Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0943
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   1.8  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   1.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   4.2  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   4.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   5.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   5.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.7  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 372 KLKVALNVSET*PQRTHCSCGRRA 443
           +L     + ET PQRT  + G+RA
Sbjct: 68  QLPTVTEIQETQPQRTKPTAGKRA 91


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 372 KLKVALNVSET*PQRTHCSCGRRA 443
           +L     + ET PQRT  + G+RA
Sbjct: 59  QLPTVTEIQETQPQRTKPTAGKRA 82


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 335 FTLPLVERALITEIKSSPECF*DLTT 412
           F+LP V      +++S P+C+ DL T
Sbjct: 175 FSLPTVFLFEEKQVQSMPQCWIDLQT 200


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 299 PAYVACGSMFDRFTLPLVERALITEIKSSP 388
           P +   G + +RFT   V  AL+T  ++ P
Sbjct: 217 PKHDGRGRIVERFTSDRVHAALVTSPRARP 246


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 112 HHSTYHFSAPY 80
           H+S YH+  PY
Sbjct: 38  HYSNYHYEDPY 48


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 112 HHSTYHFSAPY 80
           H+S YH+  PY
Sbjct: 38  HYSNYHYEDPY 48


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 112 HHSTYHFSAPY 80
           H+S YH+  PY
Sbjct: 38  HYSNYHYEDPY 48


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 541 VIRKVFEMAELILRLNYKNSF 603
           ++R+ F +   ILR  YKN +
Sbjct: 478 ILRRRFALINSILRKLYKNKY 498


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,455
Number of Sequences: 336
Number of extensions: 2671
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)