Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0924
(690 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16Q48 Cluster: Putative uncharacterized protein; n=1; ... 136 6e-31
UniRef50_Q4SJG6 Cluster: Chromosome 4 SCAF14575, whole genome sh... 36 0.93
UniRef50_A3CW83 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding ... 36 1.2
UniRef50_Q4X042 Cluster: Putative uncharacterized protein; n=2; ... 35 1.6
UniRef50_Q54WY7 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_P34250 Cluster: Uncharacterized protein YKL105C; n=2; S... 34 2.9
UniRef50_Q94290 Cluster: Putative uncharacterized protein M02E1.... 34 3.8
UniRef50_A0APF1 Cluster: CG3975 protein; n=12; Sophophora|Rep: C... 34 3.8
UniRef50_Q754G7 Cluster: AFR103Wp; n=1; Eremothecium gossypii|Re... 34 3.8
UniRef50_A6GFV5 Cluster: Aldehyde oxidase and xanthine dehydroge... 33 5.0
UniRef50_Q259T6 Cluster: H0913C04.8 protein; n=3; Oryza sativa|R... 33 5.0
UniRef50_A2QAX3 Cluster: Contig An01c0390, complete genome; n=2;... 33 5.0
UniRef50_UPI000023E7EC Cluster: hypothetical protein FG06424.1; ... 33 6.6
UniRef50_A0YY54 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_Q5DGS1 Cluster: SJCHGC06573 protein; n=1; Schistosoma j... 33 6.6
UniRef50_Q2H5K2 Cluster: Predicted protein; n=1; Chaetomium glob... 33 6.6
UniRef50_UPI00015B959F Cluster: UPI00015B959F related cluster; n... 33 8.7
UniRef50_UPI00015B5013 Cluster: PREDICTED: similar to fetal alzh... 33 8.7
UniRef50_Q7UPJ4 Cluster: Putative uncharacterized protein; n=2; ... 33 8.7
UniRef50_Q1IWS1 Cluster: AFG1-like protein ATPase; n=2; Deinococ... 33 8.7
UniRef50_Q6K624 Cluster: BRI1-KD interacting protein 135; n=4; O... 33 8.7
UniRef50_Q5CRA9 Cluster: Cyclin domain protein; n=2; Cryptospori... 33 8.7
UniRef50_Q4PG42 Cluster: Putative uncharacterized protein; n=1; ... 33 8.7
UniRef50_Q45W61 Cluster: Polyprotein; n=1; Phanerochaete chrysos... 33 8.7
UniRef50_A4QQM5 Cluster: Putative uncharacterized protein; n=2; ... 33 8.7
UniRef50_Q9NVW2 Cluster: RING finger protein 12; n=26; Amniota|R... 33 8.7
>UniRef50_Q16Q48 Cluster: Putative uncharacterized protein; n=1; Aedes
aegypti|Rep: Putative uncharacterized protein - Aedes
aegypti (Yellowfever mosquito)
Length = 926
Score = 136 bits (328), Expect = 6e-31
Identities = 108/251 (43%), Positives = 134/251 (53%), Gaps = 32/251 (12%)
Frame = +1
Query: 7 MCYLSPFSMSARGERAXXXXXXXXXXXXXXXXXXXXRCGSSNPLCPSEMEDPGSGGGPSC 186
MCYLSPFSM RG+RA RCGSSNPLCPSEMEDPG+G G +
Sbjct: 454 MCYLSPFSMCTRGDRAPSESNLSSSGYSSMASPGPSRCGSSNPLCPSEMEDPGTGSGGTG 513
Query: 187 F-----------QRRRPLMKTNSSPAAS--------NDDSKERRRGRSDSETLSDDPLLE 309
F +R ++K ++ A + D E R RSDSETLSDDPLLE
Sbjct: 514 FPGLSSMMGANMRRHTSILKKHNEAAGGAGGTATGGSSDRHESFRLRSDSETLSDDPLLE 573
Query: 310 SNDEGIGT---DERVDDVPV-SAKEMEL-VG--LIET--LDVPQTTLCSPSGVTKCSIVK 462
SND+GIGT DE++++ + SAKE+EL +G LIE + QT + S S + SIV
Sbjct: 574 SNDDGIGTDHLDEKIEEGEIKSAKELELFIGKELIENGRNILNQTEVASMSQLQLPSIV- 632
Query: 463 CISVERGLDEKVCLRPPTLLSEGXXXXXXXXXXXXXXXXDKT-GLGRFSPQFYGR---QL 630
