Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0950
(774 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 23 3.2
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 3.2
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 22 5.5
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 9.6
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 9.6
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.6
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.6
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.6
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.6
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 23.0 bits (47), Expect = 3.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 474 TNMRPTVAGATSSSITISRSHL 409
T PT +T++S TIS+ H+
Sbjct: 382 TTASPTTEPSTTTSTTISQKHI 403
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 546 YSNYNKLHSTRIYNLNNHGGINSR 617
YSNYN ++ YN NN+ N +
Sbjct: 324 YSNYNNYNN---YNNNNYNNYNKK 344
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/30 (23%), Positives = 19/30 (63%)
Frame = +2
Query: 227 VRYDPFPELQQIENTNPHYQNIVRRIHCQL 316
VRYDP+ + +I ++ N++ +++ ++
Sbjct: 466 VRYDPYTQRVEILDSVDRLDNLMAQVNTEM 495
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 546 YSNYNKLHSTRIYNLNNHGGINSRQ 620
YSNYN ++ N NN+ N ++
Sbjct: 91 YSNYNNYNNNYNNNYNNNYNNNYKK 115
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 546 YSNYNKLHSTRIYNLNNHGGINSRQ 620
YSNYN ++ N NN+ N ++
Sbjct: 91 YSNYNNYNNNYNNNYNNNYNNNYKK 115
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 546 YSNYNKLHSTRIYNLN 593
Y+NYN + YN+N
Sbjct: 91 YNNYNNNYKPLYYNIN 106
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 546 YSNYNKLHSTRIYNLN 593
Y+NYN + YN+N
Sbjct: 91 YNNYNNNYKPLYYNIN 106
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 546 YSNYNKLHSTRIYNLN 593
Y+NYN + YN+N
Sbjct: 91 YNNYNNNYKPLYYNIN 106
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 546 YSNYNKLHSTRIYNLN 593
Y+NYN + YN+N
Sbjct: 91 YNNYNNNYKPLYYNIN 106
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 546 YSNYNKLHSTRIYNLN 593
Y+NYN + YN+N
Sbjct: 324 YNNYNNNYKPLYYNIN 339
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 546 YSNYNKLHSTRIYNLN 593
Y+NYN + YN+N
Sbjct: 324 YNNYNNNYKPLYYNIN 339
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 546 YSNYNKLHSTRIYNLN 593
Y+NYN + YN+N
Sbjct: 324 YNNYNNNYKPLYYNIN 339
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 546 YSNYNKLHSTRIYNLN 593
Y+NYN + YN+N
Sbjct: 313 YNNYNNNYKPLYYNIN 328
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,714
Number of Sequences: 438
Number of extensions: 4651
Number of successful extensions: 36
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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