED: similar to core-binding factor,
           beta subunit, partial - Ornithorhynchus anatinus
          Length = 117

 Score = 66.1 bits (154), Expect = 8e-10
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = +3

Query: 300 VRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGTGTNLQLVF 425
           ++YTG+RDRP EERQ RF + CR+G +EIAF  TGTNL L F
Sbjct: 1   IKYTGFRDRPHEERQARFQNACRDGRSEIAFVATGTNLSLQF 42


>UniRef50_A4KUC1 Cluster: Tlm Orf16; n=9; Bacteria|Rep: Tlm Orf16 -
           Streptoalloteichus hindustanus
          Length = 189

 Score = 37.9 bits (84), Expect = 0.24
 Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 2/115 (1%)
 Frame = +3

Query: 237 PDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGT--GTN 410
           P++     +  L +RLS   +      R   PE       +   EG+  + FT T  GT 
Sbjct: 75  PEEVPADPTPSLVERLSAAEQPIEASLR---PERTASALRAAIDEGYVIVRFTETRGGTE 131

Query: 411 LQLVFDHSPYNNRGCDFQKENGKAHIVSRFIMNGVCVRWRGWIDLERLDGAGCLE 575
           L +  D    +  G DF   +G+  +V    ++   VR    IDL  L G G LE
Sbjct: 132 LGIQLDQGATDLAGADFAAGSGEVTLVGTLTLDFEPVRCVARIDLATLAGQGRLE 186


>UniRef50_Q21660 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 382

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 474 GKAHIVSRFIMNGVCVRWRGWIDLERLDGAGCLELDEERAA 596
           GK H+V++FI  G  +RW  W+   R  G G    DEE+ A
Sbjct: 286 GKIHVVTKFIKAGRKLRW--WVRGNRNFGLGVFHSDEEQVA 324


>UniRef50_Q4P6A9 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 1207

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 19/79 (24%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = -1

Query: 536 PTSPSYTNTVHDESGYDVSFSIFLLKVAATVVVG*V-IEDKLKVCAGTGKRYLGVSLAAT 360
           P+   +T+ ++      V+  IF + +A  +VV  +  +DK +  A   +  +  S++A+
Sbjct: 346 PSKVPFTSPLYGVIAISVAVGIFFMTIAHGLVVRSIKAKDKKRAAAIAAQEKVRGSISAS 405

Query: 359 AHESHLAFFGRPVSVSSVS 303
           + E+H+  FG P  ++S++
Sbjct: 406 SSETHIDGFGLPPKMASLA 424


>UniRef50_Q034X9 Cluster: Predicted transcriptional regulator; n=1;
           Lactobacillus casei ATCC 334|Rep: Predicted
           transcriptional regulator - Lactobacillus casei (strain
           ATCC 334)
          Length = 343

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +3

Query: 240 DQKAKFESDD-LFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGTGTNLQ 416
           D++A  + D+  F R   +     T +R +P  +   RF  G  + HT   + G   NL+
Sbjct: 190 DEQADDDPDEGKFVRFRLDYMRNITYHRQQPTHDHDERFRGGRLQNHTWYPYLGKPINLE 249

Query: 417 LVFDHSP 437
           +++ + P
Sbjct: 250 ILYSYDP 256


>UniRef50_Q9AYC9 Cluster: Putative uncharacterized protein
           OSJNBa0094H10.6; n=2; Oryza sativa|Rep: Putative
           uncharacterized protein OSJNBa0094H10.6 - Oryza sativa
           (Rice)
          Length = 367

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 22/78 (28%), Positives = 32/78 (41%)
 Frame = +1

Query: 271 SSKDLAEKVRSDTLDTETGLPKNARCDS*AVAARDTPR*RLPVPAQTFSLSSITHPTTTV 450
           SS  ++   R ++    +   K  RC   + + R     R P    T SL S T P+T  
Sbjct: 95  SSPSVSPPFRGESTGDASSPAKQWRCRHCSTSGRHCRVSRAPADVATTSLGSATPPSTPA 154

Query: 451 AATFKRKMEKLTSYPDSS 504
           A  F+R      + P SS
Sbjct: 155 APRFRRNAVAAPASPSSS 172


>UniRef50_Q4DHE6 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 703

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +3

Query: 480 AHIVSRFIMNGVCVRWRGWIDLERLDGAGCLELD--EERAAIEDAALRDQIERYNQRLRD 653
           + +V  F + GVC     WID    D    LE+D    R+  E AA  ++   Y   + D
Sbjct: 83  SELVCAFFLRGVCHVKLSWIDKAIADFTAALEIDPSHSRSTYERAACHNRKGNYTAAILD 142

Query: 654 FE 659
           +E
Sbjct: 143 YE 144


>UniRef50_A6S9B3 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 835

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 25/103 (24%), Positives = 46/103 (44%)
 Frame = +3

Query: 147 DPSPLAGMLPFDSIYEQPKPRFIFKMPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDR 326
           D  P + ++    I ++  P    +  + +PD  A  + +DLF     +++  + G++D 
Sbjct: 538 DSPPPSYLIKSPGIIDRTLPYPNRREDKSLPDVAA-VQPEDLF-----DADDIFFGFQDM 591

Query: 327 PPEERQMRFMSGCREGHTEIAFTGTGTNLQLVFDHSPYNNRGC 455
            P ER+++      +  T     G+G    L FDH PY    C
Sbjct: 592 TPHEREVQDRLDAEKEATRANSYGSGFRAPLHFDHCPYTAPIC 634


>UniRef50_A0D964 Cluster: Chromosome undetermined scaffold_41, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_41,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 460

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = +3

Query: 576 LDEERAAIEDAALRDQIERYNQRLRDFEDKQR 671
           L++E  A+ +  +R Q E YNQRLR++ED+ +
Sbjct: 141 LEQENVAMRNEFIRGQ-ESYNQRLREYEDRNK 171


>UniRef50_Q8G450 Cluster: Possible extracellular exo-xylanase; n=1;
           Bifidobacterium longum|Rep: Possible extracellular
           exo-xylanase - Bifidobacterium longum
          Length = 958

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 356 ERLPRGTHRDSVYRYRHKPSACLRSLTLQQPWLRLSKG 469
           E  P G++ D V+ + H P     SLT ++ WLRL+ G
Sbjct: 572 EYQPNGSNLDLVWEWGHNPDNRYWSLTDREGWLRLTNG 609


>UniRef50_Q2RKM1 Cluster: ABC transporter substrate-binding protein
           precursor; n=3; Bacteria|Rep: ABC transporter
           substrate-binding protein precursor - Moorella
           thermoacetica (strain ATCC 39073)
          Length = 358

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 522 RWRGWIDLERLDGAGCLELDEERAAIEDAALRD 620
           RW  W+ ++     G L +D++RAA+ED A +D
Sbjct: 72  RWGKWLGVDITWYDGALSVDKQRAAVEDMATKD 104


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,280,369
Number of Sequences: 1657284
Number of extensions: 15344416
Number of successful extensions: 46787
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 44894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46773
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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