Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0949
(759 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF283275-1|AAG15376.1| 133|Anopheles gambiae small heat shock p... 141 2e-35
AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein. 26 1.5
AF063021-4|AAC16248.1| 93|Anopheles gambiae unknown protein. 26 1.5
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 25 2.5
CR954257-3|CAJ14154.1| 277|Anopheles gambiae predicted protein ... 25 3.3
AF000953-1|AAB96576.1| 433|Anopheles gambiae carboxypeptidase A... 24 4.4
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 24 5.9
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 24 5.9
DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein. 24 5.9
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein. 23 7.7
>AF283275-1|AAG15376.1| 133|Anopheles gambiae small heat shock
protein protein.
Length = 133
Score = 141 bits (342), Expect = 2e-35
Identities = 67/125 (53%), Positives = 84/125 (67%), Gaps = 1/125 (0%)
Frame = +3
Query: 234 DVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRY 413
D GS + +KDKFQ+NLDVQ FSPEEISVK D V+VEGKHEE+QD+HGY+SR F RRY
Sbjct: 3 DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRY 62
Query: 414 ALPENCNPDTVESRLSSDGVLTVIAPRTPAATKN-ERAVPITQTGPVRKEIKEPTAEVES 590
LP+ N + S LSSDG+LT+ PR KN ER++PIT TG K++ A
Sbjct: 63 MLPKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQVTGKAAPENG 122
Query: 591 NETKQ 605
+ K+
Sbjct: 123 HSKKE 127
>AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein.
Length = 401
Score = 25.8 bits (54), Expect = 1.5
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 194 LLPAVEADGDGQ*RRRFHHHLE*GQIPGQLRRSTLFARRNLSE 322
+L +V+ Q + +H++LE GQ PGQL S + A ++ E
Sbjct: 143 VLMSVQGGASKQALKYYHYYLE-GQPPGQLLSSIIAAVYSVPE 184
>AF063021-4|AAC16248.1| 93|Anopheles gambiae unknown protein.
Length = 93
Score = 25.8 bits (54), Expect = 1.5
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 334 ATSSSKVSTRRGRT--SMATSLVSSRGVTLCLKTATLTLSNLGC 459
A+ S + T RGR TS SR LC+ +LTLS+ C
Sbjct: 12 ASPSRPILTTRGRRWPRPPTSCWPSRRSRLCIIALSLTLSSSSC 55
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 25.0 bits (52), Expect = 2.5
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 503 SRSPG-SDHGQHAVRGQPRFDSVRVAVFRQSVTPREL 396
+R PG ++ +HA+ PRFDS R + V P L
Sbjct: 1017 TRCPGVAESAEHAMFECPRFDSTRTELL-HGVVPETL 1052
>CR954257-3|CAJ14154.1| 277|Anopheles gambiae predicted protein
protein.
Length = 277
Score = 24.6 bits (51), Expect = 3.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 678 QARTRNANKINTRYTFLIHSVPRVIVLFRCSQLPQWAP*SPSGPDRF 538
Q +T N+ N RYTFL+ + C Q+ + + P GP R+
Sbjct: 154 QTQTFARNRPNVRYTFLLRQLNHGGDHAECGQVERKS--QPFGPARW 198
>AF000953-1|AAB96576.1| 433|Anopheles gambiae carboxypeptidase A
protein.
Length = 433
Score = 24.2 bits (50), Expect = 4.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 551 PEGD*GAHCGS*EQRNK 601
P GD GAHCG+ + N+
Sbjct: 321 PYGDTGAHCGNHQDLNE 337
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.8 bits (49), Expect = 5.9
Identities = 14/79 (17%), Positives = 32/79 (40%)
Frame = +3
Query: 327 ADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAA 506
+DG + + H + H + ++ + +P T S + +++ R A
Sbjct: 83 SDGPMPAQPPHHHQHPHHHQLPHHPHHQHHPQQQPSPQTSPPASISFSITNILSDRFGKA 142
Query: 507 TKNERAVPITQTGPVRKEI 563
T ++ P Q+ +R+ I
Sbjct: 143 TAEQQQQPHPQSPAIREPI 161
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.8 bits (49), Expect = 5.9
Identities = 14/79 (17%), Positives = 32/79 (40%)
Frame = +3
Query: 327 ADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAA 506
+DG + + H + H + ++ + +P T S + +++ R A
Sbjct: 83 SDGPMPAQPPHHHQHPHHHQLPHHPHHQHHPQQQPSPQTSPPASISFSITNILSDRFGKA 142
Query: 507 TKNERAVPITQTGPVRKEI 563
T ++ P Q+ +R+ I
Sbjct: 143 TAEQQQQPHPQSPAIREPI 161
>DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein.
Length = 847
Score = 23.8 bits (49), Expect = 5.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 260 IRGDGGTDVSIGHRHLLPRPVVISGHR 180
+RG G +V I H +PRP + + R
Sbjct: 466 VRGCFGEEVDIAHPVTVPRPAITAPTR 492
>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
Length = 1231
Score = 23.4 bits (48), Expect = 7.7
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 35 SLDISHPKTKYKNVTAAIHPGIPT*PPSR 121
+++++ PK +Y NVT+ H + P R
Sbjct: 695 NMEVNKPKNRYANVTSYDHSRVILPPIER 723
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,401
Number of Sequences: 2352
Number of extensions: 13394
Number of successful extensions: 44
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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