BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0950 (774 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 23 3.2 AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 3.2 AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 22 5.5 DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 9.6 DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 9.6 DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.6 DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.6 DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.6 DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.6 AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.6 AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.6 AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.6 AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.6 >DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. Length = 495 Score = 23.0 bits (47), Expect = 3.2 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = -1 Query: 474 TNMRPTVAGATSSSITISRSHL 409 T PT +T++S TIS+ H+ Sbjct: 382 TTASPTTEPSTTTSTTISQKHI 403 >AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex determiner protein. Length = 419 Score = 23.0 bits (47), Expect = 3.2 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +3 Query: 546 YSNYNKLHSTRIYNLNNHGGINSR 617 YSNYN ++ YN NN+ N + Sbjct: 324 YSNYNNYNN---YNNNNYNNYNKK 344 >AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase protein. Length = 510 Score = 22.2 bits (45), Expect = 5.5 Identities = 7/30 (23%), Positives = 19/30 (63%) Frame = +2 Query: 227 VRYDPFPELQQIENTNPHYQNIVRRIHCQL 316 VRYDP+ + +I ++ N++ +++ ++ Sbjct: 466 VRYDPYTQRVEILDSVDRLDNLMAQVNTEM 495 >DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 21.4 bits (43), Expect = 9.6 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = +3 Query: 546 YSNYNKLHSTRIYNLNNHGGINSRQ 620 YSNYN ++ N NN+ N ++ Sbjct: 91 YSNYNNYNNNYNNNYNNNYNNNYKK 115 >DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 21.4 bits (43), Expect = 9.6 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = +3 Query: 546 YSNYNKLHSTRIYNLNNHGGINSRQ 620 YSNYN ++ N NN+ N ++ Sbjct: 91 YSNYNNYNNNYNNNYNNNYNNNYKK 115 >DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 21.4 bits (43), Expect = 9.6 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = +3 Query: 546 YSNYNKLHSTRIYNLN 593 Y+NYN + YN+N Sbjct: 91 YNNYNNNYKPLYYNIN 106 >DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 21.4 bits (43), Expect = 9.6 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = +3 Query: 546 YSNYNKLHSTRIYNLN 593 Y+NYN + YN+N Sbjct: 91 YNNYNNNYKPLYYNIN 106 >DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 21.4 bits (43), Expect = 9.6 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = +3 Query: 546 YSNYNKLHSTRIYNLN 593 Y+NYN + YN+N Sbjct: 91 YNNYNNNYKPLYYNIN 106 >DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 21.4 bits (43), Expect = 9.6 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = +3 Query: 546 YSNYNKLHSTRIYNLN 593 Y+NYN + YN+N Sbjct: 91 YNNYNNNYKPLYYNIN 106 >AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.4 bits (43), Expect = 9.6 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = +3 Query: 546 YSNYNKLHSTRIYNLN 593 Y+NYN + YN+N Sbjct: 324 YNNYNNNYKPLYYNIN 339 >AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.4 bits (43), Expect = 9.6 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = +3 Query: 546 YSNYNKLHSTRIYNLN 593 Y+NYN + YN+N Sbjct: 324 YNNYNNNYKPLYYNIN 339 >AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.4 bits (43), Expect = 9.6 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = +3 Query: 546 YSNYNKLHSTRIYNLN 593 Y+NYN + YN+N Sbjct: 324 YNNYNNNYKPLYYNIN 339 >AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 21.4 bits (43), Expect = 9.6 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = +3 Query: 546 YSNYNKLHSTRIYNLN 593 Y+NYN + YN+N Sbjct: 313 YNNYNNNYKPLYYNIN 328 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 203,714 Number of Sequences: 438 Number of extensions: 4651 Number of successful extensions: 36 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 36 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 24275400 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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