Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0934
(697 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 59 3e-11
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 37 1e-04
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 37 1e-04
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 35 6e-04
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 7.3
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 21 7.3
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 21 7.3
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 21 7.3
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 21 9.6
AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory recept... 21 9.6
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 59.3 bits (137), Expect = 3e-11
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 7/162 (4%)
Frame = +1
Query: 232 NLINLQSLLMFGNKIEVF-NENITTLRKLKVLDLSRNELKSIPE-SLNNMKELTSINFSS 405
+L+ L+ + ++ F ++ I L +L+ LDLS N L+++P+ S + ++ L ++
Sbjct: 16 SLLTLKLTHALSSSVQNFPSDAIKILNRLEELDLSNNRLRNVPDNSFHFLRSLKKVHLQD 75
Query: 406 NQIEDMPK---IGDLP-NLIIIDISNNKLKSFLDVESANLPHLTDLKLKSNLIESIPSCI 573
N IE + + GD+ +L + S N +++ A+L L + L N IES+
Sbjct: 76 NTIEMIHRGTFQGDIHRDLTEVYFSFNSVRNVQQHTFADLIQLEQIHLDDNRIESLERRA 135
Query: 574 GQKLSSLKNFDISDNQITVVPGEV-ANISKIKDLNLKGNKLS 696
L SLK ++ N+I + E N+ +++DL+L N +S
Sbjct: 136 FMNLKSLKRLNLKGNKIATIAYETFQNLPELEDLDLAYNSIS 177
Score = 51.6 bits (118), Expect = 6e-09
Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Frame = +1
Query: 304 LRKLKVLDLSRNELKSIPESLNNMKELT--SINFSSNQIEDMPK--IGDLPNLIIIDISN 471
L+ +KVLDLS N + S+ + EL+ + N++ + K G++P+L ++D+S+
Sbjct: 222 LQNIKVLDLSFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSH 281
Query: 472 NKLKSFLDVES-ANLPHLTDLKLKSNLIESIPSCIGQKLSSLKNFDISDNQITVVPGEVA 648
N L LD ++ N L L N I IP+ + + L +L+ D S N++ +P +
Sbjct: 282 NSLYE-LDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHNRLRSLPDNLF 340
Query: 649 NISKIKDLNLKGNKL 693
+ ++ L++ N L
Sbjct: 341 RETGLERLDVSHNLL 355
Score = 42.3 bits (95), Expect = 4e-06
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Frame = +1
Query: 313 LKVLDLSRNELKSIPE-SLNNMKELTSINFSSN-----QIEDMPKIGDLPNLIIIDISNN 474
L LDLS N L I + + L S+N N +I + G L+ +++ N
Sbjct: 396 LSWLDLSYNRLGQIDAGTFKGIPRLASLNLGHNSQLTLEINGLSFQGLEYTLLHLNLDNV 455
Query: 475 KLKSFLDVESANLPHLTDLKLKSNLIESIPSCIGQKLSSLKNFDISDNQITVVPGEVANI 654
L V + + P+L L L N + ++ + +SSL+ ++ N ++ VP ++
Sbjct: 456 SLSQ---VPALSTPNLLSLSLAFNSLPTVALEVAGNISSLRYLNLDYNDLSAVPIVTHSL 512
Query: 655 SKIKDLNLKGNKLS 696
++++ L+L+GN ++
Sbjct: 513 TELRHLSLEGNPIT 526
Score = 39.5 bits (88), Expect = 3e-05
Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Frame = +1
Query: 193 SDTCLHAIPDEIKNLI-NLQSLLMFGNKIEVFNENI---TTLRKLKVLDLSRNELKSIPE 360
S+ L +PD + + +L+ + + N IE+ + R L + S N ++++ +
Sbjct: 50 SNNRLRNVPDNSFHFLRSLKKVHLQDNTIEMIHRGTFQGDIHRDLTEVYFSFNSVRNVQQ 109
Query: 361 -SLNNMKELTSINFSSNQIEDMPKIG--DLPNLIIIDISNNKLKSFLDVESANLPHLTDL 531
+ ++ +L I+ N+IE + + +L +L +++ NK+ + NLP L DL
Sbjct: 110 HTFADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKIATIAYETFQNLPELEDL 169
Query: 532 KLKSNLIESIPSCIGQKLSSLKNFDIS 612
L N I S+ I ++ SL F ++
Sbjct: 170 DLAYNSISSLDFNIFDQVGSLGMFHVN 196
