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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0925
         (333 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   4.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   4.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   4.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    20   5.9  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 49  KKRRRVTGSIFKMKV 93
           +KRR V  SIFK++V
Sbjct: 79  EKRREVYESIFKVEV 93


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 49  KKRRRVTGSIFKMKV 93
           +KRR V  SIFK++V
Sbjct: 239 EKRREVYESIFKVEV 253


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 49  KKRRRVTGSIFKMKV 93
           +KRR V  SIFK++V
Sbjct: 239 EKRREVYESIFKVEV 253


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 90  LHLKYGSCDATPLFKTLTQ 34
           + L+Y   D  P+F +LTQ
Sbjct: 198 VELEYLKTDLIPMFLSLTQ 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,359
Number of Sequences: 336
Number of extensions: 862
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)

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