Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0951
         (553 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    25   1.7  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   2.2  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   2.9  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    24   2.9  
Y17699-1|CAA76819.1|   81|Anopheles gambiae hypothetical protein...    23   6.7  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   8.8  
AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione S-tran...    23   8.8  

>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
 Frame = +1

Query: 94  PAIKLSASAYWILRLPFVYCDERGALPRPRTAPSSPLSQGVILAPLF---GLAD*TLLEQ 264
           P +  +    W      +Y  E+ AL      P     + ++   LF   G+   T L+ 
Sbjct: 52  PTLVDNGHILWESYAILIYLAEKYALD-DSLYPKDVCERSIVHQRLFFDSGMFQNTTLQA 110

Query: 265 INVNLQNNILENEHVMEVK 321
           +  +L+NN + +EH+ +VK
Sbjct: 111 VLSHLRNNPITDEHLAKVK 129


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 116  DADSLMAGEPTGCGTKIGPP 57
            DA S  AG P GCG+ I  P
Sbjct: 1384 DAKSDDAGSPEGCGSNIAFP 1403


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -2

Query: 147 HEREAEDPVGGRRQLDGRRAHGLRDE-DRPAGHR 49
           +E  + + + GRRQ   +   GLR E DR   HR
Sbjct: 470 YEEGSMETLAGRRQALQQEVRGLRSELDRRNAHR 503


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 248 QSASPNSGASITPCDSGEEGAVRGRGSAPRSSQYT 144
           QS +P +GA  T  +S   GAV G   +     YT
Sbjct: 68  QSYNPLAGAGATSVNSASTGAVGGGHQSTDMVDYT 102


>Y17699-1|CAA76819.1|   81|Anopheles gambiae hypothetical protein
           protein.
          Length = 81

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -3

Query: 290 ILFCKLTLICSSNVQSASPNSGASITPCDSGE 195
           +L C L+++C     +A+    A+    DS E
Sbjct: 8   LLVCLLSVVCCEEASTAAEKEQATTEASDSDE 39


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 266 ICSSNVQSASPNSGASITP 210
           IC SN+  AS +S  S++P
Sbjct: 168 ICGSNIPQASGHSKNSLSP 186


>AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione
           S-transferase u2 protein.
          Length = 222

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 397 FLTSSVSFLNIYIDALRKGSILKFNIP 477
           +L  S + L+  IDA R G  L  NIP
Sbjct: 64  YLGESRAILSYLIDAYRPGHTLYPNIP 90


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,588
Number of Sequences: 2352
Number of extensions: 8364
Number of successful extensions: 30
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)