Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0931
         (585 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           32   0.016
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    27   0.34 
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    26   0.78 
DQ370044-1|ABD18605.1|   99|Anopheles gambiae putative salivary ...    24   4.2  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   5.5  
DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.        23   5.5  
AY062205-1|AAL58566.1|  154|Anopheles gambiae cytochrome P450 CY...    23   5.5  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   7.3  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   7.3  
DQ182014-1|ABA56306.1|   55|Anopheles gambiae G(alpha)m protein.       23   9.6  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 31.9 bits (69), Expect = 0.016
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 385 MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 498
           +RT   LRGH + +  + W    + L S    G + VW
Sbjct: 54  LRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGIIFVW 91


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 27.5 bits (58), Expect = 0.34
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = -1

Query: 525 VHLVGRVAVPHDQLTILTGRHQVPGIAAPVHGVDLREMTAQGSSGAHLYATD 370
           V   GR +    ++ +L      P  + PV+ +D+ E    G+    L ATD
Sbjct: 489 VESAGRTSTAQIRVVVLDQNDNFPEFSQPVYDIDVPENVIAGTVLLQLQATD 540


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 26.2 bits (55), Expect = 0.78
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 404 CAVISRRSTPCTGAAIPGTWCRP 472
           CA ++    PCT   I G +C+P
Sbjct: 52  CADLNELQKPCTKQCIQGCFCKP 74


>DQ370044-1|ABD18605.1|   99|Anopheles gambiae putative salivary
           secreted peptide withTIL domain protein.
          Length = 99

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 434 CTGAAIPGTWCRP 472
           CTG  + G +CRP
Sbjct: 52  CTGVCVSGCFCRP 64


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 136 RRSKGHC*QKDRCVACCTCAAR 201
           RRS  HC Q+ R  +C   AA+
Sbjct: 38  RRSSAHCTQQTRQASCSDNAAQ 59


>DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.
          Length = 482

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 276 PGGGNP*KRY*RCEKSGMRHVAGPGHLE 359
           PG GN  K Y R  K   R + G G L+
Sbjct: 116 PGSGNIPKNYARLLKEFTRDIGGKGILK 143


>AY062205-1|AAL58566.1|  154|Anopheles gambiae cytochrome P450
           CYP4C26 protein.
          Length = 154

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = +3

Query: 144 EGTLLTEGSVRCVLYVRGARLSIVCST*AVCDACINHERAGQPTPGGGNP*KRY*RCEKS 323
           EG   T  ++  +LY+ GA   I        DA +  +R  +PT    N  +    C K 
Sbjct: 8   EGHDTTAAAMAWILYLLGAAPDIQERVIQEIDAVMGTDRDRRPTMAELNEMRYLECCIKE 67

Query: 324 GMR 332
           G+R
Sbjct: 68  GLR 70


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 123 KIAGASIEGTLLTEGSVRCVLYVRGARLSIVC 218
           K+A     G +  E + RC+  VRGA+ +  C
Sbjct: 451 KMADMYSVGLVFWEMARRCITTVRGAKNTTTC 482


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 424 IYAMHWGSDSRNLVSASQDGKLIVWDSHT 510
           I+ + W S S++LVS + D     WD +T
Sbjct: 15  IFGVFWASLSKSLVSQAPDE--CRWDGYT 41


>DQ182014-1|ABA56306.1|   55|Anopheles gambiae G(alpha)m protein.
          Length = 55

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -1

Query: 522 HLVGRVAVPHDQLTILTGRHQVPGIAAPVHGVDL 421
           HLVGR    +   TI T    V  +   VH + L
Sbjct: 16  HLVGRKRTCYFHFTIATDTQNVRTVLNDVHNIIL 49


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,234
Number of Sequences: 2352
Number of extensions: 13650
Number of successful extensions: 25
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)