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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0950
         (774 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   3.2  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   3.2  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   5.5  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   9.6  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   9.6  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    21   9.6  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    21   9.6  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    21   9.6  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    21   9.6  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    21   9.6  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    21   9.6  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    21   9.6  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    21   9.6  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 474 TNMRPTVAGATSSSITISRSHL 409
           T   PT   +T++S TIS+ H+
Sbjct: 382 TTASPTTEPSTTTSTTISQKHI 403


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 546 YSNYNKLHSTRIYNLNNHGGINSR 617
           YSNYN  ++   YN NN+   N +
Sbjct: 324 YSNYNNYNN---YNNNNYNNYNKK 344


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/30 (23%), Positives = 19/30 (63%)
 Frame = +2

Query: 227 VRYDPFPELQQIENTNPHYQNIVRRIHCQL 316
           VRYDP+ +  +I ++     N++ +++ ++
Sbjct: 466 VRYDPYTQRVEILDSVDRLDNLMAQVNTEM 495


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 546 YSNYNKLHSTRIYNLNNHGGINSRQ 620
           YSNYN  ++    N NN+   N ++
Sbjct: 91  YSNYNNYNNNYNNNYNNNYNNNYKK 115


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 546 YSNYNKLHSTRIYNLNNHGGINSRQ 620
           YSNYN  ++    N NN+   N ++
Sbjct: 91  YSNYNNYNNNYNNNYNNNYNNNYKK 115


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 546 YSNYNKLHSTRIYNLN 593
           Y+NYN  +    YN+N
Sbjct: 91  YNNYNNNYKPLYYNIN 106


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 546 YSNYNKLHSTRIYNLN 593
           Y+NYN  +    YN+N
Sbjct: 91  YNNYNNNYKPLYYNIN 106


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 546 YSNYNKLHSTRIYNLN 593
           Y+NYN  +    YN+N
Sbjct: 91  YNNYNNNYKPLYYNIN 106


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 546 YSNYNKLHSTRIYNLN 593
           Y+NYN  +    YN+N
Sbjct: 91  YNNYNNNYKPLYYNIN 106


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 546 YSNYNKLHSTRIYNLN 593
           Y+NYN  +    YN+N
Sbjct: 324 YNNYNNNYKPLYYNIN 339


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 546 YSNYNKLHSTRIYNLN 593
           Y+NYN  +    YN+N
Sbjct: 324 YNNYNNNYKPLYYNIN 339


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 546 YSNYNKLHSTRIYNLN 593
           Y+NYN  +    YN+N
Sbjct: 324 YNNYNNNYKPLYYNIN 339


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 546 YSNYNKLHSTRIYNLN 593
           Y+NYN  +    YN+N
Sbjct: 313 YNNYNNNYKPLYYNIN 328


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,714
Number of Sequences: 438
Number of extensions: 4651
Number of successful extensions: 36
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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