BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0951 (553 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_0469 - 3552409-3553368 31 0.81 02_01_0251 - 1652356-1652522,1652564-1652608,1652658-1652733,165... 30 1.4 06_01_0922 - 7113781-7113942,7114093-7114235,7115305-7115506,711... 29 1.9 01_06_1614 - 38648495-38649706 29 1.9 01_05_0409 - 21896478-21897005,21897098-21897292,21897405-218975... 29 1.9 02_01_0468 + 3357043-3357226,3357695-3358155 29 2.5 04_01_0244 - 3194141-3195091,3195301-3195312 29 3.3 10_08_0974 + 21969713-21971914 28 4.3 07_03_0271 - 16138605-16139072,16139174-16139327,16139465-16139934 27 7.5 03_05_0085 - 20638769-20639150,20640054-20640286 27 7.5 02_01_0766 + 5706714-5707013,5707100-5707217,5708329-5708753 27 7.5 10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595 27 10.0 10_07_0029 + 12031711-12032464,12044289-12044386 27 10.0 08_02_0859 + 21960172-21961121,21961244-21961304,21961406-21962527 27 10.0 08_01_0220 - 1751367-1752854 27 10.0 07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 27 10.0 03_01_0077 - 630807-631094 27 10.0 >07_01_0469 - 3552409-3553368 Length = 319 Score = 30.7 bits (66), Expect = 0.81 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +1 Query: 13 APVHVTLDPRVQPVPGGPIFVPQPVGSPAIKLSASAYWILRLP 141 AP + P VP P P PV +PA LS + +R+P Sbjct: 213 APAAPPVPPAAPAVPAAPALAPVPVSAPASALSFAPASAVRVP 255 Score = 27.5 bits (58), Expect = 7.5 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = +1 Query: 13 APVHVTLDPRVQPVPGGPIFVPQPVGSPAI 102 APV + L PR P P P P +PA+ Sbjct: 197 APVRIQLAPRNPPPSAAPAAPPVPPAAPAV 226 >02_01_0251 - 1652356-1652522,1652564-1652608,1652658-1652733, 1652976-1653041,1653120-1653238,1653334-1653508, 1653604-1653881,1654253-1654436,1654455-1654550, 1654872-1655012,1655091-1655123 Length = 459 Score = 29.9 bits (64), Expect = 1.4 Identities = 23/63 (36%), Positives = 27/63 (42%) Frame = +1 Query: 1 GHAQAPVHVTLDPRVQPVPGGPIFVPQPVGSPAIKLSASAYWILRLPFVYCDERGALPRP 180 G A AP P PVP P V +PVG P K AS + P V+ + A RP Sbjct: 210 GMAMAPEEPVQSP---PVP--PPHVEEPVGEPVKKTYASILRTAKAPLVFPVAQPAPTRP 264 Query: 181 RTA 189 A Sbjct: 265 HQA 267 >06_01_0922 - 7113781-7113942,7114093-7114235,7115305-7115506, 7115590-7115685,7117053-7117139,7117237-7117638 Length = 363 Score = 29.5 bits (63), Expect = 1.9 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -3 Query: 116 DADSLMAGEPTGCGTKIGPPGTGCTLGSSVTCTGAWA 6 D D+L+ GE G + G P G + SS++C A A Sbjct: 27 DVDALLCGEDAGELEREGEPAQGSSPSSSLSCAAAAA 63 >01_06_1614 - 38648495-38649706 Length = 403 Score = 29.5 bits (63), Expect = 1.9 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +1 Query: 133 RLPFVYCDERGALPRPRTAPSSPLSQGVI 219 RL + + RGALP P PSS S+G I Sbjct: 53 RLEDILAETRGALPLPSPTPSSSGSEGTI 81 >01_05_0409 - 21896478-21897005,21897098-21897292,21897405-21897542, 21897641-21897728,21897837-21897925,21898032-21898553 Length = 519 Score = 29.5 bits (63), Expect = 1.9 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +1 Query: 22 HVTLDPRVQPVP-GGPIFVPQPVGSPAIKLSASAYWI 129 HV L PRV P P + +P P SP I+LS +++ Sbjct: 441 HVNLSPRVVPSPTTNRLPIPSPRPSPKIRLSPRLHYM 477 >02_01_0468 + 3357043-3357226,3357695-3358155 Length = 214 Score = 29.1 bits (62), Expect = 2.5 Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 1/86 (1%) Frame = -3 Query: 275 LTLICSSNVQSASPNSGASITPCDSGEEGAVRG-RGSAPRSSQYTNGRRRIQ*ADADSLM 99 + ++ ++ SASP S +S SG G G AP + T A+ + Sbjct: 124 IVMVANATGSSASPPSSSSSPSSPSGGGGGGGAPAGQAPPGAPATPAGTNSSPANGGAAG 183 Query: 98 AGEPTGCGTKIGPPGTGCTLGSSVTC 21 G +G G + G +L +++ C Sbjct: 184 GGAKSGAGLTVAASGLAGSLIAAIAC 209 >04_01_0244 - 3194141-3195091,3195301-3195312 Length = 320 Score = 28.7 bits (61), Expect = 3.3 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +1 Query: 13 APVHVTLDPRVQPVPGGPIFVPQPVGSPAIKLSASAY 123 APV + L PR P P P P P PA