I E G D+ L P + SE D+T + RFSP FYG+ QL
Sbjct: 633 -IQSESGFDK---LSPVSSRSES-------------PLSDRTASMERFSPLFYGKKDQQL 675
Query: 631 PFTDSDGIYDF 663
PFTDSDG+YDF
Sbjct: 676 PFTDSDGLYDF 686
>UniRef50_Q4SJG6 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 4
SCAF14575, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 845
Score = 35.9 bits (79), Expect = 0.93
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 6/111 (5%)
Frame = +1
Query: 121 GSSNPLCPSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDP 300
GS NP E++ P S + M+T++ N++ K GR +T SD P
Sbjct: 29 GSENPSANEELDTPTSIAS-AMTSTNESSMETDTPHQTDNEEPKAV--GREAEQTPSDSP 85
Query: 301 LLESNDEGIGTDERVD-----DVPVSAKEME-LVGLIETLDVPQTTLCSPS 435
LE EG+ T D +P + E G E+ P + +PS
Sbjct: 86 SLEIQREGVQTSRTADLASTTGIPEAPASSEAAAGASESAPTPTVSTVNPS 136
>UniRef50_A3CW83 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding
domain protein; n=1; Methanoculleus marisnigri JR1|Rep:
4Fe-4S ferredoxin, iron-sulfur binding domain protein -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 482
Score = 35.5 bits (78), Expect = 1.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 118 CGSSNPLCPSEMEDPGSGGGPSCFQRR 198
CGS P CP+ + DPG+ G P R+
Sbjct: 43 CGSCTPYCPARINDPGANGDPGYLARK 69
>UniRef50_Q4X042 Cluster: Putative uncharacterized protein; n=2;
Trichocomaceae|Rep: Putative uncharacterized protein -
Aspergillus fumigatus (Sartorya fumigata)
Length = 1193
Score = 35.1 bits (77), Expect = 1.6
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 187 FQRRRPLMKTNSSPAASNDDSKERRRGRSDS--ETLSD-DPLLESNDEGIGTDERVD 348
F P+ + SSPAAS+D+ +E R R +SD +P LE+ G G D V+
Sbjct: 20 FPLSSPITEEISSPAASSDEDREMERSRPFEYLTNVSDKNPFLEAESTGTGRDRLVE 76
>UniRef50_Q54WY7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 727
Score = 34.3 bits (75), Expect = 2.9
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 157 DPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSE 282
D SG S ++R+R + S+ + SN +SKE RR R E
Sbjct: 153 DSSSGSDDSDYERKRKSSSSTSTSSTSNKESKEERRKRKKQE 194
>UniRef50_P34250 Cluster: Uncharacterized protein YKL105C; n=2;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YKL105C - Saccharomyces cerevisiae (Baker's yeast)
Length = 1132
Score = 34.3 bits (75), Expect = 2.9
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 205 LMKTNSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEGIGTDERVDD 351
+M N+ P DD ++ D + DD + DE + DE VDD
Sbjct: 584 VMDKNNGPNNDKDDDDDKDNDNDDDDDKDDDVNDDDKDENVDDDENVDD 632
>UniRef50_Q94290 Cluster: Putative uncharacterized protein M02E1.1;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein M02E1.1 - Caenorhabditis elegans
Length = 1077
Score = 33.9 bits (74), Expect = 3.8
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +1
Query: 127 SNPLCPSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDPLL 306
S P +E++ S GG S FQ + + A+S+DDSK + S+ L
Sbjct: 505 SLPSSTAELKKEDSPGGCSGFQNE--IQSSIKQNASSDDDSKTSKISTPRMHATSETNQL 562
Query: 307 ESNDEGIGTDERVD 348
S D + +DE+VD
Sbjct: 563 NSMDFTLNSDEKVD 576
