Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0924
(690 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16698| Best HMM Match : Y_phosphatase (HMM E-Value=0) 31 1.2
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_50029| Best HMM Match : TP2 (HMM E-Value=0.15) 31 1.2
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 30 1.5
SB_18221| Best HMM Match : HHH (HMM E-Value=0.65) 30 1.5
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 30 2.0
SB_9427| Best HMM Match : DUF1049 (HMM E-Value=1.6) 29 2.7
SB_50607| Best HMM Match : Vicilin_N (HMM E-Value=0.88) 29 3.6
SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11) 29 3.6
SB_25237| Best HMM Match : Phage_integrase (HMM E-Value=0.2) 29 3.6
SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_45314| Best HMM Match : GRP (HMM E-Value=4.8) 29 4.7
SB_21889| Best HMM Match : Mak16 (HMM E-Value=3.8) 28 6.2
SB_4468| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_48876| Best HMM Match : Vicilin_N (HMM E-Value=0.11) 28 6.2
SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_23780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_51487| Best HMM Match : wnt (HMM E-Value=1.1e-08) 28 8.2
SB_36835| Best HMM Match : AMP-binding (HMM E-Value=6.2e-13) 28 8.2
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_15954| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
>SB_16698| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 839
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
Frame = +1
Query: 250 KERRRGRSDSETLSDD-PLLESNDEGIGTDERVDDVPVSAKEMELVGLIETLDVPQTTLC 426
+ RRR R +E + + SND GIG E +D+VP G E + +
Sbjct: 84 RNRRRKRDSTELKGNRYGVANSNDSGIGEKESLDNVPGVKYMQGRRGSEEVIGPGKFVTV 143
Query: 427 SPSGVTK----CSIVKCISVERGLDEKVCLRPP 513
P V K C I + +E +C+R P
Sbjct: 144 KPIPVNKLAEYCQIHHSTGNKSFKEEFMCIRTP 176
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 211 KTNSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEG--IGTDERVDDVPVSAKE 372
KTN S + +++S + SE + D L ++DEG G DE + D P AKE
Sbjct: 163 KTNGSASDEDEESNNDSVSKKKSEDSTPDVLESTDDEGDKKGGDEHLSDAP--AKE 216
>SB_50029| Best HMM Match : TP2 (HMM E-Value=0.15)
Length = 303
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +1
Query: 193 RRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEGIGTDERVDDVPVSAKE 372
++R + + ND KE D E +D + ++EG G D+ +D+ V+ +E
Sbjct: 161 KKRSIFPKRALADIHNDTPKEIED--KDYEPDGEDEDEDEDNEGCGNDDEDNDIDVTDEE 218
Query: 373 MELVGLIETL 402
EL+ ETL
Sbjct: 219 DELMMKAETL 228
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +1
Query: 133 PLCPSEMEDPGSGGGPSCFQRR---RPLMKTNSSPAASNDDSKERRRGRSDSETLSDDPL 303
P S MED + S + R +P K +P+ D+K++ R ++DS+ SDD
Sbjct: 774 PRRSSHMEDSSANRSISPVKERASSKPSEKAMEAPSGKAPDTKQKERKKTDSD--SDDD- 830
Query: 304 LESNDEGIGTDERVDD 351
ES++ DE D
Sbjct: 831 -ESSESDSSDDEDSSD 845
>SB_18221| Best HMM Match : HHH (HMM E-Value=0.65)
Length = 324
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 142 PSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKE 255
P E EDP SG PS ++RRPL ++ + +D S E
Sbjct: 128 PKEQEDPESGLEPS--KKRRPLKDSSPDKGSKSDPSFE 163
