BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0943 (700 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE014297-1924|AAF55118.1| 868|Drosophila melanogaster CG3837-PA... 31 2.0 AE014298-3023|AAF50903.1| 95|Drosophila melanogaster CG15456-P... 29 4.6 BT028775-1|ABI34156.1| 220|Drosophila melanogaster IP02067p pro... 29 6.1 AE014134-2221|AAF53203.1| 220|Drosophila melanogaster CG17031-P... 29 6.1 >AE014297-1924|AAF55118.1| 868|Drosophila melanogaster CG3837-PA protein. Length = 868 Score = 30.7 bits (66), Expect = 2.0 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%) Frame = -1 Query: 436 RPQLQCVLCGQVSETFRATFNFCNKC-SFNKRQSEP 332 RPQ QC LCG +S F N +C + N Q P Sbjct: 187 RPQSQCPLCGSLSADFEFIRNSSERCWNVNTTQLRP 222 >AE014298-3023|AAF50903.1| 95|Drosophila melanogaster CG15456-PA protein. Length = 95 Score = 29.5 bits (63), Expect = 4.6 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = +3 Query: 321 VCSIGSLCRLLNEHLLQKLKVALNVSET*PQRTHCSCGRRAALLICMDGPLIHESSS 491 +C+ C LL E LL L++S C GRR + + +DG L+H S Sbjct: 11 ICNFSGQCHLLREFLLAS-SPDLDIS--------CRTGRRGSFEVSIDGQLVHSKLS 58 >BT028775-1|ABI34156.1| 220|Drosophila melanogaster IP02067p protein. Length = 220 Score = 29.1 bits (62), Expect = 6.1 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +1 Query: 496 EGGLHNIKMSTNSTSVIRKVFEMAELILRLNYKNSFI*KCSL 621 EGGL I+ S N T IRK E +L+ K + + C+L Sbjct: 41 EGGLRGIQRSRNGTGFIRKSKFKQETLLKPPKKPTLVMVCNL 82 >AE014134-2221|AAF53203.1| 220|Drosophila melanogaster CG17031-PA protein. Length = 220 Score = 29.1 bits (62), Expect = 6.1 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +1 Query: 496 EGGLHNIKMSTNSTSVIRKVFEMAELILRLNYKNSFI*KCSL 621 EGGL I+ S N T IRK E +L+ K + + C+L Sbjct: 41 EGGLRGIQRSRNGTGFIRKSKFKQETLLKPPKKPTLVMVCNL 82 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 26,493,787 Number of Sequences: 53049 Number of extensions: 466826 Number of successful extensions: 1261 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1250 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1261 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3067209849 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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