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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0951
         (553 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0469 - 3552409-3553368                                           31   0.81 
02_01_0251 - 1652356-1652522,1652564-1652608,1652658-1652733,165...    30   1.4  
06_01_0922 - 7113781-7113942,7114093-7114235,7115305-7115506,711...    29   1.9  
01_06_1614 - 38648495-38649706                                         29   1.9  
01_05_0409 - 21896478-21897005,21897098-21897292,21897405-218975...    29   1.9  
02_01_0468 + 3357043-3357226,3357695-3358155                           29   2.5  
04_01_0244 - 3194141-3195091,3195301-3195312                           29   3.3  
10_08_0974 + 21969713-21971914                                         28   4.3  
07_03_0271 - 16138605-16139072,16139174-16139327,16139465-16139934     27   7.5  
03_05_0085 - 20638769-20639150,20640054-20640286                       27   7.5  
02_01_0766 + 5706714-5707013,5707100-5707217,5708329-5708753           27   7.5  
10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595     27   10.0 
10_07_0029 + 12031711-12032464,12044289-12044386                       27   10.0 
08_02_0859 + 21960172-21961121,21961244-21961304,21961406-21962527     27   10.0 
08_01_0220 - 1751367-1752854                                           27   10.0 
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504...    27   10.0 
03_01_0077 - 630807-631094                                             27   10.0 

>07_01_0469 - 3552409-3553368
          Length = 319

 Score = 30.7 bits (66), Expect = 0.81
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +1

Query: 13  APVHVTLDPRVQPVPGGPIFVPQPVGSPAIKLSASAYWILRLP 141
           AP    + P    VP  P   P PV +PA  LS +    +R+P
Sbjct: 213 APAAPPVPPAAPAVPAAPALAPVPVSAPASALSFAPASAVRVP 255



 Score = 27.5 bits (58), Expect = 7.5
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 13  APVHVTLDPRVQPVPGGPIFVPQPVGSPAI 102
           APV + L PR  P    P   P P  +PA+
Sbjct: 197 APVRIQLAPRNPPPSAAPAAPPVPPAAPAV 226


>02_01_0251 -
           1652356-1652522,1652564-1652608,1652658-1652733,
           1652976-1653041,1653120-1653238,1653334-1653508,
           1653604-1653881,1654253-1654436,1654455-1654550,
           1654872-1655012,1655091-1655123
          Length = 459

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 23/63 (36%), Positives = 27/63 (42%)
 Frame = +1

Query: 1   GHAQAPVHVTLDPRVQPVPGGPIFVPQPVGSPAIKLSASAYWILRLPFVYCDERGALPRP 180
           G A AP      P   PVP  P  V +PVG P  K  AS     + P V+   + A  RP
Sbjct: 210 GMAMAPEEPVQSP---PVP--PPHVEEPVGEPVKKTYASILRTAKAPLVFPVAQPAPTRP 264

Query: 181 RTA 189
             A
Sbjct: 265 HQA 267


>06_01_0922 -
           7113781-7113942,7114093-7114235,7115305-7115506,
           7115590-7115685,7117053-7117139,7117237-7117638
          Length = 363

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 116 DADSLMAGEPTGCGTKIGPPGTGCTLGSSVTCTGAWA 6
           D D+L+ GE  G   + G P  G +  SS++C  A A
Sbjct: 27  DVDALLCGEDAGELEREGEPAQGSSPSSSLSCAAAAA 63


>01_06_1614 - 38648495-38649706
          Length = 403

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 133 RLPFVYCDERGALPRPRTAPSSPLSQGVI 219
           RL  +  + RGALP P   PSS  S+G I
Sbjct: 53  RLEDILAETRGALPLPSPTPSSSGSEGTI 81


>01_05_0409 -
           21896478-21897005,21897098-21897292,21897405-21897542,
           21897641-21897728,21897837-21897925,21898032-21898553
          Length = 519

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +1

Query: 22  HVTLDPRVQPVP-GGPIFVPQPVGSPAIKLSASAYWI 129
           HV L PRV P P    + +P P  SP I+LS   +++
Sbjct: 441 HVNLSPRVVPSPTTNRLPIPSPRPSPKIRLSPRLHYM 477


>02_01_0468 + 3357043-3357226,3357695-3358155
          Length = 214

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
 Frame = -3

Query: 275 LTLICSSNVQSASPNSGASITPCDSGEEGAVRG-RGSAPRSSQYTNGRRRIQ*ADADSLM 99
           + ++ ++   SASP S +S     SG  G      G AP  +  T        A+  +  
Sbjct: 124 IVMVANATGSSASPPSSSSSPSSPSGGGGGGGAPAGQAPPGAPATPAGTNSSPANGGAAG 183

Query: 98  AGEPTGCGTKIGPPGTGCTLGSSVTC 21
            G  +G G  +   G   +L +++ C
Sbjct: 184 GGAKSGAGLTVAASGLAGSLIAAIAC 209


>04_01_0244 - 3194141-3195091,3195301-3195312
          Length = 320

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = +1

Query: 13  APVHVTLDPRVQPVPGGPIFVPQPVGSPAIKLSASAY 123
           APV + L PR  P P  P   P P   PA    A  +
Sbjct: 201 APVRIQLAPRNPPPPAAPAAPPVPPAVPAAPAPAPVH 237