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = +1
Query: 124 SSNPLCPSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDPL 303
SSN L S+ ED P ++RR K S N +K+R++ DSE SDD
Sbjct: 1685 SSNSLSGSDGEDSADENPPK--KKRRSAEKDQDSEL-DNIFTKKRKKEDKDSEDESDDYT 1741
Query: 304 LESNDEGIGTDERVDD 351
+S+ D+ D
Sbjct: 1742 RQSSPSDDDDDDENGD 1757
>SB_9427| Best HMM Match : DUF1049 (HMM E-Value=1.6)
Length = 167
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 142 PSEMEDPGSGGGPSCFQRRRPLMKTNSSPAA 234
PS + PGSGG P + ++ ++ SPAA
Sbjct: 135 PSTQQQPGSGGYPMMYPQQPGVLPCRDSPAA 165
>SB_50607| Best HMM Match : Vicilin_N (HMM E-Value=0.88)
Length = 385
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 274 DSETLSDDPLLESNDEGIGTDERVDDVPVSAKEMELVGLIETL 402
D E +D + ++EG G D+ +D+ V+ +E EL ETL
Sbjct: 304 DYEPDGEDEDEDEDNEGCGNDDEDNDIDVTDEENELTMKAETL 346
>SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11)
Length = 834
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 274 DSETLSDDPLLESNDEGIGTDERVDDVPVSAKEMELVGLIETL 402
D E +D + ++EG G D+ +D+ V+ +E EL ETL
Sbjct: 310 DYEPDGEDEDEDEDNEGCGNDDEDNDIDVTDEENELTMKAETL 352
>SB_25237| Best HMM Match : Phage_integrase (HMM E-Value=0.2)
Length = 845
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 274 DSETLSDDPLLESNDEGIGTDERVDDVPVSAKEMELVGLIETL 402
D E +D + ++EG G D+ +D+ V+ +E EL ETL
Sbjct: 310 DYEPDGEDEDEDEDNEGCGNDDEDNDIDVTDEENELTMKAETL 352
>SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1318
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 121 GSSNPLCPSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGR-SDSETLSDD 297
GSS+ P P S P+ +QR P+ ++S+P +S +S R S S T++ +
Sbjct: 32 GSSSEPLPRRPPVPVSYELPASYQRSVPVSTSSSTPVSSPSNSTPSTPIRKSSSVTVTLN 91
Query: 298 PLLESNDEGIGTDERVDDVPVSAKE 372
+ G G + R D + S E
Sbjct: 92 RRISRESCGSGRESR-DSIDASMNE 115
>SB_45314| Best HMM Match : GRP (HMM E-Value=4.8)
Length = 123
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +1
Query: 163 GSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEGIGTD 336
G GG P R L N++ NDD+ G D + DDP + D+ + D
Sbjct: 34 GGGGAPHPPSPFRRLCNGNNN--VENDDNDNDDDGGDDDDDKDDDPNDDDEDDNVNGD 89
>SB_21889| Best HMM Match : Mak16 (HMM E-Value=3.8)
Length = 336
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +1
Query: 214 TNSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEGIGTDERVDDVPVSAKEMELVGLI 393
+ SSPA +D G + E ++EG G D+ +D+ V+ +E EL+
Sbjct: 241 STSSPAEEIEDKDYEPDGEDEDEN--------EDNEGCGNDDEDNDINVTDEEDELMMKA 292
Query: 394 ETL 402
ETL
Sbjct: 293 ETL 295
>SB_4468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1513
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 298 PLLESN--DEGIGTDERVDDVPVSAKEMELVGLIE-TLDVPQTTLCSPSGVTKCSIVKCI 468
PL E+N DEGI + DD P SA ++ T D PQ +P +T +
Sbjct: 477 PLAETNEFDEGISSKADTDDTPRSAPSSNSEANVDITSDRPQAQEFAPIHLTIAPV---- 532
Query: 469 SVERGLDEKVCLRPPTL 519
E ++ KV +R P +
Sbjct: 533 -QEAEVEAKVVVRGPRI 548
>SB_540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 211 KTNSSPAASNDDSKERRRGRSDSETLSDD 297
K + SP+AS DS++R +G+ S +DD