Score = 33.1 bits (72), Expect = 0.002
Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Frame = +1
Query: 364 LNNMKELTSINFSSNQIEDMPKIGDLP---NLIIIDISNNKLKSFLDVESANLPHLTDLK 534
L ++ + ++ S N I + K P +L+ + + +NKL + N+PHL L
Sbjct: 219 LGGLQNIKVLDLSFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLD 278
Query: 535 LKSNLIESIPSCIGQKLSSLKNFDISDNQITVVPGEVAN-ISKIKDLNLKGNKL 693
L N + + + L+ D S N+I+ +P ++ + ++ ++ N+L
Sbjct: 279 LSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHNRL 332
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 37.1 bits (82), Expect = 1e-04
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +1
Query: 196 DTCLHAIPDEIKNLINLQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSI-PESLNN 372
DTC I E K LIN SL + NK++ N++ LR L L+R + K P N
Sbjct: 90 DTCQQGIYPENKTLINETSLQLDENKLDKKNDDSPALRAL----LTRPQAKKTPPNQYEN 145
Query: 373 MKELTSINFSS--NQIEDMP 426
++ + NFS+ N + + P
Sbjct: 146 FQQYDNNNFSAEENSVSEPP 165
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 37.1 bits (82), Expect = 1e-04
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +1
Query: 196 DTCLHAIPDEIKNLINLQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSI-PESLNN 372
DTC I E K LIN SL + NK++ N++ LR L L+R + K P N
Sbjct: 90 DTCQQGIYPENKTLINETSLQLDENKLDKKNDDSPALRAL----LTRPQAKKTPPNQYEN 145
Query: 373 MKELTSINFSS--NQIEDMP 426
++ + NFS+ N + + P
Sbjct: 146 FQQYDNNNFSAEENSVSEPP 165
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 35.1 bits (77), Expect = 6e-04
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +1
Query: 196 DTCLHAIPDEIKNLINLQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSI-PESLNN 372
DTC I E K LIN SL + NK++ +++ LR L L+R + K P N
Sbjct: 90 DTCQQGIYPENKTLINETSLQLDENKLDKKDDDSPALRAL----LTRPQAKKTPPNQYEN 145
Query: 373 MKELTSINFSS--NQIEDMP 426
++ + NFS+ N + + P
Sbjct: 146 FQQYDNNNFSAEENSVSEPP 165
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 500 STSKKLFSLLLEMSIIIKFGKS 435
S S KLF+ + +S+++ FG S
Sbjct: 234 SKSVKLFNEVFGVSLLVLFGNS 255
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor
candidate 3 protein.
Length = 398
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 500 STSKKLFSLLLEMSIIIKFGKS 435
S S KLF+ + +S+++ FG S
Sbjct: 252 SKSVKLFNEVFGVSLLVLFGNS 273
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -2
Query: 666 FNFRYVSYFARYNSY 622
FN++Y ++ YN+Y
Sbjct: 213 FNYQYNQAYSNYNNY 227
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -2
Query: 666 FNFRYVSYFARYNSY 622
FN++Y ++ YN+Y
Sbjct: 233 FNYQYNQAYSNYNNY 247
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 80 RRIVTKLSWREPL 118
+R+V +WREPL
Sbjct: 253 KRVVKLSNWREPL 265
>AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory receptor
candidate 34 protein.
Length = 324
Score = 21.0 bits (42), Expect = 9.6
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = +1
Query: 274 IEVFNENITTLRKLKVLDLSRNELKSIPESLNNMKELTSINF 399
IE++++ + +LD +++ + + L N K +TS F
Sbjct: 134 IEIYSQFLYGFMIYLILDTIKSKYRQMHRLLANYKVITSDEF 175
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,198
Number of Sequences: 336
Number of extensions: 3048
Number of successful extensions: 24
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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