Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0934
(697 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 62 1e-10
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 52 1e-07
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 49 6e-07
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 49 7e-07
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 49 7e-07
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 42 6e-05
SPBC336.08 |spc24||spindle pole body protein Spc24|Schizosacchar... 29 0.64
SPAC8F11.07c |cdc24||DNA replication protein Cdc24|Schizosacchar... 27 2.6
SPAP8A3.10 |||mitochondrial intermembrane space protein sorting ... 27 3.4
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 26 4.5
SPAC6F12.08c |||exocyst complex subunit Exo84|Schizosaccharomyce... 26 4.5
SPAC3H8.10 |spo20|sec14|sec14 cytosolic factor family Sec14|Schi... 26 4.5
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 5.9
SPBC1861.08c |||U2 snRNP-associated protein Lea1 |Schizosaccharo... 26 5.9
SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subu... 26 5.9
SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces pom... 26 5.9
SPAC13A11.06 ||SPAC3H8.01|pyruvate decarboxylase |Schizosaccharo... 26 5.9
SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces pombe... 25 7.8
SPAC4G9.10 |arg3||ornithine carbamoyltransferase Arg3|Schizosacc... 25 7.8
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 61.7 bits (143), Expect = 1e-10
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Frame = +1
Query: 205 LHAIPDEIKNLINLQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSIPESLNNMKEL 384
+ +I EI L+ L + N + F E++ L L++LD+SRN++K +PES + L
Sbjct: 64 IKSIGPEILKFTRLRYLNIRSNVLREFPESLCRLESLEILDISRNKIKQLPESFGALMNL 123
Query: 385 TSINFSSNQIEDMPK-IGDLPNLIIIDISNNKL 480
++ S N++ ++P I +PNL I+ I NN +
Sbjct: 124 KVLSISKNRLFELPTYIAHMPNLEILKIENNHI 156
Score = 36.3 bits (80), Expect = 0.004
Identities = 26/105 (24%), Positives = 51/105 (48%)
Frame = +1
Query: 379 ELTSINFSSNQIEDMPKIGDLPNLIIIDISNNKLKSFLDVESANLPHLTDLKLKSNLIES 558
+L+ +N E + +I + + + +N +KS + E L L ++SN++
Sbjct: 33 DLSHLNLRELPYEQLERIQG--RIARLALGHNFIKS-IGPEILKFTRLRYLNIRSNVLRE 89
Query: 559 IPSCIGQKLSSLKNFDISDNQITVVPGEVANISKIKDLNLKGNKL 693
P + +L SL+ DIS N+I +P + +K L++ N+L
Sbjct: 90 FPESLC-RLESLEILDISRNKIKQLPESFGALMNLKVLSISKNRL 133
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 51.6 bits (118), Expect = 1e-07
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Frame = +1
Query: 310 KLKVLDLSRNELKSIPESLNNMKELTSINFSSNQIEDMPKI---GDLPN-LIIIDISNNK 477
KLK LD+S N + + +++L +N S N I ++ + G N L ++I+NNK
Sbjct: 454 KLKRLDISNNLRSPRGKPITALRQLEVLNMSRNDIYELDPLIFSGLSRNSLKELNIANNK 513
Query: 478 LKSFLDVESANLPHLTDLKLKSNLIESIPSCIGQKLSSLKNFDISDNQITVVPGEVANIS 657
L FL + L +LT L L N + P I +LS L+ + S N ++ + ++ ++
