BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0951 (553 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1) 31 0.63 SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 30 1.1 SB_32637| Best HMM Match : Glyoxalase (HMM E-Value=1.5e-08) 29 1.9 SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5 SB_26705| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3 SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4 SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8 SB_57137| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7 SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17) 27 7.7 SB_22013| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.54) 27 7.7 SB_48456| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7 SB_38992| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7 SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7 SB_10600| Best HMM Match : XG_FTase (HMM E-Value=1.5) 27 7.7 >SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1) Length = 530 Score = 31.1 bits (67), Expect = 0.63 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +1 Query: 10 QAPVHVTLDPRVQPVPGGPIFVPQPVGSPAIKL 108 QAP+ V + P V P P VPQ VGSP + Sbjct: 407 QAPIAVHVPPAVPQHPAPPPAVPQHVGSPGFSV 439 >SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) Length = 2128 Score = 30.3 bits (65), Expect = 1.1 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = -2 Query: 144 EREAEDPVGGRRQLDGRRAHGLRDEDRPAGHRLHPGVQRDVYR 16 ER +D GRR D RR H +R + G R + R YR Sbjct: 1713 ERPRDDSDRGRRDYDPRRPHDIRPDGDRRGDRPRDELDRKGYR 1755 >SB_32637| Best HMM Match : Glyoxalase (HMM E-Value=1.5e-08) Length = 203 Score = 29.5 bits (63), Expect = 1.9 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Frame = -2 Query: 420 KRYTASEKSNTFYLHALF-RKRSFTSKEASLLKK-FNF 313 KR+ E + F HALF KR T + S++KK FNF Sbjct: 31 KRWRKQETGDDFKAHALFSSKRLLTRRPQSIVKKYFNF 68 >SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 848 Score = 29.1 bits (62), Expect = 2.5 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 Query: 16 PVHVTLDPRVQPVPGGPIFVPQPVGSPAIKLSASAYW 126 P+HV PRV + G P+ +P+ S A ++ A Y+ Sbjct: 186 PLHVNQAPRVIHMAGQPVHFNRPIASEARQVLARPYF 222 >SB_26705| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 157 Score = 28.7 bits (61), Expect = 3.3 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +1 Query: 13 APVHVTLDPRVQPVPGGPIFVPQPVGSPAIKLSASA 120 +P+H+ L P + P P I QP GS + + +A+A Sbjct: 16 SPIHIILGPPLTPTPTQCIEFLQPGGSTSSRAAATA 51 >SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1296 Score = 28.3 bits (60), Expect = 4.4 Identities = 11/37 (29%), Positives = 21/37 (56%) Frame = -3 Query: 320 LTSMTCSFSRILFCKLTLICSSNVQSASPNSGASITP 210 +TS + ++ K+ CS+N SA+P + ++TP Sbjct: 727 VTSTAMETATVMSTKVVTTCSANCPSATPTTSLTMTP 763 >SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1572 Score = 27.9 bits (59), Expect = 5.8 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = +1 Query: 4 HAQAPVHVTLDPRVQPVPGGPIFVPQPVGSPAIKLSASAYWILRLP 141 H + P T PRV P PG P P G+P +L S + RLP Sbjct: 578 HPRVPPPGTPHPRVPP-PGAPHPKVPPPGAPYQRLPYSGAYHPRLP 622 >SB_57137| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 530 Score = 27.5 bits (58), Expect = 7.7 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = -2 Query: 126 PVGGRRQLDGRRAHGLRDEDRPAGHRLHP 40 PV GR HG+ D D+ G +LHP Sbjct: 320 PVRKTAYQTGRAPHGVVDSDKRIGTKLHP 348 >SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17) Length = 722 Score = 27.5 bits (58), Expect = 7.7 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = -2 Query: 159 LVAVHEREAEDPVGGRRQLDGRR 91 L+A+ E+E E+ GGR+Q D R+ Sbjct: 429 LIAMEEKEREELGGGRQQSDARK 451 >SB_22013| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.54) Length = 341 Score = 27.5 bits (58), Expect = 7.7 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -3 Query: 239 SPNSGASITPCDS-GEEGAVRGRGSAPRSSQYTN 141 SP+S + P S G +GA+R S RSS Y N Sbjct: 275 SPSSSINTHPTRSYGSQGALRSSNSFNRSSSYPN 308 >SB_48456| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 365 Score = 27.5 bits (58), Expect = 7.7 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = -3 Query: 254 NVQSASPNSGASITPCDSGEEGAVRGRGSAPRSSQYTNGRRRIQ*ADADSLMAGEPT 84 +VQSA PNS S TP + +G+ + S ++NG D+DS A T Sbjct: 157 HVQSADPNSERSETPTNFASQGS---QVQTVIQSPFSNGSSPTHHGDSDSTDANRFT 210 >SB_38992| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 139 Score = 27.5 bits (58), Expect = 7.7 Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Frame = -2 Query: 147 HEREAEDPVGGRRQLDG-RRAHGLRDEDRPAGHRLHPGVQRD 25 H D G RR DG RR HG D R H G +RD Sbjct: 69 HGGTGRDHGGTRRDHDGTRRDHGGTRRDHGGTRRDHGGTRRD 110 >SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2201 Score = 27.5 bits (58), Expect = 7.7 Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 4/62 (6%) Frame = -3 Query: 227 GASITPCDSGEEGAVRGRG----SAPRSSQYTNGRRRIQ*ADADSLMAGEPTGCGTKIGP 60 GAS P G G V RG S PR Q T G+ +Q P G IGP Sbjct: 532 GASGPPGIPGLNGTVGPRGPQGFSGPRGLQGTPGQNGLQGPPGPQ----GPMGVNNSIGP 587 Query: 59 PG 54 PG Sbjct: 588 PG 589 >SB_10600| Best HMM Match : XG_FTase (HMM E-Value=1.5) Length = 420 Score = 27.5 bits (58), Expect = 7.7 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 102 DGRRAHGLRDEDRPAGHRLHPGVQRDV 22 D RR GLR D G HPG +R V Sbjct: 140 DERRYKGLRSRDNRWGLENHPGYERQV 166 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,421,414 Number of Sequences: 59808 Number of extensions: 245963 Number of successful extensions: 774 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 731 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 774 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1276425465 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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