Sbjct: 69 KRHHSPSASESDSEKRPKGKEKSRKDADD 97
>SB_48876| Best HMM Match : Vicilin_N (HMM E-Value=0.11)
Length = 320
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +1
Query: 214 TNSSPAASNDDSKERRRGRSDSETLSDDPLLESNDEGIGTDERVDDVPVSAKEMELVGLI 393
+ SSPA +D G + E ++EG G D+ +D+ V+ +E EL+
Sbjct: 191 STSSPAEEIEDKDYEPDGEDEDEN--------EDNEGCGNDDEDNDINVTDEEDELMMKA 242
Query: 394 ETL 402
ETL
Sbjct: 243 ETL 245
>SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2014
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 244 DSKERRRGRSDSETLSDDPLLESND-EGIGTDERVDDVPVSA 366
+SK+ R SET D + ND EGI E+ DV S+
Sbjct: 395 ESKKNRNSNCQSETRKSDGIQNGNDVEGISKLEKQSDVVSSS 436
>SB_23780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 115 RCGSSNPLCPSEMEDPGSGGG-PSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDS-ETL 288
R G++ PL E +G P +PL N+ P N ++K R G ++S T+
Sbjct: 77 RTGNNEPLRTVNNESLRTGNNEPLRNVNNKPLRTGNNEP-LRNVNNKPLRTGNNESLRTV 135
Query: 289 SDDPLLESNDEGIGT 333
+++PL N++ + T
Sbjct: 136 NNEPLRAVNNQPLRT 150
>SB_51487| Best HMM Match : wnt (HMM E-Value=1.1e-08)
Length = 186
Score = 27.9 bits (59), Expect = 8.2
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 1/92 (1%)
Frame = +1
Query: 178 PSCFQRRRPLMKTNSSPAASNDDSKERRRGRSDSETLSDDP-LLESNDEGIGTDERVDDV 354
P + RR L+ SP + D+K+ G E SD P LE D RV+
Sbjct: 93 PLTKKARRSLVFLKPSPDYCHRDTKKGSTGVLGRECSSDSPNYLECIQMCTSCDYRVEKK 152
Query: 355 PVSAKEMELVGLIETLDVPQTTLCSPSGVTKC 450
++V L++ ++ V KC
Sbjct: 153 LACCSSQDVVNLLQCCNIKSCECKKLVAVAKC 184
>SB_36835| Best HMM Match : AMP-binding (HMM E-Value=6.2e-13)
Length = 874
Score = 27.9 bits (59), Expect = 8.2
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Frame = +1
Query: 277 SETLSDDPLLESNDEGIGTDERVDDVPVSAKEMELVGLIETLDVPQTTLCSPS-GVT--- 444
SE L DD D I E + +P S+ M + + + VP T S GV
Sbjct: 154 SELLEDDGTCLPTDLSIKPREDIAALPYSSYGMTELSPVSHV-VPLDTYNPKSVGVLLPN 212
Query: 445 -KCSIVKCIS---VERGLDEKVCLRPPTLL 522
+C I+ S VE+G + ++C+R PT++
Sbjct: 213 LECKIIDLSSGEEVEQGKEGEICIRGPTVM 242
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +1
Query: 142 PSEMEDPGSGGGPSCFQRRRPLMKTNSS--PAASNDDSKERRRGRSDSETLSDDPLLESN 315
P D P + + + + N S P + N ++ + G D + DD + N
Sbjct: 542 PKGETDKAEESQPIASENKTDIAEENQSDVPESGNSENDDDDDGDGDDDDDDDDGGDDDN 601
Query: 316 DEGIGTDERVDD 351
D+ G D+ DD
Sbjct: 602 DDDGGDDDNDDD 613
>SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 71 SRRRDTVQWRVLDLRDAVPV 130
+RRRDT+ W ++DLR A V
Sbjct: 252 TRRRDTIPWLMVDLRKAKTV 271
>SB_15954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 130 NPLCPSEMEDPGSGGGPSCFQRRRPLMKTNSSPAASNDDSKERRRGRSD 276
N L S++E G +R+R + N+SP A +E R R++
Sbjct: 63 NTLDESKLEGAWQSGTDLTERRKRHFVSCNTSPVAGESQGREGLRARAE 111
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.135 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,016,894
Number of Sequences: 59808
Number of extensions: 379894
Number of successful extensions: 1303
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1298
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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