Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0928
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.9  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 120  FKNKCRAAREPVAQTV 73
            FKN+C   R P+  T+
Sbjct: 1745 FKNRCGEGRHPLLTTI 1760


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = -1

Query: 690 WRISRGLMLWLQN*KQSSQFRRC 622
           W ++ G+ +WL       QF  C
Sbjct: 403 WSVNAGMWMWLSCSSFFQQFFHC 425


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 105 YIYS*INKHHYFILSINY 158
           Y Y  I +H Y ++S++Y
Sbjct: 21  YCYKTIKQHIYSLISLSY 38


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/53 (20%), Positives = 24/53 (45%)
 Frame = +3

Query: 78  SVRPALSLPYIYS*INKHHYFILSINYFSHDKS*RRQ*IFFLYFFLNFVSLLL 236
           ++      P I   + + +  + S  Y  ++    +  ++   FF+ +VSLLL
Sbjct: 248 AINMLFGFPIIIGCLIQFNTIVFSFCYCYYNSKMTKDGVYNTLFFIVYVSLLL 300


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 105 YIYS*INKHHYFILSINY 158
           Y Y  I +H Y ++S++Y
Sbjct: 21  YCYKTIKQHIYSLISLSY 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,035
Number of Sequences: 336
Number of extensions: 2464
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)