BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0933 (618 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 23 2.7 DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 3.6 AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 22 3.6 EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 22 4.7 EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 22 4.7 >AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. Length = 301 Score = 22.6 bits (46), Expect = 2.7 Identities = 9/27 (33%), Positives = 15/27 (55%) Frame = -2 Query: 191 RTEDLSERSGADRVHGAGLQVDENGAG 111 + DLS R+G+ H L + ++G G Sbjct: 196 KARDLSPRNGSPTDHSPVLNLSKSGGG 222 >DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein. Length = 2700 Score = 22.2 bits (45), Expect = 3.6 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +1 Query: 517 QTKPTASTTRLYTTSASAL 573 QTK T STT TT+ S L Sbjct: 1184 QTKTTTSTTTRPTTTVSQL 1202 >AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B protein. Length = 351 Score = 22.2 bits (45), Expect = 3.6 Identities = 15/49 (30%), Positives = 17/49 (34%) Frame = +1 Query: 19 STPPVPTMGTLTCSWSASMYTTMKPPAASTCPAPFSSTWSPAPWTLSAP 165 S PP P S S PP A+T +S S A L P Sbjct: 10 SPPPAPQSAATPISSSGMTSPAAAPPPATTSSGSPASVASNASAPLHIP 58 >EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering hormone receptorisoform B protein. Length = 451 Score = 21.8 bits (44), Expect = 4.7 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = +1 Query: 520 TKPTASTTRLYTTSASALSNCP 585 +K + STT TT++SAL++ P Sbjct: 4 SKFSPSTTTTTTTTSSALNSTP 25 >EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering hormone receptorisoform A protein. Length = 434 Score = 21.8 bits (44), Expect = 4.7 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = +1 Query: 520 TKPTASTTRLYTTSASALSNCP 585 +K + STT TT++SAL++ P Sbjct: 4 SKFSPSTTTTTTTTSSALNSTP 25 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 152,694 Number of Sequences: 336 Number of extensions: 3558 Number of successful extensions: 9 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 122,585 effective HSP length: 54 effective length of database: 104,441 effective search space used: 15770591 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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