Sbjct: 514 L-FFLPHSTRYLVNLTYLDLSYNNFVTFPLII-TELSQLETLNFSHNLLSQISSKIGSLV 571
Query: 658 KIKDLNLKGNKLS 696
K+K L L+ N LS
Sbjct: 572 KLKHLYLQFNDLS 584
Score = 48.8 bits (111), Expect = 7e-07
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 10/172 (5%)
Frame = +1
Query: 211 AIPDEIKNLINLQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSIPESLNNMKELTS 390
+I D I + NL+ L ++ + N+ L+ L LDL N +K PE + + L
Sbjct: 697 SISDAISAMQNLKYLSCTNCEMSYVSPNLGKLKHLVHLDLHANNIKIFPEEVWQVSSLKV 756
Query: 391 INFSSNQIEDMP-KIGDLPNL--------IIIDISNNKLKSFLDVESANLPHLTDLKLKS 543
+N SSN +E + + L I+ +S N + S L + +P + +L L
Sbjct: 757 VNLSSNILEKIKLPVATSKKLTRTISQLKIMRTLSGNPVSS-LSSQEFVMPTVEELYLVD 815
Query: 544 NLIESIPSCIGQKLSSLKNFDISDNQITVVPGE-VANISKIKDLNLKGNKLS 696
N + + + LK ++S N +T +P + N S +K L + GN+L+
Sbjct: 816 NRLGNDCFTALEYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELA 867
Score = 46.0 bits (104), Expect = 5e-06
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +1
Query: 241 NLQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSIPESLNNMKELTSINFSSNQIED 420
+L+ L + NK+ + L L LDLS N + P + + +L ++NFS N +
Sbjct: 503 SLKELNIANNKLFFLPHSTRYLVNLTYLDLSYNNFVTFPLIITELSQLETLNFSHNLLSQ 562
Query: 421 M-PKIGDLPNLIIIDISNNKLKSFLDVESANLPHLTDLKLKSNLIESIPS 567
+ KIG L L + + N L + L E L +L + L N I +I S
Sbjct: 563 ISSKIGSLVKLKHLYLQFNDLSNRLPQEIGLLKNLETIDLSYNAITNIAS 612
Score = 41.9 bits (94), Expect = 8e-05
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 226 IKNLINLQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKS-IPESLNNMKELTSINFS 402
I L L++L N + + I +L KLK L L N+L + +P+ + +K L +I+ S
Sbjct: 544 ITELSQLETLNFSHNLLSQISSKIGSLVKLKHLYLQFNDLSNRLPQEIGLLKNLETIDLS 603
Query: 403 SNQIEDMPKIGDLPNLIIIDISNNKLKSF 489
N I ++ + + P L I+++ N L +
Sbjct: 604 YNAITNIASLSECPKLNSINVACNLLSFY 632
Score = 37.9 bits (84), Expect = 0.001
Identities = 39/160 (24%), Positives = 72/160 (45%)
Frame = +1
Query: 214 IPDEIKNLINLQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSIPESLNNMKELTSI 393
+P EI L NL+++ + N I +++ KL ++++ N L S E N T I
Sbjct: 587 LPQEIGLLKNLETIDLSYNAITNI-ASLSECPKLNSINVACN-LLSFYEYSN--PSATFI 642
Query: 394 NFSSNQIEDMPKIGDLPNLIIIDISNNKLKSFLDVESANLPHLTDLKLKSNLIESIPSCI 573
+FS + + NL+ DIS+ KL D L ++ +K+ N SI I
Sbjct: 643 DFSFCPLTTIDPAFSYSNLVYFDISHAKLIGLKDSVIETLVNVETVKVNYNHFTSISDAI 702
Query: 574 GQKLSSLKNFDISDNQITVVPGEVANISKIKDLNLKGNKL 693
+ +LK ++ +++ V + + + L+L N +
Sbjct: 703 -SAMQNLKYLSCTNCEMSYVSPNLGKLKHLVHLDLHANNI 741
Score = 32.3 bits (70), Expect = 0.068
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 256 LMFGNKIEVFNENITTLRKLKVLDLSRNELKSIPESLNNMKELTSINFSSNQIEDMPKIG 435
L + E+ ++ LK L +S NEL ++ S L ++ + N++ PK
Sbjct: 837 LSYNYLTEIPSKFFQNFSDLKHLFVSGNELANLSISSTAQVLLETLYANGNRLSSFPKNE 896
Query: 436 DL-PNLIIIDISNNKLKSFLDVESANLPHLTDL 531
L +L +DIS N L++ L VE A LT L
Sbjct: 897 ALSKSLRFLDISTNNLQN-LAVEKAEKKSLTKL 928
