Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0952
(697 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029687-1|ABL75744.1| 486|Drosophila melanogaster IP17403p pro... 136 3e-32
AY052085-1|AAK93509.1| 403|Drosophila melanogaster SD03655p pro... 136 3e-32
AE014296-291|AAN11491.1| 403|Drosophila melanogaster CG12004-PB... 136 3e-32
AE014296-290|AAF47516.2| 403|Drosophila melanogaster CG12004-PA... 136 3e-32
AY051817-1|AAK93241.1| 491|Drosophila melanogaster LD32366p pro... 35 0.12
AE014134-1743|AAF52840.2| 491|Drosophila melanogaster CG5850-PA... 35 0.12
AE014134-1742|ABI31304.1| 569|Drosophila melanogaster CG5850-PB... 35 0.12
BT029568-1|ABL75627.1| 171|Drosophila melanogaster IP16874p pro... 30 3.5
>BT029687-1|ABL75744.1| 486|Drosophila melanogaster IP17403p
protein.
Length = 486
Score = 136 bits (329), Expect = 3e-32
Identities = 68/83 (81%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
Frame = +3
Query: 12 GTVSAGYQNFLICIEMCAAAVALRYAFPAAVYVHSH-RDPH-RSLTMQSISSSLKETMNP 185
GTVSAGYQNF ICIEM AA+ALRYAFP VY S D H RS+TMQSISSSLKETMNP
Sbjct: 310 GTVSAGYQNFFICIEMLFAAIALRYAFPYQVYARSCISDGHGRSVTMQSISSSLKETMNP 369
Query: 186 KDIMTDAFHNFHPQYQQYTQYSS 254
KDIMTDA HNFHPQYQQYTQYSS
Sbjct: 370 KDIMTDAIHNFHPQYQQYTQYSS 392
Score = 39.1 bits (87), Expect = 0.006
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +1
Query: 316 RPPPQRVATICHATNYHEKTTLLSSDDEFQ 405
+P QRVATI + NY+EKT LLSSDDE+Q
Sbjct: 459 QPGGQRVATI--SQNYNEKTMLLSSDDEYQ 486
>AY052085-1|AAK93509.1| 403|Drosophila melanogaster SD03655p
protein.
Length = 403
Score = 136 bits (329), Expect = 3e-32
Identities = 68/83 (81%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
Frame = +3
Query: 12 GTVSAGYQNFLICIEMCAAAVALRYAFPAAVYVHSH-RDPH-RSLTMQSISSSLKETMNP 185
GTVSAGYQNF ICIEM AA+ALRYAFP VY S D H RS+TMQSISSSLKETMNP
Sbjct: 310 GTVSAGYQNFFICIEMLFAAIALRYAFPYQVYARSCISDGHGRSVTMQSISSSLKETMNP 369
Query: 186 KDIMTDAFHNFHPQYQQYTQYSS 254
KDIMTDA HNFHPQYQQYTQYSS
Sbjct: 370 KDIMTDAIHNFHPQYQQYTQYSS 392
>AE014296-291|AAN11491.1| 403|Drosophila melanogaster CG12004-PB,
isoform B protein.
Length = 403
Score = 136 bits (329), Expect = 3e-32
Identities = 68/83 (81%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
Frame = +3
Query: 12 GTVSAGYQNFLICIEMCAAAVALRYAFPAAVYVHSH-RDPH-RSLTMQSISSSLKETMNP 185
GTVSAGYQNF ICIEM AA+ALRYAFP VY S D H RS+TMQSISSSLKETMNP
Sbjct: 310 GTVSAGYQNFFICIEMLFAAIALRYAFPYQVYARSCISDGHGRSVTMQSISSSLKETMNP 369
Query: 186 KDIMTDAFHNFHPQYQQYTQYSS 254
KDIMTDA HNFHPQYQQYTQYSS
Sbjct: 370 KDIMTDAIHNFHPQYQQYTQYSS 392
>AE014296-290|AAF47516.2| 403|Drosophila melanogaster CG12004-PA,
isoform A protein.
Length = 403
Score = 136 bits (329), Expect = 3e-32
Identities = 68/83 (81%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
Frame = +3
Query: 12 GTVSAGYQNFLICIEMCAAAVALRYAFPAAVYVHSH-RDPH-RSLTMQSISSSLKETMNP 185
GTVSAGYQNF ICIEM AA+ALRYAFP VY S D H RS+TMQSISSSLKETMNP
Sbjct: 310 GTVSAGYQNFFICIEMLFAAIALRYAFPYQVYARSCISDGHGRSVTMQSISSSLKETMNP 369
Query: 186 KDIMTDAFHNFHPQYQQYTQYSS 254
KDIMTDA HNFHPQYQQYTQYSS
Sbjct: 370 KDIMTDAIHNFHPQYQQYTQYSS 392
>AY051817-1|AAK93241.1| 491|Drosophila melanogaster LD32366p
protein.
Length = 491
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +3
Query: 33 QNFLICIEMCAAAVALRYAFP 95
QNFLICIEM AAVA Y+FP
Sbjct: 294 QNFLICIEMFIAAVAHIYSFP 314
>AE014134-1743|AAF52840.2| 491|Drosophila melanogaster CG5850-PA,
isoform A protein.
Length = 491
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +3
Query: 33 QNFLICIEMCAAAVALRYAFP 95
QNFLICIEM AAVA Y+FP
Sbjct: 294 QNFLICIEMFIAAVAHIYSFP 314
>AE014134-1742|ABI31304.1| 569|Drosophila melanogaster CG5850-PB,
isoform B protein.
Length = 569
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +3
Query: 33 QNFLICIEMCAAAVALRYAFP 95
QNFLICIEM AAVA Y+FP
Sbjct: 294 QNFLICIEMFIAAVAHIYSFP 314
>BT029568-1|ABL75627.1| 171|Drosophila melanogaster IP16874p
protein.
Length = 171
Score = 29.9 bits (64), Expect = 3.5
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -2
Query: 366 VVIGGVADGSDALGRRARSQSRSF-LPHAYRIPCDRALRSCTGCTAGTADGSCG-RRPSL 193
+V+ V G D G RA + LP A I RAL C GC G G G RP L
Sbjct: 94 IVLESVVRGIDQCGIRATMMALVLPLPPAVLIVAARALGRCHGCGGGHRGGPEGFARPLL 153
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,198,532
Number of Sequences: 53049
Number of extensions: 509177
Number of successful extensions: 1856
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1841
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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