>UniRef50_A0APF1 Cluster: CG3975 protein; n=12; Sophophora|Rep:
CG3975 protein - Drosophila melanogaster (Fruit fly)
Length = 431
Score = 33.9 bits (74), Expect = 3.8
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +1
Query: 193 RRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEGIGTDERVDDVPVSAKE 372
RR+ + N S SK RR SDSE P +++E I DE++D P +
Sbjct: 312 RRKVIESDNDSDQEKASSSKRRRI--SDSEDEEQPPKKSADEETIALDEKMDTEPANETY 369
Query: 373 MELVGLIETLDVP 411
++ G + T P
Sbjct: 370 LDGDGFVITQRKP 382
>UniRef50_Q754G7 Cluster: AFR103Wp; n=1; Eremothecium gossypii|Rep:
AFR103Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 744
Score = 33.9 bits (74), Expect = 3.8
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 232 ASNDDSKERR--RGRSDSETLSDDPLLES-NDEGIGTDERVDDVPVSAKEMELVGL 390
+S DD +ER D + L DD L+ES ND + D + DD SAKE + +
Sbjct: 388 SSQDDFRERNDNNDNDDDDELDDDNLVESENDATMEQDSQSDDDTESAKEFTVANV 443
>UniRef50_A6GFV5 Cluster: Aldehyde oxidase and xanthine
dehydrogenase, molybdopterin binding protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Aldehyde oxidase and
xanthine dehydrogenase, molybdopterin binding protein -
Plesiocystis pacifica SIR-1
Length = 816
Score = 33.5 bits (73), Expect = 5.0
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 6 HVLSKSLLHVSER*TSSVRIKPLVVGIQFNGESWTFEMRFQ*PPLSFRNGRP 161
H L + L V ER +++R+ +G F G+S F++ F L+ + GRP
Sbjct: 241 HYLHRELAKVLERPANTIRVIQPPLGGAFGGKSEPFDLEFCVAKLAMKTGRP 292
>UniRef50_Q259T6 Cluster: H0913C04.8 protein; n=3; Oryza sativa|Rep:
H0913C04.8 protein - Oryza sativa (Rice)
Length = 244
Score = 33.5 bits (73), Expect = 5.0
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +1
Query: 121 GSSNPLCP--SEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSE 282
G N C S S PSC Q R + +PA+++DD +RRR + + E
Sbjct: 16 GGGNDACSLSSSSSTASSWQWPSCTQARTLSFARHDAPASADDDDSKRRRQQEEEE 71
>UniRef50_A2QAX3 Cluster: Contig An01c0390, complete genome; n=2;
Eurotiomycetidae|Rep: Contig An01c0390, complete genome -
Aspergillus niger
Length = 2267
Score = 33.5 bits (73), Expect = 5.0
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Frame = +1
Query: 124 SSNPLCPSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDS----KERRRGRSDSETLS 291
SS+PL P +PG+ FQ PL DS + + G D+ +
Sbjct: 823 SSSPLSPLSPREPGTPRSTHGFQVASPLSPAGGESLEKFQDSPIAPEPPKPGADDNAEEA 882
Query: 292 DDPLLESNDEGIGTDERVDDVPVSAKEMELVGLIETLDVP 411
+P L + G E+ D V+A+E++ G+ +P
Sbjct: 883 AEPKLPEKERGC-EQEKTDGAEVNAEEVKEEGINPVRSLP 921
>UniRef50_UPI000023E7EC Cluster: hypothetical protein FG06424.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06424.1 - Gibberella zeae PH-1
Length = 444
Score = 33.1 bits (72), Expect = 6.6
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +1
Query: 127 SNPLCPSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDPLL 306
SN S D S P +R+R ++SS + S+D S SDS + SDD
Sbjct: 185 SNSDSSSSDSDSDSDKKPQAKKRKRA-SSSSSSSSGSSDSSDSSSDSSSDSSSDSDDESA 243
Query: 307 ESNDEGIGTDERVD 348
ES+ + +D D
Sbjct: 244 ESDSDSDSSDSSSD 257
>UniRef50_A0YY54 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 1422