Score = 32.3 bits (70), Expect = 0.068
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Frame = +1
Query: 244 LQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSI------PESLNNMKELTSINFSS 405
L++L GN++ F +N + L+ LD+S N L+++ +SL + +L +N S
Sbjct: 879 LETLYANGNRLSSFPKNEALSKSLRFLDISTNNLQNLAVEKAEKKSLTKLPQLEYLNLSG 938
Query: 406 N 408
N
Sbjct: 939 N 939
Score = 26.2 bits (55), Expect = 4.5
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 457 IDISNNKLKSFLDVESANLPH-LTDLKLKSNLIESIPSCIGQKLSSLKNFDISDNQITVV 633
+DIS + L+ + V+ H L L + NL +P ++ LK DIS+N +
Sbjct: 410 LDISRSNLE-VIPVKIYPYAHELISLNVSHNLSLDLPLDFMERCVKLKRLDISNNLRSPR 468
Query: 634 PGEVANISKIKDLNLKGNKL 693
+ + +++ LN+ N +
Sbjct: 469 GKPITALRQLEVLNMSRNDI 488
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 49.2 bits (112), Expect = 6e-07
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Frame = +1
Query: 271 KIEVFNENI-TTLRKLKVLDLSRNELKSIPESLNNMKELTSINFSSNQIEDMPKIG--DL 441
K++ +N+ +L+ L LDLS NEL IP +L + +L S+N +SN+I L
Sbjct: 343 KLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKITGCRTFYHISL 402
Query: 442 PNLIIIDISNNKLKSFLDVESANLPHLTDLKLKSNLIESI 561
+L I+ +S N L S +E N+P L L ++ N I +
Sbjct: 403 SHLQILVLSRNHLTSLSGLE--NVPSLEKLDIRDNSITDV 440
Score = 40.7 bits (91), Expect = 2e-04
Identities = 20/67 (29%), Positives = 38/67 (56%)
Frame = +1
Query: 496 VESANLPHLTDLKLKSNLIESIPSCIGQKLSSLKNFDISDNQITVVPGEVANISKIKDLN 675
+ S++ L L+ S ++SIP + L SL + D+S N++T +P + + ++ LN
Sbjct: 326 LSSSSWSQLLYLRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLN 385
Query: 676 LKGNKLS 696
L NK++
Sbjct: 386 LASNKIT 392
Score = 28.7 bits (61), Expect = 0.84
Identities = 22/99 (22%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +1
Query: 205 LHAIPDEI-KNLINLQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSIPESLN-NMK 378
L +IP + +L +L SL + GN++ + L +L L+L+ N++ + ++
Sbjct: 344 LKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKITGCRTFYHISLS 403
Query: 379 ELTSINFSSNQIEDMPKIGDLPNLIIIDISNNKLKSFLD 495
L + S N + + + ++P+L +DI +N + ++
Sbjct: 404 HLQILVLSRNHLTSLSGLENVPSLEKLDIRDNSITDVVE 442
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 48.8 bits (111), Expect = 7e-07
Identities = 37/128 (28%), Positives = 67/128 (52%)
Frame = +1
Query: 244 LQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSIPESLNNMKELTSINFSSNQIEDM 423
L L ++ N I V EN+ ++ L LDLS N +K+I ++N++K L ++ F N+I +
Sbjct: 84 LTELDLYDNLI-VRIENLDNVKNLTYLDLSFNNIKTI-RNINHLKGLENLFFVQNRIRRI 141
Query: 424 PKIGDLPNLIIIDISNNKLKSFLDVESANLPHLTDLKLKSNLIESIPSCIGQKLSSLKNF 603
+ L L +++ NK++ ++++ L +L L + N I + +KL L
Sbjct: 142 ENLEGLDRLTNLELGGNKIRVIENLDT--LVNLEKLWVGKNKITKFENF--EKLQKLSLL 197
Query: 604 DISDNQIT 627
I N+IT
Sbjct: 198 SIQSNRIT 205
Score = 41.1 bits (92), Expect = 1e-04
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +1