>10_08_0974 + 21969713-21971914
          Length = 733

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 40  RVQPVPGGPIFVPQPVGSPAIKLSASAYWILRLPFVYCDERGA-LPRPRTAPSSPLS 207
           R QP    P   P P  SP   LS    W+L     Y DE G+ LPR  + P+S LS
Sbjct: 81  RPQPTAAAP---PPPSLSPF--LSRLELWVLAYQKAYADETGSYLPR-SSIPASTLS 131


>07_03_0271 - 16138605-16139072,16139174-16139327,16139465-16139934
          Length = 363

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 20/61 (32%), Positives = 27/61 (44%)
 Frame = -3

Query: 212 PCDSGEEGAVRGRGSAPRSSQYTNGRRRIQ*ADADSLMAGEPTGCGTKIGPPGTGCTLGS 33
           P D   +GA  G G+  R  ++         A ++  +AG   G GT  G  G G  LGS
Sbjct: 26  PFDPAADGAQGGLGALRRGHRFATSYSSFGTAASEDDLAG--AGAGTD-GGVGAGIPLGS 82

Query: 32  S 30
           S
Sbjct: 83  S 83


>03_05_0085 - 20638769-20639150,20640054-20640286
          Length = 204

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 15/59 (25%), Positives = 21/59 (35%)
 Frame = -3

Query: 263 CSSNVQSASPNSGASITPCDSGEEGAVRGRGSAPRSSQYTNGRRRIQ*ADADSLMAGEP 87
           C    +      G S  P + G E  V    +AP + +       IQ  DAD     +P
Sbjct: 88  CEIRTRKGKDVEGGSSVPIEVGSEEEVNAEDAAPVAKEDQGHSEAIQDEDADHHQVNDP 146


>02_01_0766 + 5706714-5707013,5707100-5707217,5708329-5708753
          Length = 280

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 15/54 (27%), Positives = 22/54 (40%)
 Frame = -3

Query: 299 FSRILFCKLTLICSSNVQSASPNSGASITPCDSGEEGAVRGRGSAPRSSQYTNG 138
           F+  L  KL   C   +    P +  S+   D  ++     +GS P SS   NG
Sbjct: 170 FTTDLLYKLVKECEEMLDQLMPTNEHSVASEDGKDDSEGEEKGSKPSSSSSANG 223


>10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595
          Length = 514

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +1

Query: 25  VTLDPRVQPVPGGPIFVPQPVGSPAIKLSASA 120
           V L PR +PV  G   VP P   P +K+ A A
Sbjct: 420 VQLQPRNEPVSIGKGVVPLPAIRPPVKVEAPA 451


>10_07_0029 + 12031711-12032464,12044289-12044386
          Length = 283

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +1

Query: 13  APVHVTLDPRVQPVPGGPIFVPQPVGSPAIKLSASA 120
           APV + L PR  P    P   P P   PA +  A A
Sbjct: 197 APVRIQLAPRNPPPAAAPAAPPVPPAVPAAQAPAPA 232


>08_02_0859 + 21960172-21961121,21961244-21961304,21961406-21962527
          Length = 710

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2

Query: 138 EAEDPVGGRRQLDGRRAHGLRDEDRPAGHRLH 43
           E ED  GG   LD R +HG+   D   G+R++
Sbjct: 630 EVEDIGGGALFLDHRTSHGVGSPDGGHGNRIY 661


>08_01_0220 - 1751367-1752854
          Length = 495

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 151 CDERGALPRPRTAPSSPLSQGVILAPL 231
           C ER  +  P  AP++PL +   L PL
Sbjct: 197 CQERHVVSTPEKAPAAPLPRSEYLRPL 223


>07_01_0674 +
           5047503-5047646,5047808-5047901,5048743-5048828,
           5049380-5049429,5049517-5049586,5049668-5049749,
           5049867-5050267,5050414-5050941,5051823-5052044
          Length = 558

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = +1

Query: 22  HVTLDPRVQPVPGGPIFVPQPVGSPAIKL-SASAYWILRLPFVYCDERGALPRPRTAPSS 198
           H TL+P   P PG P      +G P I L S+SA     +P         LP P   P  
Sbjct: 154 HPTLNPSGAPPPGKPPMYKSSIG-PRIPLPSSSAGASSSMPGTEEAGPSTLPPPPPPPPL 212

Query: 199 PLS 207
           P S
Sbjct: 213 PAS 215


>03_01_0077 - 630807-631094
          Length = 95

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 77 GTKIGPPGTGCTLGSSVTCTGAWA 6
          G  +G  G GC  G    CTGA A
Sbjct: 19 GGVVGVAGAGCNAGQLTVCTGAIA 42


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,595,773
Number of Sequences: 37544
Number of extensions: 222792
Number of successful extensions: 868
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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