Score = 33.1 bits (72), Expect = 6.6
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 214 TNSSPAASND---DSKERRRGRSDSETLSDDPLLESNDEGIGTDERVDDVPVSAKEME 378
T++S + ND D+ + D++T D+P + NDE I E ++D P + E E
Sbjct: 477 TDNSDSDDNDQDTDNSDSDDNDQDTDTDEDNPSNQPNDEEISIPETIEDTPTNPIENE 534
>UniRef50_Q5DGS1 Cluster: SJCHGC06573 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06573 protein - Schistosoma
japonicum (Blood fluke)
Length = 244
Score = 33.1 bits (72), Expect = 6.6
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 187 FQRRRPLMKTN-SSPAASNDDSKERRRGRSDSETLSDDPLLESNDEGIGTDERVDDVPVS 363
F+ RR KT+ +SPA ++ + + R +S ++S D + E DE ++ +
Sbjct: 64 FEERRSRDKTSLTSPARTSTGADSKSRSKSKGSSVSSDSIKEVGDETPEPPKKKRSSNLP 123
Query: 364 AKEMELVGLIETLDVPQTTLCSPSGVTKCSIVKCISVERG 483
A E+ G E VP+ K +VK RG
Sbjct: 124 ASTEEIAG--EVQSVPEEAKEFIDEEPKSKVVKATGKTRG 161
>UniRef50_Q2H5K2 Cluster: Predicted protein; n=1; Chaetomium
globosum|Rep: Predicted protein - Chaetomium globosum
(Soil fungus)
Length = 525
Score = 33.1 bits (72), Expect = 6.6
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 217 NSSPAASNDDSKERRRGRSDSETLSDDPLLES--NDEGIGTDERVDDVPVSAKEMELV 384
+SS S+DD E RG + S+D +LE ++EG DE + + E+E +
Sbjct: 436 DSSDGVSSDDEDEGSRGGTLENEASEDEVLEDELSEEGFWEDEEAEGIHPPISELEAI 493
>UniRef50_UPI00015B959F Cluster: UPI00015B959F related cluster; n=1;
unknown|Rep: UPI00015B959F UniRef100 entry - unknown
Length = 158
Score = 32.7 bits (71), Expect = 8.7
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 26 SPCQREVNELRPNQTSRRRDTVQWRVLDLRDAVPVTPFVLQKWK 157
SP R V+E P R + W +LDL +A V+P +++++
Sbjct: 62 SPAARPVSEFTPALARSARAMLSWSILDLAEAADVSPSSVKRFE 105
>UniRef50_UPI00015B5013 Cluster: PREDICTED: similar to fetal
alzheimer antigen, falz; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to fetal alzheimer antigen, falz -
Nasonia vitripennis
Length = 2670
Score = 32.7 bits (71), Expect = 8.7
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 271 SDSET-LSDDPLLESNDEGIGTDERVDDVPVSAKEMELVGLIETLDVPQTTLCS 429
SD++T + DDPLL+S DE + E D P S + L T P+ TL S
Sbjct: 152 SDNKTDIEDDPLLQSEDESSESIEEPD--PSSDSDFSLSSFSTTSGTPRRTLLS 203
>UniRef50_Q7UPJ4 Cluster: Putative uncharacterized protein; n=2;
Planctomycetaceae|Rep: Putative uncharacterized protein
- Rhodopirellula baltica
Length = 433
Score = 32.7 bits (71), Expect = 8.7
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 217 NSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEGIGTDERVDDVPVSAKEME 378
NSSPA + R+GRS + +++D D G G +R+D S +++E
Sbjct: 182 NSSPAEREKQADRVRQGRSIMDIVAEDAKSLQRDLGSGDRDRLDAYFTSVRQLE 235
>UniRef50_Q1IWS1 Cluster: AFG1-like protein ATPase; n=2;
Deinococcus|Rep: AFG1-like protein ATPase - Deinococcus
geothermalis (strain DSM 11300)
Length = 350
Score = 32.7 bits (71), Expect = 8.7
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 35 QREVNELRPNQTSRRRDTVQWRVLDLRDAVPVTPFVLQKWKTRVPEVGLLV 187
QR++ + +RR D +R A P+TP Q W+ R P+ L V
Sbjct: 199 QRQIQGIADRFETRRIDGPDYRQRGTTPAQPLTPSEFQTWQARQPDASLAV 249