Query: 220 DEIKNLINLQSLLMFGNKIEVFNENITTLRK-LKVLDLSRNELKSIPESLNNMKELTSIN 396
+ + L L L + N+I F EN+ L L+ L +S N L S + ++ L ++
Sbjct: 186 ENFEKLQKLSLLSIQSNRITQF-ENLACLSHCLRELYVSHNGLTSF-SGIEVLENLEILD 243
Query: 397 FSSNQIEDMPKIGDLPNLIIIDISNNKLKSFLDVE 501
S+N I+ + + L NL+ + SNN+L SF ++E
Sbjct: 244 VSNNMIKHLSYLAGLKNLVELWASNNELSSFQEIE 278
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 48.8 bits (111), Expect = 7e-07
Identities = 30/112 (26%), Positives = 58/112 (51%)
Frame = +1
Query: 226 IKNLINLQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSIPESLNNMKELTSINFSS 405
+ +LI+L+ L + N + + I L L L N +K + + +N+ L + +
Sbjct: 686 LSSLIHLRELKVDSNHLWSL-DGIQHLDGLLKLSACNNRIKELSFTNSNLHRLEELLLGN 744
Query: 406 NQIEDMPKIGDLPNLIIIDISNNKLKSFLDVESANLPHLTDLKLKSNLIESI 561
N+IE++ +I L NL+++ + NNKL + S + HL L++ +N I +
Sbjct: 745 NEIEEIEEISSLQNLMVLQLDNNKLTNL--KASQPMIHLRILRISNNAIHQL 794
Score = 48.4 bits (110), Expect = 1e-06
Identities = 39/152 (25%), Positives = 76/152 (50%)
Frame = +1
Query: 241 NLQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSIPESLNNMKELTSINFSSNQIED 420
+++ L + GN+I T+R L ++ N L S+ S +N+ L ++ S NQ+ED
Sbjct: 627 SIEELTLEGNEIAYLTGCPVTIRDLNAVE---NRLSSLT-SFSNLLNLQYLDISYNQLED 682
Query: 421 MPKIGDLPNLIIIDISNNKLKSFLDVESANLPHLTDLKLKSNLIESIPSCIGQKLSSLKN 600
+ + L +L + + +N L S ++ +L L L +N I+ + S L L+
Sbjct: 683 LTGLSSLIHLRELKVDSNHLWSLDGIQ--HLDGLLKLSACNNRIKEL-SFTNSNLHRLEE 739
Query: 601 FDISDNQITVVPGEVANISKIKDLNLKGNKLS 696
+ +N+I + E++++ + L L NKL+
Sbjct: 740 LLLGNNEIEEIE-EISSLQNLMVLQLDNNKLT 770
Score = 45.6 bits (103), Expect = 7e-06
Identities = 35/128 (27%), Positives = 65/128 (50%)
Frame = +1
Query: 220 DEIKNLINLQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSIPESLNNMKELTSINF 399
D I++L L L N+I+ + + L +L+ L L NE++ I E +++++ L +
Sbjct: 706 DGIQHLDGLLKLSACNNRIKELSFTNSNLHRLEELLLGNNEIEEI-EEISSLQNLMVLQL 764
Query: 400 SSNQIEDMPKIGDLPNLIIIDISNNKLKSFLDVESANLPHLTDLKLKSNLIESIPSCIGQ 579
+N++ ++ + +L I+ ISNN + L+V+ PHL L + N P +
Sbjct: 765 DNNKLTNLKASQPMIHLRILRISNNAIHQ-LEVD--QFPHLRTLYMDLNRFNRPPDI--R 819
Query: 580 KLSSLKNF 603
+L L NF
Sbjct: 820 RLKRLVNF 827
Score = 29.5 bits (63), Expect = 0.48
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Frame = +1
Query: 217 PDEIKNLINLQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSIPESLNNMKELTSIN 396
P +I+ L L + E N I ++ L LS N ++ + + + +
Sbjct: 815 PPDIRRLKRLVNFSFRTQDPEASNFVIQPSLDIRNLYLSNNTFVTL-DCKHMFLGVRYLE 873
Query: 397 FSSNQIEDMPKI--GDLPNLIIIDISNNKLKSFLDVESAN-LPHLTDLKLKSNLIESIPS 567
++ Q++++PK +PNL ++D+S+N + D+ES L + L L N I+ + +
Sbjct: 874 LANVQLKEVPKYIATSMPNLRVLDLSHNYIS---DIESLKPLQMIHRLYLVGNRIKKMRN 930
Query: 568 CIGQKLSSLKNFDISD 615
+ L++LK ++ D
Sbjct: 931 -LCDILANLKQLNVLD 945
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 42.3 bits (95), Expect = 6e-05
Identities = 26/77 (33%), Positives = 43/77 (55%)
Frame = +1
