Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0950
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    26   1.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   6.0  
AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    24   6.0  
AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding pr...    23   7.9  
AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding pr...    23   7.9  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   7.9  

>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 13/42 (30%), Positives = 16/42 (38%)
 Frame = -1

Query: 675 LKFLATYANSTNSSSFLQTVDYLFPHGCLSYISWYCVICCNL 550
           LK LA Y        FL+ +    P G   Y  W    C N+
Sbjct: 389 LKELAEYCGEEKDKEFLRFISSTAPDGKAKYQEWVQDSCRNI 430


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 513 AGQVLRC*QPNLLTNMRPTVAGATSSSITISRSHLHLVRGG 391
           +G   RC +P++ +   PT A  +SSS + S +    + GG
Sbjct: 773 SGSGSRCSKPSVTSTTPPTPASLSSSSSSSSSASSTSLCGG 813


>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 316 RKMYQYWNNPKHPTALHQE 372
           R  Y YW+N + PT  +Q+
Sbjct: 23  RNRYNYWSNRQFPTLPNQK 41


>AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding
           protein AgamOBP32 protein.
          Length = 320

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +3

Query: 507 DLLFHHFLMKSRVYSNYNKLHSTRIY-NLNNH 599
           D L   FL++S +YS  +  H  R+Y   NN+
Sbjct: 190 DCLARCFLLRSGLYSEQHGPHLDRLYVQCNNY 221


>AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding
           protein AgamOBP33 protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +3

Query: 507 DLLFHHFLMKSRVYSNYNKLHSTRIY-NLNNH 599
           D L   FL++S +YS  +  H  R+Y   NN+
Sbjct: 190 DCLARCFLLRSGLYSEQHGPHLDRLYVQCNNY 221


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 185 ENKDIKKI*ELNSLVRYDPFPELQQIENTNPHY 283
           E KD K + EL +++R +  P+L+++     HY
Sbjct: 186 EKKDAK-LNELYAVIREEIEPKLEKLRKEREHY 217


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,087
Number of Sequences: 2352
Number of extensions: 14710
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)