BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0944 (754 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value EF471398-1|ABO69624.1| 531|Homo sapiens mahogunin variant 2.2 p... 31 5.9 EF471397-1|ABO69623.1| 555|Homo sapiens mahogunin variant 1.2 p... 31 5.9 BC050389-1|AAH50389.1| 576|Homo sapiens mahogunin, ring finger ... 31 5.9 AB011116-1|BAA25470.1| 583|Homo sapiens KIAA0544 protein protein. 31 5.9 >EF471398-1|ABO69624.1| 531|Homo sapiens mahogunin variant 2.2 protein. Length = 531 Score = 30.7 bits (66), Expect = 5.9 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = +2 Query: 140 NSHNDSRCI--MEDLPDTLRQPCKSTDTMCRKISQVVEFEMNGMP 268 NS N + C+ + DL DTL PC+ +C + + ++ N P Sbjct: 272 NSDNSNECVVCLSDLRDTLILPCRHL-CLCTSCADTLRYQANNCP 315 >EF471397-1|ABO69623.1| 555|Homo sapiens mahogunin variant 1.2 protein. Length = 555 Score = 30.7 bits (66), Expect = 5.9 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = +2 Query: 140 NSHNDSRCI--MEDLPDTLRQPCKSTDTMCRKISQVVEFEMNGMP 268 NS N + C+ + DL DTL PC+ +C + + ++ N P Sbjct: 272 NSDNSNECVVCLSDLRDTLILPCRHL-CLCTSCADTLRYQANNCP 315 >BC050389-1|AAH50389.1| 576|Homo sapiens mahogunin, ring finger 1 protein. Length = 576 Score = 30.7 bits (66), Expect = 5.9 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = +2 Query: 140 NSHNDSRCI--MEDLPDTLRQPCKSTDTMCRKISQVVEFEMNGMP 268 NS N + C+ + DL DTL PC+ +C + + ++ N P Sbjct: 271 NSDNSNECVVCLSDLRDTLILPCRHL-CLCTSCADTLRYQANNCP 314 >AB011116-1|BAA25470.1| 583|Homo sapiens KIAA0544 protein protein. Length = 583 Score = 30.7 bits (66), Expect = 5.9 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = +2 Query: 140 NSHNDSRCI--MEDLPDTLRQPCKSTDTMCRKISQVVEFEMNGMP 268 NS N + C+ + DL DTL PC+ +C + + ++ N P Sbjct: 302 NSDNSNECVVCLSDLRDTLILPCRHL-CLCTSCADTLRYQANNCP 345 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 97,766,505 Number of Sequences: 237096 Number of extensions: 1845562 Number of successful extensions: 4897 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4685 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4897 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 9071127468 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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