Query: 463 ISNNKLKSFLDVESANLPHLTDLKLKSNLIESIPSCIGQKLSSLKNFDISDNQITVVPGE 642
I++N L L E L +L L N I++IP +G L+ L+ + DN I+V+P E
Sbjct: 188 INHNNLTR-LPPEIGKLKNLVILDASGNSIKTIPPELGL-LTELREVLLFDNMISVIPAE 245
Query: 643 VANISKIKDLNLKGNKL 693
+ + ++K L ++GN L
Sbjct: 246 LGTLFQLKILGIEGNPL 262
Score = 41.9 bits (94), Expect = 8e-05
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Frame = +1
Query: 244 LQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSIPESLNNMKELTSINFSSNQIEDM 423
L L + N + I L+ L +LD S N +K+IP L + EL + N I +
Sbjct: 183 LTELYINHNNLTRLPPEIGKLKNLVILDASGNSIKTIPPELGLLTELREVLLFDNMISVI 242
Query: 424 P-KIGDLPNLIIIDISNNKLKSFLD---VESANLPHLTDLKLKSNLIESIPSCIGQKLSS 591
P ++G L L I+ I N L+ +ES + L+ + P +KL S
Sbjct: 243 PAELGTLFQLKILGIEGNPLQDVYKNQIMESGTAGLIAALRDGCPVGPPPPERGWEKLVS 302
Query: 592 LKNFDISDNQITVV 633
+ D++DN T V
Sbjct: 303 DDDDDVNDNVSTSV 316
Score = 36.3 bits (80), Expect = 0.004
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 193 SDTCLHAIPDEIKNLINLQSLLMFGNKIEVFNENITTLRKLKVLDLSRNELKSI 354
S + IP E+ L L+ +L+F N I V + TL +LK+L + N L+ +
Sbjct: 212 SGNSIKTIPPELGLLTELREVLLFDNMISVIPAELGTLFQLKILGIEGNPLQDV 265
>SPBC336.08 |spc24||spindle pole body protein
Spc24|Schizosaccharomyces pombe|chr 2|||Manual
Length = 198
Score = 29.1 bits (62), Expect = 0.64
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 277 EVFNENITTLRKLKVLDLSRNELKSIPESLNNMKE-LTSINFSSNQIEDMPKIGDLPNLI 453
E+ + R K+L+++ NE+ S+ L MKE L + N ED+ + + N++
Sbjct: 79 EILSREKEKFRIAKLLNITENEIMSLESQLQKMKEQLLQLEERENTSEDICQSEENANML 138
>SPAC8F11.07c |cdc24||DNA replication protein
Cdc24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 501
Score = 27.1 bits (57), Expect = 2.6
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Frame = +1
Query: 364 LNNMKELTSINFSSNQIEDMPK--IGDLPNLIIIDISNNKLKSFLDVESANLPHLTDLK- 534
L+N + I +S++Q IGDL + I+ S++ L + V L++L+
Sbjct: 303 LDNNGQRVKILYSNSQKHYFKDTYIGDLLCISPINHSSDNLSDYSCVSDTTTEILSNLEN 362
Query: 535 -LKSNLIESIPSCIGQKLSSLKNFDISDNQIT-VVPGEVANISKIKDLN 675
L SN + + C L S + + +T V+ G VAN+++ DLN
Sbjct: 363 PLSSNFLRN-DLCKFSNLFSGVSGHLKIQPLTLVITGFVANLTRQSDLN 410
>SPAP8A3.10 |||mitochondrial intermembrane space protein sorting
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 171
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 277 EVFNENITTLRKLKVLDLSRNELKSIPESLNNMKELTSINFS 402
++ N N + + + V+D S+ ELKS +L+++K L I +S
Sbjct: 68 DLLNVNKSYILERSVIDPSKQELKSETFNLDHVKILRVIEYS 109
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 138 FRDSFRYSGSRQLNFVTILLFCGHNFRPSTHF 43
FRD + SG + LLF H+++PS F
Sbjct: 1126 FRDMDQLSGGEKTMAALALLFAIHSYQPSPFF 1157
>SPAC6F12.08c |||exocyst complex subunit Exo84|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 26.2 bits (55), Expect = 4.5
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +1
Query: 205 LHAIPDEIKNLINLQSLLMFGNKIEVFNENITTL---RKLKVLDLSRNELKSIPESLNNM 375
