Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0927
         (434 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.2  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   2.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   2.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   2.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   5.1  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   5.1  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   5.1  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    20   8.9  

>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 7/30 (23%)
 Frame = +2

Query: 359 TGHIARNCPEGGR-------ESATQTCYNC 427
           +G +  NCP GG+       E+A + C +C
Sbjct: 19  SGCLITNCPRGGKRSKFAISENAVKPCVSC 48


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 189  ESRDTTPPCVHSRAKCPVRLH 127
            E R+  PP VHS    P   H
Sbjct: 1790 EEREEAPPSVHSSTVVPPPQH 1810


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 354 TRRATSHGTVPR 389
           TRRA+S G +PR
Sbjct: 268 TRRASSRGIIPR 279


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 337 VMLQLQQDGP 366
           VMLQ+ QDGP
Sbjct: 964 VMLQISQDGP 973


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 337 VMLQLQQDGP 366
           VMLQ+ QDGP
Sbjct: 964 VMLQISQDGP 973


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +2

Query: 305 ARECAQSPDEPSCYNCNKTGHIARNCPEGGRESAT 409
           A E        SC   N +  ++ NC   GR + T
Sbjct: 227 ALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFT 261


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +2

Query: 305 ARECAQSPDEPSCYNCNKTGHIARNCPEGGRESAT 409
           A E        SC   N +  ++ NC   GR + T
Sbjct: 16  ALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFT 50


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +2

Query: 305 ARECAQSPDEPSCYNCNKTGHIARNCPEGGRESAT 409
           A E        SC   N +  ++ NC   GR + T
Sbjct: 16  ALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFT 50


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 354 TRRATSHGTVPR 389
           +RRA+S G +PR
Sbjct: 233 SRRASSRGLIPR 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,437
Number of Sequences: 336
Number of extensions: 2060
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)