A + Sbjct: 201 APVRIQLAPRNPPPPAAPAAPPVPPAVPAAPAPAPVH 237 >10_08_0974 + 21969713-21971914 Length = 733 Score = 28.3 bits (60), Expect = 4.3 Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +1 Query: 40 RVQPVPGGPIFVPQPVGSPAIKLSASAYWILRLPFVYCDERGA-LPRPRTAPSSPLS 207 R QP P P P SP LS W+L Y DE G+ LPR + P+S LS Sbjct: 81 RPQPTAAAP---PPPSLSPF--LSRLELWVLAYQKAYADETGSYLPR-SSIPASTLS 131 >07_03_0271 - 16138605-16139072,16139174-16139327,16139465-16139934 Length = 363 Score = 27.5 bits (58), Expect = 7.5 Identities = 20/61 (32%), Positives = 27/61 (44%) Frame = -3 Query: 212 PCDSGEEGAVRGRGSAPRSSQYTNGRRRIQ*ADADSLMAGEPTGCGTKIGPPGTGCTLGS 33 P D +GA G G+ R ++ A ++ +AG G GT G G G LGS Sbjct: 26 PFDPAADGAQGGLGALRRGHRFATSYSSFGTAASEDDLAG--AGAGTD-GGVGAGIPLGS 82 Query: 32 S 30 S Sbjct: 83 S 83 >03_05_0085 - 20638769-20639150,20640054-20640286 Length = 204 Score = 27.5 bits (58), Expect = 7.5 Identities = 15/59 (25%), Positives = 21/59 (35%) Frame = -3 Query: 263 CSSNVQSASPNSGASITPCDSGEEGAVRGRGSAPRSSQYTNGRRRIQ*ADADSLMAGEP 87 C + G S P + G E V +AP + + IQ DAD +P Sbjct: 88 CEIRTRKGKDVEGGSSVPIEVGSEEEVNAEDAAPVAKEDQGHSEAIQDEDADHHQVNDP 146 >02_01_0766 + 5706714-5707013,5707100-5707217,5708329-5708753 Length = 280 Score = 27.5 bits (58), Expect = 7.5 Identities = 15/54 (27%), Positives = 22/54 (40%) Frame = -3 Query: 299 FSRILFCKLTLICSSNVQSASPNSGASITPCDSGEEGAVRGRGSAPRSSQYTNG 138 F+ L KL C + P + S+ D ++ +GS P SS NG Sbjct: 170 FTTDLLYKLVKECEEMLDQLMPTNEHSVASEDGKDDSEGEEKGSKPSSSSSANG 223 >10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595 Length = 514 Score = 27.1 bits (57), Expect = 10.0 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +1 Query: 25 VTLDPRVQPVPGGPIFVPQPVGSPAIKLSASA 120 V L PR +PV G VP P P +K+ A A Sbjct: 420 VQLQPRNEPVSIGKGVVPLPAIRPPVKVEAPA 451 >10_07_0029 + 12031711-12032464,12044289-12044386 Length = 283 Score = 27.1 bits (57), Expect = 10.0 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = +1 Query: 13 APVHVTLDPRVQPVPGGPIFVPQPVGSPAIKLSASA 120 APV + L PR P P P P PA + A A Sbjct: 197 APVRIQLAPRNPPPAAAPAAPPVPPAVPAAQAPAPA 232 >08_02_0859 + 21960172-21961121,21961244-21961304,21961406-21962527 Length = 710 Score = 27.1 bits (57), Expect = 10.0 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -2 Query: 138 EAEDPVGGRRQLDGRRAHGLRDEDRPAGHRLH 43 E ED GG LD R +HG+ D G+R++ Sbjct: 630 EVEDIGGGALFLDHRTSHGVGSPDGGHGNRIY 661 >08_01_0220 - 1751367-1752854 Length = 495 Score = 27.1 bits (57), Expect = 10.0 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +1 Query: 151 CDERGALPRPRTAPSSPLSQGVILAPL 231 C ER + P AP++PL + L PL Sbjct: 197 CQERHVVSTPEKAPAAPLPRSEYLRPL 223 >07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828, 5049380-5049429,5049517-5049586,5049668-5049749, 5049867-5050267,5050414-5050941,5051823-5052044 Length = 558 Score = 27.1 bits (57), Expect = 10.0 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Frame = +1 Query: 22 HVTLDPRVQPVPGGPIFVPQPVGSPAIKL-SASAYWILRLPFVYCDERGALPRPRTAPSS 198 H TL+P P PG P +G P I L S+SA +P LP P P Sbjct: 154 HPTLNPSGAPPPGKPPMYKSSIG-PRIPLPSSSAGASSSMPGTEEAGPSTLPPPPPPPPL 212 Query: 199 PLS 207 P S Sbjct: 213 PAS 215 >03_01_0077 - 630807-631094 Length = 95 Score = 27.1 bits (57), Expect = 10.0 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = -3 Query: 77 GTKIGPPGTGCTLGSSVTCTGAWA 6 G +G G GC G CTGA A Sbjct: 19 GGVVGVAGAGCNAGQLTVCTGAIA 42 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,595,773 Number of Sequences: 37544 Number of extensions: 222792 Number of successful extensions: 868 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 831 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 868 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1245816180 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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