L D I+NL +Q+ L GN E+F E RK KV ++ ++L SL++
Sbjct: 378 LQEFTDAIRNLALIQNKLERGNLNELFAEFFADKLHNRKRKVTEILLHQLGFKGISLSHG 437
Query: 376 KEL 384
KE+
Sbjct: 438 KEI 440
>SPAC3H8.10 |spo20|sec14|sec14 cytosolic factor family
Sec14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 286
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 472 NKLKSFLDVESANLPHLTDLKLKSNLIESIPS 567
N +K FLD + H+ KS L+E IP+
Sbjct: 221 NLIKGFLDEATVKKIHILGSNYKSALLEQIPA 252
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 61 EVVTAKEENRHEIKLAGAAISKRISEH 141
E VTA E H+ SKR+S+H
Sbjct: 448 EAVTAPTETAHDFSKETTTASKRVSKH 474
>SPBC1861.08c |||U2 snRNP-associated protein Lea1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 239
Score = 25.8 bits (54), Expect = 5.9
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 322 LDLSRNELKSIPESLNNMKEL-TSINFSSNQIEDMPKIGDLPNLIIIDISNNKLKSFLDV 498
LDL ++ I E+L ++++ +I+F+ N I + + L + NN++ +
Sbjct: 23 LDLRWYQIPII-ENLGVLRDVHDAIDFTDNDIRYLGNFPRMKRLQTLLCGNNRITAIAPD 81
Query: 499 ESANLPHLTDLKLKSNLIESI 561
LP+L L L N ++ I
Sbjct: 82 IGKVLPNLKTLSLAQNHLQEI 102
>SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subunit
Rpc82 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 591
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 313 LKVLDLSRNELKSIPESLNNMKELTSINFSSNQIEDMPKIGDLPNL 450
L ++L+RN I + + + S+N +SN++ M K+ +L L
Sbjct: 320 LTTMELTRNFPNDIDVESSIVDKQYSVNSASNELRVMEKLNELDEL 365
>SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 312 LSKCGYVFIKNFNLISEH*QALEIN*VLDLIWYSVQTCITDV 187
+S C Y+ NF+L S++ + E L L WY T TD+
Sbjct: 249 ISTCLYLDNSNFDLYSQNLERSEQAYSLRLHWYGKLTPKTDI 290
>SPAC13A11.06 ||SPAC3H8.01|pyruvate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 571
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 304 LRKL-KVLDLSRNELKSIPESLNNMKELTSINFSSNQI 414
LRKL KVLD S K+ P N+K + +SSN+I
Sbjct: 333 LRKLLKVLDASMCHSKAAPTIGYNIKPKHAEGYSSNEI 370
>SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 882
Score = 25.4 bits (53), Expect = 7.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 246 EIN*VLDLIWYSVQTCITDVQ*VYVC*GEDIFV 148
EIN + D I YS +C+ + YV GED F+
Sbjct: 392 EINQIFDAISYSKGSCVIRMVSKYV--GEDTFI 422
>SPAC4G9.10 |arg3||ornithine carbamoyltransferase
Arg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 327
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +1
Query: 313 LKVLDLSRNELKSIPESLNNMKELTSINFSSNQIEDMPKIGDLPNLIIIDISNNKLKSFL 492
L + DLSR E+ + + + +K+ NF + + M + N+ +I S ++ +
Sbjct: 11 LSIRDLSRGEIVKLIDRSSEIKQAYKQNFQNRRSVQMSGLSS-QNVAMI-FSKRSTRTRV 68
Query: 493 DVESA 507
VESA
Sbjct: 69 SVESA 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,639,337
Number of Sequences: 5004
Number of extensions: 51527
Number of successful extensions: 198
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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