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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0942
         (694 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g17910.1 68418.m02100 expressed protein                             31   0.73 
At1g11400.2 68414.m01310 expressed protein                             30   1.3  
At1g11400.1 68414.m01309 expressed protein                             30   1.3  
At1g71150.1 68414.m08210 expressed protein  ; expression support...    29   2.2  
At1g73370.1 68414.m08492 sucrose synthase, putative / sucrose-UD...    29   3.9  
At5g27330.1 68418.m03263 expressed protein                             28   5.1  
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom...    28   6.8  
At1g71760.1 68414.m08294 hypothetical protein                          28   6.8  
At5g35810.1 68418.m04303 hypothetical protein                          27   8.9  
At3g30370.1 68416.m03834 hypothetical protein                          27   8.9  
At3g26880.1 68416.m03363 self-incompatibility protein-related si...    27   8.9  

>At5g17910.1 68418.m02100 expressed protein
          Length = 1342

 Score = 31.1 bits (67), Expect = 0.73
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +1

Query: 52  RQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLE 210
           RQ+  + E K+ ++   +S  T   D +K   E N+D++  +AK D V+   E
Sbjct: 524 RQLSEVSESKVSSIPDTESVCTVLEDDEKKVDENNADRETKIAKVDMVSDNDE 576


>At1g11400.2 68414.m01310 expressed protein
          Length = 204

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = +1

Query: 70  IEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARD 222
           +E +IR L K+K +LT  +  + A ++LN +Q    +K +E  Q L+   D
Sbjct: 152 VEKRIRAL-KKKIRLTEAQQQKTASRDLNPEQLEKFSKLEEWRQELKALED 201


>At1g11400.1 68414.m01309 expressed protein
          Length = 204

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = +1

Query: 70  IEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARD 222
           +E +IR L K+K +LT  +  + A ++LN +Q    +K +E  Q L+   D
Sbjct: 152 VEKRIRAL-KKKIRLTEAQQQKTASRDLNPEQLEKFSKLEEWRQELKALED 201


>At1g71150.1 68414.m08210 expressed protein  ; expression supported
           by MPSS
          Length = 351

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 1   DAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKR 102
           D KS K +SSE      R++ ++IEH +  L+ R
Sbjct: 304 DVKSSKNSSSEALSGSCRRLQSLIEHMVTELDTR 337


>At1g73370.1 68414.m08492 sucrose synthase, putative / sucrose-UDP
           glucosyltransferase, putative similar to sucrose
           synthase GI:6682841 from [Citrus unshiu]
          Length = 942

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +1

Query: 109 KLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARDLSKQVT 240
           KL     L    +++N DQK A  +Y E+   L+F + L+K+VT
Sbjct: 766 KLLKMGSLYGFWRQVNEDQKKAKKRYIEMLYNLQF-KQLTKKVT 808


>At5g27330.1 68418.m03263 expressed protein
          Length = 628

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +1

Query: 34  DKDTPIRQIMTIIEHKIRNLEKRK---SKLTSYRDLQKAGKELNSDQ 165
           D++T IR +       IR LE  +   S++   RDL K+G +L S++
Sbjct: 141 DRETEIRDLKREANGLIRKLESEREEFSRVCDERDLVKSGFDLQSEE 187


>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
           domain, PF03343: SART-1 family
          Length = 820

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 85  RNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARDLS 228
           RN++K+KSKL    D    GKE    +     K   + +T EF R L+
Sbjct: 649 RNMDKKKSKLVGIVD-DDGGKESKDKESKDRFKDIRIERTDEFGRTLT 695


>At1g71760.1 68414.m08294 hypothetical protein
          Length = 259

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +1

Query: 391 FINGTNGAAKLTEDDLKILDDLYPEVTPKHELNEE 495
           F+   N + K+ +++   + D +PEV  + E+NEE
Sbjct: 56  FVQSFNMSRKVADEEAHAVGDSFPEVYVEGEVNEE 90


>At5g35810.1 68418.m04303 hypothetical protein
          Length = 347

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = -3

Query: 425 VNLAAPFVPFMKSVLASALPICIRQSRISKTSFILLVSAA*RTQASFLACFF 270
           + L A FV  +  VLA    + + + +  K S ILLV  A  T  SF+   F
Sbjct: 270 LGLLALFVSIISMVLAFTATLILIRDQEPKWSLILLVYVASATALSFVVLHF 321


>At3g30370.1 68416.m03834 hypothetical protein
          Length = 179

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 430 DDLKILDDLYPEVTPKHELNEEGQSGFHLQITRAAEHLY 546
           D+ +I  D+YPE     E N+E ++ F   + R   HLY
Sbjct: 35  DEPQIHHDVYPE--SDREENDEDEARFQTHLQRGDGHLY 71


>At3g26880.1 68416.m03363 self-incompatibility protein-related
           similar to S1 self-incompatibility protein [Papaver
           rhoeas] GI:452430
          Length = 133

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 577 LGTTYLRIKEIVSTVHECGYFDKTGRWCN 663
           +G  YL+I E++S   +  ++  T  WCN
Sbjct: 51  IGVKYLKIGEVMSFSFKTNFWGTTEFWCN 79


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.314    0.131    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,184,494
Number of Sequences: 28952
Number of extensions: 242352
Number of successful extensions: 464
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)

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