>UniRef50_Q6K624 Cluster: BRI1-KD interacting protein 135; n=4;
Oryza sativa|Rep: BRI1-KD interacting protein 135 -
Oryza sativa subsp. japonica (Rice)
Length = 755
Score = 32.7 bits (71), Expect = 8.7
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 121 GSSNPLCPSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDP 300
GSS L E P SGGG +R RP +N +P ++ + + +G++ + ++ P
Sbjct: 574 GSSVQLKEGNAETPKSGGGDLPKKRGRPKGSSNGTPKSNISATSSKSKGKAARKDENETP 633
Query: 301 LLESN 315
+ S+
Sbjct: 634 KVGSD 638
>UniRef50_Q5CRA9 Cluster: Cyclin domain protein; n=2;
Cryptosporidium|Rep: Cyclin domain protein -
Cryptosporidium parvum Iowa II
Length = 648
Score = 32.7 bits (71), Expect = 8.7
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 175 GPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEGIGTDE-RVDD 351
GP CF++ R + N + A SN + K G + + L + + +E +G DE R D
Sbjct: 289 GPPCFEKNRLKDEANKALAISNGEDKLAIEGINPNIGLESN--YDKENEPLGNDEDRRKD 346
Query: 352 VPVSAKEME 378
P A+E E
Sbjct: 347 DPEDAQEEE 355
>UniRef50_Q4PG42 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 870
Score = 32.7 bits (71), Expect = 8.7
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +1
Query: 211 KTNSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEGIGTDERVDDVPVSAKEMELVGL 390
KT SP A DS SDS++ SD +D+ +D DDV ++
Sbjct: 167 KTQHSPVAQKADSDSSSPSSSDSDSDSDSNSDRHSDQESSSDSEQDDVESASPSTPKAST 226
Query: 391 IET 399
+ET
Sbjct: 227 LET 229
>UniRef50_Q45W61 Cluster: Polyprotein; n=1; Phanerochaete
chrysosporium RP-78|Rep: Polyprotein - Phanerochaete
chrysosporium RP-78
Length = 1580
Score = 32.7 bits (71), Expect = 8.7
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +1
Query: 160 PGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEGIGT 333
P SG P F +R+ L++ S+P+ D + + +T SDDP S G GT
Sbjct: 1414 PLSGLCPLYFAQRQSLLQAASAPSTPEDFERALASVVAPDDTTSDDPTASSPGVGRGT 1471
>UniRef50_A4QQM5 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 854
Score = 32.7 bits (71), Expect = 8.7
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 232 ASNDDSKERRRGRSDSETLSDDPLLESNDEGIGTDERVDDVPVSAKEMELVGLIETLDVP 411
+ + S E G++D + + E++ + DE+ ++P+SA E+ELV L + P
Sbjct: 773 SDDGSSTEEGAGKADKMDVDGERPAEADGSKMDVDEKAPELPLSAAEVELVRLANIILFP 832
>UniRef50_Q9NVW2 Cluster: RING finger protein 12; n=26; Amniota|Rep:
RING finger protein 12 - Homo sapiens (Human)
Length = 624
Score = 32.7 bits (71), Expect = 8.7
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 163 GSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEG 324
GSGGG S ++SS ++S+ S G SET SD L E ++EG
Sbjct: 448 GSGGGSSSGSSSSSSSSSSSSSSSSSSSSPSSSSGGESSETSSD--LFEGSNEG 499
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.314 0.135 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,337,383
Number of Sequences: 1657284
Number of extensions: 11488864
Number of successful extensions: 26852
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 25644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26776
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -